ID: uc001vmd.3_intron_29_0_chr13_95900008_r.5p
GENE: (1)
chr13:95953295-95953544-


(1)
AGO2.ip
(3)
B-CELL
(1)
BRAIN
(6)
BREAST
(16)
CELL-LINE
(8)
CERVIX
(1)
HEART
(2)
HELA
(1)
KIDNEY
(3)
LIVER
(3)
OTHER
(1)
RRP40.ip
(21)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
AAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGGTGAGTGTCCCCGCCCGAAACAGGTCACCCTGCAGCCGCTGGCGCCGCGGACGCACTCTCCCGGGGCCGCGCCCGATGCTGCCCAAGCCCTCTGCGGCTGGGGGCGAGGGGAGCGCTTTCCTACGCCACGCGGTCCACGCCGGGGCTTTCTGCTGCGGGTGGCGCCGCCCCCACGCCGGCCGCGTGGTCCCTGCCTGCGC
....................................................((((((..((((......((((....))))..(((...)))...))))..))))))...((((......)))).............................................................................................................................
..................................................51...............................................................................132....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR040043(GSM532928)
G428T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040042(GSM532927)
G428N. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR040011(GSM532896)
G529T. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR029130(GSM416759)
DLD2. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR343337SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
TAX577743(Rovira)
total RNA. (breast)
.............................................................................................................CCCGGGGCCGCGCCCGGGG..........................................................................................................................1947.000.00---30.0016.00-----1.00----------------------------------------------------------
.............................................................................................................CCCGGGGCCGCGCCCGGGGA.........................................................................................................................206.000.00---4.002.00----------------------------------------------------------------
..................................CACGCGTGTTCTTCTGGTGGC...................................................................................................................................................................................................213.000.00----------------1.00------------------------------1.00---1.00-----------------
................................................TGGTGAGTGTCCCCGC..........................................................................................................................................................................................1632.332.33------------------0.670.33-0.330.33------------------------------------0.33-0.33-------
................................................TGGTGAGTGTCCCCGCC.........................................................................................................................................................................................1712.002.00-----------------------1.00------------------1.00--------------------------
..........................................................................................GGCGCCGCGGACGCACTC..............................................................................................................................................1812.002.00-----------------2.00---------------------------------------------------
..................................CACGCGTGTTCTTCTGGTGGCT..................................................................................................................................................................................................222.000.00---------------1.00------------1.00----------------------------------------
..................................CACGCGTGTTCTTCTGGT......................................................................................................................................................................................................1812.002.00------------2.00--------------------------------------------------------
..............GCAGGACGCGAACCTCTGCTCACGCGT.................................................................................................................................................................................................................2712.002.00-------2.00-------------------------------------------------------------
..............................................................................................................CCGGGGCCGCGCCCGGGG..........................................................................................................................182.000.00----2.00----------------------------------------------------------------
.......ACCCGCTGCAGGACGCGAA................................................................................................................................................................................................................................1912.002.00---------2.00-----------------------------------------------------------
..................................................GTGAGTGTCCCCGCCTGTC.....................................................................................................................................................................................1952.000.60---------------------------------------1.00------------1.00----------------
...................ACGCGAACCTCTGCTCACGCG..................................................................................................................................................................................................................2112.002.00--------------2.00------------------------------------------------------
..................................CACGCGTGTTCTTCTGGTGGT...................................................................................................................................................................................................211.000.00----------------------1.00----------------------------------------------
..................................................................................................GGACGCACTCTCCCGTA.......................................................................................................................................171.000.00-----------------------------1.00---------------------------------------
..................................CACGCGTGTTCTTCTGGTGGCA..................................................................................................................................................................................................221.000.00---------------------1.00-----------------------------------------------
..............................................................................................................................................TGCGGCTGGGGGCGAGCA..........................................................................................181.000.00--------1.00------------------------------------------------------------
.............................................................................................................CCCGGGGCCGCGCCCGGCG..........................................................................................................................191.000.00---1.00-----------------------------------------------------------------
....................................................................................GCCGCTGGCGCCGCGGTCCC..................................................................................................................................................201.000.00------------------------------------------------1.00--------------------
.................................TCACGCGTGTTCTTCTGGTGGC...................................................................................................................................................................................................221.000.00-------1.00-------------------------------------------------------------
.............................................................................................................CCCGGGGCCGCGCCCGGGGC.........................................................................................................................201.000.00----1.00----------------------------------------------------------------
....................CGCGAACCTCTGCTCACGCGTG................................................................................................................................................................................................................2211.001.00-----1.00---------------------------------------------------------------
......AACCCGCTGCAGGACGCGAAC...............................................................................................................................................................................................................................2111.001.00-----1.00---------------------------------------------------------------
..........................................................................................................TCTCCCGGGGCCGCGCCCGGG...........................................................................................................................211.000.00------------------------------1.00--------------------------------------
.............................................................................................................CCCGGGGCCGCGCCCGGG...........................................................................................................................181.000.00----1.00----------------------------------------------------------------
................................CTCACGCGTGTTCTTCTGGTGGC...................................................................................................................................................................................................231.000.00-----------1.00---------------------------------------------------------
...............................................................................................CGCGGACGCACTCTCCC..........................................................................................................................................1711.001.00--------------------------------------------1.00------------------------
..................................................GTGAGTGTCCCCGCCT........................................................................................................................................................................................1651.000.60------------------1.00--------------------------------------------------
...............CAGGACGCGAACCTCTG..........................................................................................................................................................................................................................1711.001.00-------------------1.00-------------------------------------------------
..................................................GTGAGTGTCCCCGCCTG.......................................................................................................................................................................................1751.000.60-------------------------------1.00-------------------------------------
..................................CACGCGTGTTCTTCTGGTGG....................................................................................................................................................................................................201.000.00--------------------------------------1.00------------------------------
................................................................................................GCGGACGCACTCTCCCGGGG......................................................................................................................................2011.001.00-----1.00---------------------------------------------------------------
............................................................................................................TCCCGGGGCCGCGCCCGGGAG.........................................................................................................................211.000.00---1.00-----------------------------------------------------------------
.............................................................................................................CCCGGGGCCGCGCCCTCCA..........................................................................................................................191.000.00----------------------------------------1.00----------------------------
.......................................................................AGGTCACCCTGCAGCCGCTGG..............................................................................................................................................................2111.001.00---------------------------1.00-----------------------------------------
................................................TGGTGAGTGTCCCCGCCTGTC.....................................................................................................................................................................................2111.002.00----------1.00----------------------------------------------------------
..............................................................................................................CCGGGGCCGCGCCCGGG...........................................................................................................................171.000.00--------------------------------------------------1.00------------------
...........GCTGCAGGACGCGAACCTCTGCTC.......................................................................................................................................................................................................................2411.001.00---------------------------------------------1.00-----------------------
.............................................................................................GCCGCGGACGCACTCTCCC..........................................................................................................................................1911.001.00--------1.00------------------------------------------------------------
..............................................................................................................................................TGCGGCTGGGGGCGAGTC..........................................................................................181.000.00--------1.00------------------------------------------------------------
..........................................................................................................................................................................CTACGCCACGCGGTCCACGCCG..........................................................2211.001.00---------------------------------1.00-----------------------------------
................................................TGGTGAGTGTCCCCG...........................................................................................................................................................................................1550.800.80-------------------0.20--------------------------------------0.20----0.200.20----
.................................................GGTGAGTGTCCCCGCC.........................................................................................................................................................................................1630.670.67-0.33----------------------------------------------------------0.33--------
..................................................GTGAGTGTCCCCGCC.........................................................................................................................................................................................1550.600.60-----------------------0.20--------------------------------------0.20--0.20---
.................................................GGTGAGTGTCCCCGC..........................................................................................................................................................................................1570.290.29----------------------------------------------------------0.14-------0.14--

Antisense strand
AAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGGTGAGTGTCCCCGCCCGAAACAGGTCACCCTGCAGCCGCTGGCGCCGCGGACGCACTCTCCCGGGGCCGCGCCCGATGCTGCCCAAGCCCTCTGCGGCTGGGGGCGAGGGGAGCGCTTTCCTACGCCACGCGGTCCACGCCGGGGCTTTCTGCTGCGGGTGGCGCCGCCCCCACGCCGGCCGCGTGGTCCCTGCCTGCGC
....................................................((((((..((((......((((....))))..(((...)))...))))..))))))...((((......)))).............................................................................................................................
..................................................51...............................................................................132....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR040043(GSM532928)
G428T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040042(GSM532927)
G428N. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR040011(GSM532896)
G529T. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR029130(GSM416759)
DLD2. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR343337SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
TAX577743(Rovira)
total RNA. (breast)
..........................................................................................................................................................................CTACGCCACGCGGTCTGTA............................................................. 1966.000.0050.00-16.00------------------------------------------------------------------
..........................................................................................................................................................................CTACGCCACGCGGTCTGGA............................................................. 1946.000.0028.00-11.00---4.00------1.00-1.00-------------------------------------1.00---------------
..........................................................................................................................................................................CTACGCCACGCGGTCTTGA............................................................. 1933.000.0023.00-9.00----------1.00-------------------------------------------------------
....................................................................................................................CCGCGCCCGATGCTGCTCA................................................................................................................... 1919.000.00-19.00-------------------------------------------------------------------
....................................................................................................................CCGCGCCCGATGCTGTCA.................................................................................................................... 1816.000.00-16.00-------------------------------------------------------------------
..........................................................................................................................................................................CTACGCCACGCGGTCTTTA............................................................. 1915.000.0010.00-5.00------------------------------------------------------------------
....................................................................................................................CCGCGCCCGATGCTGCTC.................................................................................................................... 186.000.00-6.00-------------------------------------------------------------------
....................................................................................................................................................................ACCGCGTGGCGTAGGAAAGC.................................................................. 2013.003.00-----3.00---------------------------------------------------------------
....................................................................................................................CCGCGCCCGATGCTGTC..................................................................................................................... 173.000.00-2.00----------------------------------------------------1.00--------------
..........................................................................................................................................................................CTACGCCACGCGGTCTGT.............................................................. 182.000.002.00--------------------------------------------------------------------
..........................................................................................................................................................................CTACGCCACGCGGTCTGGT............................................................. 192.000.002.00--------------------------------------------------------------------
..................................................................................................................................................................................................................GGCGCCGCCCCCACGCGGG..................... 192.000.00-------1.00-----------------1.00-------------------------------------------
..........................................................................................................................................................................CTACGCCACGCGGTCTGG.............................................................. 182.000.00------1.00----------------------------------1.00---------------------------
.....................................................................................................................GCAGCATCGGGCGCG...................................................................................................................... 1521.501.50-1.00------------------------------------------------------0.50------------
.............................................................................CCCTGCAGCCGCTGGCGGGG......................................................................................................................................................... 201.000.00-------------------------------------------1.00-------------------------
.............................................................................................................................................................................................................................CACGCCGGCCGCGTGGT............ 171.000.00-------------------------------------------------1.00-------------------
............................................................................................................................................................................................CCACCCGCAGCAGAAAGCCCCGGC...................................... 2411.001.00-------------------------------------1.00-------------------------------
........................................CGGGGACACTCACCAGAAGAACA........................................................................................................................................................................................... 2311.001.00-----------1.00---------------------------------------------------------
............................................................CTGCAGGGTGACCTGTTTCGGGCGG..................................................................................................................................................................... 2511.001.00------------------------------------1.00--------------------------------
..........................................................................................................................................................................CTACGCCACGCGGTCTTGT............................................................. 191.000.001.00--------------------------------------------------------------------
............................................................................................................................................................................................CGCAGCAGAAAGCCCCGGC........................................... 1911.001.00-----------------------------------1.00---------------------------------
..................................................................................................................................................................................................................GGCGCCGCCCCCACGCGG...................... 181.000.00----------------------------------1.00----------------------------------
..............GCAGGACGCGAACCTCG........................................................................................................................................................................................................................... 171.000.00----------------1.00----------------------------------------------------
....................................................................................................................CCGCGCCCGATGCTGCTCG................................................................................................................... 191.000.00-1.00-------------------------------------------------------------------
..............................................................GTGACCTGTTTCGGGC............................................................................................................................................................................ 1611.001.00--------------------1.00------------------------------------------------
....................................................................................................................................................................................................................CGCCGCCCCCACGCCGGGC................... 191.000.00------------------------1.00--------------------------------------------
....................................................................................................................CCGCGCCCGATGCTGTTAG................................................................................................................... 191.000.00-1.00-------------------------------------------------------------------
..........................................................................................................................................................................CTACGCCACGCGGTCTTTT............................................................. 191.000.001.00--------------------------------------------------------------------
....................................................................................................................CCGCGCCCGATGCTGCCTCA.................................................................................................................. 201.000.00-1.00-------------------------------------------------------------------
..........................................................................................................................................................................CTACGCCACGCGGTCTGTG............................................................. 191.000.001.00--------------------------------------------------------------------
......................................................................................................................................................................................GAAAGCCCCGGCGTGGAC.................................................. 1811.001.00----------------------------------------------1.00----------------------
..............................................................................................................CCGGGGCCGCGCCCGACCTG........................................................................................................................ 201.000.00--------------------------1.00------------------------------------------
..........................................................................................................................................................................CTACGCCACGCGGTCTAGA............................................................. 191.000.001.00--------------------------------------------------------------------
.................................................................................................................................................................................................................CGTGGGGGCGGCGCCA......................... 1620.500.50-------------------------------------------------------0.50-------------
.................................................................................................................................................................................................................GCGTGGGGGCGGCGCCA........................ 1720.500.50---------------------------------------------------------0.50-----------
.............................................................................................................TCGGGCGCGGCCCCGGG............................................................................................................................ 1720.500.50---0.50-----------------------------------------------------------------
....................................................................................................................GCAGCATCGGGCGCGG...................................................................................................................... 1620.500.50-0.50-------------------------------------------------------------------
.............................................................................................................CGGGCGCGGCCCCGGG............................................................................................................................. 1630.330.33----0.33----------------------------------------------------------------
..............................................................TGACCTGTTTCGGGC............................................................................................................................................................................. 1530.330.33--------------------0.33------------------------------------------------
..............................................................................................................CGGGCGCGGCCCCGG............................................................................................................................. 1570.140.14-------------------------------------------------------------------0.14-
.............................................................................................................GGGCGCGGCCCCGGG.............................................................................................................................. 1590.110.11----0.11----------------------------------------------------------------
.............................................................................................................CCCGGGGCCGCGCCCTG............................................................................................................................ 170.110.00---0.11-----------------------------------------------------------------
.............................................................................................................CCCGGGGCCGCGCCCTGG........................................................................................................................... 180.110.00--------------------------------------------------------------------0.11
...................................................................................................................................................................................................................GCGTGGGGGCGGCGC........................ 1590.110.11------------------------0.11--------------------------------------------