ID: uc001fmi.1_intron_12_0_chr1_155903641_r
GENE: KIAA0907(1)
chr1:155903591-155904176-


(1)
AGO1.ip
(10)
B-CELL
(5)
BRAIN
(10)
BREAST
(40)
CELL-LINE
(5)
CERVIX
(3)
HEART
(5)
HELA
(2)
LIVER
(3)
OTHER
(1)
RRP40.ip
(26)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
GAAGCGGTCGCCATGTCCGCGGGGAGCGCGACACATCCTGGAGCTGGCGGGTACGGCTTCAGGGGCGAGGGCATCGGAGCGAGCACTGGGGCGCAGGAGAGGCGGAGGGACCCTGAGAAGCTGCGTATAGGGTGGAAGGGTCCTTAAGTGGGAAGTAAAGGGCTGGACGTTTGGGGAGAAGGATCTTGAGCAGGCCTGGGGCCCTTAAAGGGCCGGCGGGGATCCGAGGGAGGAGGCAAACGGGGACTTTTGGAAGGGCGAGCCAAGGGGAAGGCGTAAACTAGAGCGTGTAGGATAGAGTGGAGTCTTTCGATATAGGTGACAGTAGAAACGAAAGATTTTGGGGAAGGGTTGAAAGTGGGGGTTTGTTAAATAAGCAATAATTGTTTAAGGAGAGGGGAGTTTTAGATTTGGAAGGTGATTCGGAGGTGTAAATGGAATATAATAGAGGGAAAATGGGGTGCTAAGGCGTAGTAAGGAAAGAATAACATACACGAAAGCTTTGGGGCCTAATGTTTTCCTTTTTCTCCATGTAGGCGCCGCAGCAAATGGGACCAACCAGCTCCAGCCCCACTTCTCTTCCTCC
.......................................................((..(((..((....((......))..)).)))..)).........((..(((((((((......((((.......)))).)))))))))..)).....................................................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150..................................................................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR037935(GSM510473)
293cand3. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR029128(GSM416757)
H520. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR038861(GSM458544)
MM466. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR029130(GSM416759)
DLD2. (cell line)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577746(Rovira)
total RNA. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTAAGGCGTAGTAAGGAAAGAATAACATACACGAAAGCTTTGGGGCCTAATGTTTTCCTTTTTCTCCATGTAG..................................................7618.008.00---8.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................ATAGGTGACAGTAGAAACGAAAGATTTTGG..................................................................................................................................................................................................................................................3017.007.00------3.004.00---------------------------------------------------------------------------------------------------------
................................ACATCCTGGAGCTGGCGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1917.007.00------4.003.00---------------------------------------------------------------------------------------------------------
..........................CGCGACACATCCTGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1717.007.00-6.00----------------------------------------------------------------------------------1.00----------------------------
..AGCGGTCGCCATGTCCGCGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.006.00--------1.00---------1.001.00----------------------2.00--------------------------------------------------1.00-------------------
..................................................GTACGGCTTCAGGGGCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.006.003.003.00---------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAAGGCGTAGTAAGGAAAGAATAACATACACGAAAGCTTTGGGGCCTAATGTTTTCCTTTTTCTCCATGTAG..................................................7516.006.00---6.00-------------------------------------------------------------------------------------------------------------
.....................................................CGGCTTCAGGGGCGAGGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.005.00-5.00---------------------------------------------------------------------------------------------------------------
...............................CACATCCTGGAGCTGGCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.005.004.00-1.00--------------------------------------------------------------------------------------------------------------
..........................CGCGACACATCCTGGAGCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.005.00----4.00------------------------1.00-----------------------------------------------------------------------------------
..................................................GTACGGCTTCAGGGGCGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004.004.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTAGATTTGGAAGGT.......................................................................................................................................................................1814.004.00-4.00---------------------------------------------------------------------------------------------------------------
.............................................................GGGGCGAGGGCATCGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.004.00----4.00------------------------------------------------------------------------------------------------------------
......GTCGCCATGTCCGCGGGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.004.00--3.00-----------------------------------------1.00--------------------------------------------------------------------
.......................................................GCTTCAGGGGCGAGGGCATCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.004.00--------4.00--------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................ATCCGAGGGAGGAGGTGTG..........................................................................................................................................................................................................................................................................................................................................................1953.202.00-----3.20-----------------------------------------------------------------------------------------------------------
.AAGCGGTCGCCATGTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003.00----------2.00------------------------------------------------------------1.00-----------------------------------------
..................................................GTACGGCTTCAGGGGCGAGGGCATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003.00--3.00--------------------------------------------------------------------------------------------------------------
...................................................................AGGGCATCGGAGCGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003.00---------------------------2.00----------------------------1.00--------------------------------------------------------
...........CATGTCCGCGGGGAGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003.00---------------------------------------------2.00--------------------------1.00----------------------------------------
........................................................................................................................CTGCGTATAGGGTGGAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003.003.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................ATCCGAGGGAGGAGGTGT...........................................................................................................................................................................................................................................................................................................................................................1852.602.00-----2.60-----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGCGTAGTAAGGAAAGAA.....................................................................................................2112.002.00--2.00--------------------------------------------------------------------------------------------------------------
..........................CGCGACACATCCTGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.00--------------2.00--------------------------------------------------------------------------------------------------
.........GCCATGTCCGCGGGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.00-----------------------------------------1.00-----1.00-----------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTGCTAAGGCGTAGTAAGGAAAGAATAACA................................................................................................3212.002.00----------------------------------2.00------------------------------------------------------------------------------
..........................................................................................................GGGACCCTGAGAAGCTGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00------------------1.001.00---------------------------------------------------------------------------------------------
.......................................................................................................GGAGGGACCCTGAGAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.002.00----------------------------------------------------------------------------------------------------------------
..................................................GTACGGCTTCAGGGGCGAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.00--2.00--------------------------------------------------------------------------------------------------------------
......................................................................................................CGGAGGGACCCTGAGAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002.00---------------------------------------1.00---------1.00---------------------------------------------------------------
............................CGACACATCCTGGAGCTGGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002.00-----------------------------------1.00-------------------------------------------1.00---------------------------------
..................................................................................................................................................................CTGGACGTTTGGGGAGAAGGAT..................................................................................................................................................................................................................................................................................................................................................................................................................2212.002.00--2.00--------------------------------------------------------------------------------------------------------------
.AAGCGGTCGCCATGTCCGCGGGGAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002.00--------------------------------2.00--------------------------------------------------------------------------------
.........................GCGCGACACATCCTGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00----------------1.00---------------------------------------------------------------1.00--------------------------------
..................................................GTACGGCTTCAGGGGCGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.006.00-2.00---------------------------------------------------------------------------------------------------------------
............................................................................................................GACCCTGAGAAGCTGCGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00------------------------------------2.00----------------------------------------------------------------------------
..AGCGGTCGCCATGTCCGCGGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002.00------------------1.001.00---------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................ATCCGAGGGAGGAGG..............................................................................................................................................................................................................................................................................................................................................................1552.002.00-----2.00-----------------------------------------------------------------------------------------------------------
..................................................GTACGGCTTCAGGGGCGAGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002.00--2.00--------------------------------------------------------------------------------------------------------------
...................CGGGGAGCGCGACACATCCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00------------------------------------------------------------------------------------------------------1.00----------
.........................................................................................................................TGCGTATAGGGTGGAAAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-----------1.00-----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................TGGAAGGGCGAGCCAAGGGGAAGGCG......................................................................................................................................................................................................................................................................................................................2611.001.00--------------------1.00--------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................AACTAGAGCGTGTAGGATAGAGT.............................................................................................................................................................................................................................................................................................2311.001.00-------------------------1.00---------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................GAGCGTGTAGGATAGAG..............................................................................................................................................................................................................................................................................................1711.001.00--1.00--------------------------------------------------------------------------------------------------------------
...........................GCGACACATCCTGGAGCTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------------------1.00------------------------------------------------------------------
..................................ATCCTGGAGCTGGCGCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------1.00---------------------------------------------------------------------
.........................GCGCGACACATCCTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-----------------------------------------------------------------------------1.00-----------------------------------
...................................................................................................AGGCGGAGGGACCCTGAGAAGCTGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.001.00----------------------------------------------------------------------------------------------------------------
....................................CCTGGAGCTGGCGGGTACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------1.00------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................GGACTTTTGGAAGGGAAGA....................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------1.00-------------------------------------------
.................................................................................................................................................................................GAAGGATCTTGAGCAGGCCTG....................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------1.00---------------------------------------------------------------------------------------------------
............................................................AGGGGCGAGGGCATCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------1.00------------------------------------------------------------------------------------------
..................................................GTACGGCTTCAGGGGCGAGGGCATCGGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00---------------------------------------------------------------------------------1.00-------------------------------
.....................................................................................................GCGGAGGGACCCTGAGAAGCTGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00----------------------------------------1.00------------------------------------------------------------------------
....CGGTCGCCATGTCCGCGGGGAGCGCGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00-------------------------------------------1.00---------------------------------------------------------------------
.......................................................................CATCGGAGCGAGCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.001.00--------------------------------------------------------------------------------------------1.00--------------------
.........................................................................................................AGGGACCCTGAGAAGCTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.001.00------------0.50------------------------------------------------------------------------------------------------0.50---
..AGCGGTCGCCATGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.001.00---------1.00-------------------------------------------------------------------------------------------------------
..........................CGCGACACATCCTGGAGCTGGCGGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................271.000.00-----------------1.00-----------------------------------------------------------------------------------------------
....................GGGGAGCGCGACACATCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................AAGGGTTGAAAGTGGTCCA.............................................................................................................................................................................................................................191.000.00----------------------------------------------------------------------------------------------------1.00------------
............................................................................................................................................................................................AGCAGGCCTGGGGCCCTTAA..........................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------1.00-----
...............TCCGCGGGGAGCGCGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-------------------------------------1.00---------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATGTTTTCCTTTTTCTCCATGTAG..................................................2711.001.00---------------1.00-------------------------------------------------------------------------------------------------
........................................................................ATCGGAGCGAGCACTGGGGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------------------------------------------------------------------1.00-----------------------
...................................................................................................AGGCGGAGGGACCCTGAGAAGCTGCGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00--1.00--------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................AACTAGAGCGTGTAGGATA.................................................................................................................................................................................................................................................................................................1911.001.00----------------1.00------------------------------------------------------------------------------------------------
.......TCGCCATGTCCGCGGGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------------------------------------------------------------------1.00--------------------------------------------
...............................................................GGCGAGGGCATCGGAGCGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------------------------------------------------1.00---------------------------------------------------------
.................................................................................................AGAGGCGGAGGGACCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00-----------------------1.00-----------------------------------------------------------------------------------------
...................................................................AGGGCATCGGAGCGAGCACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------------------------------------------------------------------------------1.00------
.......................................................................CATCGGAGCGAGCACTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------1.00-----------------------------------------------------------------------------------------------
......................................TGGAGCTGGCGGGTACGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00---------1.00-------------------------------------------------------------------------------------------------------
................................................................................GAGCACTGGGGCGCAGGAGAGGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00--------------1.00--------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGTAAAGGGCTGGACGTTTGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.001.00----------------------------------------------------------------------------------------------------------------
..................................ATCCTGGAGCTGGCGGGTACGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------------------------------------------------------------------------1.00-------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATGTTTTCCTTTTTCTCCATGTAT..................................................271.000.00---------------1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTAAGGCGTAGTAAGGAAAGAA.....................................................................................................2511.001.00--------------------------------------1.00--------------------------------------------------------------------------
............................CGACACATCCTGGAGCTGGCGGGTACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00-----------------------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................................................................................................................GAGGAGGCAAACGGGGACTT.................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------1.00-----------------------------------------------------------------------------------------------------
...............................CACATCCTGGAGCTGGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.001.00----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGAAGGTGATTCGGAGG.............................................................................................................................................................2111.001.00-------------1.00---------------------------------------------------------------------------------------------------
................................ACATCCTGGAGCTGGCGGGTACGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-------------------------------------------------------------1.00---------------------------------------------------
........................AGCGCGACACATCCTGGAGCTGGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00---------1.00-------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CGAAAGATTTTGGGGAAGGGTTGAAAG....................................................................................................................................................................................................................................2711.001.00--------------------------------------1.00--------------------------------------------------------------------------
........CGCCATGTCCGCGGGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------------------------1.00----------------
..........................................................................................................................................................................................TGAGCAGGCCTGGGGCCCTTAAAGGGC.....................................................................................................................................................................................................................................................................................................................................................................................2711.001.00-----------1.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................GTGACAGTAGAAACGAAAGATTTTGGG.................................................................................................................................................................................................................................................2711.001.00---------------------------------------------------1.00-------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................AGTGGGGGTTTGTTAAT.....................................................................................................................................................................................................................171.000.00---------------------------------1.00-------------------------------------------------------------------------------
......................GGAGCGCGACACATCCTGGAGCTGGCGGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00----------------------------------------------------------------------1.00------------------------------------------
....................GGGGAGCGCGACACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.001.00----------------------------1.00------------------------------------------------------------------------------------
........................................................................................................GAGGGACCCTGAGAAGCTGCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----------1.00-----------------------------------------------------------------------------------------------------
.....................................................................................CTGGGGCGCAGGAGAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------------1.00-----------------
....................................................................................................................................................................................................................................................................................................................................................TTGGGGAAGGGTTGAAAGTGGGGGTTTGTTA.......................................................................................................................................................................................................................3111.001.00------------------------------------------------------1.00----------------------------------------------------------
..................................................GTACGGCTTCAGGGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-1.00---------------------------------------------------------------------------------------------------------------
...........................GCGACACATCCTGGAGCTGGCGGGTACGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00------------------------------------------------------------------------------------------1.00----------------------
.......................................................................................................................................................GAAGTAAAGGGCTGGACGT................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------1.00---------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................AGGGGAAGGCGTAAACTAGAG............................................................................................................................................................................................................................................................................................................2111.001.00-----------------------------1.00-----------------------------------------------------------------------------------
....................................CCTGGAGCTGGCGGGTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------------------------------------------1.00----------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................GGTGACAGTAGAAACGAAAGATTTTGGG.................................................................................................................................................................................................................................................2811.001.00---------------------------------------1.00-------------------------------------------------------------------------
........................AGCGCGACACATCCTGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------------------------1.00------------------------------------------------------
.........................................................................................................AGGGACCCTGAGAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1831.001.000.67------------------------------------------------0.33---------------------------------------------------------------
..................................................GTACGGCTTCAGGGGCGAGGGCCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00--1.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CTTGAGCAGGCCTGGGGCCCTT............................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------------1.00-----------------------------------------------------------------------------
..................................................GTACGGCTTCAGGGGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.001.00----------------------------------------------------------------------------------------------------------------
.......................GAGCGCGACACATCCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------1.00----------------------------------------------------------------------------------------------------
.....................................................CGGCTTCAGGGGCGAGGGCATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------1.00------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTAGTAAGGAAAGAATAACATAC.............................................................................................2511.001.00-----------------------------------------------------------1.00-----------------------------------------------------
.................................CATCCTGGAGCTGGCGGGTACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.001.00----------------------------------------------------------------------------------------------------------------
...............TCCGCGGGGAGCGCGACACATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------------------------------------------1.00---------
...............................CACATCCTGGAGCTGGCGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------1.00-----------------------------
....................................................................GGGCATCGGAGCGAGCACTGGGGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00----------------------1.00------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGGGTGCTAAGGCGTAG................................................................................................................2111.001.00-----------------------------------------------------------------------------------------------------1.00-----------
.................................................................................................AGAGGCGGAGGGACCCTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00---------1.00-------------------------------------------------------------------------------------------------------
...............................CACATCCTGGAGCTGGCGGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00------------------------------------------------------------------------------------------------------------1.00----
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGGACCAACCAGCTCCAGCCCC..............2511.001.00--------------------1.00--------------------------------------------------------------------------------------------
.................................CATCCTGGAGCTGGCGGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.001.00----------------------------------------------------------------------------------------------------------------
...........................GCGACACATCCTGGAGCTGGCGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00----------------------------------------------1.00------------------------------------------------------------------
.....................................................................................................GCGGAGGGACCCTGAGAAGCTGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----------------------------------------------------1.00-----------------------------------------------------------
.....................................................CGGCTTCAGGGGCGAGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.001.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................GAAGGCGTAAACTAGAGCGTGTAG.....................................................................................................................................................................................................................................................................................................2411.001.00-------------------------------1.00---------------------------------------------------------------------------------
................................................................................................GAGAGGCGGAGGGACCCTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------1.00--------------
.........................................................................................GGCGCAGGAGAGGCGGGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------------------1.00----------------------------------------------------------------
..................................................GTACGGCTTCAGGGGCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.001.00----------------------------------------------------------------------------------------------------------------
.............................................................................................CAGGAGAGGCGGAGGGACCCTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----------------1.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................GGAGGAGGCAAACGGGGACTT.................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------------1.00------------------------------------------------------------------------
...................................................................................................AGGCGGAGGGACCCTGAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.001.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................AAGTGGGAAGTAAAGGGCTGGACGT................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00----------------------------------------------------1.00------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTTTTCTCCATTGCT..................................................201.000.00------------------------------------------------------------------1.00----------------------------------------------
...........CATGTCCGCGGGGAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------------------------------------1.00---------------------------------------------------------------------------
..................................................GTACGGCTTCAGGGGCGAGGGCATCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00---------------------------------------------------------------------------------------1.00-------------------------
..................................................GTACGGCTTCAGGGGCGAGGGCCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00--1.00--------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................AGGGCCGGCGGGGATCTTT.......................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------------------------------------1.00-----------------------------------------------
......................................................................................................................AGCTGCGTATAGGGTGGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------1.00--------------------------------------------------------------------------------------------------------
.......TCGCCATGTCCGCGGGGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00---------------1.00-------------------------------------------------------------------------------------------------
.........................................................................................................AGGGACCCTGAGAAGCGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00---------------------------------------------------------------------------------------------------------1.00-------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTAAGGCGTAGTAAGGAAAGAATAACATA..............................................................................................3311.001.00------------1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GCGTGTAGGATAGAGTGG...........................................................................................................................................................................................................................................................................................1811.001.00----------1.00------------------------------------------------------------------------------------------------------
.........GCCATGTCCGCGGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00--------------------------------------------------------------------------1.00--------------------------------------
................................ACATCCTGGAGCTGGCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------1.00------------------------------------------------------------------------------------
........................................................................................................................CTGCGTATAGGGTGGAAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------------------------1.00---------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGACCAACCAGCTCCAGC.................2111.001.00------------1.00----------------------------------------------------------------------------------------------------
..........CCATGTCCGCGGGGAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------------1.00------------------------------
................................................................................................GAGAGGCGGAGGGACCCTGAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00----------------------------------------------------------------------------------------------1.00------------------
......GTCGCCATGTCCGCGGGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--1.00--------------------------------------------------------------------------------------------------------------
..............................ACACATCCTGGAGCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00--------------------------------------------------------------------------------------1.00--------------------------
.................................................................................................AGAGGCGGAGGGACCCTGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------------------1.00-------------------------------------------------------
.........................................................................................................................................................................................................CCCTTAAAGGGCCGGGGG...............................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------1.00-------------------------------------------------------------------------------
...........................................................CAGGGGCGAGGGCATCGGAGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------------------1.00--------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGCGTAGTAAGGAAAGAATAACATACACGAAAGCTTTGGGGCCTAATGTTTTCCTTTTTCTCCATGTAG..................................................7311.001.00---1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................CTAGAGCGTGTAGGATAGAG..............................................................................................................................................................................................................................................................................................2011.001.001.00----------------------------------------------------------------------------------------------------------------
....................................................................................................GGCGGAGGGACCCTGAGAAGCTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00--------------------------------------------------------------1.00--------------------------------------------------
....................................CCTGGAGCTGGCGGGTACGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGCGTAGTAAGGAAA........................................................................................................1911.001.00----------------------------------------------------------------1.00------------------------------------------------
..................................................................................................................................................................................................................................AGGGAGGAGGCAAACGAAC.....................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------------------1.00-----------------------------------------------------------------
..........................................................................................................................................................GTAAAGGGCTGGACGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00--------------------------------------------1.00--------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTTAGATTTGGAAGGTGATT...................................................................................................................................................................2311.001.00-------------------------------------------------------------------------1.00---------------------------------------
...............................................................................................................................................................................................................................................................................................................AGTCTTTCGATATAGGTGACAGTAGAAACGA............................................................................................................................................................................................................................................................3111.001.00------------------------------------------------------------1.00----------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTGATTCGGAGGCAT..........................................................................................................................................................181.000.00----------------------------------------------------------------------------1.00------------------------------------
...........................GCGACACATCCTGGAGCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------------1.00--------
.......................GAGCGCGACACATCCTGGAGCTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00---------------------------------------------------------------------------------------------------1.00-------------
...............................CACATCCTGGAGCTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1720.500.50--------------------------------------------------------------------------------------------------------------0.50--
..........................................................................................................................................................................................................................................................................................................................................................................................AATAATTGTTTAAGGAGAG.............................................................................................................................................................................................1920.500.50--0.50--------------------------------------------------------------------------------------------------------------
........................................................................................................GAGGGACCCTGAGAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.500.50-------------0.50---------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGGGAGTTTTAG..................................................................................................................................................................................1620.500.50-----------------------0.50-----------------------------------------------------------------------------------------
..................................ATCCTGGAGCTGGCGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1790.440.44--------------0.11---------0.11--------------------------------------------------------------------------------------0.110.11
.................................................................................................AGAGGCGGAGGGACCCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.330.33---------0.33-------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................ATCCGAGGGAGGAGGTGC...........................................................................................................................................................................................................................................................................................................................................................1850.202.00-----0.20-----------------------------------------------------------------------------------------------------------

Antisense strand
GAAGCGGTCGCCATGTCCGCGGGGAGCGCGACACATCCTGGAGCTGGCGGGTACGGCTTCAGGGGCGAGGGCATCGGAGCGAGCACTGGGGCGCAGGAGAGGCGGAGGGACCCTGAGAAGCTGCGTATAGGGTGGAAGGGTCCTTAAGTGGGAAGTAAAGGGCTGGACGTTTGGGGAGAAGGATCTTGAGCAGGCCTGGGGCCCTTAAAGGGCCGGCGGGGATCCGAGGGAGGAGGCAAACGGGGACTTTTGGAAGGGCGAGCCAAGGGGAAGGCGTAAACTAGAGCGTGTAGGATAGAGTGGAGTCTTTCGATATAGGTGACAGTAGAAACGAAAGATTTTGGGGAAGGGTTGAAAGTGGGGGTTTGTTAAATAAGCAATAATTGTTTAAGGAGAGGGGAGTTTTAGATTTGGAAGGTGATTCGGAGGTGTAAATGGAATATAATAGAGGGAAAATGGGGTGCTAAGGCGTAGTAAGGAAAGAATAACATACACGAAAGCTTTGGGGCCTAATGTTTTCCTTTTTCTCCATGTAGGCGCCGCAGCAAATGGGACCAACCAGCTCCAGCCCCACTTCTCTTCCTCC
.......................................................((..(((..((....((......))..)).)))..)).........((..(((((((((......((((.......)))).)))))))))..)).....................................................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150..................................................................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR037935(GSM510473)
293cand3. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR029128(GSM416757)
H520. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR038861(GSM458544)
MM466. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR029130(GSM416759)
DLD2. (cell line)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577746(Rovira)
total RNA. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
...................................................................................................................................................................................................................GCCGGCGGGGATCCGAGGGG................................................................................................................................................................................................................................................................................................................................................................... 203.000.00------------------------2.00--------------------------------------1.00-------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGCCCCACTTCTAGGT.... 201.000.00---------------------1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGCCCCACTTCTATC..... 191.000.00---------------------1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GCCGGCGGGGATCCGAGGGG................................................................................................................................................................................................................................................................................................................................................................... 201.000.00--------------------------------------------------1.00--------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTACATGGAGAAAAAG................................................ 1811.001.00------------------------------------------------------------------------------1.00----------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCCCCACTTCTCATC.... 191.000.00------------------------------1.00----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTAAGGAAAGAATACA................................................................................................. 181.000.00-----------------------1.00-----------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGCCCCACTTCTATAT.... 201.000.00-------------------------------------------------------------------------------------------------1.00---------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCTCCAGCCCCACACG......... 201.000.00--------------------------1.00--------------------------------------------------------------------------------------
....................................................................................................GGCGGAGGGACCCTGACGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00-------------------------------------------------------------------1.00---------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCTCCAGCCCCACT........... 181.000.00-------------------------------------------------------------------------------------------1.00---------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAATATAATAGAGC....................................................................................................................................... 181.000.00-------------------------------------------------------------------------------------1.00---------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCCCCACTTCTCATA.... 191.000.00---------------------1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCCCCACTTCTCC...... 171.000.00----------------------------------------------------------------------------------------1.00------------------------
..................................................................................................................................................................................................................................................................................................................................................................AAAGTGGGGGTTTGTTG....................................................................................................................................................................................................................... 171.000.00--------------------------1.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGCCCCACTTCTATTT.... 201.000.00------------------------------1.00----------------------------------------------------------------------------------