uc001ste.2_intron_6_0_chr12_66563134

ACCGCCGCAGCCTGAATTTGGCATCTTGAAGTGAAAAGAAACGTCGTGGAAATGAGTCGGTTGATCACTGTGACTGACGTACACACGAGTGGAATCCACGGCCTGATGTTTTTGTTCTGTGGGGTTTCGCGTTACAGGCTTATATTTACCGTCCTGTGCTAGGCTGGAAGCTCCCTGACGGCACTATTTCCTCTCCGCAGGGCCCAGAATGCAACAGGTCTTTGAGGATTATTGAGGAAGTTGCTCAACA
........................................................................................................(((((....((.((((((.((...)).))))))))..)))))..(((.((((...)))).)))...................................................................................
.....................................................................................................102...............................................................168................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)

SRR033728(GSM497073)
MALT (MALT413). (B cell)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)

DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)

SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)

SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)

SRR015358(GSM380323)
Nàøve B Cell (Naive39). (B cell)

SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)

SRR553576(SRX182782)
source: Testis. (testes)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)

SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)

SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)

SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)

SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)

SRR189784

SRR040018(GSM532903)
G701N. (cervix)

SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)

SRR040010(GSM532895)
G529N. (cervix)

SRR040011(GSM532896)
G529T. (cervix)

SRR037937(GSM510475)
293cand2. (cell line)

SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)

SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

TAX577739(Rovira)
total RNA. (breast)

TAX577590(Rovira)
total RNA. (breast)

SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)

SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

SRR040024(GSM532909)
G613N. (cervix)

SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)

SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)

SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)

SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033731(GSM497076)
h929 Cell line (h929). (B cell)

SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)

SRR040027(GSM532912)
G220T. (cervix)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)

SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)

SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR029124(GSM416753)
HeLa. (hela)

SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

SRR040037(GSM532922)
G243T. (cervix)

SRR040028(GSM532913)
G026N. (cervix)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)

SRR040016(GSM532901)
G645N. (cervix)

SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)

SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)

SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)

SRR189782

TAX577740(Rovira)
total RNA. (breast)

SRR040023(GSM532908)
G575T. (cervix)

SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)

SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)

SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)

SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)

SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)

SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)

SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR040025(GSM532910)
G613T. (cervix)

SRR040022(GSM532907)
G575N. (cervix)

SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)

SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)

SRR038861(GSM458544)
MM466. (cell line)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

TAX577742(Rovira)
total RNA. (breast)

SRR040038(GSM532923)
G531N. (cervix)

DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)

TAX577579(Rovira)
total RNA. (breast)

SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)

SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)

SRR029132(GSM416761)
MB-MDA231. (cell line)

SRR037934(GSM510472)
293cand4_rep3. (cell line)

TAX577744(Rovira)
total RNA. (breast)

TAX577589(Rovira)
total RNA. (breast)

SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

SRR038862(GSM458545)
MM472. (cell line)

SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)

SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)

TAX577745(Rovira)
total RNA. (breast)

SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)

SRR037933(GSM510471)
293cand4_rep2. (cell line)

SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)

SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)

TAX577743(Rovira)
total RNA. (breast)

SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)

SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)

..................................................................................................................................................TACCGTCCTGTGCTAACT......................................................................................

11.00

0.00

7.00

2.00

1.00

..................................................................................................................................................TACCGTCCTGTGCTAACTG.....................................................................................

6.00

0.00

3.00

1.00

.............................................................................................................................................................................................................................TTGAGGATTATTGAGGA............

3.00

...................................................................................................................................................................CTGGAAGCTCCCTGACGGCACTA................................................................

2.00

...............................TGAAAAGAAACGTCGTGGAAATGAGT.................................................................................................................................................................................................

2.00

................................................................................................................................................................AGGCTGGAAGCTCCCTGACGGCA...................................................................

2.00

1.00

2.00

..................................................................................................................................................TACCGTCCTGTGCTACCTG.....................................................................................

2.00

0.00

2.00

................................................................................................................................................................AGGCTGGAAGCTCCCTGACGG.....................................................................

2.00

1.00

2.00

1.00

..................................................................................................................................................TACCGTCCTGTGCTACCT......................................................................................

2.00

0.00

1.00

..........................................................................................................TGTTTTTGTTCTGTGGCTCC............................................................................................................................

1.00

0.00

1.00

...........................................................................................................GTTTTTGTTCTGTGGGGTTTC..........................................................................................................................

1.00

....................................AGAAACGTCGTGGAAATGAGTCGGTT............................................................................................................................................................................................

1.00

................................................................................................................................................................AGGCTGGAAGCTCCCTGACGGC....................................................................

1.00

........................................................TCGGTTGATCACTGTGACTGACG...........................................................................................................................................................................

1.00

................................GAAAAGAAACGTCGTGG.........................................................................................................................................................................................................

1.00

............................AAGTGAAAAGAAACGTCGTGGAAATGA...................................................................................................................................................................................................

1.00

...............................................................................................................................................................TAGGCTGGAAGCTCCCTGACGGC....................................................................

1.00

..............................................................................................TCCACGGCCTGATGTTTTTGTTCT....................................................................................................................................

1.00

......................................AAACGTCGTGGAAATGAGTCGGTTGAT.........................................................................................................................................................................................

1.00

..................................................................................................................................................TACCGTCCTGTGCTAACCG.....................................................................................

1.00

0.00

1.00

...........................................TCGTGGAAATGAGTCGGT.............................................................................................................................................................................................

1.00

..............................................................................................................................................TATTTACCGTCCTGTGCTAG........................................................................................

1.00

...................................................................................CACGAGTGGAATCCACGGCCT..................................................................................................................................................

1.00

............................................................................................................................................................................CCCTGACGGCACTATTT.............................................................

1.00

...........................................................GTTGATCACTGTGACTGA.............................................................................................................................................................................

1.00

..................................................................................................................................................................GCTGGAAGCTCCCTGACGGCA...................................................................

1.00

..........................................GTCGTGGAAATGAGTCGGT.............................................................................................................................................................................................

1.00

..........................................................................................................TGTTTTTGTTCTGTGGGGTTTTGCG.......................................................................................................................

1.00

0.00

1.00

.......................................AACGTCGTGGAAATGAGTCGGTTGATCACT.....................................................................................................................................................................................

1.00

............................................................................................................................................................TGCTAGGCTGGAAGCTCCCTGACGGCAC..................................................................

1.00

.......................................AACGTCGTGGAAATGAGTCGGT.............................................................................................................................................................................................

1.00

....................................................................TGTGACTGACGTACACAC....................................................................................................................................................................

1.00

...................................................................................................................................................................CTGGAAGCTCCCTGACGGCACTATT..............................................................

1.00

...................................................................................................................................................ACCGTCCTGTGCTAGGCTG....................................................................................

1.00

................................................................TCACTGTGACTGACGTACA.......................................................................................................................................................................

1.00

..................................................................................................................................................TACCGTCCTGTGCTACCAC.....................................................................................

1.00

0.00

1.00

...........................................................................................................................................................GTGCTAGGCTGGAAGCTCCCTGACG......................................................................

1.00

...................................................................................................................................................................CTGGAAGCTCCCTGACGGCACTAT...............................................................

1.00

.......................................................................................................................................................................................................GGGCCCAGAATGCAACAGTTC..............................

1.00

0.00

1.00

.............................................GTGGAAATGAGTCGGTTGATC........................................................................................................................................................................................

1.00

................................................................................................................................................................AGGCTGGAAGCTCCCTGACGGCAC..................................................................

1.00

......................................................AGTCGGTTGATCACTGTGACTGTT............................................................................................................................................................................

1.00

0.00

1.00

.......................................................................................................................................................................................................GGGCCCAGAATGCAACAGGTC..............................

1.00

................................................................................................................................................................AGGCTGGAAGCTCCCTGAC.......................................................................

1.00

........................................................................................GTGGAATCCACGGCCTGAT...............................................................................................................................................

1.00

..................................................................................................................................................TACCGTCCTGTGCTATCTG.....................................................................................

1.00

0.00

1.00

.................................................................................................................................................TTACCGTCCTGTGCTCACT......................................................................................

1.00

0.00

1.00

.......................................AACGTCGTGGAAATGAGT.................................................................................................................................................................................................

1.00

...................................................................................................................................................................CTGGAAGCTCCCTGACG......................................................................

0.50

................................................................................................................................................................AGGCTGGAAGCTCCCTGA........................................................................

0.50

...................................................................................................................................................................CTGGAAGCTCCCTGACGG.....................................................................