ID: uc002hhr.2_intron_0_0_chr17_31255256_f.5p
GENE: (1)
chr17:31255206-31255455+


(1)
AGO2.ip 		(1)
B-CELL 		(1)
BRAIN 		(6)
BREAST 		(14)
CELL-LINE 		(9)
CERVIX 		(2)
HEART 		(2)
HELA 		(2)
LIVER 		(2)
OTHER 		(26)
SKIN 		(1)
UTERUS

Sense strand
TTGCCATCGGCGGGGCAGTCGCGGGATGCGCCCGGGAGCCACAGCCTGAGGTGGGTGAGCCCCGCCGGGCCGGGCGGGCCGCGGCGAGTCGGGGAAGGGGACGCGGGGGCGCGGGGCCTGGCCCGGCTGCCGGGGAGAGGGGAGGCGGGTGCCGCAGCTTTGTTCTTGCCGCGGGGCCGCGCGCCCGAAGTTGGGGAAAGGAGTAGGAGCCGCGCCCCGGAGCGCTCCGGGGCCCGTGCGGCGCGTCCCG
...........................................................((((((((((((((((...((.(((....))).)).......((((....))))..))))))))))))....))))...................................................................................................................
..................................................51........................................................................................141...........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189782TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM532877(GSM532877)
G691N. (cervix)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532871(GSM532871)
G652N. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040036(GSM532921)
G243N. (cervix)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037931(GSM510469)
293GFP. (cell line)		TAX577739(Rovira)
total RNA. (breast)		GSM532890(GSM532890)
G576T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM359191(GSM359191)
HepG2_3pM_5. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR029129(GSM416758)
SW480. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
...........................................................CCCCGCCGGGCCGGGGA..............................................................................................................................................................................1753.000.0038.0012.00-2.001.00--------------------------------------------------------------
...........................................................CCCCGCCGGGCCGGGGG..............................................................................................................................................................................178.000.004.003.00----------------------------1.00------------------------------------
...........................................................CCCCGCCGGGCCGGGGGA.............................................................................................................................................................................184.000.003.001.00-----------------------------------------------------------------
............................................................CCCGCCGGGCCGGGCGC.............................................................................................................................................................................1712.001.002.00------------------------------------------------------------------
................................................................CCGGGCCGGGCGGGCCGCG.......................................................................................................................................................................1912.002.00--------------------------1.00----1.00-----------------------------------
......................................................................................................................................................................................................................CCCCGGAGCGCTCCGTCGG.................192.000.00--2.00----------------------------------------------------------------
................................................................................................................................GCCGGGGAGAGGGGAGCG........................................................................................................181.000.00-------------------------------------1.00-----------------------------
......................................................................................................................................................................................................................CCCCGGAGCGCTCCGTCG..................181.000.00--1.00----------------------------------------------------------------
................................................................................................................................................................................................................................CTCCGGGGCCCGTGCCAG........181.000.00---------------1.00---------------------------------------------------
...............................................................................................................................................................................................................................GCTCCGGGGCCCGTGCCGG........191.000.00-------------------------------------------1.00-----------------------
......................................................................................................................................................................................................................CCCCGGAGCGCTCCGCCGG.................191.000.00--1.00----------------------------------------------------------------
..........CGGGGCAGTCGCGGGATGCGC...........................................................................................................................................................................................................................2111.001.00----------------------------------------1.00--------------------------
.....................................................................CCGGGCGGGCCGCGGCGT...................................................................................................................................................................181.000.00-------1.00-----------------------------------------------------------
..........................................................GCCCCGCCGGGCCGGGGCG.............................................................................................................................................................................191.000.00-1.00-----------------------------------------------------------------
..............................................................................................................................................................................................................................CGCTCCGGGGCCCGTGCT..........181.000.00-----------------------------1.00-------------------------------------
..............................CCCGGGAGCCACAGCCTGAGG.......................................................................................................................................................................................................2111.001.00--------------------------------------------1.00----------------------
............................................................CCCGCCGGGCCGGGCG..............................................................................................................................................................................1611.001.001.00------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGCGCTCCGGGGC.................1520.500.50-----------0.50-------------------------------------------------------
..............................................................................................................GCGGGGCCTGGCCCGGCTGGGCG.....................................................................................................................231.000.00------1.00------------------------------------------------------------
.........................................................................................................................................................................................CGAAGTTGGGGAAAGGAGTAGGAGCTCTG....................................291.000.00-----------------1.00-------------------------------------------------
.........................................................................................................................................................................CGCGGGGCCGCGCGCGAC...............................................................181.000.00-------1.00-----------------------------------------------------------
....................................................................GCCGGGCGGGCCGCGCCG....................................................................................................................................................................181.000.00-------------------------1.00-----------------------------------------
.........................................................................................................................................................................CGCGGGGCCGCGCGCGAG...............................................................181.000.00------------------------1.00------------------------------------------
.........................................CAGCCTGAGGTGGGTGAGCC.............................................................................................................................................................................................2011.001.00---------------------------------------1.00---------------------------
..........................................................GCCCCGCCGGGCCGGGGG..............................................................................................................................................................................181.000.00-------------------1.00-----------------------------------------------
....................GCGGGATGCGCCCGGGAG....................................................................................................................................................................................................................1811.001.00------------------------------------------1.00------------------------
.................................................................CGGGCCGGGCGGGCCCGG.......................................................................................................................................................................181.000.001.00------------------------------------------------------------------
................AGTCGCGGGATGCGCCCGGGAGCCACAG..............................................................................................................................................................................................................2811.001.00-----------------------------------------1.00-------------------------
..........CGGGGCAGTCGCGGGATG..............................................................................................................................................................................................................................1811.001.00---------------------------------1.00---------------------------------
.........................................................................................CGGGGAAGGGGACGCGGCCCG............................................................................................................................................211.000.00----------------------1.00--------------------------------------------
.......................................................................................................................................................................................................................CCCGGAGCGCTCCGG....................1560.170.170.17------------------------------------------------------------------
..........................................................GCCCCGCCGGGCCGGGC...............................................................................................................................................................................1730.330.33--------------------------------------------------0.33----------------
...................................................................GGCCGGGCGGGCCGCGG......................................................................................................................................................................1750.200.20------------------------------------------------------0.20------------
.......................................................................................GTCGGGGAAGGGGAC....................................................................................................................................................1560.170.17----------------------------------------------------------------0.17--

Antisense strand
TTGCCATCGGCGGGGCAGTCGCGGGATGCGCCCGGGAGCCACAGCCTGAGGTGGGTGAGCCCCGCCGGGCCGGGCGGGCCGCGGCGAGTCGGGGAAGGGGACGCGGGGGCGCGGGGCCTGGCCCGGCTGCCGGGGAGAGGGGAGGCGGGTGCCGCAGCTTTGTTCTTGCCGCGGGGCCGCGCGCCCGAAGTTGGGGAAAGGAGTAGGAGCCGCGCCCCGGAGCGCTCCGGGGCCCGTGCGGCGCGTCCCG
...........................................................((((((((((((((((...((.(((....))).)).......((((....))))..))))))))))))....))))...................................................................................................................
..................................................51........................................................................................141...........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189782TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM532877(GSM532877)
G691N. (cervix)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532871(GSM532871)
G652N. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040036(GSM532921)
G243N. (cervix)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037931(GSM510469)
293GFP. (cell line)		TAX577739(Rovira)
total RNA. (breast)		GSM532890(GSM532890)
G576T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM359191(GSM359191)
HepG2_3pM_5. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR029129(GSM416758)
SW480. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
...................................................................GGCCGGGCGGGCCGCGCG..................................................................................................................................................................... 1857.000.0024.0022.00-4.002.00-------1.00-1.00--------1.00----------1.00-1.00------------------------------
...................................................................CCGCGGCCCGCCCGGCC...................................................................................................................................................................... 1753.003.001.600.20--------0.20-0.20---------------------------------0.200.20----0.20--------0.20-----
...................................................................CGCGGCCCGCCCGGCC....................................................................................................................................................................... 1652.802.800.400.40-0.20-0.20---0.20---0.20--------------------------------0.200.200.20--0.20----0.20------0.20---
.................................................................................................................................CCGGGGAGAGGGGAGGGGG...................................................................................................... 192.000.00---------1.00-------------------------1.00-------------------------------
...................................................................GGCCGGGCGGGCCGCGCGC.................................................................................................................................................................... 192.000.001.00-------------------1.00----------------------------------------------
.........................................................................................................................................................................................................................CGGAGCGCTCCGGGGTCGG.............. 192.000.00--2.00----------------------------------------------------------------
.....................................................................CCGGGCGGGCCGCGGGGC................................................................................................................................................................... 182.000.00-2.00-----------------------------------------------------------------
........................................................GAGCCCCGCCGGGCCGCGG............................................................................................................................................................................... 192.000.00-----2.00-------------------------------------------------------------
................................CGGGAGCCACAGCCTGATAG...................................................................................................................................................................................................... 201.000.00------1.00------------------------------------------------------------
.........................................................................................................................................................................CGCGGGGCCGCGCGCCCC............................................................... 181.000.00---------------------1.00---------------------------------------------
.........................ATGCGCCCGGGAGCCTGG............................................................................................................................................................................................................... 181.000.00---------------------------1.00---------------------------------------
..................................GGAGCCACAGCCTGAGGTTT.................................................................................................................................................................................................... 201.000.00--------------------------------1.00----------------------------------
...................................................................GGCCGGGCGGGCCGCACG..................................................................................................................................................................... 181.000.00----------------------------1.00--------------------------------------
....................................................................................................................................................GCGGCAAGAACAAAGCTGCGGCAC.............................................................................. 2411.001.00------------------1.00------------------------------------------------
.........................................................................................................................................................................................................................CGGAGCGCTCCGGGGTCG............... 181.000.00--1.00----------------------------------------------------------------
..................................................................................................GGACGCGGGGGCGCGGGTCCC................................................................................................................................... 211.000.00--------------------------------------1.00----------------------------
...........................................................CCCCGCCGGGCCGGGCGGGA........................................................................................................................................................................... 201.000.00-1.00-----------------------------------------------------------------
..................................................................GGGCCGGGCGGGCCGCGGA..................................................................................................................................................................... 191.000.00-1.00-----------------------------------------------------------------
............................................................................GGCCGCGGCGAGTCGGC............................................................................................................................................................. 171.000.00--------1.00----------------------------------------------------------
.....................................................................................................................................................................................................................GGAGCGCTCCGGGGC...................... 1520.500.50-----------0.50-------------------------------------------------------
....................................................................................................ACGCGGGGGCGCGGGGGGG................................................................................................................................... 191.000.001.00------------------------------------------------------------------
...................................................................GGCCGGGCGGGCCGCGGG..................................................................................................................................................................... 181.000.001.00------------------------------------------------------------------
.........................................................................................................................................................................................................................CGGAGCGCTCCGGGGCCGG.............. 191.000.00--1.00----------------------------------------------------------------
.........................................................................................................................................................................CGCGGGGCCGCGCGCCCGC.............................................................. 191.000.00----------1.00--------------------------------------------------------
...........................ACCTCAGGCTGTGGCTCCCGGGCGC...................................................................................................................................................................................................... 2511.001.00---------------------------------------------1.00---------------------
.........................................................................................................................................................................CGCGGGGCCGCGCGCCGCG.............................................................. 191.000.001.00------------------------------------------------------------------
..................................................................................................GGACGCGGGGGCGCGGTCCC.................................................................................................................................... 201.000.00----------------1.00--------------------------------------------------
..................................................................................................GGACGCGGGGGCGCGGGGTCCC.................................................................................................................................. 221.000.00-------------1.00-----------------------------------------------------
........................................................................................................................................................................CCGCGGGGCCGCGCGCG................................................................. 171.000.00-1.00-----------------------------------------------------------------
...................................................................GGCCGGGCGGGCCGCGG...................................................................................................................................................................... 170.600.00--------0.20--------------------------------------------------0.20--0.20----
...................................................................GGCCGGGCGGGCCGCGGC..................................................................................................................................................................... 180.600.00--------0.200.20---------------------------------------------0.20-----------
...................................................................GGCCGGGCGGGCCGCGGCGC................................................................................................................................................................... 200.600.00-----------0.20-------------------------------------0.40-----------------
...................................................................GGCCGGGCGGGCCGCGGG..................................................................................................................................................................... 1850.600.00-0.20----------------------------------------------0.20---------0.20--------
...................................................................GGCCGGGCGGGCCGCGGGC.................................................................................................................................................................... 1950.400.00-0.20----------------------------------------------------------0.20------
........................................................................................................................................................................................................................CCCGGAGCGCTCCGG................... 1560.170.170.17------------------------------------------------------------------
.........................................................................................GCGTCCCCTTCCCCG.................................................................................................................................................. 1580.250.25-----------------------------------------------------------------0.120.12
...................................................................GGCCGGGCGGGCCGCGGCG.................................................................................................................................................................... 190.200.00-----------------------------------------------------0.20-------------
...................................................................GGCCGGGCGGGCCGCGGAGC................................................................................................................................................................... 200.200.00---------------------------------------------------------0.20---------
.........................................................................................CGGGGAAGGGGACGCCCGT.............................................................................................................................................. 190.120.00----------------------------------------------0.12--------------------