ID: uc002fnm.1_intron_1_0_chr16_89627472_f
GENE: (2)
chr16:89627422-89627684+


(2)
AGO2.ip 		(8)
B-CELL 		(2)
BRAIN 		(6)
BREAST 		(25)
CELL-LINE 		(3)
CERVIX 		(8)
HEART 		(1)
HELA 		(9)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(26)
SKIN 		(1)
TESTES 		(2)
XRN.ip

Sense strand
CAGCGGCGCGTGGCCACGTGGTTCAACCAGCCGGCCCGTAAGATCCGCAGGTGAGCCCTGCGCTCGGGGCTGCCCCTGGGGCTCGTGCCCGCGGCTGCGCCTTGGCTTGCGGGTGGCCGATGCCAGGGCGGGGGGCGCTGTCTGCAACCGTCGCGGAGCGCTGGCCTGGCGGCCTTAGGCAAGGGTGACCGCCGCTGCGCTTCTCTCCACCAGACGTAAGGCCCGGCAAGCCAAGGCGCGCCGCATCGCCCCGCGCCCCGCGT
..................................................................................................................((((...((((((.((....((((..(((((.......))))))))))).)))))))))).........................................................................................
...............................................................................................................112...............................................................178...................................................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189786RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		GSM956925PAZD5SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		GSM339994(GSM339994)
hues6. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
...........................................................................................................................................................GAGCGCTGGCCTGGCGGCCTTAGGCAAGGG..............................................................................3016.006.00--6.00---------------------------------------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGCCTC.......................................................................................2615.002.00---2.00--2.00----1.00------------------------------------------------------------------------------------
....................GTTCAACCAGCCGGCCCGTAAGATC..........................................................................................................................................................................................................................2514.004.00-------1.001.00---------------1.00------------------------1.00----------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGCT.........................................................................................2414.004.00----------2.00----------------------------1.00-----------1.00--------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGC..........................................................................................2314.004.00----------3.00-----------1.00-------------------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGC.............................................................................................2014.004.00----2.001.00-----------------------------------------------------------1.00------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGAT.........................................................................................2413.003.00--------------------3.00---------------------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGG...........................................................................................2213.003.00--------------1.00-----------------------------------------1.00------------------1.00--------------------
.......................................................................................................................................................CGCGGAGCGCTGGCCTGGCGGCCTT.......................................................................................2513.003.00-------------------3.00----------------------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGCCC........................................................................................2513.001.00---2.00--1.00-----------------------------------------------------------------------------------------
.....................TTCAACCAGCCGGCCCGTAAGATCC.........................................................................................................................................................................................................................2513.003.001.00--------------2.00--------------------------------------------------------------------------------
....................GTTCAACCAGCCGGCCCGT................................................................................................................................................................................................................................1912.002.001.00----------------------------------------1.00------------------------------------------------------
........................AACCAGCCGGCCCGTAAGAT...........................................................................................................................................................................................................................2012.002.001.00-------1.00---------------------------------------------------------------------------------------
..............................CCGGCCCGTAAGATCCGCAGACG..................................................................................................................................................................................................................232.000.00------------1.00---------------------------------------------------------------1.00-------------------
...........................CAGCCGGCCCGTAAGAT...........................................................................................................................................................................................................................1712.002.00--------------------------------2.00---------------------------------------------------------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGCAAGCC...............................2222.002.00-1.50-----------------------------------------------------------------0.50----------------------------
...................................CCGTAAGATCCGCAGAC...................................................................................................................................................................................................................172.000.00----------------2.00-------------------------------------------------------------------------------
.............................GCCGGCCCGTAAGATC..........................................................................................................................................................................................................................1612.002.00-1.00----------------1.00-----------------------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGCCT........................................................................................2512.002.00------1.00--------------1.00--------------------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGG..............................................................................................1912.002.00-----1.00----------------------------1.00-------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCG............................................................................................2112.002.00---------1.00--------------------------------------1.00-----------------------------------------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGCAA..................................1922.002.001.50----0.50------------------------------------------------------------------------------------------
..................TGGTTCAACCAGCCGGCCCGTAAGATC..........................................................................................................................................................................................................................2712.002.00-----------------------1.00---------1.00--------------------------------------------------------------
........................AACCAGCCGGCCCGTAAGATCCG........................................................................................................................................................................................................................2312.002.00---------------------2.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGCAAGC................................2122.002.00-0.50---------------1.00--------0.50---------------------------------------------------------------------
........................................................................................................................................................GCGGAGCGCTGGCCTGGCGG...........................................................................................2012.002.00----2.00-------------------------------------------------------------------------------------------
........................AACCAGCCGGCCCGTAAGATC..........................................................................................................................................................................................................................2112.002.00-------------1.00-1.00--------------------------------------------------------------------------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGCAAG.................................2021.501.501.00------------------------------------------------------------------------------------0.50----------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGCAAGCCAAGGCGCGCCGCA..................3521.501.50-------------------------------------------------------------------------------1.00--0.50-------------
.....................................................................................................................................................................................................................ACGTAAGGCCCGGCAAGCCA..............................2021.501.501.50-----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CAAGCCAAGGCGCGCCG....................1731.331.33-------1.33----------------------------------------------------------------------------------------
....................................................................................................................CCGATGCCAGGGCGGGGGGCG..............................................................................................................................2111.001.00----------------------------------------------------------1.00-------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGAAA.........................................................................................2411.002.00--------------------------------------------------------------------------1.00---------------------
..............CACGTGGTTCAACCAGCCGG.....................................................................................................................................................................................................................................2021.001.00-------------------------------------1.00----------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGTGA........................................................................................2511.003.00--------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGC....................................1721.001.00-------0.50----------------------------0.50-----------------------------------------------------------
..................TGGTTCAACCAGCCGGCCCGTAAGAC...........................................................................................................................................................................................................................2611.001.00------1.00-----------------------------------------------------------------------------------------
...............................................................................................................................................GCAACCGTCGCGGAGCGCTGGCCTGG..............................................................................................2611.001.00----1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................AGCCAAGGCGCGCCGCATCGC..............2121.001.00---------------------------1.00--------------------------------------------------------------------
..............................................................................................................................................................................................................................................CGCCGCATCGCCCCGCGCCCA....211.000.00------------------1.00-----------------------------------------------------------------------------
........................AACCAGCCGGCCCGTAAGATCCGCAGACG..................................................................................................................................................................................................................291.000.00-----------------------------------------------------1.00------------------------------------------
...........................................................................................CGGCTGCGCCTTGGCTTGCGGG......................................................................................................................................................2211.001.00------------------------1.00-----------------------------------------------------------------------
..........................CCAGCCGGCCCGTAAGATCCGCAGACGT.................................................................................................................................................................................................................281.000.00-----------------------1.00------------------------------------------------------------------------
..................................................................................................................................................ACCGTCGCGGAGCGCTGG...................................................................................................1811.001.00-----------------------------------1.00------------------------------------------------------------
.......................................................................................................................................................CGCGGAGCGCTGGCCTGGCGGT..........................................................................................221.000.00----------------------------1.00-------------------------------------------------------------------
.............................GCCGGCCCGTAAGATCCGC.......................................................................................................................................................................................................................1911.001.00---------------------------------------------------------------1.00--------------------------------
..............................CCGGCCCGTAAGATCCGCA......................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------1.00----------------------
............................................................................................................................................................................................................................GCCCGGCAAGCCAAGACGT........................191.000.001.00-----------------------------------------------------------------------------------------------
.......................................................................................................................................................CGCGGAGCGCTGGCCTGGCGA...........................................................................................211.000.00--------------1.00---------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GTAAGGCCCGGCAAGCC...............................1721.001.00-------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................................TGACCGCCGCTGCGCTTCTCTCC.......................................................2311.001.00----------------------------------------------------------------1.00-------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGA..............................................................................................191.000.00----------------------1.00-------------------------------------------------------------------------
.........................................................................................................................................................................................................................AAGGCCCGGCAAGCCAAGGCGCGC......................2421.001.00-------------------------0.50-----------0.50----------------------------------------------------------
.......................CAACCAGCCGGCCCGTAAGATC..........................................................................................................................................................................................................................2211.001.00-1.00----------------------------------------------------------------------------------------------
............................................................................................................................................................................................................CTCCACCAGACGTAAGGC.........................................1811.001.00-------------------------------------------------------1.00----------------------------------------
.....................................................................................................................................................................................................................ACGTAAGGCCCGGCAAGCC...............................1921.001.001.00-----------------------------------------------------------------------------------------------
...............................................................TCGGGGCTGCCCCTGGGGCTCGTG................................................................................................................................................................................2411.001.00-------------------------------------------------------------1.00----------------------------------
.................................GCCCGTAAGATCCGCAGACG..................................................................................................................................................................................................................201.000.00-------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................GTCGCGGAGCGCTGGCCTGG..............................................................................................2011.001.00-----1.00------------------------------------------------------------------------------------------
........................AACCAGCCGGCCCGTAAGATCT.........................................................................................................................................................................................................................2211.002.00-----------------------------------------------------------------------1.00------------------------
................................................................................................................................................................................................................ACCAGACGTAAGGCCCG......................................1711.001.00------------------------------1.00-----------------------------------------------------------------
...........................................................................................................................................................................................ACCGCCGCTGCGCTTCTCTCCACCAGACGC..............................................301.000.00-----------1.00------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................ACGTAAGGCCCGGCAAGCCAAG............................2221.001.001.00-----------------------------------------------------------------------------------------------
....................GTTCAACCAGCCGGCCCGTAAGATCCGCA......................................................................................................................................................................................................................2911.001.00--------1.00---------------------------------------------------------------------------------------
....GGCGCGTGGCCACGTGGTAAG..............................................................................................................................................................................................................................................211.000.00-------------------------1.00----------------------------------------------------------------------
...........................................................................................................................................................GAGCGCTGGCCTGGCGGCCTTAGGCAAGGT..............................................................................301.000.00--1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................ACGTAAGGCCCGGCAAGCCAAGGCGC........................2621.001.000.50-------------------------0.50---------------------------------------------------------------------
........................AACCAGCCGGCCCGTAAG.............................................................................................................................................................................................................................1811.001.00-----------------------1.00------------------------------------------------------------------------
.........................ACCAGCCGGCCCGTAAGATC..........................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------1.00---------------------------------
.........................................................................................................................................................................................TGACCGCCGCTGCGCTTCTCTCCACCAG..................................................2811.001.00--------------------------------------1.00---------------------------------------------------------
...............................CGGCCCGTAAGATCCGCAGAC...................................................................................................................................................................................................................211.000.00-----------------1.00------------------------------------------------------------------------------
.....GCGCGTGGCCACGTGGTTCAGC............................................................................................................................................................................................................................................221.000.00-1.00----------------------------------------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGCA.........................................................................................2411.004.00------------------------------------------------------------1.00-----------------------------------
................................GGCCCGTAAGATCCGCAGA....................................................................................................................................................................................................................191.000.00---------------------------------------------1.00--------------------------------------------------
..................TGGTTCAACCAGCCGGCCCGTAAGA............................................................................................................................................................................................................................2511.001.00--------------------------------------------1.00---------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGCC.........................................................................................2411.001.00--------------1.00---------------------------------------------------------------------------------
.......................................................................................................................................CGCTGTCTGCAACCGTC...............................................................................................................1711.001.00---------------------------1.00--------------------------------------------------------------------
....................GTTCAACCAGCCGGCCCGTA...............................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------1.00------------------
................................GGCCCGTAAGATCCGCAGACG..................................................................................................................................................................................................................211.000.00---------1.00--------------------------------------------------------------------------------------
......................TCAACCAGCCGGCCCGTAAGATCCGCAGACGT.................................................................................................................................................................................................................321.000.00-----------------------------1.00------------------------------------------------------------------
........................................................................................................................................................GCGGAGCGCTGGCCTGGCGGCCTT.......................................................................................2411.001.00----------------------------------------------------------------------1.00-------------------------
.................GTGGTTCAACCAGCCGGCCCGTAAGATCCGC.......................................................................................................................................................................................................................3111.001.00------------------------------------------1.00-----------------------------------------------------
...............................CGGCCCGTAAGATCCGCAGACGT.................................................................................................................................................................................................................231.000.00--------------------------1.00---------------------------------------------------------------------
.......................CAACCAGCCGGCCCGTAAGATCCGCAGA....................................................................................................................................................................................................................281.000.00------------1.00-----------------------------------------------------------------------------------
..............................CCGGCCCGTAAGATC..........................................................................................................................................................................................................................1511.001.00---------1.00--------------------------------------------------------------------------------------
..................................................................................................................................................ACCGTCGCGGAGCGCTGGCCTGGCGGCC.........................................................................................2811.001.00-----------1.00------------------------------------------------------------------------------------
.............................................................................................................................GGGCGGGGGGCGCTGTAGCT......................................................................................................................201.000.00---------------------------------------------------------1.00--------------------------------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGCA...................................1821.001.00--------------------------------------------------1.00---------------------------------------------
................................GGCCCGTAAGATCCGCAGAC...................................................................................................................................................................................................................201.000.00-------------------------------1.00----------------------------------------------------------------
.......................CAACCAGCCGGCCCGCAAA.............................................................................................................................................................................................................................191.000.00---1.00--------------------------------------------------------------------------------------------
.......................................................................................................................................................CGCGGAGCGCTGGCCTGGCGGCCCTGT.....................................................................................271.000.00------1.00-----------------------------------------------------------------------------------------
........................................................................................................................................................GCGGAGCGCTGGCCTGGCGGCAG........................................................................................231.000.00-----------------------------------------------------------1.00------------------------------------
.......................CAACCAGCCGGCCCGTAAGATCC.........................................................................................................................................................................................................................2311.001.00-----------------------------1.00------------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGA..........................................................................................2311.003.00----------------------------------------------------1.00-------------------------------------------
...................................CCGTAAGATCCGCAGA....................................................................................................................................................................................................................161.000.00----------------------------------------------1.00-------------------------------------------------
...................GGTTCAACCAGCCGGCCCGTAAGATCC.........................................................................................................................................................................................................................2711.001.00---------------------------------------------------------------------1.00--------------------------
..............................CCGGCCCGTAAGATCCGC.......................................................................................................................................................................................................................1811.001.00----------------------------------------1.00-------------------------------------------------------
....................GTTCAACCAGCCGGCTATC................................................................................................................................................................................................................................191.000.00----------------------------1.00-------------------------------------------------------------------
...................................CCGTAAGATCCGCAGACG..................................................................................................................................................................................................................181.000.00-------1.00----------------------------------------------------------------------------------------
........................................................................................................................................................GCGGAGCGCTGGCCTGGA.............................................................................................181.000.00-----------------------------------------------1.00------------------------------------------------
...........................................................................................................................................GTCTGCAACCGTCGCGGAGCGCTGG...................................................................................................2511.001.00------------------------------------------------------1.00-----------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGGAC........................................................................................2511.003.00---1.00--------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGCAAGCCAAGG...........................2621.001.00------------1.00-----------------------------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGCTAAT......................................................................................2711.004.00--------------------------------------------------------------------1.00---------------------------
............................AGCCGGCCCGTAAGATC..........................................................................................................................................................................................................................1711.001.00-1.00----------------------------------------------------------------------------------------------
........................AACCAGCCGGCCCGTAAGATCC.........................................................................................................................................................................................................................2211.001.00--------1.00---------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GACGTAAGGCCCGGCAAGCCA..............................2121.001.00--------1.00---------------------------------------------------------------------------------------
...........................................................................................................................................GTCTGCAACCGTCGCGGAGCGCTGGCCTGGC.............................................................................................3111.001.00-------1.00----------------------------------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGAG.............................................................................................201.000.00----------------------------------1.00-------------------------------------------------------------
.............................GCCGGCCCGTAAGATCCGCAGACGT.................................................................................................................................................................................................................251.000.00------------------------------------------------------------------------1.00-----------------------
.........................ACCAGCCGGCCCGTAAGATCC.........................................................................................................................................................................................................................2111.001.00-1.00----------------------------------------------------------------------------------------------
.........................................................................................CGCGGCTGCGCCTTGGCTTGC.........................................................................................................................................................2111.001.00------------------------------1.00-----------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGCCCT.......................................................................................2611.001.00---1.00--------------------------------------------------------------------------------------------
..........TGGCCACGTGGTTCAACCAGCCGGCCCGTAAG.............................................................................................................................................................................................................................3211.001.00---------1.00--------------------------------------------------------------------------------------
......................................................................................................................................................TCGCGGAGCGCTGGCCTGGCGGGCC........................................................................................2511.003.00---1.00--------------------------------------------------------------------------------------------
........................AACCAGCCGGCCCGTAAGA............................................................................................................................................................................................................................1911.001.00---------------1.00--------------------------------------------------------------------------------
...........................CAGCCGGCCCGTAAGA............................................................................................................................................................................................................................1611.001.00----------------1.00-------------------------------------------------------------------------------
.....................TTCAACCAGCCGGCCCGT................................................................................................................................................................................................................................1811.001.00-------------------------1.00----------------------------------------------------------------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGCAAGCCAAGGCGCGCCG....................3321.001.00---------1.00--------------------------------------------------------------------------------------
..........................CCAGCCGGCCCGTAAGATC..........................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------1.00-----------------
.....................................................................................................................................................GTCGCGGAGCGCTGGCCTGGCGG...........................................................................................2311.001.00----------------------1.00-------------------------------------------------------------------------
................................................................................................................................................................................................................................GGCAAGCCAAGGCGCG.......................1630.670.67-------------------------------------------0.67----------------------------------------------------
..............................................................................................................................................................................................................................................CGCCGCATCGCCCCGCGCCCCGCG.2420.500.50-----0.50------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GTAAGGCCCGGCAAGCCAAGGCGC........................2420.500.50-----------------------------------------------------------------------------------0.50------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGG.....................................1620.500.50----------------------------------------0.50-------------------------------------------------------
...................................................................................................................................................................................................................................AAGCCAAGGCGCGCCGCATCG...............2120.500.50--------0.50---------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGCAAGCCAAGGCG.........................2820.500.50------------------0.50-----------------------------------------------------------------------------
.......................................................................................................................................................................................................................GTAAGGCCCGGCAAGCCAAGGCGCGCCGCA..................3020.500.50----------------0.50-------------------------------------------------------------------------------
........................................................................................................................................................................................................................TAAGGCCCGGCAAGCCAA.............................1820.500.500.50-----------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................AGACGTAAGGCCCGGCAAG.................................1920.500.50-0.50----------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................AGACGTAAGGCCCGGCAAGCCAAGGC..........................2620.500.500.50-----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GTAAGGCCCGGCAAGC................................1620.500.50-------------0.50----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................ACGTAAGGCCCGGCAAGCCAAGG...........................2320.500.50---------------------------------------------------------------------------------0.50--------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGCAAGCCAAG............................2520.500.50-0.50----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................AAGGCGCGCCGCATCGCCCCGCG........2320.500.50-----------------0.50------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................CGCCGCATCGCCCCGCGC.......1820.500.50---------------------------------------0.50--------------------------------------------------------
.........GTGGCCACGTGGTTCAACCAG.........................................................................................................................................................................................................................................2140.500.50--------------------------------------------------------------------------------------0.50---------
.......................................................................................................................................................................................................................GTAAGGCCCGGCAAGCCAAG............................2020.500.50-----------------0.50------------------------------------------------------------------------------
...................................................................................................................................................................................................................AGACGTAAGGCCCGGC....................................1620.500.50------------------------------------------0.50-----------------------------------------------------
.........................................................................................................................................................................................................................................AGGCGCGCCGCATCGCCCCGCG........2220.500.50-----------------0.50------------------------------------------------------------------------------
.........GTGGCCACGTGGTTCAACCAGCCGG.....................................................................................................................................................................................................................................2520.500.50------------0.50-----------------------------------------------------------------------------------
........................................................................................................................................................................................................................TAAGGCCCGGCAAGCCAAGGC..........................2120.500.50--------------------------------------0.50---------------------------------------------------------
.....................................................................................................................................................................................................................ACGTAAGGCCCGGCAAGCCAAGGCGCG.......................2720.500.50-----------------------------------------0.50------------------------------------------------------
........................................................................................................................................................................................................................TAAGGCCCGGCAAGCCAAGG...........................2020.500.50----0.50-------------------------------------------------------------------------------------------
.................GTGGTTCAACCAGCCGGCC...................................................................................................................................................................................................................................1920.500.50------------------------------------0.50-----------------------------------------------------------
..............................................................................................................................................................................................................................CCGGCAAGCCAAGGCGCG.......................1820.500.50-------0.50----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GCAAGCCAAGGCGCGCCGCATCGCCCCGCG........3020.500.50------------0.50-----------------------------------------------------------------------------------
......................................................................................................................................................................................................................CGTAAGGCCCGGCAAGCCAAGGC..........................2320.500.50--------------------------------------------------------------------------------0.50---------------
.......................................................................................................................................................................................................................GTAAGGCCCGGCAAGCCAAGGCG.........................2320.500.50-0.50----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GACGTAAGGCCCGGCAAGCC...............................2020.500.50-------0.50----------------------------------------------------------------------------------------
...................................................................................................................................................................................................................AGACGTAAGGCCCGGCAAGCCAAG............................2420.500.50------------------------------------0.50-----------------------------------------------------------
..............................................................................................................................................................................................................................................CGCCGCATCGCCCCGCGCCCC....2120.500.50------------------0.50-----------------------------------------------------------------------------
...........................................................................................................................................................................................................................GGCCCGGCAAGCCAAGGCGCGC......................2220.500.50------------------------0.50-----------------------------------------------------------------------
.......................................................................................................................................................................................................................GTAAGGCCCGGCAAGCCAAGGCGCT.......................2520.500.50----0.50-------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GACGTAAGGCCCGGCA...................................1620.500.50---------0.50--------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GTAAGGCCCGGCAAGCCAAGGCGCG.......................2520.500.50-------------0.50----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................CAAGGCGCGCCGCATCG...............1720.500.50-------------------------------------------0.50----------------------------------------------------
..................................................................................................................................................................................................................CAGACGTAAGGCCCGGCAAGCCGAG............................2520.502.000.50-----------------------------------------------------------------------------------------------
.............CCACGTGGTTCAACCAGCCGGCC...................................................................................................................................................................................................................................2320.500.50------------------------------------------------------------------------------------0.50-----------
....................................................................................................................................................................................................................GACGTAAGGCCCGGCAAGCCAAGGCGC........................2720.500.50--------------------------0.50---------------------------------------------------------------------
........CGTGGCCACGTGGTTCAACCAGC........................................................................................................................................................................................................................................2330.330.33------------------------------------------------------------------------------------------0.33-----
.................GTGGTTCAACCAGCCG......................................................................................................................................................................................................................................1630.330.33-------------0.33----------------------------------------------------------------------------------
.......GCGTGGCCACGTGGTT................................................................................................................................................................................................................................................1630.330.33-----------------------------------------------------------------------------------------0.33------
.....................................................................................................................................................................................................................................................TCGCCCCGCGCCCCGCG.1730.330.33------------0.33-----------------------------------------------------------------------------------
...................GGTTCAACCAGCCGGCCCG.................................................................................................................................................................................................................................1930.330.33--------------------------------------------0.33---------------------------------------------------
..................TGGTTCAACCAGCCGGCCC..................................................................................................................................................................................................................................1930.330.33----------------------------------------------------------------------------------------0.33-------
........CGTGGCCACGTGGTTC...............................................................................................................................................................................................................................................1630.330.33------------------0.33-----------------------------------------------------------------------------
...CGGCGCGTGGCCACGTGGTTC...............................................................................................................................................................................................................................................2130.330.33---------------------------------------------0.33--------------------------------------------------
.....GCGCGTGGCCACGTGGTTCAACCA..........................................................................................................................................................................................................................................2430.330.33----------------------------------------------0.33-------------------------------------------------
................CGTGGTTCAACCAGCC.......................................................................................................................................................................................................................................1640.250.25-------------------------------------------0.25----------------------------------------------------
..................TGGTTCAACCAGCCGGC....................................................................................................................................................................................................................................1740.250.25---------------------------------------------------------------------------------------------0.25--
..............CACGTGGTTCAACCAGCC.......................................................................................................................................................................................................................................1840.250.25--------------------------------------------------------------------------------------------0.25---
..................TGGTTCAACCAGCCGG.....................................................................................................................................................................................................................................1640.250.25------------0.25-----------------------------------------------------------------------------------
.............CCACGTGGTTCAACCAGCC.......................................................................................................................................................................................................................................1940.250.25---------------------------0.25--------------------------------------------------------------------
................................................................................................................................................................................................................................GGCAAGCCAAGGCGC........................1550.200.20----------------------------------------------------------------------------------------------0.20-
..GCGGCGCGTGGCCACG.....................................................................................................................................................................................................................................................1650.200.20-----------------------------------------------------------------------------------------------0.20

Antisense strand
CAGCGGCGCGTGGCCACGTGGTTCAACCAGCCGGCCCGTAAGATCCGCAGGTGAGCCCTGCGCTCGGGGCTGCCCCTGGGGCTCGTGCCCGCGGCTGCGCCTTGGCTTGCGGGTGGCCGATGCCAGGGCGGGGGGCGCTGTCTGCAACCGTCGCGGAGCGCTGGCCTGGCGGCCTTAGGCAAGGGTGACCGCCGCTGCGCTTCTCTCCACCAGACGTAAGGCCCGGCAAGCCAAGGCGCGCCGCATCGCCCCGCGCCCCGCGT
..................................................................................................................((((...((((((.((....((((..(((((.......))))))))))).)))))))))).........................................................................................
...............................................................................................................112...............................................................178...................................................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189786RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		GSM956925PAZD5SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		GSM339994(GSM339994)
hues6. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
................................................................................................................................................CAACCGTCGCGGAGCGGAA.................................................................................................... 191.000.00---------------------------------1.00--------------------------------------------------------------
...........................................................GCGCTCGGGGCTGCCCGTGG........................................................................................................................................................................................ 201.000.00-----------1.00------------------------------------------------------------------------------------
................................................................................................................................................CAACCGTCGCGGAGCTGT..................................................................................................... 181.000.00-----1.00------------------------------------------------------------------------------------------
...............................................................................GGCTCGTGCCCGCGGCGTG..................................................................................................................................................................... 191.000.00------------------------------------------------------------------1.00-----------------------------
.................................................................................CTCGTGCCCGCGGCTGAGA................................................................................................................................................................... 191.000.00-----------1.00------------------------------------------------------------------------------------
.........................................................................................................................GCCAGGGCGGGGGGCGGG............................................................................................................................ 181.000.00--1.00---------------------------------------------------------------------------------------------
................................................................................................................................................CAACCGTCGCGGAGCGGC..................................................................................................... 181.000.00-----1.00------------------------------------------------------------------------------------------
..................................................................................................CCCGCAAGCCAAGGC...................................................................................................................................................... 1520.500.50-------------------------------------------------------------------0.50----------------------------
.............GGCCGGCTGGTTGAACCACGTGG................................................................................................................................................................................................................................... 2320.500.50----0.50-------------------------------------------------------------------------------------------
............CGGCTGGTTGAACCACGTGGC...................................................................................................................................................................................................................................... 2130.330.33-------------------------------------------------------------------------------------------0.33----