ID: uc002bay.1_intron_1_0_chr15_76024494_r.5p
GENE: DNM1P35(1)
chr15:76030528-76030777-


(1)
AGO2.ip
(19)
B-CELL
(6)
BRAIN
(4)
BREAST
(13)
CELL-LINE
(6)
CERVIX
(1)
HEART
(2)
LIVER
(2)
OTHER
(8)
SKIN
(1)
TESTES

Sense strand
CTTAGGCCCTCCCCCTGCAGGTGCCCTCGCGCCCCTCCCGGGGTCCCCAGGTGAGTAGGGGCTGAATATGACAGGAGAGGCCGCCGGACGGGCGTGGCCGGGAGGGAAATGGGGCTGGATTCTAGAGCGTCGGACCTGGCCGCCAGAACTGGCCGTCTCCGTCCCGGGCACTCCGACCGTGGGACCGGAGCCCTGAGTGGCGGAGAGCTGGCGGAGCCTGCCCCCAAAGGAGCACTGAGTCCCGGAAGTG
.................................................................................((((.....)))).(((((((.......(((.(((.........))).)))..))))))).............................................................................................................
.................................................................66...........................................................................143.........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM532880(GSM532880)
G659T. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR040009(GSM532894)
G727T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR343335SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
.........................................................................................................................CTAGAGCGTCGGACCTAT...............................................................................................................1818.000.004.00-----1.00-1.00---2.00-2.001.00-1.00-----------1.00--1.00----1.00--1.001.00----1.00-----------------
.........................................................................................................................CTAGAGCGTCGGACCTATAC.............................................................................................................2013.000.002.001.002.00------1.001.00--2.00-----1.00-------1.00---------------1.00----1.00---------------
..........................................................................................................................TAGAGCGTCGGACCTATA..............................................................................................................1810.000.00-4.00---1.001.00----1.00-----1.00------------------1.00--------------1.00------------
.........................................................................................................................CTAGAGCGTCGGACCTATA..............................................................................................................199.000.002.00--2.00-----1.00-1.00---------1.00----------------------1.00----1.00--------------
.........................................................................................................................CTAGAGCGTCGGACCTA................................................................................................................176.000.002.00-2.001.00----------------------1.00-------------------------------------
..........................................................................................................................TAGAGCGTCGGACCTAT...............................................................................................................175.000.002.00-1.00--1.00--------------------------------1.00-------------------------
.........................................................................................................................CTAGAGCGTCGGACC..................................................................................................................1514.004.00----3.00------------------------------------------1.00----------------
..........................................................................................................................TAGAGCGTCGGACCTATAC.............................................................................................................193.000.00-----1.00--1.00------1.00------------------------------------------------
.....................................................................................................................GATTCTAGAGCGTCGGACCTGGCCGCCAGA.......................................................................................................3012.002.00-------2.00--------------------------------------------------------
...............................................................................................................................................................................................CCTGAGTGGCGGAGATGG.........................................1821.501.00--------------------------------------------------------0.500.50-0.50----
........................................................................................................................................................................................................CGGAGAGCTGGCGGAC..................................161.000.00---------------------------------------------1.00------------------
......................................................................ACAGGAGAGGCCGCCTGC..................................................................................................................................................................181.000.00-------------------------1.00--------------------------------------
........................................................................................................................................................CCGTCTCCGTCCCGGCCCC...............................................................................191.000.00----------------------------1.00-----------------------------------
.........................................................................................................................CTAGAGCGTCGGACCTATCC.............................................................................................................201.000.001.00---------------------------------------------------------------
.............................................................................AGGCCGCCGGACGGGCG............................................................................................................................................................1711.001.00-------------------------------1.00--------------------------------
.........................................................................................................................CTAGAGCGTCGGACCTCT...............................................................................................................181.000.00----------1.00-----------------------------------------------------
.........................................................................................................................................................................................................................................ACTGAGTCCCGGAAGCTT181.000.00---------------------------------------1.00------------------------
.........................................................................................................................CTAGAGCGTCGGACCTCC...............................................................................................................181.000.00------1.00---------------------------------------------------------
..................................................................................................................CTGGATTCTAGAGCGTCGGACCTGGCCGCC..........................................................................................................3011.001.00----------------1.00-----------------------------------------------
...............................................................................................................................................................................................CCTGAGTGGCGGAGA............................................1521.001.00------------------0.50---------------------------------------0.50-----
......................................................................................................................................CCTGGCCGCCAGAACTGG..................................................................................................1811.001.00-----------------------1.00----------------------------------------
................................................AGGTGAGTAGGGGCTGAATATGACAGGAGA............................................................................................................................................................................3011.001.00------------------------1.00---------------------------------------
....................................................................................................................................................CTGGCCGTCTCCGTCCGTTC..................................................................................201.000.00----------------------------------------------------1.00-----------
.....GCCCTCCCCCTGCAGGGGCC.................................................................................................................................................................................................................................201.000.00-----------------------------------------------------1.00----------
.......................................................TAGGGGCTGAATATGACAGGAGAGGCCGC......................................................................................................................................................................2911.001.00----------------1.00-----------------------------------------------
.......................................................................................................................................................................................................GCGGAGAGCTGGCGGAGCCTG..............................2111.001.00-----------------------------------1.00----------------------------
.................................................................................................................................................................................................................................AAAGGAGCACTGAGTCAGAC.....201.000.00------------------------------1.00---------------------------------
...............................................................................................................................................................................................CCTGAGTGGCGGAGAT...........................................1620.501.00------------------------------------------------------0.50---------
..............................................................................................TGGCCGGGAGGGAAATGGGGCT......................................................................................................................................2220.500.50-------------------------------------------------------0.50--------
...............................................................................................................................................................................................CCTGAGTGGCGGAGATGGG........................................1920.501.00------------------0.50---------------------------------------------
........................CCTCGCGCCCCTCCC...................................................................................................................................................................................................................1590.220.22------------------------------------------------------------0.22---
.......................CCCTCGCGCCCCTCCC...................................................................................................................................................................................................................1660.170.17--------------------------------------------------------------0.17-
.......................CCCTCGCGCCCCTCCCCCGC...............................................................................................................................................................................................................2060.170.17-------------------------------------------------------------0.17--

Antisense strand
CTTAGGCCCTCCCCCTGCAGGTGCCCTCGCGCCCCTCCCGGGGTCCCCAGGTGAGTAGGGGCTGAATATGACAGGAGAGGCCGCCGGACGGGCGTGGCCGGGAGGGAAATGGGGCTGGATTCTAGAGCGTCGGACCTGGCCGCCAGAACTGGCCGTCTCCGTCCCGGGCACTCCGACCGTGGGACCGGAGCCCTGAGTGGCGGAGAGCTGGCGGAGCCTGCCCCCAAAGGAGCACTGAGTCCCGGAAGTG
.................................................................................((((.....)))).(((((((.......(((.(((.........))).)))..))))))).............................................................................................................
.................................................................66...........................................................................143.........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM532880(GSM532880)
G659T. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR040009(GSM532894)
G727T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR343335SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
.....................TGCCCTCGCGCCCCTCCTAC................................................................................................................................................................................................................. 201.000.00----------------------------------1.00-----------------------------
.......................................................................................................................................CTGGCCGCCAGAACTGGCCGTCTCCGTCATG.................................................................................... 311.000.00------------------------------------------1.00---------------------
...................................................................................................................................................................................................................CGGAGCCTGCCCCCAGCG..................... 181.000.00---------------------------------1.00------------------------------
....................................................................................................TAGAATCCAGCCCCATTTCCCTCC.............................................................................................................................. 2411.001.00----------------------1.00-----------------------------------------
...........................CGCGCCCCTCCCGGGCCG............................................................................................................................................................................................................. 181.000.00--------------------1.00-------------------------------------------
.....................................................................................................................................................................................................................................GAGCACTGAGTCCCGTG.... 171.000.00--------------------------------------------------1.00-------------
.........................................................................................................................................GGAGACGGCCAGTTCTGGCGGCC.......................................................................................... 2360.170.17---------------------------------------------------------------0.17
........................CGGGAGGGGCGCGAGG.................................................................................................................................................................................................................. 1670.140.14------------------0.14---------------------------------------------