ID: uc001mgx.2_intron_0_0_chr11_8932771_f
GENE: (1)
chr11:8932721-8933040+


(2)
AGO2.ip 		(1)
AGO3.ip 		(11)
B-CELL 		(2)
BRAIN 		(13)
BREAST 		(32)
CELL-LINE 		(10)
CERVIX 		(4)
HEART 		(2)
HELA 		(1)
KIDNEY 		(4)
LIVER 		(2)
OTHER 		(17)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
CCCTCTTCCTAGAATAGCGTTGCGCGCATGCGCCTTGACGAGTGAGCCGGGTGAGGGGGCTCCCTAAGTAGCGGAAGGGGTAGATGAAAATGGAAGGGGCGGGCGCGCTAGGCCTAGTCCTGGCTGGGCTCCCGCTGGAGTGTGCGTTGGGGGCGGACCAGGAGCGGTGGTCTCCAGGGAGGTCGAGGCTGGGGCTCCCACCCGGATTTGGAGCAGGGTCGCCGCGGCCCAGCTGACCCGCCGGCGTTTGTACGTTGTGTGCCCACTCAGGGAGCCATGGACAACTGTTTGGCGGCCGCAGCGCTGAATGGGGTGGACCG
.............................................................................((((..((....))......((((....))))..))))..((((((((..((((((((........))...)))))))).)))))).............................................................................................................................................................
..........................................................................75.............................................................................................170....................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040040(GSM532925)
G612N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359187(GSM359187)
HepG2_2pM_1. (cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM532874(GSM532874)
G699T. (cervix)		SRR040036(GSM532921)
G243N. (cervix)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR038860(GSM458543)
MM426. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR040012(GSM532897)
G648N. (cervix)		SRR189786SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR029125(GSM416754)
U2OS. (cell line)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR029129(GSM416758)
SW480. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		GSM956925PAZD5SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................GTAGATGAAAATGGAAGGGG.............................................................................................................................................................................................................................20114.0014.0011.00-2.00------------1.00---------------------------------------------------------------------------------------
......................................................................GCGGAAGGGGTAGATGAA........................................................................................................................................................................................................................................1819.009.00-------2.00---1.00-----1.00-------2.00------------------------------1.00--------------1.00--1.00----------------------------
....................................................................................................................................................................................................................................................................................ATGGACAACTGTTTGGCGGC........................2016.006.00-6.00-----------------------------------------------------------------------------------------------------
.....................................................................AGCGGAAGGGGTAGATGA.........................................................................................................................................................................................................................................1816.006.00------1.00-------------------1.00---------------------1.00--1.00--1.00--------------------1.00---------------------------
.....................................................................................................................................................................................................................................................................................TGGACAACTGTTTGGCGGCCGCAGC..................2515.005.00-----5.00-------------------------------------------------------------------------------------------------
................................................................................................................................................CGTTGGGGGCGGACCAGGAGCG..........................................................................................................................................................2214.004.00----4.00--------------------------------------------------------------------------------------------------
.............................................................................GGGTAGATGAAAATGGAAGG...............................................................................................................................................................................................................................2014.004.003.00-----------------------------------------------------------1.00------------------------------------------
.................................................................................................................CTAGTCCTGGCTGGGCTCCC...........................................................................................................................................................................................2013.003.00----3.00--------------------------------------------------------------------------------------------------
..........................................TGAGCCGGGTGAGGGGGC....................................................................................................................................................................................................................................................................1813.003.00-3.00-----------------------------------------------------------------------------------------------------
...............................................................................................................................................GCGTTGGGGGCGGACCAGGAG............................................................................................................................................................2113.003.00--3.00----------------------------------------------------------------------------------------------------
........................................................................GGAAGGGGTAGATGAAAATG....................................................................................................................................................................................................................................2013.003.00------1.00-----1.00---------------------1.00--------------------------------------------------------------------
....................................................................TAGCGGAAGGGGTAGATGAA........................................................................................................................................................................................................................................2013.003.00--------------------1.00----------------1.00-------------------------1.00---------------------------------------
..........................................................................AAGGGGTAGATGAAAATG....................................................................................................................................................................................................................................1822.002.000.50-------------0.50---------------------------------------------------------------------1.00------------------
............................TGCGCCTTGACGAGTGAGC.................................................................................................................................................................................................................................................................................1912.002.00---------2.00---------------------------------------------------------------------------------------------
....................................................................TAGCGGAAGGGGTAGATG..........................................................................................................................................................................................................................................1812.002.00-------2.00-----------------------------------------------------------------------------------------------
....................................................................TAGCGGAAGGGGTAGATGAAAACGG...................................................................................................................................................................................................................................252.000.00-------------2.00-----------------------------------------------------------------------------------------
.....................................................AGGGGGCTCCCTAAGTAGCGGAAGGGGTAG.............................................................................................................................................................................................................................................3012.002.00---------------1.00------------------------------------------------------------------------1.00--------------
...........................................................................................................................................................................................................GGATTTGGAGCAGGGAGA...................................................................................................182.000.00-------------------1.00----1.00------------------------------------------------------------------------------
.............................GCGCCTTGACGAGTGAGCCGGG.............................................................................................................................................................................................................................................................................2212.002.002.00------------------------------------------------------------------------------------------------------
..................................................................AGTAGCGGAAGGGGTAG.............................................................................................................................................................................................................................................1712.002.00---------------------------1.00----1.00----------------------------------------------------------------------
.......................................................................................................CGCGCTAGGCCTAGTCC........................................................................................................................................................................................................1712.002.00--------2.00----------------------------------------------------------------------------------------------
....................................................................TAGCGGAAGGGGTAGATGA.........................................................................................................................................................................................................................................1912.002.00------1.00-----------------------------------1.00------------------------------------------------------------
...............................................................................GTAGATGAAAATGGAAGG...............................................................................................................................................................................................................................1821.501.500.501.00-----------------------------------------------------------------------------------------------------
.............................................................................................................AGGCCTAGTCCTGGCTGGGC...............................................................................................................................................................................................2011.001.00------------------------------------------------------------------------------------------1.00------------
..........................................................................................................................................................................................................CGGATTTGGAGCAGGGTCGCC.................................................................................................2111.001.00-------------------------------------------------------1.00-----------------------------------------------
...................................................................................ATGAAAATGGAAGGGGCGGG.........................................................................................................................................................................................................................2011.001.00--1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................GGGCTCCCGCTGGAGTGTGCGTTGG..........................................................................................................................................................................2511.001.00------------------1.00------------------------------------------------------------------------------------
...................................................................GTAGCGGAAGGGGTAGA............................................................................................................................................................................................................................................1711.001.00---------------------1.00---------------------------------------------------------------------------------
......................................................................GCGGAAGGGGTAGATGAAAATGGAA.................................................................................................................................................................................................................................2511.001.00-------------------------------------------------1.00-----------------------------------------------------
..........................................................................AAGGGGTAGATGAAAATGGAAGGAA.............................................................................................................................................................................................................................251.000.00------1.00------------------------------------------------------------------------------------------------
.......................................................................................................................CTGGCTGGGCTCCCGCTGGAG....................................................................................................................................................................................2111.001.00--1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................GCCGCAGCGCTGAATGGGG.......1911.001.00-1.00-----------------------------------------------------------------------------------------------------
..................................................................AGTAGCGGAAGGGGTAGA............................................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------------------------------1.00---------------
..............................................................................................................................................................................CAGGGAGGTCGAGGCTTTT...............................................................................................................................191.000.00--1.00----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................ACCCGGATTTGGAGCAGGGTCGCCGC...............................................................................................2611.001.00---------------------------------------------------------------------1.00---------------------------------
....................................................................................................................................CGCTGGAGTGTGCGTTGGGGGC......................................................................................................................................................................2211.001.00------------------1.00------------------------------------------------------------------------------------
.......................................................................................................CGCGCTAGGCCTAGTC.........................................................................................................................................................................................................1611.001.00--------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................ATGGACAACTGTTTGGCGG.........................1911.001.00--------------------------------------------------------------------------------1.00----------------------
...........................................................CTCCCTAAGTAGCGGAAGGGGTAG.............................................................................................................................................................................................................................................2411.001.00------------------------------1.00------------------------------------------------------------------------
........................................................GGGCTCCCTAAGTAGCGGAAGG..................................................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------1.00--------------------------------------
.........................GCATGCGCCTTGACGAGTGAGCCGG..............................................................................................................................................................................................................................................................................2511.001.00--------------------------------------------------1.00----------------------------------------------------
.....................................................................................................................................................................................................................................................................CCCACTCAGGGAGCCATGGACAACTGTTTGGCGGC........................3511.001.00-----------------------1.00-------------------------------------------------------------------------------
......................................................................GCGGAAGGGGTAGATGAAATT.....................................................................................................................................................................................................................................2111.001.00--------------------------------------------------------------1.00----------------------------------------
...............................................................................GTAGATGAAAATGGAAGGGGCGGGCGC......................................................................................................................................................................................................................2711.001.00----------------------------------------------1.00--------------------------------------------------------
......................................................................GCGGAAGGGGTAGATGAAAATGGAAG................................................................................................................................................................................................................................2611.001.00--------------1.00----------------------------------------------------------------------------------------
....................................................................................TGAAAATGGAAGGGGCGG..........................................................................................................................................................................................................................1811.001.00-------------------------------------------------------------------------1.00-----------------------------
..............................................................................GGTAGATGAAAATGGAAGGG..............................................................................................................................................................................................................................2011.001.00---------------------------------1.00---------------------------------------------------------------------
...................................................................................................................................................................................................................AGCAGGGTCGCCGCGGGCTA.........................................................................................201.000.00-----------------1.00-------------------------------------------------------------------------------------
..................................................................................................................................CCCGCTGGAGTGTGCGTTGGGG........................................................................................................................................................................2211.001.001.00------------------------------------------------------------------------------------------------------
...............................GCCTTGACGAGTGAGCCGGG.............................................................................................................................................................................................................................................................................2011.001.00------------------------1.00------------------------------------------------------------------------------
.............................................................................................................AGGCCTAGTCCTGGCTGGG................................................................................................................................................................................................1911.001.00-----------------------------------------------------1.00-------------------------------------------------
.................................................................AAGTAGCGGAAGGGGTAGT............................................................................................................................................................................................................................................191.000.00----------------------------------------------------1.00--------------------------------------------------
......................................................................GCGGAAGGGGTAGATGAAAAT.....................................................................................................................................................................................................................................2111.001.00--------------------------------------1.00----------------------------------------------------------------
..................................................................................................................................................................................GAGGTCGAGGCTGGGGCTC...........................................................................................................................1911.001.00---------------------------------------------------------1.00---------------------------------------------
..................................................................AGTAGCGGAAGGGGTAGAT...........................................................................................................................................................................................................................................1911.001.00------------1.00------------------------------------------------------------------------------------------
.........................................................................................ATGGAAGGGGCGGGCGCG.....................................................................................................................................................................................................................1811.001.00--1.00----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................GGATTTGGAGCAGGGAGAT..................................................................................................191.000.00-----------------------------------------------------------1.00-------------------------------------------
.................................................................AAGTAGCGGAAGGGGTAGAAAAT........................................................................................................................................................................................................................................231.000.00----------------------------------------------------------1.00--------------------------------------------
............................................................................................GAAGGGGCGGGCGCGCTAGG................................................................................................................................................................................................................2011.001.00--1.00----------------------------------------------------------------------------------------------------
........................................................................................................................................................GCGGACCAGGAGCGGGC.......................................................................................................................................................171.000.00-------------1.00-----------------------------------------------------------------------------------------
..........................................TGAGCCGGGTGAGGGTGT....................................................................................................................................................................................................................................................................181.000.00-1.00-----------------------------------------------------------------------------------------------------
................................................................................TAGATGAAAATGGAAGGGGC............................................................................................................................................................................................................................2011.001.00----------------------------------------------------------------------------1.00--------------------------
.......................................................................................................................................TGGAGTGTGCGTTGGGGGCGGACCA................................................................................................................................................................2511.001.00----------1.00--------------------------------------------------------------------------------------------
.......................................................................CGGAAGGGGTAGATGAAAGTGG...................................................................................................................................................................................................................................2211.001.00---------------------------------------1.00---------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TGGACAACTGTTTGGCGGCCGCA....................2311.001.00-------------------------------------------1.00-----------------------------------------------------------
..........................................................................................................................................................................................................CGGATTTGGAGCAGGGAG....................................................................................................181.000.00-------------------------------------------------------------------1.00-----------------------------------
.......................................................................CGGAAGGGGTAGATGAAA.......................................................................................................................................................................................................................................1811.001.00-----------1.00-------------------------------------------------------------------------------------------
...............................................................................GTAGATGAAAATGGAAGGGGCG...........................................................................................................................................................................................................................2211.001.00-----------------------------------1.00-------------------------------------------------------------------
..............................................................CCTAAGTAGCGGAAGGGGTAG.............................................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------1.00-------------------------------------
......................................................................GCGGAAGGGGTAGATGAAA.......................................................................................................................................................................................................................................1911.001.00--1.00----------------------------------------------------------------------------------------------------
.............................................................CCCTAAGTAGCGGAAGGGGTAGATGAA........................................................................................................................................................................................................................................2711.001.00--------------------1.00----------------------------------------------------------------------------------
..............................................................................................AGGGGCGGGCGCGCTCCG................................................................................................................................................................................................................181.000.00-------------------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................................................CCACCCGGATTTGGAGCAG........................................................................................................1911.001.00--------------------------------------------------------------------------------------1.00----------------
.........................................GTGAGCCGGGTGAGGGGGCT...................................................................................................................................................................................................................................................................2011.001.00-----------------------------------------------1.00-------------------------------------------------------
..........................................................................................TGGAAGGGGCGGGCGCGC....................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------1.00--------------------------------
...............................................................CTAAGTAGCGGAAGGGG................................................................................................................................................................................................................................................1711.001.00----------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................CGGCCGCAGCGCTGAATGGGG.......2111.001.001.00------------------------------------------------------------------------------------------------------
..................................................................................GATGAAAATGGAAGGGGC............................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------1.00-------------
...........................................................................AGGGGTAGATGAAAATGGAAGGGG.............................................................................................................................................................................................................................2411.001.00--------------1.00----------------------------------------------------------------------------------------
.............................GCGCCTTGACGAGTGAGCC................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------1.00------------------------
..............................................................................GGTAGATGAAAATGGAAGGGG.............................................................................................................................................................................................................................2111.001.001.00------------------------------------------------------------------------------------------------------
.........................................................................GAAGGGGTAGATGAAAATGGC..................................................................................................................................................................................................................................211.000.00----------------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TGGACAACTGTTTGGCGG.........................1811.001.00-----------------------------------------1.00-------------------------------------------------------------
.....................................................................................................................................................................................................................................................................CCCACTCAGGGAGCCATGGAC......................................2111.001.00------------1.00------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................AGGGAGCCATGGACAACTG.................................1911.001.001.00------------------------------------------------------------------------------------------------------
....................................................................TAGCGGAAGGGGTAGATGAAA.......................................................................................................................................................................................................................................2111.001.00------1.00------------------------------------------------------------------------------------------------
.................................CTTGACGAGTGAGCCGGG.............................................................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------1.00------------------------------
......................................................................GCGGAAGGGGTAGATGAAAATG....................................................................................................................................................................................................................................2211.001.00------------------------------------------------------------------1.00------------------------------------
..........................................................................................................................................................................TCTCCAGGGAGGTCGAGGC...................................................................................................................................1911.001.00---------1.00---------------------------------------------------------------------------------------------
...............................................................CTAAGTAGCGGAAGGAAAA..............................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------1.00----------------------------------
.....................................................................................................................................................................................................................................................................................TGGACAACTGTTTGGCGGCTGGT....................231.000.00---------------------------------------------------------------------------------1.00---------------------
.......................................................................CGGAAGGGGTAGATGAAAAT.....................................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------1.00-----------------------
.................................................................AAGTAGCGGAAGGGGTAGATG..........................................................................................................................................................................................................................................2111.001.00-----------------------------1.00-------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TGGACAACTGTTTGGCGGCCGCCGC..................251.000.00-----1.00-------------------------------------------------------------------------------------------------
................................................................................................................................................CGTTGGGGGCGGACCAGGAGCGGTGG......................................................................................................................................................2611.001.00----------1.00--------------------------------------------------------------------------------------------
.......................................................................CGGAAGGGGTAGATGAAAATGG...................................................................................................................................................................................................................................2211.001.00-----------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................GCGTTGGGGGCGGACCAG...............................................................................................................................................................1811.001.00------1.00------------------------------------------------------------------------------------------------
.....................................................................AGCGGAAGGGGTAGATGAAAA......................................................................................................................................................................................................................................2111.001.00-------1.00-----------------------------------------------------------------------------------------------
...........................................................................................GGAAGGGGCGGGCGCCGTC..................................................................................................................................................................................................................191.000.00----------------------------------------1.00--------------------------------------------------------------
...........................................GAGCCGGGTGAGGGGGCT...................................................................................................................................................................................................................................................................1811.001.00-------------------------------------------------------------------------------------1.00-----------------
........................................................................................................................................................................................................................................................................................ACAACTGTTTGGCGGCCGCAG...................2111.001.00---------------------------------------------1.00---------------------------------------------------------
....................................................................................................................................................................................................................................................................................ATGGACAACTGTTTGATC..........................181.000.00-------------------------------------------------------------1.00-----------------------------------------
.................................CTTGACGAGTGAGCCGG..............................................................................................................................................................................................................................................................................1711.001.00--------------------------------------------1.00----------------------------------------------------------
.....................................................................AGCGGAAGGGGTAGATGAAAATTT...................................................................................................................................................................................................................................241.000.00--------------------------1.00----------------------------------------------------------------------------
.....................................................................AGCGGAAGGGGTAGATGAA........................................................................................................................................................................................................................................1911.001.00------------------------------------1.00------------------------------------------------------------------
..............................................................................................................................................TGCGTTGGGGGCGGACCAGG..............................................................................................................................................................2011.001.00----------------------------------------------------------------------------------1.00--------------------
.....................................................................................GAAAATGGAAGGGGCGGGC........................................................................................................................................................................................................................1920.500.50---------------------------------------------------------------------------------------------0.50---------
.................................................................................AGATGAAAATGGAAGGGG.............................................................................................................................................................................................................................1820.500.50----------------------------0.50--------------------------------------------------------------------------
......................................................................................AAAATGGAAGGGGCGG..........................................................................................................................................................................................................................1620.500.50---------------------------0.50---------------------------------------------------------------------------
...........................................................................AGGGGTAGATGAAAATGG...................................................................................................................................................................................................................................1820.500.50-------0.50-----------------------------------------------------------------------------------------------
........................................................................GGAAGGGGTAGATGAA........................................................................................................................................................................................................................................1620.500.50----------------------------------------------------------------------------------------------0.50--------
...............................................................................GTAGATGAAAATGGAAGGG..............................................................................................................................................................................................................................1920.500.50--------------------------------------------------------------------------------------------0.50----------
...............................................................................GTAGATGAAAATGGAAG................................................................................................................................................................................................................................1740.500.500.50------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................CGAGGCTGGGGCTCCC.........................................................................................................................1630.330.33-----------------------------------------------------------------------------------------------0.33-------
......................................................................................................................................................................................................................AGGGTCGCCGCGGCC...........................................................................................1530.330.33------------------------------------------------------------------------------------------------0.33------
.................................................................................................................................................................................................................................................................................................TGGCGGCCGCAGCGC................1540.250.25--------------------------------------------------------------------------------------------------0.25----
...................................................................................ATGAAAATGGAAGGGG.............................................................................................................................................................................................................................1670.140.14---------------0.14---------------------------------------------------------------------------------------

Antisense strand
CCCTCTTCCTAGAATAGCGTTGCGCGCATGCGCCTTGACGAGTGAGCCGGGTGAGGGGGCTCCCTAAGTAGCGGAAGGGGTAGATGAAAATGGAAGGGGCGGGCGCGCTAGGCCTAGTCCTGGCTGGGCTCCCGCTGGAGTGTGCGTTGGGGGCGGACCAGGAGCGGTGGTCTCCAGGGAGGTCGAGGCTGGGGCTCCCACCCGGATTTGGAGCAGGGTCGCCGCGGCCCAGCTGACCCGCCGGCGTTTGTACGTTGTGTGCCCACTCAGGGAGCCATGGACAACTGTTTGGCGGCCGCAGCGCTGAATGGGGTGGACCG
.............................................................................((((..((....))......((((....))))..))))..((((((((..((((((((........))...)))))))).)))))).............................................................................................................................................................
..........................................................................75.............................................................................................170....................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040040(GSM532925)
G612N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359187(GSM359187)
HepG2_2pM_1. (cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM532874(GSM532874)
G699T. (cervix)		SRR040036(GSM532921)
G243N. (cervix)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR038860(GSM458543)
MM426. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR040012(GSM532897)
G648N. (cervix)		SRR189786SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR029125(GSM416754)
U2OS. (cell line)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR029129(GSM416758)
SW480. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		GSM956925PAZD5SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................................................................................................................................................................................................................................ATGGACAACTGTTTGTTG.......................... 186.000.00---6.00---------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................TGTACGTTGTGTGCCCCTTA.................................................... 201.000.00----------------------1.00--------------------------------------------------------------------------------
..................................................................AGTAGCGGAAGGGGTGGCA........................................................................................................................................................................................................................................... 191.000.00----------------------------1.00--------------------------------------------------------------------------
...............................GCCTTGACGAGTGAGTGTT.............................................................................................................................................................................................................................................................................. 191.000.00-----------------------------------------------------------------------------------1.00-------------------
.............................................................CCCTAAGTAGCGGAAGG.................................................................................................................................................................................................................................................. 171.000.00-------------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................................................................................................CAGGGTCGCCGCGGCCGG......................................................................................... 181.000.00---------------------1.00---------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................ATGGACAACTGTTTGTTC.......................... 181.000.00---1.00---------------------------------------------------------------------------------------------------
........................................................................................................CAGGACTAGGCCTAGCGC...................................................................................................................................................................................................... 1811.001.00-----------------------1.00-------------------------------------------------------------------------------
........................................................................................................................................................GCGGACCAGGAGCGGGCGC..................................................................................................................................................... 191.000.00----------------1.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................CAGGGAGGTCGAGGCTCCC............................................................................................................................... 191.000.00-----------------------------------------------------------------------------1.00-------------------------
......................................................................................................................................................................................................................AGGGTCGCCGCGGCCAGGC....................................................................................... 1931.000.00----------------1.00--------------------------------------------------------------------------------------
............................................................................................CGCGCCCGCCCCTTC..................................................................................................................................................................................................................... 1560.830.83-------------------------------------------------------------------------------------------0.50--------0.170.17-
...........................................................................................CGCGCCCGCCCCTTCC..................................................................................................................................................................................................................... 1640.500.50-------------------------------------------------------------------------------------------------0.25-0.25---
...........................................................................................................................................................................................................................................................................TGTCCATGGCTCCCTG..................................... 1670.140.14------------------------------------------------------------------------------------------------------0.14