ID: uc001hog.1_intron_1_0_chr1_224195120_f.3p
GENE: AK124970(2)
chr1:224196822-224197071+


(1)
AGO1.ip OTHER.mut 		(10)
CELL-LINE 		(1)
HEART 		(2)
LIVER 		(2)
OTHER 		(6)
SKIN 		(1)
XRN.ip

Sense strand
CATGGGCAAATTCTTAGGTAAGACAAAAACACAGCCCCAAGGGCAGGTAGTAATTTTTTCAGAAAAAGGTAAGGCAATCATTTATCTCAGTCTGCCCAGGACAGTCCCAATTTACACATGTATATTCTCCCAATCTGTAGGCTGTCTTTTCATTTTGTTGATTATTTCATTTAATTTTTTATTATTTATTTATTTTATAGAGACAGATCTCATTATGTTGCCCAGGGTGATCCTTGATCTCCTGGCCTCA
......................................................................................................................................(((((((.((...............(((((.......)))))..............)).)))))))..................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
................................................................................................................................................................ATTATTTCATTTAATTTTTTATTATTTATTTA..........................................................3217.007.005.00--2.00-----------------
.............................................................................................................................................................................ATTTTTTATTATTTATTTATTTTTTAG..................................................276.000.001.004.00---1.00---------------
....................................................................................................................................................................................ATTATTTATTTATTTTATAG..................................................2064.834.831.671.33-0.83-0.83-0.17-------------
........................................................................................................................................................................ATTTAATTTTTTATTATTTATTTATTTTATAG..................................................3214.004.003.001.00-------------------
.......................................................................................................................................................................CATTTAATTTTTTATTATTTATTTATTTTATAG..................................................3313.003.001.00--1.00-1.00---------------
..............................................................................................................................................................................TTTTTTATTATTTATTTATTTTAAG...................................................253.000.00-3.00-------------------
..............................................................................................................................................................................TTTTTTATTATTTATTTATTTTTTCG..................................................263.000.001.001.00-1.00-----------------
..........................................................................................................................................AGGCTGTCTTTTCATTTTGTTGACT.......................................................................................252.000.00--2.00------------------
..................................CCCCAAGGGCAGGTAGTAATTTTTTCAG............................................................................................................................................................................................2812.002.00-------1.00-------1.00-----
.................................................................................................................................................................TTATTTCATTTAATTTTTTATTATTTATTTA..........................................................3112.002.002.00--------------------
..............................................................................................................................................................................TTTTTTATTATTTATTTATTTTATAG..................................................2621.501.50-1.00---0.50---------------
..........................................................................................................................................................................TTAATTTTTTATTATTTATTTATTTTATAG..................................................3021.501.500.50----1.00---------------
...............................................................................................................................................................................TTTTTATTATTTATTTATTTTATAG..................................................2531.331.331.00--0.33-----------------
....................................................................................................................................ATCTGTAGGCTGTCTTTTCATCT...............................................................................................231.000.00----1.00----------------
..........................................................................................................................................AGGCTGTCTTTTCATTTTGCTG..........................................................................................221.000.00----1.00----------------
..................................................................................................................................................................................TTATTATTTATTTATTTCTCG...................................................211.000.00---1.00-----------------
..........................................................................................................................................AGGCTGTCTTTTCATTTTGTTGACTA......................................................................................261.000.00----1.00----------------
..............................................................................................CCCAGGACAGTCCCACG...........................................................................................................................................171.000.00----1.00----------------
................................................................................................................................................................ATTATTTCATTTAATTTTTTATTATTTATTTAT.........................................................3311.001.00-----1.00---------------
................................................................................................................................................TCTTTTCATTTTGTTGATCC......................................................................................201.000.00----1.00----------------
..............................................................................................................................................................................TTTTTTATTATTTATTTATTTTTTAG..................................................261.000.00-1.00-------------------
...........................................................................................................................................................................TAATTTTTTATTATTTATTTATTTTG.....................................................261.000.00-1.00-------------------
...................................................................................................................................................................ATTTCATTTAATTTTTTAAAG..................................................................211.000.00------------1.00--------
..........................................................................................................................................................................TTAATTTTTTATTATTTATTTATTTTACAG..................................................301.000.001.00--------------------
....................................................................................................................................ATCTGTAGGCTGTCTTTTCATTTTGCTGA.........................................................................................291.000.00--1.00------------------
..............................................................................................................................................................................TTTTTTATTATTTATTGGT.........................................................191.000.00--1.00------------------
.................................................................................................................................................................TTATTTCATTTAATTTTTTATTATTTATAG...........................................................301.000.00-1.00-------------------
..........................................................................................................................................AGGCTGTCTTTTCATTTTGTTGACCA......................................................................................261.000.00----1.00----------------
..................................CCCCAAGGGCAGGTAGTAATTTTT................................................................................................................................................................................................2411.001.00---------1.00-----------
..........................................................................................................................................AGGCTGTCTTTTCATTTTGTTGATC.......................................................................................251.000.00--1.00------------------
.............................................................................................GCCCAGGACAGTCCCAATTTACACATGTATA..............................................................................................................................3120.500.50----------------0.50----
......................................................................................................................................CTGTAGGCTGTCTTTTCATTTTGTTG..........................................................................................2620.500.50--0.50------------------
............................................................................................................................TTCTCCCAATCTGTAGGCTGTCTTTTC...................................................................................................2720.500.50--0.50------------------
..........................................................................................................................TATTCTCCCAATCTGTAGGCTGTC........................................................................................................2420.500.50------------------0.50--
........................................................................................................TCCCAATTTACACATGTATATTCTCCCAATCTG.................................................................................................................3320.500.50-0.50-------------------
............................................................................................................................................................................AATTTTTTATTATTTATTTATTTTATAG..................................................2820.500.50---0.50-----------------
...........................................................................................................................................................................TAATTTTTTATTATTTATTTATTTTATAG..................................................2920.500.50-0.50-------------------
................................................................................................................TACACATGTATATTCTCCCAATCTGTAGGC............................................................................................................3020.500.50-----------------0.50---
..............................................................................CATTTATCTCAGTCTGC...........................................................................................................................................................1730.330.33--------------------0.33
................................................................................................................................................................................TTTTATTATTTATTTATTTTATAG..................................................2430.330.33---0.33-----------------
.................................................................................................................................................................................TTTATTATTTATTTATTTTATAG..................................................2330.330.330.33--------------------
................................................................................................................................................................ATTATTTCATTTAATTTTTTA.....................................................................2130.330.330.33--------------------
..................................................................................................................................................................................TTATTATTTATTTATTTTATAG..................................................2240.250.250.25--------------------

Antisense strand
CATGGGCAAATTCTTAGGTAAGACAAAAACACAGCCCCAAGGGCAGGTAGTAATTTTTTCAGAAAAAGGTAAGGCAATCATTTATCTCAGTCTGCCCAGGACAGTCCCAATTTACACATGTATATTCTCCCAATCTGTAGGCTGTCTTTTCATTTTGTTGATTATTTCATTTAATTTTTTATTATTTATTTATTTTATAGAGACAGATCTCATTATGTTGCCCAGGGTGATCCTTGATCTCCTGGCCTCA
......................................................................................................................................(((((((.((...............(((((.......)))))..............)).)))))))..................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
............................................................................................TGCCCAGGACAGTCCCAAAC.......................................................................................................................................... 201.000.00------1.00--------------
...................................................................................................................................................................................................................ATTATGTTGCCCAGGGAATC................... 201.000.00--------1.00------------
.................GTAAGACAAAAACACGCT....................................................................................................................................................................................................................... 181.000.00----------1.00----------
......................ACAAAAACACAGCCCCAAAT................................................................................................................................................................................................................ 201.000.00--1.00------------------
..............................................................................................CCCAGGACAGTCCCAGGAG......................................................................................................................................... 191.000.00-------------1.00-------
...........................................................................CTGGGCAGACTGAGATAAATGATT....................................................................................................................................................... 2421.001.00-----------1.00---------
...........................................................................CTGTCCTGGGCAGACTGAGATAAATGATT.................................................................................................................................................. 2920.500.50------0.50--------------
............................................TTTTTCTGAAAAAATTACTACCT....................................................................................................................................................................................... 2320.500.50-------------------0.50-