ID: uc001qvx.3_intron_1_0_chr12_9571526_r
GENE: (4)
chr12:9571476-9571757-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(1)
AGO3.ip 		(3)
B-CELL 		(6)
BREAST 		(20)
CELL-LINE 		(1)
HEART 		(2)
HELA 		(1)
LIVER 		(4)
OTHER 		(28)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GAAGGCTCTGGTGGAGAACCTGTGCATGAAGGCCGTCAACCAGTCCATAGGTGAGCCTGGCTGCCTCCAGCTGGGTGGACAGATGGGAGCTGGAGAAGGGGAGAACAGGAAAGAGGGGTTGCCTGCCCTGTTTCCTATATAAGTCTGAGGAAGGTGAGGGGGGGTCGCCATGGGAATGTGCTGTAGGGGGAGGCAGGTGTTGCTCGGAGCGCCAGCCTCTGTTCCTATGCAGGCAGGGCCATCAGGCACCAGAAGGATTTTGCCAGCATAGTGCTCCTGGAC
......................................................................................................................................................................((.((((((((...........((((((.((((((......)))))).))))))))))))))))....................................................
......................................................................................................................................................................167..............................................................232................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189783SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR037931(GSM510469)
293GFP. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
...................................................................................................................................................................................................................CCAGCCTCTGTTCCTATGCAGT.................................................22329.673.009.00--2.00----3.00--2.00---1.002.00-2.00-----1.001.00----------1.00--1.00---1.00-1.00-1.001.00--0.33-----------0.33--
...................................................................................................................................................................................................................CCAGCCTCTGTTCCTATGCAGA.................................................22314.333.004.0010.00-------------------------------------------------0.33--------------
...........................................................................................................................................................................GGGAATGTGCTGTAGGCTTT...........................................................................................207.000.00---------1.00-------1.00-1.00----------1.001.00------1.00-------1.00-------------------
............................................................................................................................................................................GGAATGTGCTGTAGGCTT............................................................................................186.000.00------1.001.00------1.00--1.00-1.001.00---------------------------------------------
............................................................................................................................................................................GGAATGTGCTGTAGGCTTT...........................................................................................195.000.00-------2.00--1.00---1.00-----------1.00---------------------------------------
...........................................................................................................................................................................GGGAATGTGCTGTAGGCTT............................................................................................193.000.00------1.00--1.00------------------------1.00-------------------------------
...................................................................................................................................................................................................................CCAGCCTCTGTTCCTATGTAG..................................................2143.000.50----3.00-------------------------------------------------------------
...................................................................................................................................................................................................................CCAGCCTCTGTTCCTATGCAG..................................................2133.003.000.67--------------------1.330.33-----------------------------0.67-------------
...................................................................................................................................................................................................................CCAGCCTCTGTTCCTATGCAGAT................................................2332.003.00-------------2.00----------------------------------------------------
..........................................................................................................................................................................TGGGAATGTGCTGTAGGCTTT...........................................................................................212.000.00------1.00--------------------------1.00--------------------------------
...................................................................................................................................................................................................................CCAGCCTCTGTTCCTATGCAGTTT...............................................2432.003.002.00-----------------------------------------------------------------
........................................................................................................................................ATATAAGTCTGAGGAAGGTGAG............................................................................................................................2211.001.00---1.00--------------------------------------------------------------
.....................................................................................................................................CCTATATAAGTCTGAGGAAGGTGAG............................................................................................................................2511.001.00---1.00--------------------------------------------------------------
..........................................................................................................................................................................TGGGAATGTGCTGTAGGC..............................................................................................181.000.00-----------------------------------------1.00------------------------
.........................................................................................................................................TATAAGTCTGAGGAAGGTGAG............................................................................................................................2111.001.00-----------------------1.00------------------------------------------
........TGGTGGAGAACCTGTGCATGAAGGCC........................................................................................................................................................................................................................................................2631.001.00--1.00---------------------------------------------------------------
........................................................................................................................................ATATAAGTCTGAGGAAGGTGA.............................................................................................................................2111.001.00---1.00--------------------------------------------------------------
.......................................................................................................................................................................................................................................................ACCAGAAGGATTTTGCCAGCATAGTGCTCCAA...321.000.00--1.00---------------------------------------------------------------
.................................................................................................................................................................................GTGCTGTAGGGGGAGGCAGGTGTTG................................................................................2511.001.00------------------------------------------1.00-----------------------
...........................................................................................................................................................................GGGAATGTGCTGTAGGCTA............................................................................................191.000.00-------------------------------------1.00----------------------------
..........................................................................................................................................................................TGGGAATGTGCTGTAGGCTT............................................................................................201.000.00-----------------------------1.00------------------------------------
..........................TGAAGGCCGTCAACCAGTCCATAGGC......................................................................................................................................................................................................................................261.000.00--1.00---------------------------------------------------------------
................................................................................................................................................................................TGTGCTGTAGGGGGAGGCAGGT....................................................................................2211.001.00----------------------------1.00-------------------------------------
.........................................................................................................................................................................................GGGGGAGGCAGGTGTTCTTT.............................................................................201.000.00--------------------------------------------1.00---------------------
...........................................................................................................................................................................GGGAATGTGCTGTAGGCTTA...........................................................................................201.000.00-----------------------------------1.00------------------------------
.......................................................................................................................................TATATAAGTCTGAGGAAG.................................................................................................................................1840.750.75-------------------------------------------------0.75----------------
...........................GAAGGCCGTCAACCAGTCCATAG........................................................................................................................................................................................................................................2330.670.67-----------------------------------------------------0.67------------
....................................................................................................................................................................TCGCCATGGGAATGTGCTGTAGG...............................................................................................2320.500.500.50-----------------------------------------------------------------
...................................................................................................................................................................................................................CCAGCCTCTGTTCCTATG.....................................................1840.500.50------------------------------------------------------0.50-----------
..............................................ATAGGTGAGCCTGGCTGCCT........................................................................................................................................................................................................................2030.330.33--------------------------------------------------------0.33---------
..........................................GTCCATAGGTGAGCCT................................................................................................................................................................................................................................1630.330.33---------------------------------------------------------0.33--------
.................................................................................................................................................................................................................................................TCAGGCACCAGAAGGATTTT.....................2030.330.33------------------------------------------------------------0.33-----
........TGGTGGAGAACCTGTGCATGAAGGCCGT......................................................................................................................................................................................................................................................2830.330.33--0.33---------------------------------------------------------------
........TGGTGGAGAACCTGTGCATGAAGGCCGTC.....................................................................................................................................................................................................................................................2930.330.33--0.33---------------------------------------------------------------
...................................................................................................................................................................................................................CCAGCCTCTGTTCCTATGCA...................................................2030.330.33----------------------------------------------------------0.33-------
.....................................................................................................................................CCTATATAAGTCTGAGGAA..................................................................................................................................1930.330.33----------------------------------------------------------------0.33-
...............GAACCTGTGCATGAAGGCCGTC.....................................................................................................................................................................................................................................................2230.330.33-----------------------0.33------------------------------------------
...........TGGAGAACCTGTGCATGAAGGCCGTC.....................................................................................................................................................................................................................................................2630.330.33--0.33---------------------------------------------------------------
........................................................................................................................................................................................................................................................CCAGAAGGATTTTGCCA.................1730.330.33--------------------0.33---------------------------------------------
......TCTGGTGGAGAACCTGTGCATGAAGGCCGTC.....................................................................................................................................................................................................................................................3130.330.33--0.33---------------------------------------------------------------
......................................................................................GAGCTGGAGAAGGGGAGA..................................................................................................................................................................................1850.200.20-----------------------------------------------------------------0.20

Antisense strand
GAAGGCTCTGGTGGAGAACCTGTGCATGAAGGCCGTCAACCAGTCCATAGGTGAGCCTGGCTGCCTCCAGCTGGGTGGACAGATGGGAGCTGGAGAAGGGGAGAACAGGAAAGAGGGGTTGCCTGCCCTGTTTCCTATATAAGTCTGAGGAAGGTGAGGGGGGGTCGCCATGGGAATGTGCTGTAGGGGGAGGCAGGTGTTGCTCGGAGCGCCAGCCTCTGTTCCTATGCAGGCAGGGCCATCAGGCACCAGAAGGATTTTGCCAGCATAGTGCTCCTGGAC
......................................................................................................................................................................((.((((((((...........((((((.((((((......)))))).))))))))))))))))....................................................
......................................................................................................................................................................167..............................................................232................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189783SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR037931(GSM510469)
293GFP. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................................................................................................................................AGGAACAGAGGCTGGCGC........................................................ 1824.504.50-----3.00------1.00------------------------------------------0.50----------
........................................................................................................................................................GGTGAGGGGGGGTCGCCAC............................................................................................................... 191.000.00----------------------------------------1.00-------------------------
...............................................................................................................................................................GGGGGTCGCCATGGGAATGTGCTGTAGGGGGA........................................................................................... 321.000.00----------------------1.00-------------------------------------------
........................................................................................................................................................................................AGGGGGAGGCAGGTGCGCC............................................................................... 191.000.00--------------------------------1.00---------------------------------
.......................................................................................................................................................................CCATGGGAATGTGCTAA.................................................................................................. 171.000.00---------------1.00--------------------------------------------------
.................................................................................................................................................................................................................CGCCAGCCTCTGTTCCTG....................................................... 181.000.00------------1.00-----------------------------------------------------
....................................................................................GGGAGCTGGAGAAGGGTT.................................................................................................................................................................................... 181.000.00----------1.00-------------------------------------------------------
.................................................................................................................................................................................GTGCTGTAGGGGGAGGTTAG..................................................................................... 201.000.00---------------------------1.00--------------------------------------
..........................CCTATGGACTGGTTGACGGCCTTCA....................................................................................................................................................................................................................................... 2530.670.67--------------------------------------------------0.67---------------
...............................TATGGACTGGTTGACGGC......................................................................................................................................................................................................................................... 1830.670.67-----------------------------------------------------------0.33--0.33---
................................ATGGACTGGTTGACGG.......................................................................................................................................................................................................................................... 1630.330.33--0.33---------------------------------------------------------------
................TGGACTGGTTGACGGCCTTCATGCACAGGTT........................................................................................................................................................................................................................................... 3130.330.33--0.33---------------------------------------------------------------
.....................TGGACTGGTTGACGGCCTTCATGCAC........................................................................................................................................................................................................................................... 2630.330.33--0.33---------------------------------------------------------------
.......................CACCTATGGACTGGTTGACGGCCTTCATGC..................................................................................................................................................................................................................................... 3030.330.33--0.33---------------------------------------------------------------
...............................CACCTATGGACTGGTTGACGGC..................................................................................................................................................................................................................................... 2230.330.33-------------------------------------------------------------0.33----