ID: uc001sfl.2_intron_8_0_chr12_54677752_f
GENE: (9)
chr12:54677702-54678091+


(2)
AGO2.ip
(1)
B-CELL
(2)
BRAIN
(2)
BREAST
(17)
CELL-LINE
(4)
CERVIX
(4)
HEART
(5)
HELA
(2)
LIVER
(1)
OTHER
(26)
SKIN
(1)
UTERUS
(2)
XRN.ip

Sense strand
TGGCCCCTATGGCGGTGGAGGCCAATACTTTGCAAAACCACGAAACCAAGGTATGGTATCTATGTAATTTTGGATAATGTCAAAAGAGTGTCTGTAGCTACTGCTGGGAAGAAAGCCCTTTAACTGCTATGTCTGGGCAGCAAAACGTTTATAGTTTAGAACCTTCAGAAAGTGATAATTTGATCACAAATTAGAAAAATCATGGGACCTCTTTACCACCTCCCTTGTAGTAGGGCCATTTTTAAATGGCCAGACACTTGAATTTAACTTTTATTATCCCAAATATGAAAACATTACTGTTGGCACTTTGAAACTTTAAAAGAAAAATTGTACTTTTCAGGTGGCTATGGCGGTTCCAGCAGCAGCAGTAGCTATGGCAGTGGCAGAAGA
......................................................((((.(((((..(((((.(((...)))...)))))...))))).))))................................................................................................................................................................................................................................................................................................
..................................................51..................................................103.............................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189786SRR189784SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040042(GSM532927)
G428N. (cervix)
GSM359202(GSM359202)
hepg2_untreated_a. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787GSM532874(GSM532874)
G699T. (cervix)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359199(GSM359199)
hepg2_cip_tap_pasr_b. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
GSM359203(GSM359203)
hepg2_untreated_b. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359177(GSM359177)
hela_nucl_a. (hela)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343335SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR029129(GSM416758)
SW480. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
.............................................................................................................................................................................................................................................................................................TGAAAACATTACTGTTGGCACTTTGAAACTTTAAAAGAAAAATTGTACTTTTCAGA.................................................566.000.006.00---------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................ATCCCAAATATGAAAACATTACTGTTGGCACTTTGAAACTTTAAAAGAAAAATTGTACTTTTCAGA.................................................664.000.004.00---------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................GCTATGGCAGTGGCATC...174.000.00------4.00---------------------------------------------------------------
................................................................................CAAAAGAGTGTCTGTAGGG...................................................................................................................................................................................................................................................................................................194.000.00-------4.00--------------------------------------------------------------
..................................................GTATGGTATCTATGTAATTTTGGA............................................................................................................................................................................................................................................................................................................................2413.003.00---2.00-----------------------1.00------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................ATGGCGGTTCCAGCAGCAGCAGCAGC..................262.000.00-2.00--------------------------------------------------------------------
...................................................................................................................................................................................................................................................AAATGGCCAGACACTTGAA................................................................................................................................1912.002.00-----------2.00----------------------------------------------------------
...........................................................................................................................................................................................AAATTAGAAAAATCATGGGACCT....................................................................................................................................................................................2312.002.00---------2.00------------------------------------------------------------
..................................................GTATGGTATCTATGTAATTTTGGATAATGTCAAAAGAGTGTCTGTAGCTACTGCTGGGAAGAAAGCCCTTTAACTGC.......................................................................................................................................................................................................................................................................7712.002.00--------2.00-------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TGGCGGTTCCAGCAGCAGCAGTAGCC.................262.000.00-1.00--1.00-----------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................ATGGCAGTGGCAGAATTCA192.000.00---------------1.00------------------1.00-----------------------------------
...............................................................................................AGCTACTGCTGGGAAGAAAGCC.................................................................................................................................................................................................................................................................................2211.001.00--------------------------1.00-------------------------------------------
...............................................................................................................................................................................................................................................................................................AAAACATTACTGTTGGCACTTTGAAAC............................................................................2711.001.00-----------------------1.00----------------------------------------------
.....................................................................................................................................................................................................................................................................................CCCAAATATGAAAACATTACTGTTGGCACTTTGAAACTTTAAAAGAAAAATTGTACTTTTCA...................................................6211.001.001.00---------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TTAACTTTTATTATCCCAAATATGAAAACATTA..............................................................................................3311.001.00---------------------------------1.00------------------------------------
................................................................................................................................................................................................................................................................................................................................................................GTTCCAGCAGCAGCAGTAGCTACG..............241.000.00----1.00-----------------------------------------------------------------
.....................................CCACGAAACCAAGGTATGGTATCTAT.......................................................................................................................................................................................................................................................................................................................................2611.001.00-------------------------------------1.00--------------------------------
......................................................................................................................................................................................................................................................................................................TACTGTTGGCACTTTGAAACTT..........................................................................2211.001.00-----------------------------1.00----------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TGGCGGTTCCAGCAGCAGCCGGA....................231.000.00-------------------------1.00--------------------------------------------
.....................................................................................................................................................................................................................................................................................................TTACTGTTGGCACTTTGAAACTCTG........................................................................251.000.00--1.00-------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................AGCAGTAGCTATGGCAGA.........181.000.00-------------------------------1.00--------------------------------------
...............................................................................TCAAAAGAGTGTCTGTAGCTACTCTT.............................................................................................................................................................................................................................................................................................261.000.00--1.00-------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................CTATGGCAGTGGCAGAAT.181.000.00---1.00------------------------------------------------------------------
........................................CGAAACCAAGGTATGG..............................................................................................................................................................................................................................................................................................................................................1611.001.00----------1.00-----------------------------------------------------------
............................................................................................TGTAGCTACTGCTGGGAAGAAAGCC.................................................................................................................................................................................................................................................................................2511.001.00------------------------1.00---------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................GCAGTAGCTATGGCAGTGGCC.....211.000.00-------------1.00--------------------------------------------------------
.................................AAAACCACGAAACCAAA....................................................................................................................................................................................................................................................................................................................................................171.000.00------------1.00---------------------------------------------------------
...............................................................................TCAAAAGAGTGTCTGTAGCTACTCTG.............................................................................................................................................................................................................................................................................................261.000.00--1.00-------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................TGGCAGTGGCAGAAGGTTG191.000.00-----1.00----------------------------------------------------------------
..............................................................................................................................CTATGTCTGGGCAGCAAAACGTTTACAG............................................................................................................................................................................................................................................281.000.00------------------1.00---------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................GCAGTAGCTATGGCAGTTGCA.....211.000.00-------------1.00--------------------------------------------------------
................................................................................................GCTACTGCTGGGAAGAAAGCC.................................................................................................................................................................................................................................................................................2111.001.00---1.00------------------------------------------------------------------
................................................................................CAAAAGAGTGTCTGTAGCTACTGTG.............................................................................................................................................................................................................................................................................................251.000.00--1.00-------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................ATGGCGGTTCCAGCAGCAGCAGC.....................231.000.00-1.00--------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................CAAATATGAAAACATTACTGTTGGCACTTTGAAACTTTAAAAGAAAAATTGTACTTTTCAG..................................................6111.001.00--------1.00-------------------------------------------------------------
...............................................................................................................................................................................................................................................................................TATTATCCCAAATATGAAAACATT...............................................................................................2411.001.00---------------------1.00------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................CTTTTCAGGTGGCTATGG........................................1811.001.00--------------1.00-------------------------------------------------------
..............GTGGAGGCCAATACTTTTCA....................................................................................................................................................................................................................................................................................................................................................................201.000.00--------------------1.00-------------------------------------------------
................................................................................CAAAAGAGTGTCTGTAGCTACTCTG.............................................................................................................................................................................................................................................................................................251.000.00--1.00-------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TGGCGGTTCCAGCAGCAGCAGTAGCCAC...............281.000.00-1.00--------------------------------------------------------------------
................................................................................................................................ATGTCTGGGCAGCAAAACGTTTATAGTTTAGAAC....................................................................................................................................................................................................................................3411.001.00-----------------------------------1.00----------------------------------
..................................................GTATGGTATCTATGTAATTTTG..............................................................................................................................................................................................................................................................................................................................2211.001.00---1.00------------------------------------------------------------------
.............................................................................................................................................AAAACGTTTATAGTTTAGAACCTTCAGAA............................................................................................................................................................................................................................2911.001.00------------1.00---------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................GTAGCTATGGCAGTGGA......171.000.00------------------------------------1.00---------------------------------
..................................................................................................................................................................................................................................................................................................................................................AGGTGGCTATGGCGGTTCCAGCAGCAGCAGC.....................311.000.00-1.00--------------------------------------------------------------------
........................................................................GATAATGTCAAAAGAGTGTCTGTAGCTCTG................................................................................................................................................................................................................................................................................................301.000.00----------------------------1.00-----------------------------------------
...............................................................GTAATTTTGGATAATGTCAAAAGAGTGT...........................................................................................................................................................................................................................................................................................................2811.001.00--------------------------------1.00-------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................ATGGCGGTTCCAGCAGCAGCAGCAG...................251.000.00-1.00--------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGTAGCTACGG.............211.000.00----1.00-----------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGGCACTTTGAAACTTTAAAAGAAAAAT..............................................................2811.001.00----------------------1.00-----------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................ATGGCAGTGGCAGAAAAAT191.000.00-----------------1.00----------------------------------------------------
...............................................................................................................................................................................................................................................................................................................CACTTTGAAACTTTAAAAGAAAAATTGTACTTTTCA...................................................3611.001.00------------------------------1.00---------------------------------------
....................................................................................................................................................................................................................................................................................................................................................GTGGCTATGGCGGTTCCAGCAGCAGGAGG.....................291.000.00--1.00-------------------------------------------------------------------
.........................................................................................................................................CAGCAAAACGTTTATTCGT..........................................................................................................................................................................................................................................191.000.00-----1.00----------------------------------------------------------------
.......................................................................................GTGTCTGTAGCTACTGCTGGG..........................................................................................................................................................................................................................................................................................2111.001.00-------------------1.00--------------------------------------------------
.....................................................................TTGGATAATGTCAAAAGAGTGTCTGTAGCTACTG...............................................................................................................................................................................................................................................................................................3411.001.00----------1.00-----------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................CGGTTCCAGCAGCAGCAA......................181.000.00----------------1.00-----------------------------------------------------
...................................................................................................................................TCTGGGCAGCAAAACGT..................................................................................................................................................................................................................................................1711.001.00--------------1.00-------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................ATGGCAGTGGCAGAAGTTT191.000.00---1.00------------------------------------------------------------------
...........................................................................................................................................................TTAGAACCTTCAGAAAG..........................................................................................................................................................................................................................1720.500.50------------------------------------------0.50---------------------------
.....................................................................................................................................................................................................................................................................................................TTACTGTTGGCACTTT.................................................................................1620.500.50---------------------------------------0.50------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TGGCTATGGCGGTTCCAGCAGCAGCAG......................2750.400.40-0.20-----------------------------------------------------0.20--------------
................GGAGGCCAATACTTTGCAAAACCACGAAACC.......................................................................................................................................................................................................................................................................................................................................................3130.330.33----------------0.33-----------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TGGCGGTTCCAGCAGCAGCAGCAGC..................2560.330.17-0.17----------------0.17---------------------------------------------------
................................CAAAACCACGAAACCAAG....................................................................................................................................................................................................................................................................................................................................................1860.330.33-----------------------------------------------------------0.170.17---------
.....................CCAATACTTTGCAAAACCACGAAACC.......................................................................................................................................................................................................................................................................................................................................................2630.330.33--------------------------------------0.33-------------------------------
..................AGGCCAATACTTTGCAAAACCACGAAACC.......................................................................................................................................................................................................................................................................................................................................................2930.330.33---------------------------------------------0.33------------------------
...................................................................................................................................................................................................................................................................................................................................................................CCAGCAGCAGCAGTAGCTATGGCAGTGGCAG....3170.290.29-----------------------------------------------0.29----------------------
...................................................................................................................................................................................................................................................................................................................................................................CCAGCAGCAGCAGTAGCTATGGCAGTGGCAGA...3270.290.29---------------0.14--------------------------------------------------0.14---
.................................................................................................................................................................................................................................................................................................................................................................TTCCAGCAGCAGCAGTAGCTATGGCAGTGGCA.....3270.290.29----0.29-----------------------------------------------------------------
........................ATACTTTGCAAAACCACGAA..........................................................................................................................................................................................................................................................................................................................................................2040.250.25----------------------------------------0.25-----------------------------
...............TGGAGGCCAATACTTTGCAAAACCACGAAAC........................................................................................................................................................................................................................................................................................................................................................3140.250.25-----0.25----------------------------------------------------------------
........................ATACTTTGCAAAACCACG............................................................................................................................................................................................................................................................................................................................................................1840.250.25--------------------------------------------------0.25-------------------
.....................CCAATACTTTGCAAAACCACGAA..........................................................................................................................................................................................................................................................................................................................................................2340.250.25--------------------------------------------0.25-------------------------
...........................CTTTGCAAAACCACGAAACCAAGGT..................................................................................................................................................................................................................................................................................................................................................2540.250.25-----------------------------------------0.25----------------------------
.....................CCAATACTTTGCAAAACCACG............................................................................................................................................................................................................................................................................................................................................................2140.250.25-------------------------------------------------0.25--------------------
................GGAGGCCAATACTTTGCAAAACCACG............................................................................................................................................................................................................................................................................................................................................................2640.250.25------------------------------------------------0.25---------------------
...................................................................................................................................................................................................................................................................................................................TTGAAACTTTAAAAGAA..................................................................1750.200.20------------------------------------------------------0.20---------------
..........................................................................................................................................................................................................................................................................................................................................................ATGGCGGTTCCAGCAGCAGCAGTAGCT.................2750.200.20-0.20--------------------------------------------------------------------
...........................CTTTGCAAAACCACGAAACC.......................................................................................................................................................................................................................................................................................................................................................2050.200.20----------------------------------------------------0.20-----------------
.....................................................................................................................................................................................................................................................................................................................................................TGGCTATGGCGGTTCCAGCAGCAGCAGC.....................2850.200.40-0.20--------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................CGGTTCCAGCAGCAGCAGTAGCTAC...............2550.200.20----0.20-----------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................GTGGCTATGGCGGTTCCAGCAGCAGC........................2650.200.20----0.20-----------------------------------------------------------------
.........TGGCGGTGGAGGCCAATACTTTGCA....................................................................................................................................................................................................................................................................................................................................................................2550.200.20---------------------------------------------------------0.20------------
..........................ACTTTGCAAAACCACGAAACCAAG....................................................................................................................................................................................................................................................................................................................................................2450.200.20----------------------------------------0.20-----------------------------
.............................TTGCAAAACCACGAAACCA......................................................................................................................................................................................................................................................................................................................................................1950.200.20----------------------------------------------------------0.20-----------
..............................................................................................................................................................................................................................................................................................................................................................CGGTTCCAGCAGCAGCAGTAGCTA................2450.200.20---------------------------------------------------0.20------------------
........................................................................................................................................................................................................................................................................................................................................................CTATGGCGGTTCCAGCAGCAGC........................2250.200.20-----------------------------------------------------0.20----------------
............CGGTGGAGGCCAATACTTTGCAA...................................................................................................................................................................................................................................................................................................................................................................2350.200.20---------------0.20------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TGGCGGTTCCAGCAGCAGCAGTAGCTAT...............2850.200.20----0.20-----------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TGGCGGTTCCAGCAGCAGCAGTAGCTACGG.............3050.200.20----0.20-----------------------------------------------------------------
............CGGTGGAGGCCAATACTTTGCA....................................................................................................................................................................................................................................................................................................................................................................2250.200.20-----------------0.20----------------------------------------------------
...........GCGGTGGAGGCCAATACTTTGCAAAACC...............................................................................................................................................................................................................................................................................................................................................................2850.200.20-----------------------------------------0.20----------------------------
........................................................................................................................................................................................................................................................................................................................................................CTATGGCGGTTCCAGCAGCAGCAG......................2450.200.20--------------------------------------------------------0.20-------------
...........................................................................................................................................................................................................................................................................................................................................................TGGCGGTTCCAGCAGCAGCAGTAGCTA................2750.200.20----0.20-----------------------------------------------------------------
...............TGGAGGCCAATACTTTGCAAAACC...............................................................................................................................................................................................................................................................................................................................................................2460.170.17----0.17-----------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TGGCGGTTCCAGCAGCAGCAG......................2160.170.17-0.17--------------------------------------------------------------------
..................AGGCCAATACTTTGCAAAA.................................................................................................................................................................................................................................................................................................................................................................1960.170.17--------------------------------------------------------------0.17-------
..............................................................................................................................................................................................................................................................................................................................................................CGGTTCCAGCAGCAGCAG......................1860.170.17-------------------------------------------------------------0.17--------
..................AGGCCAATACTTTGCAAAACCAC.............................................................................................................................................................................................................................................................................................................................................................2360.170.17-----------0.17----------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................CGGTTCCAGCAGCAGCAGT.....................1960.170.17----------0.17-----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................GCGGTTCCAGCAGCAGCAG......................1960.170.17----------------------------------------0.17-----------------------------
.........................TACTTTGCAAAACCACGAA..........................................................................................................................................................................................................................................................................................................................................................1960.170.17---------------------------------------------------------------0.17------
...........................................................................................................................................................................................................................................................................................................................................................TGGCGGTTCCAGCAGC...........................1660.170.17----------------------------------------------0.17-----------------------
.............................TTGCAAAACCACGAAA.........................................................................................................................................................................................................................................................................................................................................................1670.140.14-----------------------------------------0.14----------------------------
........ATGGCGGTGGAGGCCAATAC..........................................................................................................................................................................................................................................................................................................................................................................2070.140.14-----------------------------------------------------------------0.14----
....................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGTAGCTATGGCA...........2370.140.14---------------------------------------0.14------------------------------
...................................................................................................................................................................................................................................................................................................................................................................CCAGCAGCAGCAGTAGCTATGGC............2370.140.14---------------0.14------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................CCAGCAGCAGCAGTAGCTATGGCAG..........2570.140.14----------------------------------------------------------------0.14-----
...................................................................................................................................................................................................................................................................................................................................................................CCAGCAGCAGCAGTAGCTATGGCAGTGGCA.....3070.140.14-------------------------------------------------------------------0.14--
................................................................................................................................................................................................................................................................................................................................................................GTTCCAGCAGCAGCAGTA....................1870.140.14--0.14-------------------------------------------------------------------
....CCCTATGGCGGTGGAGGC................................................................................................................................................................................................................................................................................................................................................................................1880.120.12------------0.12---------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGTAGCTATGG.............2180.120.12----------------------------------------------0.12-----------------------
...CCCCTATGGCGGTGGAGGC................................................................................................................................................................................................................................................................................................................................................................................1980.120.12-------------------0.12--------------------------------------------------
....CCCTATGGCGGTGGAG..................................................................................................................................................................................................................................................................................................................................................................................1680.120.12--------------------------------------------------------------------0.12-
.GGCCCCTATGGCGGT......................................................................................................................................................................................................................................................................................................................................................................................1580.120.12--------------------------------------------0.12-------------------------
.......................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGTAGCTATGG.............1890.110.11---------------------------------------------------------------------0.11

Antisense strand
TGGCCCCTATGGCGGTGGAGGCCAATACTTTGCAAAACCACGAAACCAAGGTATGGTATCTATGTAATTTTGGATAATGTCAAAAGAGTGTCTGTAGCTACTGCTGGGAAGAAAGCCCTTTAACTGCTATGTCTGGGCAGCAAAACGTTTATAGTTTAGAACCTTCAGAAAGTGATAATTTGATCACAAATTAGAAAAATCATGGGACCTCTTTACCACCTCCCTTGTAGTAGGGCCATTTTTAAATGGCCAGACACTTGAATTTAACTTTTATTATCCCAAATATGAAAACATTACTGTTGGCACTTTGAAACTTTAAAAGAAAAATTGTACTTTTCAGGTGGCTATGGCGGTTCCAGCAGCAGCAGTAGCTATGGCAGTGGCAGAAGA
......................................................((((.(((((..(((((.(((...)))...)))))...))))).))))................................................................................................................................................................................................................................................................................................
..................................................51..................................................103.............................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189786SRR189784SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040042(GSM532927)
G428N. (cervix)
GSM359202(GSM359202)
hepg2_untreated_a. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787GSM532874(GSM532874)
G699T. (cervix)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359199(GSM359199)
hepg2_cip_tap_pasr_b. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
GSM359203(GSM359203)
hepg2_untreated_b. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359177(GSM359177)
hela_nucl_a. (hela)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343335SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR029129(GSM416758)
SW480. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
.......................................................................................................................................................................................................................................................................................................ACTGTTGGCACTTTGAGCAG........................................................................... 201.000.00-----1.00----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................ACTGTTGGCACTTTGCCAC............................................................................ 191.000.00-----1.00----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................ACTGTTGGCACTTTGTC.............................................................................. 171.000.00----1.00-----------------------------------------------------------------
.................................................................................CCAGCAGTAGCTACAGACACTCTTTT........................................................................................................................................................................................................................................................................................... 2611.001.00---------1.00------------------------------------------------------------
..................................................................................................................TAGCAGTTAAAGGGC..................................................................................................................................................................................................................................................................... 1520.500.50--------------------------------------0.50-------------------------------
.........................................................................................................................................................................................................................................................................................................................TACAATTTTTCTTTTAAAG.......................................................... 1920.500.50-------------------------------------------0.50--------------------------