ID: uc002cuv.3_intron_0_0_chr16_3358837_f.5p
GENE: (1)
chr16:3358787-3359036+


(3)
B-CELL 		(2)
BREAST 		(6)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(2)
HELA 		(2)
LIVER 		(1)
OTHER 		(8)
SKIN 		(1)
TESTES

Sense strand
TGGCTCTGGTAGAACACTTGCAGAGGGAATCTGGTCAAACATGGAATGGGGTGAGAAGAAAGATTCCTGACATGTACAGTGAAATAGGATGCAGGTGGATATAGTAGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTGGTTTTTTTTTTAAGGACAGTTAAGGTGGGACTTGAAACTACAGGCCCACAGAAAAGTTCACAGGTTTCAGAGATTGTGGTAGATACTTCCC
............................................................................................................(((....((.(((..((((....))))...)))...))..)))...................................................................................................
...............................................................................80......................................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR189782SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
......TGGTAGAACACTTGCAGAGGGAATC...........................................................................................................................................................................................................................25111.0011.0011.00----------------------------
......TGGTAGAACACTTGCAGAGGGAATCT..........................................................................................................................................................................................................................2617.007.006.00-------------------1.00--------
....................................................................................TAGGATGCAGGTGGATATAGTAGAG.............................................................................................................................................2517.007.007.00----------------------------
....................................................................................TAGGATGCAGGTGGATATAGTAGA..............................................................................................................................................2417.007.007.00----------------------------
..................................................................................AATAGGATGCAGGTGGATATAGTAGAGATGGTGGCAGTTAGTTGAGAAATTA....................................................................................................................5215.005.00--5.00--------------------------
...............................................................................TGAAATAGGATGCAGGTGGATATAGTAGA..............................................................................................................................................2913.003.003.00----------------------------
...............................................................................................TGGATATAGTAGAGATGGTGGCAGTT.................................................................................................................................2613.003.002.00-------------------------1.00--
......TGGTAGAACACTTGCAGAGGGAATCTGGTC......................................................................................................................................................................................................................3013.003.003.00----------------------------
.................................................................................AAATAGGATGCAGGTGGATATAGTAGA..............................................................................................................................................2712.002.002.00----------------------------
....................................................................................TAGGATGCAGGTGGATATAGTAGAGA............................................................................................................................................2612.002.002.00----------------------------
....TCTGGTAGAACACTTGCAGAGGGA..............................................................................................................................................................................................................................2412.002.002.00----------------------------
......TGGTAGAACACTTGCAGAGGGAAT............................................................................................................................................................................................................................2412.002.002.00----------------------------
........................................................................................................................TAGTTGAGAAATTAGATGGATTAGGTA.......................................................................................................2712.002.002.00----------------------------
............................................................................................................................TGAGAAATTAGATGGATTAGGTAGGT....................................................................................................2612.002.002.00----------------------------
....TCTGGTAGAACACTTGCAGAGGGAATCTGG........................................................................................................................................................................................................................3011.001.001.00----------------------------
...........................................................................................................................TTGAGAAATTAGATGGATTAGGTAG......................................................................................................2511.001.001.00----------------------------
.......................................................................................................................................................ATTGTTTGGTTTTTTTTTAGAG.............................................................................221.000.00-1.00---------------------------
................................................................................................................................AAATTAGATGGATTAGGTAGGTCATTGTTTGG..........................................................................................3211.001.00-1.00---------------------------
.......................................................................................GATGCAGGTGGATATAGTAGAGATGGTG.......................................................................................................................................2811.001.00---------------------1.00-------
....................................................................................................ATAGTAGAGATGGTGGCAGTTAGTGA............................................................................................................................261.000.00---1.00-------------------------
..............................................................................................................................AGAAATTAGATGGATTAGGTAGGTCA..................................................................................................2611.001.001.00----------------------------
....TCTGGTAGAACACTTGCAGAGGGAATC...........................................................................................................................................................................................................................2711.001.001.00----------------------------
...............................................................................................TGGATATAGTAGAGATTT.........................................................................................................................................181.000.00-------------------1.00---------
......TGGTAGAACACTTGCAGAGGG...............................................................................................................................................................................................................................2111.001.001.00----------------------------
...........................................................................................................................................ATTAGGTAGGTCATTGTTTGGTTTTTTCTTT................................................................................311.000.00-1.00---------------------------
......................................................................................................................................GATGGATTAGGTAGGTCATTGTTTGGT.........................................................................................2711.001.001.00----------------------------
...................................................................................................................................................................TTTTTTTAAGGACAGTTAAGGTGGG..............................................................2511.001.001.00----------------------------
.........TAGAACACTTGCAGAGGGAATCTGGTCAAA...................................................................................................................................................................................................................3011.001.001.00----------------------------
................................................................................................................................................................................................................................TTCAGAGATTGTGGTAGATACTTCC.2511.001.001.00----------------------------
......TGGTAGAACACTTGCAGAGGGAATCTA.........................................................................................................................................................................................................................2711.007.001.00----------------------------
...............................................................................................................................................................................................................CAGAAAAGTTCACAGGGA.........................181.000.00--------------1.00--------------
.......................................................................................................................................................................................GTGGGACTTGAAACTACAGGCC.............................................2211.001.00-----------------------1.00-----
........................................................................................................................................TGGATTAGGTAGGTCAA.................................................................................................171.000.001.00----------------------------
...................................................TGAGAAGAAAGATTCCTGACATGTAC.............................................................................................................................................................................2611.001.001.00----------------------------
....................................................................................................................................TAGATGGATTAGGTAGG.....................................................................................................1711.001.001.00----------------------------
......TGGTAGAACACTTGCAGAGG................................................................................................................................................................................................................................2011.001.001.00----------------------------
........................................................................................................................................................TTGTTTGGTTTTTTTTTTAAGGGAGC........................................................................2621.000.501.00----------------------------
..................................................................................AATAGGATGCAGGTGGATATAGTAGA..............................................................................................................................................2611.001.001.00----------------------------
.......................................................................................................................TTAGTTGAGAAATTAGCTCA...............................................................................................................201.000.00-----------1.00-----------------
..................................................................................................ATATAGTAGAGATGGTGGCAGCTAG...............................................................................................................................251.000.00-1.00---------------------------
............................................................................................................................TGAGAAATTAGATGGATTAGGA........................................................................................................221.000.001.00----------------------------
..............................................................................................................................................AGGTAGGTCATTGTTTGGTTTTTTTTTTAAG.............................................................................3111.001.00---1.00-------------------------
....................................................................................TAGGATGCAGGTGGATATAGTAG...............................................................................................................................................2311.001.001.00----------------------------
........................................................................................................................................TGGATTAGGTAGGTCATTGTTTGGT.........................................................................................2511.001.001.00----------------------------
............................................................................CAGTGAAATAGGATGGAAT...........................................................................................................................................................191.000.00---------------1.00-------------
...................................................................................................TATAGTAGAGATGGTGTTCT...................................................................................................................................201.000.00----------1.00------------------
......TGGTAGAACACTTGCAGAGGGA..............................................................................................................................................................................................................................2211.001.001.00----------------------------
.................................................................................AAATAGGATGCAGGTGGATATAGTAGAGATGGTGTT.....................................................................................................................................361.000.00------1.00----------------------
.....................................................................................AGGATGCAGGTGGATATAGTAGA..............................................................................................................................................2311.001.001.00----------------------------
........................................................................................................................TAGTTGAGAAATTAGATGGATTAGGTAGG.....................................................................................................2911.001.001.00----------------------------
........................................................................................ATGCAGGTGGATATAGTAGAGATGGTG.......................................................................................................................................2711.001.00-------------1.00---------------
........................................................................................................................TAGTTGAGAAATTAGATGGATTAGGTAGGT....................................................................................................3011.001.001.00----------------------------
.....................................................................................................TAGTAGAGATGGTGGCAGTTAGTTGA...........................................................................................................................2611.001.001.00----------------------------
..............................................................................................................................AGAAATTAGATGGATTAGGTAGGTC...................................................................................................2511.001.001.00----------------------------
.............................................................................AGTGAAATAGGATGCAGGTGGATATA...................................................................................................................................................2611.001.00------------------------1.00----
.............................................................................................GGTGGATATAGTAGAGATGGTGGCA....................................................................................................................................2511.001.00------------------1.00----------
..................................................................................................ATATAGTAGAGATGGTGGCAGTTAGTCGAG..........................................................................................................................301.000.00-1.00---------------------------
..........................................................................................GCAGGTGGATATAGTAGA..............................................................................................................................................1811.001.001.00----------------------------
............................................................................................................................................TTAGGTAGGTCATTGTTTAG..........................................................................................201.000.00----------------1.00------------
........GTAGAACACTTGCAGAGGG...............................................................................................................................................................................................................................1911.001.00------------1.00----------------
...............................................................................................TGGATATAGTAGAGATGGTGGCAGT..................................................................................................................................2511.001.001.00----------------------------
.....................................................................................................TAGTAGAGATGGTGGCAGTTAGCTGA...........................................................................................................................261.000.00-1.00---------------------------
......................................................................................................AGTAGAGATGGTGGCAGTTAGTCGAG..........................................................................................................................261.000.00-1.00---------------------------
..................................................................................AATAGGATGCAGGTGGATA.....................................................................................................................................................1911.001.00---------------------------1.00-
......TGGTAGAACACTTGCAGA..................................................................................................................................................................................................................................1811.001.001.00----------------------------
...............................................................................TGAAATAGGATGCAGGTGGATATAGTAGT..............................................................................................................................................291.000.001.00----------------------------
...................................................................................................................................TTAGATGGATTAGGTAGGTCATTGTT.............................................................................................2611.001.001.00----------------------------
........................................................................................................................TAGTTGAGAAATTAGATGGATTAGG.........................................................................................................2511.001.001.00----------------------------
.............................................................................................GGTGGATATAGTAGAGATG..........................................................................................................................................1911.001.00-----------------1.00-----------
.......................................................................................................................................................................TTTAAGGACAGTTAAGGTGGGAC............................................................2311.001.00-------------------------1.00---
...............................................................................................TGGATATAGTAGAGATGGTGGCAGTTAGT..............................................................................................................................2911.001.001.00----------------------------
.................................GTCAAACATGGAATGGGG.......................................................................................................................................................................................................1811.001.00----------------------1.00------
........................................................................................................................................................TTGTTTGGTTTTTTTTTTAAA.............................................................................211.000.00----------------------------1.00
...............................................................................................TGGATATAGTAGAGATGGTGGCA....................................................................................................................................2311.001.001.00----------------------------
.......................................................................................................................................................................TTTAAGGACAGTTAAGGTGGGACTT..........................................................2511.001.00--------1.00--------------------
...............................................................................................TGGATATAGTAGAGATGGTGGCAGTTAGTT.............................................................................................................................3011.001.001.00----------------------------
.........................................................................................TGCAGGTGGATATAGTAGAGATGGT........................................................................................................................................2511.001.001.00----------------------------
........................................................................................................................................................TTGTTTGGTTTTTTTTTTAAGG............................................................................2220.500.50---0.50-------------------------

Antisense strand
TGGCTCTGGTAGAACACTTGCAGAGGGAATCTGGTCAAACATGGAATGGGGTGAGAAGAAAGATTCCTGACATGTACAGTGAAATAGGATGCAGGTGGATATAGTAGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTGGTTTTTTTTTTAAGGACAGTTAAGGTGGGACTTGAAACTACAGGCCCACAGAAAAGTTCACAGGTTTCAGAGATTGTGGTAGATACTTCCC
............................................................................................................(((....((.(((..((((....))))...)))...))..)))...................................................................................................
...............................................................................80......................................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR189782SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
....................................................................................................................................................................................AAGGTGGGACTTGAACGG.................................................... 181.000.00---------1.00-------------------
.......................................................................................................................TTAGTTGAGAAATTATATG................................................................................................................ 191.000.00-----1.00-----------------------
................................................................................................................................................................................................GAAACTACAGGCCCATG......................................... 171.000.00----1.00------------------------
.....................................................................................................................................................................................................................AGTTCACAGGTTTCACTG................... 181.000.00-------1.00---------------------