ID: uc001xhd.3_intron_0_0_chr14_64932332_f.5p
GENE: (1)
chr14:64932282-64932531+


(1)
AGO2.ip 		(3)
B-CELL 		(1)
BRAIN 		(6)
BREAST 		(6)
CELL-LINE 		(10)
CERVIX 		(1)
FIBROBLAST 		(1)
HELA 		(1)
LIVER 		(5)
OTHER 		(9)
SKIN 		(1)
TESTES 		(2)
UTERUS

Sense strand
GCGCGCCGCCACCTCGGGAGCAGTGTTGGCCAAGGACCCCGACGCCCTACGTAAGTAAAGGCAGGGCGGGGAGCCTGCGGGGGAGGAGGGTCGGGGGCAATGTCCGGTCCGCGGACCGCGGAGTGGGCAAGAGGTGCCCACTGGATACGGGGTATCCGAGCCCTCTGAGGTGCTGGGAGTAAGAACGCGGGAGGTCGCTTGTCCGCTGGAATCCGCGGCCAGGGCGACCCTCATCAGGTCTGCCCACCTA
.........................................................................((.(((.....(((((((...(((((.((((((.((((((...)))))).)))))).....)))))...((((((...))))))..)))))))....))).))..........................................................................
.........................................................................74............................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040019(GSM532904)
G701T. (cervix)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		GSM532876(GSM532876)
G547T. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR040028(GSM532913)
G026N. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040009(GSM532894)
G727T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)
..................................................................................................................................................................CTCTGAGGTGCTGGGGTG......................................................................1811.000.00--5.00-1.00-2.00-----1.00-----------1.00-----------1.00---------
..............................................................................GGGGGAGGAGGGTCGGGGCGGC......................................................................................................................................................227.000.00-4.00--1.001.00-------------------------------1.00--------
..............................................................................GGGGGAGGAGGGTCGGGGC.........................................................................................................................................................196.000.001.001.00--1.00---------1.00-------1.00---------------1.00-------
..............................................................................GGGGGAGGAGGGTCGGGGCGG.......................................................................................................................................................214.000.00-1.00-1.001.00---1.00-------------------------------------
..............................................................................GGGGGAGGAGGGTCGGG...........................................................................................................................................................1713.003.00---1.00---------------------------1.00-1.00------------
..............................................................................GGGGGAGGAGGGTCGGGGCG........................................................................................................................................................203.000.001.00----1.00--1.00-------------------------------------
..............................................................................GGGGGAGGAGGGTCGTTTT.........................................................................................................................................................192.000.00----------1.00----1.00------------------------------
...............................................................................GGGGAGGAGGGTCGGGGCGG.......................................................................................................................................................2032.000.671.67--0.33------------------------------------------
...............................................................................GGGGAGGAGGGTCGGGGCG........................................................................................................................................................1931.670.671.67---------------------------------------------
...............................................................................GGGGAGGAGGGTCGGGGCGGC......................................................................................................................................................2131.330.670.33--0.67------------------------------------0.33-----
....................................................................................GGAGGGTCGGGGGCATCA....................................................................................................................................................181.000.00----------------1.00-----------------------------
.................................................................GCGGGGAGCCTGCGGCTT.......................................................................................................................................................................181.000.00----------------------------1.00-----------------
..............................................................................GGGGGAGGAGGGTCGGGGA.........................................................................................................................................................191.000.00-----------1.00----------------------------------
.......................TGTTGGCCAAGGACCCCGACGCCCTACGCTG....................................................................................................................................................................................................311.000.00---------1.00------------------------------------
...................................................................................................................................................................................................................TCCGCGGCCAGGGCGAAGAG...................201.000.00-------------1.00--------------------------------
................................................................GGCGGGGAGCCTGCGGCTT.......................................................................................................................................................................191.000.00-------------------1.00--------------------------
..............................................................................GGGGGAGGAGGGTCGGGTGG........................................................................................................................................................2011.003.00---------------------1.00------------------------
.........................................................AAGGCAGGGCGGGGAAGGT..............................................................................................................................................................................191.000.00---------------------------1.00------------------
..............................................................................GGGGGAGGAGGGTCGTT...........................................................................................................................................................171.000.00----------------------------------1.00-----------
...............................................................................GGGGAGGAGGGTCGGGGGGG.......................................................................................................................................................201.000.001.00---------------------------------------------
................................................................................GGGAGGAGGGTCGGGGGA........................................................................................................................................................181.000.00-----------------------------1.00----------------
.................................................................................GGAGGAGGGTCGGGGGG........................................................................................................................................................171.000.001.00---------------------------------------------
..............................................................................GGGGGAGGAGGGTCGGGGGGGC......................................................................................................................................................2211.001.00-----------------1.00----------------------------
..............................................................................GGGGGAGGAGGGTCGGGGG.........................................................................................................................................................1911.001.00-1.00--------------------------------------------
........................................................................................................................................................................GGTGCTGGGAGTAAGGC.................................................................171.000.00------------------------------1.00---------------
..............................................................................GGGGGAGGAGGGTCGGGTC.........................................................................................................................................................1911.003.00---1.00------------------------------------------
.......................................................................................................................................................................................AACGCGGGAGGTCGCAGTG................................................191.000.00--------------------------------1.00-------------
....................................................................................................................................................................................AAGAACGCGGGAGGTAG.....................................................171.000.00---------1.00------------------------------------
..............................................................................GGGGGAGGAGGGTCGGGGGGGT......................................................................................................................................................2211.001.00-------------------------1.00--------------------
...............................................................................GGGGAGGAGGGTCGGGGGG........................................................................................................................................................191.000.00-----------------------1.00----------------------
.....................................................................................................................................................................TGAGGTGCTGGGAGTGAAG..................................................................191.000.00--------------------------1.00-------------------
..............................................................................GGGGGAGGAGGGTCGGGGTGGT......................................................................................................................................................221.000.00-----1.00----------------------------------------
...............................................................................GGGGAGGAGGGTCGGGG..........................................................................................................................................................1730.670.67---0.33-------0.33----------------------------------
...............................................................................GGGGAGGAGGGTCGGGGC.........................................................................................................................................................1830.670.670.33-----------------------------------------0.33---
..............................................................................GGGGGAGGAGGGTCGG............................................................................................................................................................1620.500.50---------------------------------------0.50------
..................................................................CGGGGAGCCTGCGGG.........................................................................................................................................................................1540.500.50-------------------------------------------0.250.25-
...............................................................................GGGGAGGAGGGTCGGGGAGGC......................................................................................................................................................2130.330.67---0.33------------------------------------------
...............................................................................GGGGAGGAGGGTCGGGGCCGC......................................................................................................................................................2130.330.67-----------------------------------------0.33----
...............................................................................GGGGAGGAGGGTCGGGGCGT.......................................................................................................................................................2030.330.670.33---------------------------------------------
...............................................................................GGGGAGGAGGGTCGGGGAGGT......................................................................................................................................................2130.330.67-0.33--------------------------------------------
..................................................................CGGGGAGCCTGCGGGC........................................................................................................................................................................1640.250.50---------------------------------------------0.25

Antisense strand
GCGCGCCGCCACCTCGGGAGCAGTGTTGGCCAAGGACCCCGACGCCCTACGTAAGTAAAGGCAGGGCGGGGAGCCTGCGGGGGAGGAGGGTCGGGGGCAATGTCCGGTCCGCGGACCGCGGAGTGGGCAAGAGGTGCCCACTGGATACGGGGTATCCGAGCCCTCTGAGGTGCTGGGAGTAAGAACGCGGGAGGTCGCTTGTCCGCTGGAATCCGCGGCCAGGGCGACCCTCATCAGGTCTGCCCACCTA
.........................................................................((.(((.....(((((((...(((((.((((((.((((((...)))))).)))))).....)))))...((((((...))))))..)))))))....))).))..........................................................................
.........................................................................74............................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040019(GSM532904)
G701T. (cervix)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		GSM532876(GSM532876)
G547T. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR040028(GSM532913)
G026N. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040009(GSM532894)
G727T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)
.........................................................................................................................................................ACCTCAGAGGGCTCGGAT............................................................................... 1812.002.00-------2.00--------------------------------------
..............................................................................GGGGGAGGAGGGTCGGGAGT........................................................................................................................................................ 2011.000.00------------------1.00---------------------------
....................................................................................................................................................................................ACCTCCCGCGTTCTT....................................................... 1511.001.00-----------------------------------1.00----------
..................................................................................................................................................................................GTAAGAACGCGGGAGCCCA..................................................... 191.000.00--------------------1.00-------------------------
..........................................................................................................................................................................................CCAGCGGACAAGCGACCTCCCGC......................................... 2311.001.00----------1.00-----------------------------------