ID: uc002fux.1_intron_9_0_chr17_2597859_r
GENE: KIAA0664(14)
chr17:2597809-2598200-


(1)
AGO1.ip 		(2)
AGO2.ip 		(5)
B-CELL 		(9)
BRAIN 		(9)
BREAST 		(15)
CELL-LINE 		(9)
CERVIX 		(5)
HEART 		(1)
HELA 		(12)
LIVER 		(2)
OTHER 		(18)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
AAGAACATCTGCCAGGAGGCCAAGAACTACTTTGACTTCGACCTCGAGTGGTGCGTGCGGGGCAGGGGCGGTGGGGTGGGTGGGATTGGGCAGATGAGGCGGCCACCACCTGCTCCCAGATGGCGTCTAAGGCCTGTGGTCATAGGCCAGGGAGTCAGAGAGAAGAGGGAGCAGCTGTGGAGATCACTGGGTGCTGGAGGGTGAGGGCAGCCGGGAGGCTCCCGGGGGCCGGGTGGGGCAGTGTTGGGGGCCCGGGCTGGACAGCGTTGGGGAGCTGGGTGGGGCGGTGTTGGGGGGGCCCGGCGGTGCTTGGGCTGCTCAGGCCCCCTGCTCCCTCCTCAGTGAGACCGTGGACCAGGCTGTGGAGACCTACGGCCTGCAGAAGATAACGC
.......................................................................................................................................................................................(((((.(((.((..((.((.....(((((.((..((((((((..(((......)))....)))))))))).)))))....)).))..)).))).))))).(((.(((((((....))))))).)))...................................................................................
....................................................................................................................................................................................181................................................................................................................................312..............................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM532876(GSM532876)
G547T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784TAX577580(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR040011(GSM532896)
G529T. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
.............................................................................................................................................................................................................................................................................................................................................................................AGACCTACGGCCTGCAGAAGAT.....2215.005.001.00------------1.00----1.00---1.00--------1.00--------------------------------------------------------
...................................................................................................................................................................................................................................................................................................GGGGGGGCCCGGCGGGC....................................................................................175.000.00-----------4.00--------------------------------------1.00-------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................CCGTGGACCAGGCTGTGGAGACCTAC...................2614.004.00-----4.00----------------------------------------------------------------------------------
.......TCTGCCAGGAGGCCAAGAACTA...........................................................................................................................................................................................................................................................................................................................................................................2214.004.00--4.00-------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................GGAGACCTACGGCCTGCAG..........1914.004.00--2.00----2.00--------------------------------------------------------------------------------
..........GCCAGGAGGCCAAGAACTACT.........................................................................................................................................................................................................................................................................................................................................................................2113.003.003.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................ACTGGGTGCTGGAGGCTT.............................................................................................................................................................................................183.000.00---1.00-1.00---------------------------------------------------------------------1.00------------
............................................................................................................................................................................................................................................................................................................................................................................GAGACCTACGGCCTGCAGAAGAT.....2313.003.002.001.00--------------------------------------------------------------------------------------
..........GCCAGGAGGCCAAGAACTACTTTGAC....................................................................................................................................................................................................................................................................................................................................................................2612.002.00------------------2.00---------------------------------------------------------------------
.AGAACATCTGCCAGGAGGCCAA.................................................................................................................................................................................................................................................................................................................................................................................2212.002.001.00---------------------------------------------1.00-----------------------------------------
.................................................................................................................................................................................................................................................................................................................................GGCCCCCTGCTCCCTCCTCAG..................................................2112.002.00---2.00------------------------------------------------------------------------------------
.................GGCCAAGAACTACTTTGACTTCG................................................................................................................................................................................................................................................................................................................................................................2312.002.00-1.00--------------------------1.00-----------------------------------------------------------
............................ACTTTGACTTCGACCTCGAG........................................................................................................................................................................................................................................................................................................................................................2012.002.00------------2.00---------------------------------------------------------------------------
.............AGGAGGCCAAGAACTACTT........................................................................................................................................................................................................................................................................................................................................................................1912.002.00------------------------------1.00----------1.00----------------------------------------------
................................TGACTTCGACCTCGAGTG......................................................................................................................................................................................................................................................................................................................................................1812.002.00------------2.00---------------------------------------------------------------------------
..........GCCAGGAGGCCAAGAACTACTTT.......................................................................................................................................................................................................................................................................................................................................................................2312.002.001.00---1.00-----------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................GTGGGGCGGTGTTGGGGGG...............................................................................................1912.002.00---2.00------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................TGGACCAGGCTGTGGAGAC.......................1912.002.00-----------------------------------------------------1.00---1.00------------------------------
.............AGGAGGCCAAGAACTACTTTG......................................................................................................................................................................................................................................................................................................................................................................2112.002.001.00---1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................ACTGGGTGCTGGAGGCTTT............................................................................................................................................................................................192.000.00----------------------------------------------------------------1.00---------------1.00-------
...................................................................................................................................................................................................................................................................................................GGGGGGGCCCGGCGGGGA...................................................................................182.000.00-----------------2.00----------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................GTGGAGACCTACGGCCTGCAGAAGAT.....2612.002.00-------1.00-------1.00------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................CCGTGGACCAGGCTGTGGAGA........................2112.002.00--2.00-------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TGTGGAGACCTACGGCCTGCAGA.........2312.002.00-------------------------------------------1.00---------------------------1.00----------------
.......TCTGCCAGGAGGCCAAGAACT............................................................................................................................................................................................................................................................................................................................................................................2112.002.001.00-------------1.00-------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................GGAGACCTACGGCCTGCAGAAGA......2312.002.00-------------1.00---------1.00----------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................AGGCCCCCTGCTCCCTCCTCAGT.................................................2312.002.00------------------------------------1.00--------------1.00------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................GAGACCTACGGCCTGCAGAAGATAACG.2712.002.001.00-----------------------------------------------------------------------1.00---------------
.....................................................................................................................................................................................................................................................................................................................................................GTGAGACCGTGGACCAGGCTGTGGA..........................2512.002.00-----2.00----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGGAGACCTACGGCCTGCA...........1911.001.00----------------------------------------------------------------------------------1.00-----
.............................................................................................................................................ATAGGCCAGGGAGTCAGAGAGAAGAGGG...............................................................................................................................................................................................................................2811.001.00--------------------------------------1.00-------------------------------------------------
.............................................................................................................................................................................................................................................GCAGTGTTGGGGGCCCGGGCTGGACAGCG..............................................................................................................................2911.001.00----------------------------1.00-----------------------------------------------------------
...................................................................................................................................................................................................................................................................................................GGGGGGGCCCGGCGGGCG...................................................................................181.000.00-----------------------------------------------------------------1.00----------------------
........................................................................................................................................................................................................................................................................................................................................................AGACCGTGGACCAGGCT...............................1711.001.00------------------------------------1.00---------------------------------------------------
........................AACTACTTTGACTTCGACCTCGAGT.......................................................................................................................................................................................................................................................................................................................................................2511.001.00------1.00---------------------------------------------------------------------------------
...........CCAGGAGGCCAAGAACTACTT........................................................................................................................................................................................................................................................................................................................................................................2111.001.001.00---------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................ACGGCCTGCAGAAGATAA...1811.001.00--------------------------------------------------------------------------1.00-------------
.................................................................................................................................................................................................................GCCGGGAGGCTCCCGGC......................................................................................................................................................................171.000.00------------------------------------------1.00---------------------------------------------
..........................................................................................................................................................TCAGAGAGAAGAGGGCACA...........................................................................................................................................................................................................................191.000.00-------------------1.00--------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGAGACCGTGGACCAGGCTGTGGAGAC.......................2711.001.00------1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................CTACGGCCTGCAGAAGATAACG.2211.001.00---------------------------------1.00------------------------------------------------------
...AACATCTGCCAGGAGGCCAAG................................................................................................................................................................................................................................................................................................................................................................................2111.001.001.00---------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................CGGTGTTGGGGGGGCGGG..........................................................................................181.000.00--------------------------------------------1.00-------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGAGACCGTGGACCAGGCTGTGGAG.........................2511.001.00------------------------1.00---------------------------------------------------------------
..............GGAGGCCAAGAACTACTTT.......................................................................................................................................................................................................................................................................................................................................................................1911.001.00-1.00--------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................GGAGACCTACGGCCTGCA...........1811.001.00----1.00-----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................AGCTGGGTGGGGCGGATC......................................................................................................181.000.00-------------------------------------------------------------------------------1.00--------
........................................................................................................................................................................GAGCAGCTGTGGAGATCACTGG..........................................................................................................................................................................................................2211.001.00----------------------------------------1.00-----------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TGTGGAGACCTACGGCCTGCAG..........2211.001.00--1.00-------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................AGCTGGGTGGGGCGGGCTC.....................................................................................................191.000.00-------------------------1.00--------------------------------------------------------------
.........TGCCAGGAGGCCAAGAACTA...........................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------1.00------------------------------------------------------------
......ATCTGCCAGGAGGCCAAG................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----1.00-----------------------------------------------------------------------------------
.....CATCTGCCAGGAGGCCAAGAACTA...........................................................................................................................................................................................................................................................................................................................................................................2411.001.00----------------------------------------------------1.00-----------------------------------
...............................................GTGGTGCGTGCGGGGTGG.......................................................................................................................................................................................................................................................................................................................................181.000.00----------------1.00-----------------------------------------------------------------------
.............AGGAGGCCAAGAACTACTTTGAC....................................................................................................................................................................................................................................................................................................................................................................2311.001.00--------------------------1.00-------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................AGACCGTGGACCAGGCTG..............................1811.001.001.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGGAGACCTACGGCCTGCAGAA........2211.001.00--------------------1.00-------------------------------------------------------------------
.......................................................................TGGGGTGGGTGGGATTGGTGGG...........................................................................................................................................................................................................................................................................................................221.000.00--------------------------------1.00-------------------------------------------------------
...............................................................AGGGGCGGTGGGGTGGGTGGT....................................................................................................................................................................................................................................................................................................................211.000.00----------------------------------1.00-----------------------------------------------------
...............................................................AGGGGCGGTGGGGTGAGC.......................................................................................................................................................................................................................................................................................................................181.000.00---------------1.00------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................CCTACGGCCTGCAGAA........1611.001.00--------1.00-------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................GGGGGGGCCCGGCGGGGAA..................................................................................191.000.00-----------------1.00----------------------------------------------------------------------
.......................................................TGCGGGGCAGGGGCGGCTCG.............................................................................................................................................................................................................................................................................................................................201.000.00---1.00------------------------------------------------------------------------------------
...................................................................................................................................................................AGAGGGAGCAGCTGTGGAGA.................................................................................................................................................................................................................2011.001.00----1.00-----------------------------------------------------------------------------------
...............................................................AGGGGCGGTGGGGTGGATTA.....................................................................................................................................................................................................................................................................................................................201.000.00---1.00------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................CCTGCTCCCTCCTCAGAAGA..............................................201.000.00-------------------------------------------------------------------1.00--------------------
..........GCCAGGAGGCCAAGAACTACTTTGA.....................................................................................................................................................................................................................................................................................................................................................................2511.001.00-------------------------------------------------------------------------1.00--------------
.....................................................................................................................................................................AGGGAGCAGCTGTGGAAATA...............................................................................................................................................................................................................201.000.00----1.00-----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................GGCCCCCTGCTCCCTCCTCAGTA................................................231.000.00-------------------------------------------------------1.00--------------------------------
.........................................................................................................................................................................................................................................................................................................................................................GACCGTGGACCAGGCTGTGGAGA........................2311.001.00------1.00---------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................AGACCGTGGACCAGGCTGTG............................2011.001.00--------------------------1.00-------------------------------------------------------------
..........................................................................................................................................................TCAGAGAGAAGAGGGTTCT...........................................................................................................................................................................................................................191.000.00-------------------------------------------------------------1.00--------------------------
...............................................................AGGGGCGGTGGGGTGGGTGGTT...................................................................................................................................................................................................................................................................................................................221.000.00---------------1.00------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................GGGGGGGCCCGGCGGGGTG..................................................................................191.000.00-----------------------------------------------1.00----------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................GACCTACGGCCTGCAGAA........1811.001.00---------------------------1.00------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................GACCGTGGACCAGGCTGTGGAGAC.......................2411.001.001.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................GACCGTGGACCAGGCTGTGGAG.........................2211.001.00--1.00-------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................ACCGTGGACCAGGCTGTGGAGACCTAC...................2711.001.00------1.00---------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................GTGGACCAGGCTGTGGAGACC......................2111.001.00----------------1.00-----------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................AGACCTACGGCCTGCAGAAG.......2011.001.00--------------------1.00-------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................GAGACCTACGGCCTGCAGAAGAA.....231.000.00--1.00-------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................ACGGCCTGCAGAAGATAAC..1911.001.001.00---------------------------------------------------------------------------------------
........CTGCCAGGAGGCCAAGAA..............................................................................................................................................................................................................................................................................................................................................................................1811.001.001.00---------------------------------------------------------------------------------------
.................................................................................................................................................................GAAGAGGGAGCAGCTATTT....................................................................................................................................................................................................................191.000.00---1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGGAGACCTACGGCCTGCAGA.........2111.001.00------------------------------------------------------------------------------1.00---------
.AGAACATCTGCCAGGAGGCCA..................................................................................................................................................................................................................................................................................................................................................................................2111.001.001.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................GTGAGACCGTGGACCAGGCTG..............................2111.001.00----------------1.00-----------------------------------------------------------------------
..GAACATCTGCCAGGAGGCCAAGAACTAC..........................................................................................................................................................................................................................................................................................................................................................................2811.001.00------------------------1.00---------------------------------------------------------------
.....................AAGAACTACTTTGACTTCG................................................................................................................................................................................................................................................................................................................................................................1911.001.00-1.00--------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................GTGGACCAGGCTGTGGAGAAC......................211.000.00---------------------------------------------------------------------------------1.00------
...................................................................................................................................................................................................................................................TTGGGGGCCCGGGCTCCG...................................................................................................................................181.000.00-------------------------------------------------1.00--------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................ACCGTGGACCAGGCTGT.............................1711.001.00----------------------------------------------------------------------1.00-----------------
.......................................................................................................................................................................................................................................................................................................................................................GAGACCGTGGACCAGGCTGTGGAGACC......................2711.001.00-1.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................................ACTGGGTGCTGGAGGGTCTGC..........................................................................................................................................................................................211.000.00----------------------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................AGACCGTGGACCAGGCTGT.............................1911.001.00--------1.00-------------------------------------------------------------------------------
.AGAACATCTGCCAGGAGGCCAAG................................................................................................................................................................................................................................................................................................................................................................................2311.001.00--------------1.00-------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................AGGCCCCCTGCTCCCTCCT.....................................................1911.001.00----------------------------------------------------------1.00-----------------------------
......................................................................................................................................................................................................................................................................................................................................................TGAGACCGTGGACCAGGCTGT.............................2111.001.00---------------------------------------1.00------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................GTGGACCAGGCTGTGGAGACCTACGGC................2711.001.00--------1.00-------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................ACCTACGGCCTGCAGAAG.......1811.001.00-----------------------1.00----------------------------------------------------------------
.AGAACATCTGCCAGGAGGCCAAGA...............................................................................................................................................................................................................................................................................................................................................................................2411.001.00----------------------------------------------------------------------------1.00-----------
...........CCAGGAGGCCAAGAACTACTTT.......................................................................................................................................................................................................................................................................................................................................................................2211.001.00----1.00-----------------------------------------------------------------------------------
......ATCTGCCAGGAGGCCCGC................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------1.00--------------------------------------------------------------
......................................................................................................................................................................GGGAGCAGCTGTGGAGCGG...............................................................................................................................................................................................................191.000.00---------------------------------------------------------------------1.00------------------
..........................................................................................................................................................TCAGAGAGAAGAGGGCTC............................................................................................................................................................................................................................181.000.00-----------------------------1.00----------------------------------------------------------
.......TCTGCCAGGAGGCCAAGAACTACTTTG......................................................................................................................................................................................................................................................................................................................................................................2711.001.001.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................AGACCTACGGCCTGCAGAAGATAACG.2611.001.00--------------------------------------------------------1.00-------------------------------
.....................................................................................................................................................................................................................................................................................................................................................GTGAGACCGTGGACCAGGCT...............................2011.001.00------------------------------1.00---------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................TACGGCCTGCAGAAGATAACG.2111.001.00-1.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................TACGGCCTGCAGAAGATATCG.211.000.00------------------------------------------------------------1.00---------------------------
................................................................................................................................................................................................................................................................................................................................................................GACCAGGCTGTGGAGACCTACG..................2211.001.00------1.00---------------------------------------------------------------------------------
..........................................................................................................................................................TCAGAGAGAAGAGGGTTC............................................................................................................................................................................................................................181.000.00-------------------------------1.00--------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................GAGACCTACGGCCTGCAG..........1811.001.00------------------------------------------------------------------1.00---------------------
..GAACATCTGCCAGGAGGCCAAG................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-1.00--------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................GGAGACCTACGGCCTGCAGAA........2111.001.001.00---------------------------------------------------------------------------------------
.......TCTGCCAGGAGGCCAAGAACTAC..........................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------------------------------------------1.00------------------------------------------
.........TGCCAGGAGGCCAAGAACTACTTTG......................................................................................................................................................................................................................................................................................................................................................................2511.001.001.00---------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................TGGGGAGCTGGGTGGGGCTG.........................................................................................................201.000.00---1.00------------------------------------------------------------------------------------
.........TGCCAGGAGGCCAAGAACTACTT........................................................................................................................................................................................................................................................................................................................................................................2311.001.00----1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................GTGGAGACCTACGGCCTGCAGAAGATAACG.3011.001.00---------1.00------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................GGACCAGGCTGTGGAGACCTAC...................2211.001.00-----------------------------------------------------------------------------1.00----------
.........................................................................................................................................................................................................................................................................................................................................................................GTGGAGACCTACGGCCTGCAGAA........2311.001.00----------1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................AGATCACTGGGTGCTGGCC.................................................................................................................................................................................................191.000.00---------------------------------1.00------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................ACCGTGGACCAGGCTGTGGAGACC......................2411.001.00----------1.00-----------------------------------------------------------------------------
...AACATCTGCCAGGAGGCCAAGA...............................................................................................................................................................................................................................................................................................................................................................................2211.001.00---------1.00------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGGCCCGGGCTGGGGGA................................................................................................................................211.000.00--------------------------------------------------------------1.00-------------------------
............................................................................................................................................................................................................................................................................GGGGAGCTGGGTGGGGTAG.........................................................................................................191.000.00-------------------------------------1.00--------------------------------------------------
................AGGCCAAGAACTACTTTGACTTCG................................................................................................................................................................................................................................................................................................................................................................2411.001.00-------1.00--------------------------------------------------------------------------------
......ATCTGCCAGGAGGCCAAGAACTACTTT.......................................................................................................................................................................................................................................................................................................................................................................2711.001.001.00---------------------------------------------------------------------------------------
..........................................................................................................................................................TCAGAGAGAAGAGGGCTTT...........................................................................................................................................................................................................................191.000.00-------------------1.00--------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................AGACCTACGGCCTGCAGAAGATA....2311.001.00-------------1.00--------------------------------------------------------------------------
.......................................................................TGGGGTGGGTGGGATTGGAA.............................................................................................................................................................................................................................................................................................................201.000.00-------------------------------------1.00--------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TGTGGAGACCTACGGCCTGCA...........2111.001.00----1.00-----------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................CGTGGACCAGGCTGTGGAGACCTACG..................2611.001.00-1.00--------------------------------------------------------------------------------------
..........................................................................................................................................................TCAGAGAGAAGAGGGCAT............................................................................................................................................................................................................................181.000.00-----------------------------1.00----------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................AGGCCCCCTGCTCCCTCCTCAG..................................................2211.001.00---1.00------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................GTGAGACCGTGGACCAGGCTGTGGAGACC......................2911.001.00---------1.00------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................GTGGGGCGGTGTTGGGGAAA..............................................................................................201.000.00------------------------------------------------1.00---------------------------------------
..........................................................................................................................................................TCAGAGAGAAGAGGGCTCA...........................................................................................................................................................................................................................191.000.00-------------------1.00--------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................TGGACCAGGCTGTGGAGACC......................2011.001.00--------------------------------------------------------------------1.00-------------------
.......TCTGCCAGGAGGCCAAGAACTACTT........................................................................................................................................................................................................................................................................................................................................................................2511.001.00-------------1.00--------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................CCTACGGCCTGCAGAAGA......1811.001.00---------------------------------------------------------------1.00------------------------
.......................................................................TGGGGTGGGTGGGATTGGGGGTA..........................................................................................................................................................................................................................................................................................................231.000.00----------------------1.00-----------------------------------------------------------------
..........GCCAGGAGGCCAAGAACTACTTTGACT...................................................................................................................................................................................................................................................................................................................................................................2711.001.001.00---------------------------------------------------------------------------------------
..........................................................................................................................................................TCAGAGAGAAGAGGGCAC............................................................................................................................................................................................................................181.000.00-----------------------------------1.00----------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................GAGACCTACGGCCTGCAGAAGATAAC..2611.001.00----1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................GGGGGGCCCGGCGGTGGA..................................................................................181.000.00------------------------------------------------------1.00---------------------------------
............................................................................................................................................................................................................................................................................................................................................................................GAGACCTACGGCCTGCAGAA........2011.001.00----------1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................GGGGGCCCGGCGGTGGGT.................................................................................181.000.00--------------------------------1.00-------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................GGACCAGGCTGTGGAGA........................1720.500.50------0.50---------------------------------------------------------------------------------
..........................................................................................................CACCTGCTCCCAGATGGC............................................................................................................................................................................................................................................................................1820.500.50-----------------------------------------------------------------------------------0.50----
.AGAACATCTGCCAGGAG......................................................................................................................................................................................................................................................................................................................................................................................1720.500.50-------------------------------------------------------------------------------------0.50--
..............................................................................................................................................................................................................................................................................................................................................................TGGACCAGGCTGTGGAG.........................1720.500.50-----------0.50----------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................CGTGGACCAGGCTGTGGA..........................1820.500.50------------------------------------------------------------------------------------0.50---
.........TGCCAGGAGGCCAAGAAC.............................................................................................................................................................................................................................................................................................................................................................................1820.500.50----------0.50-----------------------------------------------------------------------------
..........GCCAGGAGGCCAAGAACT............................................................................................................................................................................................................................................................................................................................................................................1830.330.33----------0.33-----------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................GTGGACCAGGCTGTGG...........................1670.290.29------0.140.14--------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................GTGGACCAGGCTGTGGA..........................1740.250.25------0.25---------------------------------------------------------------------------------
.....................................................CGTGCGGGGCAGGGG....................................................................................................................................................................................................................................................................................................................................1560.170.17--------------------------------------------------------------------------------------0.17-
..............................................................................................................................................................................................GTGCTGGAGGGTGAGG..........................................................................................................................................................................................1690.110.11---------------------------------------------------------------------------------------0.11

Antisense strand
AAGAACATCTGCCAGGAGGCCAAGAACTACTTTGACTTCGACCTCGAGTGGTGCGTGCGGGGCAGGGGCGGTGGGGTGGGTGGGATTGGGCAGATGAGGCGGCCACCACCTGCTCCCAGATGGCGTCTAAGGCCTGTGGTCATAGGCCAGGGAGTCAGAGAGAAGAGGGAGCAGCTGTGGAGATCACTGGGTGCTGGAGGGTGAGGGCAGCCGGGAGGCTCCCGGGGGCCGGGTGGGGCAGTGTTGGGGGCCCGGGCTGGACAGCGTTGGGGAGCTGGGTGGGGCGGTGTTGGGGGGGCCCGGCGGTGCTTGGGCTGCTCAGGCCCCCTGCTCCCTCCTCAGTGAGACCGTGGACCAGGCTGTGGAGACCTACGGCCTGCAGAAGATAACGC
.......................................................................................................................................................................................(((((.(((.((..((.((.....(((((.((..((((((((..(((......)))....)))))))))).)))))....)).))..)).))).))))).(((.(((((((....))))))).)))...................................................................................
....................................................................................................................................................................................181................................................................................................................................312..............................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM532876(GSM532876)
G547T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784TAX577580(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR040011(GSM532896)
G529T. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
.................................................................................................................................................................................................................................................................................GCTGGGTGGGGCGGTGCGC.................................................................................................... 191.000.00-----------------------------------------------------------1.00----------------------------
.................................................................................................................................................................................................................................................................................................................................GGCCCCCTGCTCCCTGCTG.................................................... 191.000.00---------------------1.00------------------------------------------------------------------
..........................................................GGGGCAGGGGCGGTGGCCCC.......................................................................................................................................................................................................................................................................................................................... 201.000.00--------------1.00-------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................GCCCCCTGCTCCCTCCATAG.................................................. 201.000.00---------------------1.00------------------------------------------------------------------
.............................................................................................................ACGCCATCTGGGAGCAG.......................................................................................................................................................................................................................................................................... 1711.001.00-----------------------------------1.00----------------------------------------------------
..................................................................................................................................................................................................................................................................................................................TGAGCAGCCCAAGCA....................................................................... 1590.110.11---------------0.11------------------------------------------------------------------------