ID: uc001wio.3_intron_10_0_chr14_23537881_r.5p
GENE: (1)
chr14:23538485-23538734-


(1)
AGO2.ip 		(3)
B-CELL 		(4)
BRAIN 		(5)
BREAST 		(13)
CELL-LINE 		(4)
CERVIX 		(1)
HEART 		(5)
LIVER 		(2)
OTHER 		(15)
SKIN 		(1)
TESTES

Sense strand
GCAATGATGACCGCCCGGAGGGCAGTGTTGAAGATGAGGAGAAGAAAGAGGTAAACATCCAAGCCACCTATTGGGGCGGGTGGGCAGGAATGGACCTAGGGGAAAGAGTAGAGCACTCTAGTGATCCCTCTTACACGGTGGGTTAACTTAAAGGAGGGATGAGGCAGGGACTTGGATCAGAATAGGGCCAAGGGAGAATTCGCTGGTTTAGCAAGGGAGACCCCTTGTGACGGGGACAGGGCTCATTCAT
.........................................................................................................((((...((.(((.....(((((((((....(((......)))...))))))))))))))....)))).............................................................................
....................................................................................................101.....................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR343335GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189783SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782SRR040023(GSM532908)
G575T. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040017(GSM532902)
G645T. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................AGATGAGGAGAAGAAAGAG........................................................................................................................................................................................................1915.005.00-----------------2.00--------1.00-----1.00--------1.00--------------
.....................................................................................................................................................AAAGGAGGGATGAGGCAGGG.................................................................................2014.004.00---4.00----------------------------------------------------
.....................................................................................................................................................AAAGGAGGGATGAGGCAGGGACCTGG...........................................................................264.000.001.003.00------------------------------------------------------
................GGAGGGCAGTGTTGAAGAT.......................................................................................................................................................................................................................1913.003.00--2.00-1.00---------------------------------------------------
.........................................................................................................GAGTAGAGCACTCTAGTG...............................................................................................................................1813.003.00---------3.00----------------------------------------------
.......................................................................................................................................................AGGAGGGATGAGGCAGGGACCGG............................................................................2312.001.002.00-------------------------------------------------------
.......................................................................................................................................................AGGAGGGATGAGGCAGGGACCCGG...........................................................................2412.001.002.00-------------------------------------------------------
......................................................................................................................................................AAGGAGGGATGAGGCAGGGACCCGG...........................................................................252.000.002.00-------------------------------------------------------
..................................................................................................................................................................................................AGAATTCGCTGGTTTAGCAAGGG.................................2312.002.00--------------2.00-----------------------------------------
................................................................................................TAGGGGAAAGAGTAGAGCA.......................................................................................................................................1912.002.00------1.00-1.00-----------------------------------------------
.....................................................................................................................CTAGTGATCCCTCTTACACGGTGGG............................................................................................................2512.002.00-------------2.00------------------------------------------
.......................................................................................................................................................................................AGGGCCAAGGGAGAATTCGCTGGTTT.........................................2612.002.00----------2.00---------------------------------------------
......................................................................................................................................................AAGGAGGGATGAGGCAGGGACTCGG...........................................................................252.000.001.001.00------------------------------------------------------
...................................................................................................................................................................GCAGGGACTTGGATCAGAATAGGG...............................................................2412.002.00------------1.00------1.00------------------------------------
.............................GAAGATGAGGAGAAGAAAGAG........................................................................................................................................................................................................2112.002.00-------1.00----------------1.00-------------------------------
........................................GAAGAAAGAGGTAAACATCCAAGCC.........................................................................................................................................................................................2512.002.00--------------------2.00-----------------------------------
......................................................................................................................................................AAGGAGGGATGAGGCAGGGACCTGG...........................................................................252.000.002.00-------------------------------------------------------
.......................................................................................................................................................AGGAGGGATGAGGCAGGGACTCGG...........................................................................242.000.002.00-------------------------------------------------------
....................................................................................CAGGAATGGACCTAGGGGAA..................................................................................................................................................2011.001.00-----------1.00--------------------------------------------
.................................................................................................................................................................AGGCAGGGACTTGGATCAGAATAGGGCC.............................................................2811.001.00------------------------------1.00-------------------------
............................TGAAGATGAGGAGAAGAAAGAGTACC....................................................................................................................................................................................................2611.001.00-------------------------------------------1.00------------
................................GATGAGGAGAAGAAAGAG........................................................................................................................................................................................................1831.001.00----------------------------------------------------0.330.330.33-
...............CGGAGGGCAGTGTTGAAGATG......................................................................................................................................................................................................................2111.001.00----------------------------1.00---------------------------
...................................................................................................................................................................................................................................TGACGGGGACAGGGCTCATTCTCC241.000.001.00-------------------------------------------------------
.................................................................................................................................................ACTTAAAGGAGGGATGAGGCAGG..................................................................................2311.001.00--1.00-----------------------------------------------------
........................GTGTTGAAGATGAGGAGAAGAAAGAG........................................................................................................................................................................................................2611.001.00----------------------1.00---------------------------------
...............................................................................................................................................................TGAGGCAGGGACTTGGATAG.......................................................................201.000.00---------------1.00----------------------------------------
...................................................................................................................................................................GCAGGGACTTGGATCAGAATAGGGCC.............................................................2611.001.00------------1.00-------------------------------------------
.....................................................................................................................................................AAAGGAGGGATGAGGCAGGGACTTGGACCA.......................................................................301.000.00-1.00------------------------------------------------------
............................................................................................................................................................GGATGAGGCAGGGACTTGGAT.........................................................................2111.001.00------1.00-------------------------------------------------
.....................................................................................................................................................AAAGGAGGGATGAGGCAGGGACTTGG...........................................................................2611.001.001.00-------------------------------------------------------
...............................................................................................CTAGGGGAAAGAGTAGAGCACTC....................................................................................................................................2311.001.00-------------------------------------------------1.00------
....................................................................................................................................................................................AATAGGGCCAAGGGAGAATTCGCTGGTTCAGC......................................321.000.00-1.00------------------------------------------------------
...........................................GAAAGAGGTAAACATCCAAGCCACCTA....................................................................................................................................................................................2711.001.00---------------------------1.00----------------------------
.....................................................................................................................................................................................................................................ACGGGGACAGGGCTCATTC..1911.001.00-------------------1.00------------------------------------
......................................................................................................................................................AAGGAGGGATGAGGCAGGGACTTGGACC........................................................................281.000.001.00-------------------------------------------------------
..............................................................................................CCTAGGGGAAAGAGTAGAGCAC......................................................................................................................................2211.001.00---------------1.00----------------------------------------
.......................................................................................................................................................................................AGGGCCAAGGGAGAATTCGCTGGTTTA........................................2711.001.00-------------------------1.00------------------------------
............................................................................................................................................................................TGGATCAGAATAGGGCCAAGGGA.......................................................2311.001.00----1.00---------------------------------------------------
.............................................................................................................................................................................................AAGGGAGAATTCGCTGGTTTAGCAAG...................................2611.001.00----------------------------------------------1.00---------
........................................................................................................AGAGTAGAGCACTCTAGTGAT.............................................................................................................................2111.001.00----1.00---------------------------------------------------
.......................................AGAAGAAAGAGGTAAACATCCAAGCCA........................................................................................................................................................................................2711.001.00--------------------------------------1.00-----------------
...........................................................................................GGACCTAGGGGAAAGAGTAGAGC........................................................................................................................................2311.001.00----------1.00---------------------------------------------
.....................................................................................................................................................................AGGGACTTGGATCAGAATAGGGCCA............................................................2511.001.00--1.00-----------------------------------------------------
.......................................................................................................................................................................GGACTTGGATCAGAAGGCA................................................................191.000.00--------1.00-----------------------------------------------
...............................AGATGAGGAGAAGAAAGAGATCT....................................................................................................................................................................................................2311.005.00-----------1.00--------------------------------------------
.....................................................................ATTGGGGCGGGTGGGCAGGAATGGACCT.........................................................................................................................................................2811.001.00-1.00------------------------------------------------------
...........................................................................................................GTAGAGCACTCTAGTGATCCCTCT.......................................................................................................................2411.001.00-------------------------------------1.00------------------
..............CCGGAGGGCAGTGTTGAAGATGAGGAGA................................................................................................................................................................................................................2811.001.00---------------------------------------1.00----------------
..............CCGGAGGGCAGTGTTGAAGATGAGGAG.................................................................................................................................................................................................................2711.001.00-----------------------------------------------1.00--------
.....................................................................................................................................................................................................ATTCGCTGGTTTAGCAAGGGAGACCCC..........................2711.001.00-1.00------------------------------------------------------
............GCCCGGAGGGCAGTGTTGAAGATG......................................................................................................................................................................................................................2411.001.00----------------1.00---------------------------------------
...........................................................................................................................................................GGGATGAGGCAGGGAAGCC............................................................................191.000.00------1.00-------------------------------------------------
.......................................................................TGGGGCGGGTGGGCAGGAATGGACCTAGGG.....................................................................................................................................................3011.001.00-----1.00--------------------------------------------------
..........................................................................................................................................................AGGGATGAGGCAGGGACTTGGATC........................................................................2411.001.00----------------------------------1.00---------------------
..........................GTTGAAGATGAGGAGAAGAAAGAG........................................................................................................................................................................................................2411.001.00-----------------------------------1.00--------------------
................................................................................................................................................AACTTAAAGGAGGGATGAGGC.....................................................................................2111.001.00-------1.00------------------------------------------------
......................CAGTGTTGAAGATGAGGAGAAGAAAGAG........................................................................................................................................................................................................2811.001.00------------------------------------1.00-------------------
............................TGAAGATGAGGAGAAGAAAGAG........................................................................................................................................................................................................2211.001.00--------------------------------------------1.00-----------
.................................................................................................................................CTTACACGGTGGGTTAACTTAAAGGAG..............................................................................................2711.001.00--------1.00-----------------------------------------------
.....................................................................................................................................................................................ATAGGGCCAAGGGAGAATTCGCTGGC...........................................261.000.001.00-------------------------------------------------------
.................GAGGGCAGTGTTGAAGATGAG....................................................................................................................................................................................................................2111.001.00----1.00---------------------------------------------------
.............................GAAGATGAGGAGAAGAAAGAGGT......................................................................................................................................................................................................2311.001.001.00-------------------------------------------------------
..........................................................................................................................................................AGGGATGAGGCAGGGACTT.............................................................................1911.001.00-----------------------1.00--------------------------------
..........................GTTGAAGATGAGGAGAAGAA............................................................................................................................................................................................................2011.001.00----------------1.00---------------------------------------
..........................................................................................TGGACCTAGGGGAAAGAGTAGAGCA.......................................................................................................................................2511.001.00---------------------------------------------1.00----------
......................................................................................................................................................................................................................GGGAGACCCCTTGTGAA...................171.000.00---------------------1.00----------------------------------
....................................................................................CAGGAATGGACCTAGG......................................................................................................................................................1611.001.00----------------------------------------1.00---------------
.......................................................................................................................................................AGGAGGGATGAGGCAGGGACTTGGATA........................................................................271.000.00--1.00-----------------------------------------------------
...............................AGATGAGGAGAAGAAAGAGAGCT....................................................................................................................................................................................................2311.005.00-----------1.00--------------------------------------------
...........................................................................................................GTAGAGCACTCTAGTGATCCCTCTTAC....................................................................................................................2711.001.00--1.00-----------------------------------------------------
.......................................................................................................................................................AGGAGGGATGAGGCAGGGAC...............................................................................2011.001.001.00-------------------------------------------------------
.................GAGGGCAGTGTTGAAGATGAGGAGAAGAAA...........................................................................................................................................................................................................3011.001.00-----1.00--------------------------------------------------
.......................................................................................................................................................AGGAGGGATGAGGCAGGGACTTGGATC........................................................................2711.001.00--1.00-----------------------------------------------------
...ATGATGACCGCCCGGAGGG....................................................................................................................................................................................................................................1911.001.00-----------------------------1.00--------------------------
...................................................................................................................................................TTAAAGGAGGGATGAGGCAGGGACTCG............................................................................271.000.00------------------------------------------------1.00-------
..................AGGGCAGTGTTGAAGATGAGAAG.................................................................................................................................................................................................................231.000.00-----1.00--------------------------------------------------
...................................GAGGAGAAGAAAGAGGTGATA..................................................................................................................................................................................................211.000.00-------------------------------1.00------------------------
.......................................................................................................................................................AGGAGGGATGAGGCACAG.................................................................................181.000.00------------------------------------------1.00-------------
......ATGACCGCCCGGAGG.....................................................................................................................................................................................................................................1520.500.50---------------------0.50----------------------------------
................................................................................................TAGGGGAAAGAGTAGAG.........................................................................................................................................1720.500.50-----0.50--------------------------------------------------
.................................ATGAGGAGAAGAAAGAGGACTG...................................................................................................................................................................................................2230.330.33--------------------------------------------------0.33-----
.................................ATGAGGAGAAGAAAGAGG.......................................................................................................................................................................................................1830.330.33-------------------------------------------------------0.33
...................................................................................................................................................................................GAATAGGGCCAAGGG........................................................1580.120.12-----0.12--------------------------------------------------

Antisense strand
GCAATGATGACCGCCCGGAGGGCAGTGTTGAAGATGAGGAGAAGAAAGAGGTAAACATCCAAGCCACCTATTGGGGCGGGTGGGCAGGAATGGACCTAGGGGAAAGAGTAGAGCACTCTAGTGATCCCTCTTACACGGTGGGTTAACTTAAAGGAGGGATGAGGCAGGGACTTGGATCAGAATAGGGCCAAGGGAGAATTCGCTGGTTTAGCAAGGGAGACCCCTTGTGACGGGGACAGGGCTCATTCAT
.........................................................................................................((((...((.(((.....(((((((((....(((......)))...))))))))))))))....)))).............................................................................
....................................................................................................101.....................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR343335GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189783SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782SRR040023(GSM532908)
G575T. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040017(GSM532902)
G645T. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................AGATGAGGAGAAGAAAGAAG....................................................................................................................................................................................................... 202.000.00------------------2.00-------------------------------------
....................................................................................................................TAAGAGGGATCACTAGA..................................................................................................................... 1711.001.00-------1.00------------------------------------------------
.......................................................................................................................................................TCCAAGTCCCTGCCTCATCCCTCCT.......................................................................... 2511.001.00---------------------------------1.00----------------------
..................................................................................................GCTCTACTCTTTCCCC........................................................................................................................................ 1630.330.33---------------------------------------------------0.33----