ID: uc002iaq.2_intron_7_0_chr17_40817846_f
GENE: (8)
chr17:40817796-40818154+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(6)
B-CELL 		(5)
BRAIN 		(18)
BREAST 		(39)
CELL-LINE 		(9)
CERVIX 		(4)
HEART 		(2)
HELA 		(1)
KIDNEY 		(9)
LIVER 		(2)
OTHER 		(2)
RRP40.ip 		(21)
SKIN 		(1)
TESTES 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
GGCTCCACTTCCTCATGACCGGCTACACCCCGCTCACTACAGACCAGTCAGTAAGAGCAGCCTTCAGTGTCCCAGGCCAGGCTGGCCCTGGGCCCAGCAGGCCCTGCCCCAGCCTTTCTCTCTTCCCCACTGCCCCAGGAGCTGCCCTTTGCAGGCCCCAAGGCACTGCGCTCAGGGACTGGCACAGAGCGGGCGACTTTCTTGCTGACTTTCTCTCCACCCTCCCTCTGCCTTTGGCTTCTGCCAAAGAGAAGCCAAAGGGACTGTGCCCTGAGCGCTGGCCGGGTCCCTGTCTCACTGTCCCATCAGGTGGCCAGCGTGAGGAAGACCACGGTCCTGGATGTCATGAGGCGGCTGCT
.....................................................................................................................................(((..((((........(((((((....))).)))))))).)))...(((((((....(((((.....)))))........................((((((((((((.......))))))))))))..))))))).........................................................................................
...........................................................................................................................124..................................................................................................................................................273....................................................................................
SizePerfect hitTotal NormPerfect NormSRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189787SRR189784SRR189786SRR037937(GSM510475)
293cand2. (cell line)		SRR189782SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040037(GSM532922)
G243T. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR343335GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029124(GSM416753)
HeLa. (hela)		GSM532878(GSM532878)
G691T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR037938(GSM510476)
293Red. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR040043(GSM532928)
G428T. (cervix)		SRR029131(GSM416760)
MCF7. (cell line)		SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM532885(GSM532885)
G850N. (cervix)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191452(GSM715562)
178genomic small RNA (size selected RNA from . (breast)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		GSM416733(GSM416733)
HEK293. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR029127(GSM416756)
A549. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................................................................ACTGCCCCAGGAGCTGCTGGT..................................................................................................................................................................................................................2187.000.00-7.0019.0014.008.009.00------2.002.00-1.00---2.00---1.00--2.00-2.00---1.00-1.001.00----------------1.00-------1.00---1.00------1.001.00-1.00-1.00-1.001.001.001.00-1.00--1.00------1.001.00--------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTGGA..................................................................................................................................................................................................................2117.000.00-3.001.002.002.002.00------2.00------------1.00-----1.00------------1.00--------------1.00----------------------1.00--------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTGG...................................................................................................................................................................................................................2013.000.00-1.002.00-2.002.00---------------1.00----------1.002.00-1.00----1.00--------------------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGCTGG...................................................................................................................................................................................................................22211.001.00--0.50--0.50-------0.500.500.500.50--0.50-----0.50-----0.50--1.00-0.50----0.50------------0.50------1.001.00--------------------------------------------------0.50-0.50--0.50----0.50---
................................................................................................................................ACTGCCCCAGGAGCTGCTGGC..................................................................................................................................................................................................................2110.000.00-3.005.00--1.00-------------------------------1.00-----------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTG....................................................................................................................................................................................................................198.000.00--1.00-2.001.00-1.00-------------------------------------------------------1.00--1.00--------------------1.00---------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCGGT..................................................................................................................................................................................................................217.000.00-3.00-2.001.001.00-------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGCTG....................................................................................................................................................................................................................2127.001.00--0.50--1.00-----0.50--------0.50----------0.50------------0.501.50----------------------------------------------------0.50--0.50--------------0.50---0.50------
................................................................................................................................ACTGCCCCAGGAGCTGCTGGG..................................................................................................................................................................................................................216.000.00-1.00-------------1.00-1.00------------1.00----------1.00-------------1.00-----------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCGGTT.................................................................................................................................................................................................................225.000.00-1.00-4.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCGG...................................................................................................................................................................................................................204.000.00-3.00-1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTTGT..................................................................................................................................................................................................................214.000.00---1.003.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGCTGA...................................................................................................................................................................................................................2222.501.00-----1.00--------0.500.50-----------------------0.50---------------------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGCTGGT..................................................................................................................................................................................................................2322.501.00-----------------0.50-----------------------------0.50----------------------------------------------------------0.50---0.50---0.50------------
................................................................................................................................ACTGCCCCAGGAGCTGCCGGC..................................................................................................................................................................................................................212.000.00-2.00-----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGATGG...................................................................................................................................................................................................................222.000.00----2.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGCT.....................................................................................................................................................................................................................2022.001.00------------------------------------0.50------0.50---------------------------------------------------------------------------0.50----0.50--
..............................................................................................................................CCACTGCCCCAGGAGCTGCCGG...................................................................................................................................................................................................................222.000.00---2.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCGGA..................................................................................................................................................................................................................212.000.00-1.00-1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCAGGT..................................................................................................................................................................................................................212.000.00-----1.00-------1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCTGT..................................................................................................................................................................................................................212.000.00-1.001.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................CACTGCCCCAGGAGCTGCTGG...................................................................................................................................................................................................................212.000.00----2.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCT.....................................................................................................................................................................................................................182.000.00--------------------1.00-----------------------------------------------1.00----------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTGA...................................................................................................................................................................................................................202.000.00--1.00---------1.00------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCGGG..................................................................................................................................................................................................................212.000.00-1.001.00----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGCTGGA..................................................................................................................................................................................................................2321.501.00-----------------0.50-------------------------------------------------------------------------------------------------------0.50---0.50-
..............................................................................................................................CCACTGCCCCAGGAGCTGCTGT...................................................................................................................................................................................................................2221.501.00-------------------------------------------------------------------------------------0.50---------------------0.50---0.50---------------
................................................................................................................................ACTGCCCCAGGAGCTGCCCGAAT................................................................................................................................................................................................................231.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCAGGA.................................................................................................................................................................................................................221.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTTGG..................................................................................................................................................................................................................211.000.00----1.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCGGCT.................................................................................................................................................................................................................221.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGGAA....................................................................................................................................................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................GCCAAAGGGACTGTGCCCTGAGCGCTGG..............................................................................2811.001.00---------------------------------------------------1.00---------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTGT...................................................................................................................................................................................................................201.000.00----1.00--------------------------------------------------------------------------------------------------------------------------
.............CATGACCGGCTACACTCCT.......................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------1.00---------------------------------------------------------------------------------------------------
.......................................CAGACCAGTCAGTAAGAGC.............................................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------------1.00------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCAGGG..................................................................................................................................................................................................................211.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTTG...................................................................................................................................................................................................................201.000.00--------------1.00----------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTT....................................................................................................................................................................................................................191.000.00---------------------------1.00---------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................AGAAGCCAAAGGGACTGTGC..........................................................................................2011.001.00--------------------------------------1.00----------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCGGGT.................................................................................................................................................................................................................221.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGTGG....................................................................................................................................................................................................................191.000.00-----1.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CACTGCGCTCAGGGACTGGCACAGAGCGGGCAA...................................................................................................................................................................331.000.00---------------------1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGATGG...................................................................................................................................................................................................................201.000.00----1.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCCGC......................................................................................................................................................................................................................191.000.00-----1.00-------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTGC...................................................................................................................................................................................................................201.000.00--------------1.00----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................ACCACGGTCCTGGATGTCATGAGGCGGCCG..301.000.00------------------------------------------1.00------------------------------------------------------------------------------------
.......CTTCCTCATGACCGGCTACAACC.........................................................................................................................................................................................................................................................................................................................................231.000.00----------------------1.00--------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................AGGGACTGTGCCCTGAGCGCTGGAA............................................................................251.000.00------------------------------------1.00------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTCCTA....................................................................................................................................................................................................................191.000.00----1.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCCGAA.................................................................................................................................................................................................................221.000.00---1.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................CCTGGATGTCATGAGGCGGT....201.000.00----------------1.00--------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTTGA..................................................................................................................................................................................................................211.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................AGCGTGAGGAAGACCACGGTCCTGGATGCC..............301.000.00------------------------1.00------------------------------------------------------------------------------------------------------
..........................................................................................................................................GAGCTGCCCTTTGCAGCACT.........................................................................................................................................................................................................201.000.00------------------------------1.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AGGGACTGGCACAGAGCGG.......................................................................................................................................................................1911.001.00---------------------------------------------------------1.00---------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGC......................................................................................................................................................................................................................1921.001.00-------------0.50-----------------------------------------------------------------------------------------------0.50-----------------
................................................................................................................................ACTGCCCCAGGAGCTGCTCGC..................................................................................................................................................................................................................211.000.00--1.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................CACTGCCCCAGGAGCTGCTGGT..................................................................................................................................................................................................................221.000.00-----------------1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CCAAGGCACTGCGCTCAGGGACTGGC................................................................................................................................................................................2611.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGGAT....................................................................................................................................................................................................................191.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................AAGGCACTGCGCTCAGGG......................................................................................................................................................................................1811.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................AAGAGAAGCCAAAGGCCA...............................................................................................181.000.00----------------------------------------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................................CTGCGCTCAGGGACTGGCACAGAGCGG.......................................................................................................................................................................2711.001.00--------------------------------------1.00----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................ACCCTCCCTCTGCCTTTGGCTTCCGCC..................................................................................................................271.000.00------------------------1.00------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTAGT..................................................................................................................................................................................................................211.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCGGGA.................................................................................................................................................................................................................221.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................CAGGGACTGGCACAGAGCGGGCA....................................................................................................................................................................231.000.00-------------------------------------------------------------------1.00-----------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTTTC..................................................................................................................................................................................................................211.000.00----1.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCCTGC..................................................................................................................................................................................................................211.000.00---1.00---------------------------------------------------------------------------------------------------------------------------
....CCACTTCCTCATGACCGGCTACAACC.........................................................................................................................................................................................................................................................................................................................................261.000.00----------------------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TCTCCACCCTCCCTCTGTC...............................................................................................................................191.000.00-------------------------------------1.00-----------------------------------------------------------------------------------------
................................................................................................................................ACTGCCCCAGGAGCTGCTGTC..................................................................................................................................................................................................................211.000.00-----1.00-------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGCTTGG..................................................................................................................................................................................................................2320.501.00----0.50--------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CGGTCCTGGATGTCATGAGGCG......2220.500.50----------------------0.50--------------------------------------------------------------------------------------------------------
......ACTTCCTCATGACCGGCTACACCCC........................................................................................................................................................................................................................................................................................................................................2520.500.50----------------------------------------------0.50--------------------------------------------------------------------------------
........TTCCTCATGACCGGCTACACCCC........................................................................................................................................................................................................................................................................................................................................2320.500.50------------------------------------------0.50------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................GTCCTGGATGTCATGAGGCGGCTG..2420.500.50------------------------------------------------------0.50------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CGGTCCTGGATGTCATGAGGCGGC....2420.500.50---------------------------------------------------------------------------------------------------0.50---------------------------
........................................................................................................................................................................................................................................................................................................................GCCAGCGTGAGGAAGACCACGG.........................2220.500.50-------------------------------------------------------------------------------------0.50-----------------------------------------
.GCTCCACTTCCTCATGACCGGCTACA............................................................................................................................................................................................................................................................................................................................................2620.500.50----------------------------------------0.50--------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TGTCATGAGGCGGCTGCT1820.500.50------------------------------------------------------------------------------------------------------0.50------------------------
.............................................................................................................................................................................................................................................................................................................................CGTGAGGAAGACCACGGTCCTGGATGT...............2720.500.50------------------------------------------------------------------------------------------------0.50------------------------------
...................................................................................................................................................................................................................................................................................................................................................GATGTCATGAGGCGGCT...1720.500.50--------------------------------------------------0.50----------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGCTGTG..................................................................................................................................................................................................................2320.501.00------------------------------------------------------------------------------------------------------------0.50------------------
.............................................................................................................................................................................................................................................................................................................................................GTCCTGGATGTCATGAGGCGGCTGC.2520.500.50-----------0.50-------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................CTGGATGTCATGAGGCGG.....1820.500.50-----------0.50-------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGCGG....................................................................................................................................................................................................................2120.501.00---0.50---------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCACTGCCCCAGGAGCTGCTGTT..................................................................................................................................................................................................................2320.501.00-------------------------------------------------------------------------------------------------------0.50-----------------------
...........CTCATGACCGGCTACACC..........................................................................................................................................................................................................................................................................................................................................1820.500.50----------------------------------------------------------------------------------------------------------------0.50--------------
.....................................................................................................................................................................................................................................................................................................................................AGACCACGGTCCTGGATGTCATGAGGC.......2720.500.50-------------------------0.50-----------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................GCGTGAGGAAGACCACGGTCCT.....................2220.500.50-------0.50-----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................ACGGTCCTGGATGTCATGAGGCGGCTGCT2920.500.50-----------0.50-------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................GCGTGAGGAAGACCACGGTCCTGGATGTCATGA..........3320.500.50-----------0.50-------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................ACGGTCCTGGATGTCATGAGGCGGC....2520.500.50---------------------0.50---------------------------------------------------------------------------------------------------------
.....CACTTCCTCATGACCGGCTACACC..........................................................................................................................................................................................................................................................................................................................................2420.500.50---------------------------------------------------------------------------------------------------------0.50---------------------
.............................................................................................................................................................................................................................................................................................................................CGTGAGGAAGACCACGGTCCTGGATGTCATG...........3120.500.50---------------------------------------------------------------------------------------------------------------------0.50---------
...........................................................................................................................................................................................................................................................................................................................................CGGTCCTGGATGTCATGAGGC.......2120.500.50-----------0.50-------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................GGTCCTGGATGTCATGAGGCG......2120.500.50--------------------------------------------------0.50----------------------------------------------------------------------------
.......................................................................................................................CTCTTCCCCACTGCCCCAGGA...........................................................................................................................................................................................................................2130.330.33------------------------------------------------------------------------------------------------------------------------------0.33

Antisense strand
GGCTCCACTTCCTCATGACCGGCTACACCCCGCTCACTACAGACCAGTCAGTAAGAGCAGCCTTCAGTGTCCCAGGCCAGGCTGGCCCTGGGCCCAGCAGGCCCTGCCCCAGCCTTTCTCTCTTCCCCACTGCCCCAGGAGCTGCCCTTTGCAGGCCCCAAGGCACTGCGCTCAGGGACTGGCACAGAGCGGGCGACTTTCTTGCTGACTTTCTCTCCACCCTCCCTCTGCCTTTGGCTTCTGCCAAAGAGAAGCCAAAGGGACTGTGCCCTGAGCGCTGGCCGGGTCCCTGTCTCACTGTCCCATCAGGTGGCCAGCGTGAGGAAGACCACGGTCCTGGATGTCATGAGGCGGCTGCT
.....................................................................................................................................(((..((((........(((((((....))).)))))))).)))...(((((((....(((((.....)))))........................((((((((((((.......))))))))))))..))))))).........................................................................................
...........................................................................................................................124..................................................................................................................................................273....................................................................................
SizePerfect hitTotal NormPerfect NormSRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189787SRR189784SRR189786SRR037937(GSM510475)
293cand2. (cell line)		SRR189782SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040037(GSM532922)
G243T. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR343335GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029124(GSM416753)
HeLa. (hela)		GSM532878(GSM532878)
G691T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR037938(GSM510476)
293Red. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR040043(GSM532928)
G428T. (cervix)		SRR029131(GSM416760)
MCF7. (cell line)		SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM532885(GSM532885)
G850N. (cervix)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191452(GSM715562)
178genomic small RNA (size selected RNA from . (breast)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		GSM416733(GSM416733)
HEK293. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR029127(GSM416756)
A549. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................................................................................................................................CTGACTTTCTCTCCATTCC........................................................................................................................................ 1954.000.0014.00-----7.0011.00-7.006.00-------3.00----1.00-------------------1.00----1.00----1.00---------------1.001.00--------------------------------------------------------
............................................................................................................................................................................................................CTGACTTTCTCTCCATTC......................................................................................................................................... 1841.000.0015.00-----11.00-6.002.00-------------------2.00-----------------1.00-----------------1.00-------1.00---1.00------1.00------------------------------------------
............................................................................................................................................................................................................CTGACTTTCTCTCCATT.......................................................................................................................................... 1724.000.0012.00-----4.002.004.00-----------------------------------------------1.00----------------------------------1.00-----------------------------------
.....................................................................................................................................................................................................................................................................................GTGAGACAGGGACCCGGCCAG............................................................. 2121.501.50----------------1.50--------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................CGCTGGCCACCTGATGG........................................ 1711.001.00--------------------------------------------------------------------------------------------1.00----------------------------------
............................................................................................................................................................................................................CTGACTTTCTCTCCATTCA........................................................................................................................................ 191.000.00---------------------------------------------------------------------------1.00---------------------------------------------------
..................................................................................................................................................................................................................TTCTCTCCACCCTCCCTC................................................................................................................................... 181.000.00----------------------------------------------------------1.00--------------------------------------------------------------------
...................................................................................................................................................................................................ACTTTCTTGCTGACTTTCTCTCTA............................................................................................................................................ 241.000.00-------------------------------------------------1.00-----------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................CGCTGGCCGGGTCCCTGT.................................................................. 181.000.00---------------------------------------1.00---------------------------------------------------------------------------------------
........................................................................................................TGCCCCAGCCTTTCTTTAA............................................................................................................................................................................................................................................ 191.000.00--------------------1.00----------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................CTGACTTTCTCTCCATTT......................................................................................................................................... 181.000.00--------1.00----------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................CTGACTTTCTCTCCATTCT........................................................................................................................................ 191.000.001.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................CTGACTTTCTCTCCAATC......................................................................................................................................... 181.000.001.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................CTGACTTTCTCTCCATTTC........................................................................................................................................ 191.000.00----------1.00--------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................GCTGACTTTCTCTCCATCA......................................................................................................................................... 191.000.00-----1.00-------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................GCTGACTTTCTCTCCACC.......................................................................................................................................... 181.000.00-------1.00-----------------------------------------------------------------------------------------------------------------------
............................................................................................................CCAGCCTTTCTCTCTTTTT........................................................................................................................................................................................................................................ 191.000.00-----------------------------------------------------------------------------------------1.00-------------------------------------
.........................................CACTGAAGGCTGCTCTTACTGACTGGTC.................................................................................................................................................................................................................................................................................................. 2821.001.00----------------------------------------------------------------------------------------1.00--------------------------------------
............................................................................................................................................................................................................CTGACTTTCTCTCCATTGC........................................................................................................................................ 191.000.001.00------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................GCTGACTTTCTCTCCATGCT........................................................................................................................................ 201.000.00-------1.00-----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................CAGTGAGACAGGGACCCG........................................................... 1820.500.50--------------------------------------------------------------------------------------------------------0.50----------------------
...............................................................................................................TCCTGGGGCAGTGGGGAAGAGAGAAAGGC........................................................................................................................................................................................................................... 2920.500.50-------------------------------------------------------------------------------------------------0.50-----------------------------
...............................................................................................................CCTGGGGCAGTGGGGAAGAGAGAAAGGC............................................................................................................................................................................................................................ 2820.500.50-----------------------------------------------------------------------------------------------0.50-------------------------------
...............................................................................................................GGGGCAGTGGGGAAGAGAGAAAGGC............................................................................................................................................................................................................................... 2520.500.50--------------------------------------------------------------------------------------------------------------------------0.50----
...............................................................................................................CTGGGGCAGTGGGGAAGAGAGAAAGGC............................................................................................................................................................................................................................. 2720.500.50----------------------------------------------------------------------------------------------------0.50--------------------------
......................................................................................................................TGGGGCAGTGGGGAAGAGA.............................................................................................................................................................................................................................. 1930.330.33-----------------------------------------------------------------------------------------------0.33-------------------------------
...............................................................................................................GTGGGGAAGAGAGAAAGGC..................................................................................................................................................................................................................................... 1930.330.33------------------------------------------------0.33------------------------------------------------------------------------------
...............................................................................................................GGGGAAGAGAGAAAGGC....................................................................................................................................................................................................................................... 1770.140.14-----------------------0.14-------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................TTCCTCACGCTGGCC................................. 1590.110.11------------------------0.11------------------------------------------------------------------------------------------------------