ID: uc001yoj.3_intron_3_0_chr14_104387546_r
GENE: (1)
chr14:104387496-104387856-


(2)
AGO2.ip 		(10)
B-CELL 		(4)
BRAIN 		(15)
BREAST 		(28)
CELL-LINE 		(6)
CERVIX 		(7)
HEART 		(2)
HELA 		(6)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(32)
SKIN 		(1)
TESTES 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
AGTTGGCTGCAGATTTGTGGTGCGTTCTGAGCCGTCTGTCCTGCGCCAAGGTGAGTACGGGGACCTGGACCTGGCTCCCGAGGTGCGAGACGGCGGGGGCGGGAGGGCGAGAAGCCGCCTTGGCCCCAGCTGATCTTGGGGTTCCACCCCTCCGCCGGCACGCGCCTGCTTTTCTGCCCGGCTTTCCCTTCTCTGAAGGGAGGTAGGCCAGGGTCGGTTGCCAGAGGGAAGCATCGCCTAGGCCTGCGCCGCGTTTCCCTCCTTGGCCTTAACGCGCTCAGTGCACCTGAATTCTCCCACGGTTTTGACAGGGAGCGTACCTTGGCCTTGAGAGGTTCAGCTGCCTAACCCAGAGGCTACG
..................................................((.....(((....)))..(((.(((((((..((.....))..))))))))))...)).............................................................................................................................................................................................................................................................
..................................................51..........................................................111........................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		GSM339994(GSM339994)
hues6. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359191(GSM359191)
HepG2_3pM_5. (cell line)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR040024(GSM532909)
G613N. (cervix)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)		GSM359190(GSM359190)
HepG2_3pM_4. (cell line)		GSM359189(GSM359189)
HepG2_2pm_3. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343337
..............TTGTGGTGCGTTCTGAGCC........................................................................................................................................................................................................................................................................................................................................19113.0013.009.00-------------4.00---------------------------------------------------------------------------------------------------------
...TGGCTGCAGATTTGTGGTG...................................................................................................................................................................................................................................................................................................................................................19112.0012.00------------1.00-------1.00------------------2.00-1.00----2.00---------------------------------------1.00--1.00---------1.00--1.001.00----------------
..........AGATTTGTGGTGCGTTCTG............................................................................................................................................................................................................................................................................................................................................1916.006.00-2.00----------------1.00-1.00---------------------------------------1.00------1.00----------------------------------------------------
.........CAGATTTGTGGTGCGTTCTG............................................................................................................................................................................................................................................................................................................................................2014.004.00--------1.00-----------------------1.00---------1.00------------------------------------------------1.00----------------------------
....................................................GAGTACGGGGACCTGGACCTGGCT.............................................................................................................................................................................................................................................................................................2414.004.00------------1.00------------1.00-------1.00-----------------------------------------------------------------------1.00--------------
..........AGATTTGTGGTGCGTTCTGAGCCGTCT....................................................................................................................................................................................................................................................................................................................................2713.003.00-------------------------1.00--1.00--------1.00----------------------------------------------------------------------------------
...............................................AAGGTGAGTACGGGGACCTGG.....................................................................................................................................................................................................................................................................................................2113.003.00-----------------------------------1.00-----------------1.00-------------------------1.00----------------------------------------
..........................................................................................CGGCGGGGGCGGGAGGGCG............................................................................................................................................................................................................................................................1913.003.00---------------2.00-----------------------------------1.00--------------------------------------------------------------------
................GTGGTGCGTTCTGAGCC........................................................................................................................................................................................................................................................................................................................................1713.003.00--1.00-1.00----------------------------------------1.00--------------------------------------------------------------------------
.................................GTCTGTCCTGCGCCAAGATG....................................................................................................................................................................................................................................................................................................................203.000.00-------1.001.00----------1.00----------------------------------------------------------------------------------------------------
....................................................GAGTACGGGGACCTGGACCT.................................................................................................................................................................................................................................................................................................2013.003.00------2.00--------------------------------------------------------1.00--------------------------------------------------------
........GCAGATTTGTGGTGCGTTCTGA...........................................................................................................................................................................................................................................................................................................................................2213.003.00----------------1.00-------------------------------------1.00-----------------1.00-----------------------------------------------
.........................................................CGGGGACCTGGACCTGGC..............................................................................................................................................................................................................................................................................................1813.003.00--2.00--------------------1.00------------------------------------------------------------------------------------------------
....................TGCGTTCTGAGCCGTCTG...................................................................................................................................................................................................................................................................................................................................1813.003.00--3.00---------------------------------------------------------------------------------------------------------------------
................................CGTCTGTCCTGCGCCAAGGTGA...................................................................................................................................................................................................................................................................................................................2212.002.00-------------------------------2.00----------------------------------------------------------------------------------------
..........AGATTTGTGGTGCGTTCTGAG..........................................................................................................................................................................................................................................................................................................................................2112.002.00------------2.00-----------------------------------------------------------------------------------------------------------
........GCAGATTTGTGGTGCGTT...............................................................................................................................................................................................................................................................................................................................................1812.002.00------------------------1.00--------------------------------------------------------------1.00--------------------------------
...............................CCGTCTGTCCTGCGCCAAGGTGA...................................................................................................................................................................................................................................................................................................................2312.002.00------------------2.00-----------------------------------------------------------------------------------------------------
..................................................GTGAGTACGGGGACCTGGAC...................................................................................................................................................................................................................................................................................................2012.002.00------2.00-----------------------------------------------------------------------------------------------------------------
..........AGATTTGTGGTGCGTTCTGA...........................................................................................................................................................................................................................................................................................................................................2012.002.00-1.00---------------------------------------------------------------------------------------------------1.00------------------
........GCAGATTTGTGGTGCGTTCTGAGCCGTCT....................................................................................................................................................................................................................................................................................................................................2912.002.00------------------------------------------------1.00---------------------------------------1.00-------------------------------
....................................................GAGTACGGGGACCTGGACCTGG...............................................................................................................................................................................................................................................................................................2212.002.00-----------------------------2.00------------------------------------------------------------------------------------------
..........................................................................................CGGCGGGGGCGGGAGGGGGG...........................................................................................................................................................................................................................................................2032.000.33-------------2.00----------------------------------------------------------------------------------------------------------
..........AGATTTGTGGTGCGTTCTGAGCCGT......................................................................................................................................................................................................................................................................................................................................2512.002.00-----1.00-------------------------------------1.00----------------------------------------------------------------------------
......CTGCAGATTTGTGGTGCGTTCTGA...........................................................................................................................................................................................................................................................................................................................................2412.002.00----------------2.00-------------------------------------------------------------------------------------------------------
.GTTGGCTGCAGATTTGTGG.....................................................................................................................................................................................................................................................................................................................................................1912.002.00----1.00----------------1.00--------------------------------------------------------------------------------------------------
..........AGATTTGTGGTGCGTTCTGAGC.........................................................................................................................................................................................................................................................................................................................................2212.002.00----1.00----------------------1.00--------------------------------------------------------------------------------------------
........GCAGATTTGTGGTGCGTTCTGAGCCG.......................................................................................................................................................................................................................................................................................................................................2612.002.00-----1.00-----------1.00------------------------------------------------------------------------------------------------------
..........................CTGAGCCGTCTGTCCTGCGCCAAG.......................................................................................................................................................................................................................................................................................................................2412.002.00----------------------------------------------------------------------------------------------------------1.001.00------------
............ATTTGTGGTGCGTTCTGAGCCG.......................................................................................................................................................................................................................................................................................................................................2212.002.00-----------------------------------1.00------------------------------------------------------1.00-----------------------------
........GCAGATTTGTGGTGCGTTCTGAGCCGT......................................................................................................................................................................................................................................................................................................................................2712.002.00-----1.00------------------------------------------------------------------------------------------1.00-----------------------
..............TTGTGGTGCGTTCTGAGCCGTC.....................................................................................................................................................................................................................................................................................................................................2212.002.00-------1.00-----------------------------------1.00----------------------------------------------------------------------------
..........................................................................................CGGCGGGGGCGGGAGGGCC............................................................................................................................................................................................................................................................1912.001.00-------------2.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................GAGCGTACCTTGGCCTTGAGA............................2112.002.00-2.00----------------------------------------------------------------------------------------------------------------------
................................................AGGTGAGTACGGGGACCT.......................................................................................................................................................................................................................................................................................................1812.002.00--------------------------1.00--------------------------------------1.00------------------------------------------------------
..TTGGCTGCAGATTTGTGGTG...................................................................................................................................................................................................................................................................................................................................................2012.002.00---------------------------------------------------------------------------1.00---------1.00----------------------------------
........GCAGATTTGTGGTGCGTTCTG............................................................................................................................................................................................................................................................................................................................................2112.002.00--------------------------------------------1.00-----------------------------------------------1.00---------------------------
...................GTGCGTTCTGAGCCGTCTGTCCTGCGCC..........................................................................................................................................................................................................................................................................................................................2812.002.00---------------------2.00--------------------------------------------------------------------------------------------------
...TGGCTGCAGATTTGTGGTGCGTTCTGAGCC........................................................................................................................................................................................................................................................................................................................................3012.002.00---------1.00-------1.00------------------------------------------------------------------------------------------------------
.....GCTGCAGATTTGTGGTG...................................................................................................................................................................................................................................................................................................................................................1712.002.00-1.00------------------------------------------------------------------------------1.00---------------------------------------
........GCAGATTTGTGGTGCGTTCTGAGC.........................................................................................................................................................................................................................................................................................................................................2412.002.00---1.00----1.00---------------------------------------------------------------------------------------------------------------
.........CAGATTTGTGGTGCGTTCT.............................................................................................................................................................................................................................................................................................................................................1912.002.00----------------------------------------2.00-------------------------------------------------------------------------------
..................GGTGCGTTCTGAGCCGTCTGTCCTGCG............................................................................................................................................................................................................................................................................................................................2712.002.00-2.00----------------------------------------------------------------------------------------------------------------------
.GTTGGCTGCAGATTTGTGGTG...................................................................................................................................................................................................................................................................................................................................................2112.002.00-----------------------1.00----------------------------------------------------------------------------1.00-------------------
.........CAGATTTGTGGTGCGTTCTGAG..........................................................................................................................................................................................................................................................................................................................................2212.002.00--------------------------1.00--------------------------------------------1.00------------------------------------------------
....GGCTGCAGATTTGTGGTGCGTTCTG............................................................................................................................................................................................................................................................................................................................................2511.001.00------------------------1.00-----------------------------------------------------------------------------------------------
.......................................CCTGCGCCAAGGTGAGTAC...............................................................................................................................................................................................................................................................................................................1911.001.00--1.00---------------------------------------------------------------------------------------------------------------------
..................GGTGCGTTCTGAGCCGTC.....................................................................................................................................................................................................................................................................................................................................1811.001.00---------------------------------1.00--------------------------------------------------------------------------------------
.......................GTTCTGAGCCGTCTGTCCTGCGCCAAGGT.....................................................................................................................................................................................................................................................................................................................2911.001.00--------------------------------------1.00---------------------------------------------------------------------------------
................................................................................................................................................CACCCCTCCGCCGGCACGT......................................................................................................................................................................................................191.000.00----------------------------------1.00-------------------------------------------------------------------------------------
..........................................................................................CGGCGGGGGCGGGAGGGCGGG..........................................................................................................................................................................................................................................................2111.003.00--------------------------------------------------------------1.00---------------------------------------------------------
...................GTGCGTTCTGAGCCGTC.....................................................................................................................................................................................................................................................................................................................................1711.001.00------------------------------------------------------------------1.00-----------------------------------------------------
..........................................................................................CGGCGGGGGCGGGAGAGGA............................................................................................................................................................................................................................................................191.000.00------------------------------------1.00-----------------------------------------------------------------------------------
......................................................GTACGGGGACCTGGACCTGGC..............................................................................................................................................................................................................................................................................................2111.001.00-----------------1.00------------------------------------------------------------------------------------------------------
.........................TCTGAGCCGTCTGTCATG..............................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------------------------------------------------------1.00---------
........................TTCTGAGCCGTCTGTCCTGC.............................................................................................................................................................................................................................................................................................................................2021.001.00---------0.50-------------------------------------------------------------------------------------------------------0.50------
......................................................GTACGGGGACCTGGA....................................................................................................................................................................................................................................................................................................1511.001.00----1.00-------------------------------------------------------------------------------------------------------------------
...TGGCTGCAGATTTGTGGTGCGTTCTGAG..........................................................................................................................................................................................................................................................................................................................................2811.001.00-------1.00----------------------------------------------------------------------------------------------------------------
.......................GTTCTGAGCCGTCTGTCCTGCGCCAAGA......................................................................................................................................................................................................................................................................................................................281.000.00-------------------1.00----------------------------------------------------------------------------------------------------
............................GAGCCGTCTGTCCTGCGCC..........................................................................................................................................................................................................................................................................................................................1911.001.00----1.00-------------------------------------------------------------------------------------------------------------------
.....GCTGCAGATTTGTGGTGCGTTCTGA...........................................................................................................................................................................................................................................................................................................................................2511.001.00-------------------------1.00----------------------------------------------------------------------------------------------
...............................................AAGGTGAGTACGGGGACCTG......................................................................................................................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------------------------------------------1.00-----------
........GCAGATTTGTGGTGCGTTCT.............................................................................................................................................................................................................................................................................................................................................2011.001.00------------------------1.00-----------------------------------------------------------------------------------------------
.......................................................................................................................TTGGCCCCAGCTGATCTTGTATC...........................................................................................................................................................................................................................231.000.00----------------------------------1.00-------------------------------------------------------------------------------------
...............................................................................................GGGGCGGGAGGGCGAGTC........................................................................................................................................................................................................................................................181.000.00----------------------------------------------------------------------------------1.00-------------------------------------
................GTGGTGCGTTCTGAGC.........................................................................................................................................................................................................................................................................................................................................1611.001.00------------------------------1.00-----------------------------------------------------------------------------------------
.......................................................TACGGGGACCTGGAC...................................................................................................................................................................................................................................................................................................1511.001.00---1.00--------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GAAGGGAGGTAGGCCAGGAAGA.................................................................................................................................................221.000.00--------------------------------------------------------------------------------------------------------1.00---------------
................GTGGTGCGTTCTGAGCCGTA.....................................................................................................................................................................................................................................................................................................................................201.000.00---1.00--------------------------------------------------------------------------------------------------------------------
....GGCTGCAGATTTGTGGTG...................................................................................................................................................................................................................................................................................................................................................1811.001.00--------------------------------------------1.00---------------------------------------------------------------------------
................................................AGGTGAGTACGGGGACCTG......................................................................................................................................................................................................................................................................................................1911.001.00-----------------------------------------1.00------------------------------------------------------------------------------
.....................GCGTTCTGAGCCGTCTGTCC................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------------1.00---------------------------------------------------------------------------------------------
..TTGGCTGCAGATTTGTGGT....................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------------1.00-------------------------------------------
.GTTGGCTGCAGATTTGTGGT....................................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------------------1.00---------------------------------------------------------------------------------------
.............TTTGTGGTGCGTTCTGAGCCGTCTGTCC................................................................................................................................................................................................................................................................................................................................2811.001.00-----------------------1.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................TTTCCCTCCTTGGCCTTAACGCGCTC..................................................................................2611.001.00------------------------------------------------------------------------------------1.00-----------------------------------
......................................................GTACGGGGACCTGGACCTGGCT.............................................................................................................................................................................................................................................................................................2211.001.00-----------------------------------------------------------1.00------------------------------------------------------------
.................................................................................................................................CTGATCTTGGGGTTCCAC......................................................................................................................................................................................................................1811.001.00---------1.00--------------------------------------------------------------------------------------------------------------
...........GATTTGTGGTGCGTTCTGAG..........................................................................................................................................................................................................................................................................................................................................2011.001.00----------1.00-------------------------------------------------------------------------------------------------------------
................................CGTCTGTCCTGCGCCAAGA......................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------------------------------1.00--------------------------
..........AGATTTGTGGTGCGTTCTGAGCC........................................................................................................................................................................................................................................................................................................................................2311.001.00--------------------------------------1.00---------------------------------------------------------------------------------
............ATTTGTGGTGCGTTCTGA...........................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------1.00-------------------------------------------------------------
...........................................................GGGACCTGGACCTGGCTCCCGAGG......................................................................................................................................................................................................................................................................................2411.001.00----------1.00-------------------------------------------------------------------------------------------------------------
..............................................CAAGGTGAGTACGGGGACCT.......................................................................................................................................................................................................................................................................................................2011.001.00-------------------------------------------------------1.00----------------------------------------------------------------
...................................................................................................CGGGAGGGCGAGAAGGG.....................................................................................................................................................................................................................................................171.000.00------------------------------------------------------------------------------1.00-----------------------------------------
.............TTTGTGGTGCGTTCTGAGCC........................................................................................................................................................................................................................................................................................................................................2011.001.00--------1.00---------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................AAGGGAGGTAGGCCAGGGGGTG................................................................................................................................................221.000.00----------------------------------------------------------------1.00-------------------------------------------------------
............ATTTGTGGTGCGTTCTGAGC.........................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------------------------------------1.00-------------------------------------------------------------------
.............TTTGTGGTGCGTTCTGAG..........................................................................................................................................................................................................................................................................................................................................1811.001.00-------------------------------------1.00----------------------------------------------------------------------------------
...........GATTTGTGGTGCGTTCTGAGCCGTCTGTCC................................................................................................................................................................................................................................................................................................................................3011.001.00------------------------------------1.00-----------------------------------------------------------------------------------
.......TGCAGATTTGTGGTGCGTTCTGAGCCGT......................................................................................................................................................................................................................................................................................................................................2811.001.00------------------------------1.00-----------------------------------------------------------------------------------------
.....................................................AGTACGGGGACCTGGACCTGGCT.............................................................................................................................................................................................................................................................................................2311.001.00---------------------------------------------1.00--------------------------------------------------------------------------
.................................................GGTGAGTACGGGGACCTG......................................................................................................................................................................................................................................................................................................1811.001.00-----1.00------------------------------------------------------------------------------------------------------------------
...TGGCTGCAGATTTGTGGGGCG.................................................................................................................................................................................................................................................................................................................................................211.000.00--------------------1.00---------------------------------------------------------------------------------------------------
.......................GTTCTGAGCCGTCTGTCCTG..............................................................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------1.00---------------------
................................................................................................................................................................................................................................................................................................................................CTTGGCCTTGAGAGGCGAT......................191.000.00----------------------1.00-------------------------------------------------------------------------------------------------
...........................................................................................................CGAGAAGCCGCCTTGGCCCCAGC.......................................................................................................................................................................................................................................2311.001.00----------------------------------------------------------------------------------------------1.00-------------------------
.........................TCTGAGCCGTCTGTCCTG..............................................................................................................................................................................................................................................................................................................................1821.001.00---------------------------------------------------------------------------------------------------------------0.50--0.50-----
.................TGGTGCGTTCTGAGCC........................................................................................................................................................................................................................................................................................................................................1611.001.00---------------------------------------------------------1.00--------------------------------------------------------------
.......................GTTCTGAGCCGTCTGTCCTGC.............................................................................................................................................................................................................................................................................................................................2111.001.00-----------------------------------------------1.00------------------------------------------------------------------------
.GTTGGCTGCAGATTTGTGGTGCG.................................................................................................................................................................................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------------------------------------------1.00----------
............................................................................................GCGGGGGCGGGAGGG..............................................................................................................................................................................................................................................................1501.001.00---------------1.00--------------------------------------------------------------------------------------------------------
...................GTGCGTTCTGAGCCGTCTG...................................................................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------1.00-----------------------------------------------------------------------------
..TTGGCTGCAGATTTGTGGTGCG.................................................................................................................................................................................................................................................................................................................................................2211.001.00-------1.00----------------------------------------------------------------------------------------------------------------
..........................CTGAGCCGTCTGTCCTGCGCCAAGGTGAGTACGGGG...........................................................................................................................................................................................................................................................................................................3611.001.00-------------------------------------------------------------------------1.00----------------------------------------------
............................GAGCCGTCTGTCCTGCGCCAAGATGC...................................................................................................................................................................................................................................................................................................................261.000.00---1.00--------------------------------------------------------------------------------------------------------------------
......................................................GTACGGGGACCTGGACCTG................................................................................................................................................................................................................................................................................................1911.001.00----------1.00-------------------------------------------------------------------------------------------------------------
..........................CTGAGCCGTCTGTCCTGCGCCAA........................................................................................................................................................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------------------------------1.00----------------------
..........................CTGAGCCGTCTGTCCTGC.............................................................................................................................................................................................................................................................................................................................1821.001.00--0.50-------------0.50-------------------------------------------------------------------------------------------------------
...................GTGCGTTCTGAGCCGTCTGT..................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------1.00-------------------------------------------------------------------------------------------------
................................................AGGTGAGTACGGGGACC........................................................................................................................................................................................................................................................................................................1711.001.00---------------------------------------------------------------------1.00--------------------------------------------------
..........................................................................................CGGCGGGGGCGGGAGGGC.............................................................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------------------------1.00--------------------------------------
..............................................................................................GGGGGCGGGAGGGCG............................................................................................................................................................................................................................................................1501.001.00---------------1.00--------------------------------------------------------------------------------------------------------
..........................................................GGGGACCTGGACCTGGCTC............................................................................................................................................................................................................................................................................................1911.001.00----------1.00-------------------------------------------------------------------------------------------------------------
.......TGCAGATTTGTGGTGCGTTCTGA...........................................................................................................................................................................................................................................................................................................................................2311.001.00-------------------------------------------------------------1.00----------------------------------------------------------
...............TGTGGTGCGTTCTGAGCCGTC.....................................................................................................................................................................................................................................................................................................................................2111.001.00-----------------------------------------------1.00------------------------------------------------------------------------
..................................................GTGAGTACGGGGACCTGGA....................................................................................................................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------------------1.00------------------------
...................................................TGAGTACGGGGACCTGGA....................................................................................................................................................................................................................................................................................................1811.001.00----1.00-------------------------------------------------------------------------------------------------------------------
......................................................GTACGGGGACCTGGAC...................................................................................................................................................................................................................................................................................................1611.001.00--1.00---------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTACGGGGACCTGGACCTGGCT.............................................................................................................................................................................................................................................................................................2611.001.00----------------------------1.00-------------------------------------------------------------------------------------------
..........AGATTTGTGGTGCGTTCTGAGCCGTCTGTCCTGCG............................................................................................................................................................................................................................................................................................................................3511.001.00-1.00----------------------------------------------------------------------------------------------------------------------
...........GATTTGTGGTGCGTTCTGAGCC........................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------1.00-------------------------------------------------
....................................................GAGTACGGGGACCTGGACCTGGC..............................................................................................................................................................................................................................................................................................2311.001.00-----1.00------------------------------------------------------------------------------------------------------------------
.................................GTCTGTCCTGCGCCAAGGTGAGTACGG.............................................................................................................................................................................................................................................................................................................2711.001.00------1.00-----------------------------------------------------------------------------------------------------------------
.............TTTGTGGTGCGTTCTGAGCCGTCTG...................................................................................................................................................................................................................................................................................................................................2511.001.00--------------------------------------------------------------------1.00---------------------------------------------------
.........................TCTGAGCCGTCTGTCCTGCGCC..........................................................................................................................................................................................................................................................................................................................2211.001.00-------------------1.00----------------------------------------------------------------------------------------------------
..........................................................................................CGGCGGGGGCGGGAGGGCA............................................................................................................................................................................................................................................................1911.001.00----------------------1.00-------------------------------------------------------------------------------------------------
...........................................CGCCAAGGTGAGTACGGGGACCTGG.....................................................................................................................................................................................................................................................................................................2511.001.00--------------------------------------------------1.00---------------------------------------------------------------------
..............TTGTGGTGCGTTCTGAGC.........................................................................................................................................................................................................................................................................................................................................1811.001.00---------------------------1.00--------------------------------------------------------------------------------------------
.....................GCGTTCTGAGCCGTCTGTCCT...............................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------------------------1.00---------------------------------------------------------------
......CTGCAGATTTGTGGTGCGTTCTGAGCCG.......................................................................................................................................................................................................................................................................................................................................2811.001.00-------1.00----------------------------------------------------------------------------------------------------------------
..............TTGTGGTGCGTTCTGCGCC........................................................................................................................................................................................................................................................................................................................................191.000.001.00-----------------------------------------------------------------------------------------------------------------------
......CTGCAGATTTGTGGTGCGTTCTGAGCCGTCT....................................................................................................................................................................................................................................................................................................................................3111.001.00---1.00--------------------------------------------------------------------------------------------------------------------
.................TGGTGCGTTCTGAGC.........................................................................................................................................................................................................................................................................................................................................1530.670.67-----------------0.33--------------------------------------------------------------------------------------------------0.33---
...............TGTGGTGCGTTCTGAG..........................................................................................................................................................................................................................................................................................................................................1620.500.50----------------------------------------------------------------------------------------------------------------0.50-------
..TTGGCTGCAGATTTGTG......................................................................................................................................................................................................................................................................................................................................................1720.500.50--------0.50---------------------------------------------------------------------------------------------------------------
..............TTGTGGTGCGTTCTGA...........................................................................................................................................................................................................................................................................................................................................1620.500.50----------0.50-------------------------------------------------------------------------------------------------------------
........................TTCTGAGCCGTCTGTCCT...............................................................................................................................................................................................................................................................................................................................1820.500.50------------------------------------------------0.50-----------------------------------------------------------------------
..........................................................................................CGGCGGGGGCGGGAGGG..............................................................................................................................................................................................................................................................1730.330.33-------------------------------------------------------------------------------------------------------------------0.33----
............................................................................................GCGGGGGCGGGAGGGCG............................................................................................................................................................................................................................................................1740.250.25---------------------------------------------------0.25--------------------------------------------------------------------
..TTGGCTGCAGATTTGT.......................................................................................................................................................................................................................................................................................................................................................1690.110.11----------------------------------------------------------------------------------------------------------------------0.11-

Antisense strand
AGTTGGCTGCAGATTTGTGGTGCGTTCTGAGCCGTCTGTCCTGCGCCAAGGTGAGTACGGGGACCTGGACCTGGCTCCCGAGGTGCGAGACGGCGGGGGCGGGAGGGCGAGAAGCCGCCTTGGCCCCAGCTGATCTTGGGGTTCCACCCCTCCGCCGGCACGCGCCTGCTTTTCTGCCCGGCTTTCCCTTCTCTGAAGGGAGGTAGGCCAGGGTCGGTTGCCAGAGGGAAGCATCGCCTAGGCCTGCGCCGCGTTTCCCTCCTTGGCCTTAACGCGCTCAGTGCACCTGAATTCTCCCACGGTTTTGACAGGGAGCGTACCTTGGCCTTGAGAGGTTCAGCTGCCTAACCCAGAGGCTACG
..................................................((.....(((....)))..(((.(((((((..((.....))..))))))))))...)).............................................................................................................................................................................................................................................................
..................................................51..........................................................111........................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		GSM339994(GSM339994)
hues6. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359191(GSM359191)
HepG2_3pM_5. (cell line)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR040024(GSM532909)
G613N. (cervix)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)		GSM359190(GSM359190)
HepG2_3pM_4. (cell line)		GSM359189(GSM359189)
HepG2_2pm_3. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343337
....................................................................................................................................................................GCCGGGCAGAAAAGCAGG................................................................................................................................................................................... 1815.005.00-----------4.00-----------------------------------------------------------------------1.00------------------------------------
...............................................................................................................................................................................GAGAAGGGAAAGCCGGGC........................................................................................................................................................................ 1821.501.50-------------------------------------------------1.50----------------------------------------------------------------------
.......................................................................................................................................................................................................................GGTTGCCAGAGGGAATTTG............................................................................................................................... 191.000.00-----------------------------------------------------------------------------1.00------------------------------------------
...........................................................................................GGCGGGGGCGGGAGGGCTCTG......................................................................................................................................................................................................................................................... 211.000.00--------------------------------------------------------------------------1.00---------------------------------------------
.........................................................................................CCTCCCGCCCCCGCCGT............................................................................................................................................................................................................................................................... 1730.330.33--------------------------------------------------0.33---------------------------------------------------------------------
.............................................................................................CGCCCTCCCGCCCCCG............................................................................................................................................................................................................................................................ 1650.200.20---------------------------------------------------------------------------------------------------------------------0.20--
............................................................................................GCCCTCCCGCCCCCGC............................................................................................................................................................................................................................................................. 1690.110.11-----------------------------------------------------------------------------------------------------------------------0.11