ID: uc002bsn.2_intron_9_0_chr15_93487746_f.3p
GENE: (10)
chr15:93488851-93489100+


(1)
AGO1.ip
(3)
AGO2.ip
(19)
B-CELL
(12)
BRAIN
(23)
BREAST
(29)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(3)
HELA
(1)
KIDNEY
(4)
LIVER
(1)
OTHER
(17)
SKIN
(4)
UTERUS
(1)
XRN.ip

Sense strand
CTGCTGGCCTCAAGCAATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTATAATCCCATTTTTTTTTTTTCTTTTTTAAGGTGTGAGGTAGTAGAATATATTTACATTTTATTCATAGAACCCAAAATCTTTCATTCTTCATTGTGTTTATAACTTTTCTGTCTTATTTTTTATTTGTTTAGCTGTGAAGACAAGTAAATCTACATTGGGTCAAACAGATTTTCCAGGTAAG
.......................................................................((.((((((...............)))))).))....(((((.....)))))...............................................................................................................................
.....................................................................70...................................................123.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
TAX577579(Rovira)
total RNA. (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577453(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189787SRR343335SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577744(Rovira)
total RNA. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
SRR189784SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
TAX577740(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577589(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189785GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
TAX577746(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343334GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577590(Rovira)
total RNA. (breast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR040009(GSM532894)
G727T. (cervix)
SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................TGAGGTAGTAGAATAGTT...................................................................................................................................18117.000.002.00--7.00-14.002.003.00--2.005.00---8.007.00-2.00-5.00-6.00-3.00-1.00-5.002.003.00-1.00-3.00----2.00---3.001.00------1.001.003.003.003.003.00------1.001.001.001.001.002.001.00--1.00-------------------1.00--1.00--------1.00----1.00--1.00-----1.00----1.00-
.....................................................................................................TGAGGTAGTAGAATATATAGTT...............................................................................................................................22184.007.002.00--7.00--4.003.00-1.005.004.00-----1.00---4.00-1.001.00-3.00--2.00---5.00-4.001.003.002.00--2.00-1.001.001.00-1.00-1.001.00-1.00----2.00--2.002.001.001.00---1.00---1.00-1.00-1.00-1.001.001.00----1.00-1.001.00--1.00----------1.00-------------1.001.00--------
.....................................................................................................TGAGGTAGTAGAATATATAG.................................................................................................................................20165.007.0063.00------------------------------------1.00-------------1.00-------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAGT................................................................................................................................21123.007.004.00--1.00---2.00-2.00--------1.00--1.00---1.00-----3.00--1.001.002.00----1.00---1.00---1.00-----------------------------------------1.00---------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAT.................................................................................................................................20113.007.0013.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAGAT...............................................................................................................................22112.007.001.00--------1.00--------1.00----1.00--1.00----1.00-----------------1.00----------------------1.001.00---------1.00-------------1.00-----1.00---------------------
.....................................................................................................TGAGGTAGTAGAATATATATTT...............................................................................................................................22110.007.00---1.00--1.001.00-3.001.00----------------------------------1.00--1.00----------------------------------------------------------1.00-----------------
.....................................................................................................TGAGGTAGTAGAATAGT....................................................................................................................................1710.000.00------1.00---1.00------7.00----------------------------------------------------------------------1.00------------------------------------
.....................................................................................................TGAGGTAGTAGAATATAGTT.................................................................................................................................2019.004.002.00-----1.00--1.00--------1.00-----------------------------------------------1.00--1.00-----------------------1.00--------------------1.00----------
.....................................................................................................TGAGGTAGTAGAATATAG...................................................................................................................................1819.004.006.00--------------------------2.00------------1.00------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATAGTTA..................................................................................................................................198.000.00---1.00-----------1.00--------2.00-----2.00---1.00-----------------------------1.00------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATAT...................................................................................................................................1817.007.005.00--------------------------1.00--------1.00----------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAC.................................................................................................................................2016.007.005.00-------------------------------------------------------------------------------1.00--------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAATT...............................................................................................................................2216.007.00------1.00--2.00---------------1.00---1.00------------------1.00----------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTAATATG.....................................................................................................................................................265.000.00-1.001.00-1.00--------2.00---------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTTTTG........................................................................................................................................................245.000.00-3.001.00-----------1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATTG.................................................................................................................................205.000.005.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATAGTC...................................................................................................................................185.000.00------------------2.00-------------3.00--------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAGCT...............................................................................................................................2215.007.00-----------------------1.00---1.00----------------------1.00-------------------------1.00--------------------------------------------1.00---
.....................................................................................................TGAGGTAGTAGAATATACAG.................................................................................................................................2014.004.004.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAGG................................................................................................................................2114.007.003.00---------------------------------------------------------------------------------------------------------1.00------------------
..........................................................................CATTTTTTTTTTTTCTACAG............................................................................................................................................................204.000.00--------3.00-----1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATCGTT...............................................................................................................................2214.007.00------1.00-------------------------------------1.00------------1.00-------1.00-----------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATA....................................................................................................................................1714.004.00-------------------------1.00----------1.00----------1.00----------------------------------1.00------------------------------------------
.........................................................................................................................................................................................................................TCTACATTGGGTCAAACAGATTTTCC.......2614.004.00-----------------------------------------------------------2.00----------1.00----------1.00-------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATGGTT...............................................................................................................................2213.007.00-------1.00---1.00-----------1.00-----------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAAAT...............................................................................................................................2213.007.00---1.00---------------------1.001.00--------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATACTT...............................................................................................................................2213.007.00---1.00-------------------1.00---------------------------1.00-------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATATG................................................................................................................................2113.007.003.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTTTAG........................................................................................................................................................243.000.00--2.00-----------1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATAA...................................................................................................................................1813.004.003.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAA.................................................................................................................................2013.007.003.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATAGTTA................................................................................................................................2113.004.00----------1.00-----1.00---------------------------------1.00--------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTACAT............................................................................................................................................................202.000.00--1.00----------1.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATATCT...............................................................................................................................2212.007.00---1.00----------------------------------1.00--------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTCGG.........................................................................................................................................................222.000.00----2.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GTGAAGACAAGTAAATCTACA...........................2112.002.00------------------------------------------2.00----------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTATT...........................................................................................................................................................222.000.00--------1.00-----1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATAGT..................................................................................................................................1912.004.001.00----------------------------------------------------------------------------------------1.00-----------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAGTG...............................................................................................................................2212.007.00-------1.00---------------------------------------1.00-----------------------------------------------------------------------------
....................................................................................................GTGAGGTAGTAGAATAGTTT..................................................................................................................................202.000.002.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATA..................................................................................................................................1912.007.002.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTCTAG.......................................................................................................................................................242.000.00-2.00---------------------------------------------------------------------------------------------------------------------------
.......................................................................TCCCATTTTTTTTTTTTCTTTTTTT..........................................................................................................................................................252.000.00------------2.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATTT.................................................................................................................................2012.002.002.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATACAT.................................................................................................................................2012.004.002.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATATT................................................................................................................................2112.007.001.00-----1.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAGTA...............................................................................................................................2212.007.00---------------------------------------------------------------------------------------------------1.00-----------------1.00-------
...................................................................................................................................................................................................................................GTCAAACAGATTTTCCAG.....1812.002.00----------------------------------------------------------------------------------------------1.00-------------------------1.00----
..............................................................CCACTATAATCCCATTTTTTTTTTTTCTTTTTAAG.........................................................................................................................................................352.000.00--1.00-----1.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATGTTT...............................................................................................................................2212.007.001.00------1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTATTT..........................................................................................................................................................232.000.00-1.001.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATTTAG.................................................................................................................................2041.250.751.25----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................TCTACATTGGGTCAAACAGATTTTCCAG.....2811.001.00--------------------------------------------------------------------------1.00--------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATACAC...............................................................................................................................2211.007.001.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTATAG........................................................................................................................................................231.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTATGGG......................................................................................................................................................251.000.00----1.00------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTAACATG.....................................................................................................................................................261.000.00-------------1.00---------------------------------------------------------------------------------------------------------------
......................................................................................................GAGGTAGTAGAATATATAGAT...............................................................................................................................211.000.00-------1.00---------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTAAAG..........................................................................................................................................................221.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATACATG..................................................................................................................................191.000.00----------------------------------------1.00------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTAATTT......................................................................................................................................................251.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................CAAACAGATTTTCCAGCTCA.2031.000.33----------------------------------------------------------1.00------------------------------------------------------------------
.....................................................................................................................................................................................................................TAAATCTACATTGGGTCAAACAA..............231.000.00---------------------------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAGGT...............................................................................................................................2211.007.00------------------------------------------------1.00----------------------------------------------------------------------------
..............................................................CCACTATAATCCCATTTTTTTTTTTTTTTT..............................................................................................................................................................301.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................AGGTGTGAGGTAGTAGAATA......................................................................................................................................2011.001.00------------------------------------------1.00----------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTCAAG..........................................................................................................................................................221.000.00--------1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................TTTAAGGTGTGAGGTAGTAGAAT.......................................................................................................................................2311.001.00--------------------------------------------------------------------------------------------------1.00--------------------------
.....................................................................................................TGAGGTAGTAGAATATATGGTC...............................................................................................................................2211.007.00--------------------------------------1.00--------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTCTAT........................................................................................................................................................231.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTTTCTG.......................................................................................................................................................251.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
...............................................................CACTATAATCCCATTTTTTTTTTTTCTTTTTTAAG........................................................................................................................................................3511.001.00--------1.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAGGA...............................................................................................................................2211.007.00-------------------------1.00---------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTCCCT..........................................................................................................................................................231.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATACCG...................................................................................................................................181.000.00----------------------------------------1.00------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTAATTTC.....................................................................................................................................................261.000.00----1.00------------------------------------------------------------------------------------------------------------------------
....TGGCCTCAAGCAATCTGAAA..................................................................................................................................................................................................................................201.000.00------------------------------------------------------------------------------------------------------------1.00----------------
.....................................................................................................TGAGGTAGTAGAATATAGCGT................................................................................................................................2111.004.00-----------------------------------------------------------------------1.00-----------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATTTT................................................................................................................................2111.002.00---1.00-------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATAAAAT................................................................................................................................2111.004.00---------------------1.00-------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTAAG..........................................................................................................................................................221.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATAGTTT..................................................................................................................................191.000.001.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTCAA........................................................................................................................................................231.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATACA....................................................................................................................................171.000.00----------------------------------------------------------------------------------------------------1.00------------------------
........................................................................CCCATTTTTTTTTTTTCTTCGAG...........................................................................................................................................................231.000.00------------1.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATC..................................................................................................................................1911.007.00---------------------------------------1.00-------------------------------------------------------------------------------------
................................................................................................AGGTGTGAGGTAGTAGGTT.......................................................................................................................................191.000.00--------------------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATAAAG...................................................................................................................................181.000.001.00----------------------------------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTTAAG..........................................................................................................................................................231.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTAAT...........................................................................................................................................................211.000.00--------------1.00--------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTCACA.........................................................................................................................................................221.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTAAT...........................................................................................................................................................221.000.00--------1.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATACTG...................................................................................................................................181.000.00----------------------------------------1.00------------------------------------------------------------------------------------
............................................................................TTTTTTTTTTTTCTTTTTTATTGG......................................................................................................................................................241.000.00-------------1.00---------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................AAATCTACATTGGGTCAAAC................2011.001.00---------------------------------------------------------------------------------------------------------1.00-------------------
......................................................................................................................................................................................................................AAATCTACATTGGGTCAAA.................1911.001.00------------------------------------------------------------------------------------------------1.00----------------------------
.....................................................................................................TGAGGTAGTAGAATATATAAT................................................................................................................................2111.007.00---------------------------------------1.00-------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTAATT........................................................................................................................................................231.000.00----1.00------------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTCTCG........................................................................................................................................................241.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATTGAT...............................................................................................................................221.000.001.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATAAAT...................................................................................................................................181.000.00---------------------------------------------------------------------------------------------------------------1.00-------------
........................................................................CCCATTTTTTTTTTTTCTTTTTTT..........................................................................................................................................................241.000.00--------------------------------1.00--------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTCTCG.........................................................................................................................................................231.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTAAGTTC.....................................................................................................................................................2621.000.50------------1.00----------------------------------------------------------------------------------------------------------------
......................................................................................................GAGGTAGTAGAATATATTT.................................................................................................................................1911.001.00--------------------------------------------------------------------------------------------------------------------------1.00--
...............................................................................TTTTTTTTTCTTTTTTAAGGTGGAC..................................................................................................................................................251.000.00----1.00------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTAAATG......................................................................................................................................................251.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATACAG...............................................................................................................................2211.007.00-------------------------------1.00---------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTATG...........................................................................................................................................................211.000.00--------1.00--------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTATG..........................................................................................................................................................221.000.00----1.00------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAGAA...............................................................................................................................2211.007.00--------------------------------------------------------------1.00--------------------------------------------------------------
.....................................................................AATCCCATTTTTTTTTTTTTC................................................................................................................................................................211.000.00-------------1.00---------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTATCG..........................................................................................................................................................211.000.00-------------1.00---------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTACTT............................................................................................................................................................201.000.00--------------1.00--------------------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTAG............................................................................................................................................................211.000.00--------------1.00--------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTAC..........................................................................................................................................................211.000.00------------1.00----------------------------------------------------------------------------------------------------------------
......................................................................ATCCCATTTTTTTTTTTTCTTTTGGTT.........................................................................................................................................................271.000.00------------1.00----------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTCTA...........................................................................................................................................................211.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATTGT................................................................................................................................211.000.001.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTCCG...........................................................................................................................................................201.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTAATTAG.....................................................................................................................................................261.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATAATTT..................................................................................................................................191.000.00-----------------------------------------1.00-----------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATTTACA..............................................................................................................................2311.001.00----------------------------------------------------------1.00------------------------------------------------------------------
..............CAATCTGCCTGCCTTGGCCTCC......................................................................................................................................................................................................................2201.001.00-----------------------------------------------------------------------------------------------------------------------1.00-----
..........................................................................CATTTTTTTTTTTTCTTTACAG..........................................................................................................................................................221.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................ACATTGGGTCAAACAGATTTTCC.......2311.001.00--------------------------------------------------------------------------------------------------------------1.00--------------
.....................................................................................................TGAGGTAGTAGAATATATAAC................................................................................................................................2111.007.00-----------------------------------------------------------------------------------------------------------------1.00-----------
.......................................................................TCCCATTTTTTTTTTTAATG...............................................................................................................................................................201.000.00--------------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTTATAC.......................................................................................................................................................251.000.00------------1.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATAGCG...................................................................................................................................181.000.001.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTCTC........................................................................................................................................................231.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATGTTA...............................................................................................................................2211.007.00----------------------------------------------------1.00------------------------------------------------------------------------
...............................................................................TTTTTTTTTCTTTTTTAAGCTGG....................................................................................................................................................231.000.00----1.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................AGGTAGTAGAATATAATT.................................................................................................................................181.000.00------1.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATATTG...............................................................................................................................2211.007.00---------1.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATACTA...............................................................................................................................2211.007.00------1.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATTTA................................................................................................................................2111.001.001.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATACATG................................................................................................................................2111.004.001.00----------------------------------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTTCTCG.........................................................................................................................................................241.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTCAAG.........................................................................................................................................................231.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
........................................................................CCCATTTTTTTTTTTTCTTTTGG...........................................................................................................................................................231.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTGGC.........................................................................................................................................................231.000.00----1.00------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTCAC...........................................................................................................................................................201.000.00----1.00------------------------------------------------------------------------------------------------------------------------
............................................................................TTTTTTTTTTTTCTTTTTTATCT.......................................................................................................................................................231.000.00-------------1.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATTGA................................................................................................................................211.000.001.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATTC.................................................................................................................................201.000.001.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAACT...............................................................................................................................2211.007.00---------1.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................TAGCTGTGAAGACAAGTA...................................1811.001.00------------------------------------------1.00----------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTTAAC........................................................................................................................................................2411.001.00--1.00--------------------------------------------------------------------------------------------------------------------------
........................................................................CCCATTTTTTTTTTTTCTTTTACTG.........................................................................................................................................................251.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTCTAG..........................................................................................................................................................211.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATAGAG.................................................................................................................................2011.004.001.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTCCCG........................................................................................................................................................241.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
......................................................................................................GAGGTAGTAGAATATATAG.................................................................................................................................191.000.001.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTAGG........................................................................................................................................................231.000.00------------1.00----------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTCCT...........................................................................................................................................................211.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTTAA.........................................................................................................................................................2311.001.00-1.00---------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GCTGTGAAGACAAGTAAATCTACA...........................2411.001.00----------------------------------------------------------------------1.00------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTTCTTT.........................................................................................................................................................241.000.00--------1.00--------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTACAG........................................................................................................................................................231.000.00--------1.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATGTT................................................................................................................................2111.007.00---1.00-------------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTGCC............................................................................................................................................................201.000.00------------------------------------------------------------------------------------------------------1.00----------------------
.....................................................................AATCCCATTTTTTTTTTTTCTTTCT............................................................................................................................................................251.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATAAG....................................................................................................................................171.000.00----------1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATATA................................................................................................................................2111.007.001.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTTTTTC.......................................................................................................................................................251.000.00-------------1.00---------------------------------------------------------------------------------------------------------------
........................................................................CCCATTTTTTTTTTTTAAAA..............................................................................................................................................................201.000.00--------------1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATAGA................................................................................................................................2111.007.001.00----------------------------------------------------------------------------------------------------------------------------
............................................................................TTTTTTTTTTTTCTTTTTTACTTC......................................................................................................................................................241.000.00----1.00------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTACAGC......................................................................................................................................................251.000.00----1.00------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATATCA.................................................................................................................................2011.007.001.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTTAACACA.....................................................................................................................................................2711.001.00--1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................AATCCCATTTTTTTTTTTTCTTTTTTTT.........................................................................................................................................................281.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTAAA...........................................................................................................................................................221.000.00--------1.00--------------------------------------------------------------------------------------------------------------------
..........................................................................CATTTTTTTTTTTTCTTTTTCTAG........................................................................................................................................................241.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
....................................................................................................GTGAGGTAGTAGAATAGTTC..................................................................................................................................201.000.001.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................TCAAACAGATTTTCCAG.....1721.001.00--------------------------------------------------------------------------0.50-------------------------------------------------0.50
.....................................................................................................TGAGGTAGTAGAATATTT...................................................................................................................................1840.750.750.25---------0.50------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATAT.....................................................................................................................................1640.750.750.50--------------------------------------------------------------------------0.25-------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATTTAT.................................................................................................................................2040.750.750.75----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATTTTG.................................................................................................................................2040.500.750.50----------------------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTAAGACG.....................................................................................................................................................2620.500.50-------------0.50---------------------------------------------------------------------------------------------------------------
...........................................................................ATTTTTTTTTTTTCTTTTTTAAG........................................................................................................................................................2320.500.50------------0.50----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................CAAACAGATTTTCCAG.....1630.330.33--------------------------------------------------------------------------0.33--------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATTGAC.................................................................................................................................2040.250.750.25----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATCC...................................................................................................................................1840.250.75---------------------------------------------0.25-------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATTTAA.................................................................................................................................2040.250.75--------------------------------------------0.25--------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATTTTC.................................................................................................................................2040.250.750.25----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATTTTT.................................................................................................................................2040.250.750.25----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATTTAC.................................................................................................................................2040.250.750.25----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGAGGTAGTAGAATATCTAT.................................................................................................................................2040.250.750.25----------------------------------------------------------------------------------------------------------------------------
....................................................................................................GTGAGGTAGTAGAAT.......................................................................................................................................1550.200.20----------------------------------------------0.20------------------------------------------------------------------------------
............................................................................TTTTTTTTTTTTCTTTTTTAAGG.......................................................................................................................................................2360.170.17------------0.17----------------------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTTTTTAAG.......................................................................................................................................................2660.170.17-0.17---------------------------------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTTTT...........................................................................................................................................................2260.170.17--------0.17--------------------------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTTTTGCTG.......................................................................................................................................................2660.170.17------------0.17----------------------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTTTTTTTG.......................................................................................................................................................2660.170.17-0.17---------------------------------------------------------------------------------------------------------------------------
.........................................................................CCATTTTTTTTTTTTCTTTTTTTAG........................................................................................................................................................2560.170.17-------------0.17---------------------------------------------------------------------------------------------------------------

Antisense strand
CTGCTGGCCTCAAGCAATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTATAATCCCATTTTTTTTTTTTCTTTTTTAAGGTGTGAGGTAGTAGAATATATTTACATTTTATTCATAGAACCCAAAATCTTTCATTCTTCATTGTGTTTATAACTTTTCTGTCTTATTTTTTATTTGTTTAGCTGTGAAGACAAGTAAATCTACATTGGGTCAAACAGATTTTCCAGGTAAG
.......................................................................((.((((((...............)))))).))....(((((.....)))))...............................................................................................................................
.....................................................................70...................................................123.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
TAX577579(Rovira)
total RNA. (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577453(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189787SRR343335SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577744(Rovira)
total RNA. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
SRR189784SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
TAX577740(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577589(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189785GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
TAX577746(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343334GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577590(Rovira)
total RNA. (breast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR040009(GSM532894)
G727T. (cervix)
SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................TTTAAGGTGTGAGGTACTTG.......................................................................................................................................... 206.000.00-------------------4.00--------------------------2.00------------------------------------------------------------------------------
............................................................................................TTTAAGGTGTGAGGTAGCTTG......................................................................................................................................... 213.000.00-------------------2.00--------------------------1.00------------------------------------------------------------------------------
...........................................................................................................................................CCAAAATCTTTCATTCAAT............................................................................................ 191.000.00-------------------------1.00---------------------------------------------------------------------------------------------------
..................CTGCCTGCCTTGGCCTCCCAAAGTGTAG............................................................................................................................................................................................................ 281.000.00----1.00------------------------------------------------------------------------------------------------------------------------
..................CTGCCTGCCTTGGCCTCCCAGGC................................................................................................................................................................................................................. 231.000.00----1.00------------------------------------------------------------------------------------------------------------------------
...............AATCTGCCTGCCTTGGCCTCCCAAAGTCCG............................................................................................................................................................................................................. 301.000.00----1.00------------------------------------------------------------------------------------------------------------------------
..................CTGCCTGCCTTGGCCTCCCAAACCC............................................................................................................................................................................................................... 251.000.00----1.00------------------------------------------------------------------------------------------------------------------------
.................TCTGCCTGCCTTGGCCTGTTG.................................................................................................................................................................................................................... 211.000.00------------1.00----------------------------------------------------------------------------------------------------------------
..................CTGCCTGCCTTGGCCTCCCAAAGTGGC............................................................................................................................................................................................................. 271.000.00----1.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................TTTTTAAGGTGTGAGTTG.............................................................................................................................................. 181.000.00-------------------1.00---------------------------------------------------------------------------------------------------------
..............CAATCTGCCTGCCTTGGCCTCCCAAAGTGAGA............................................................................................................................................................................................................ 321.000.00-------------------------------------------------------------------------------------1.00---------------------------------------
..................................................................................................................................................CTTTCATTCTTCATTTTGG..................................................................................... 191.000.00-----------------------1.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................................AATGAAAGATTTTGGGTTC................................................................................................ 1920.500.50----------------------------------------------------------0.50------------------------------------------------------------------