ID: uc001fey.1_intron_5_0_chr1_154304155_f
GENE: ATP8B2(6)
chr1:154304105-154304479+


(1)
B-CELL 		(9)
BRAIN 		(11)
BREAST 		(11)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(3)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(6)
SKIN 		(1)
UTERUS

Sense strand
ATGTCTGTGTTGGTGATATTATCAAGCTAGAAAATAACCAGTTTGTGGCGGTAAGGGACAGGGTACCCCTCTAGGCCTGTAGGTTCTTCCTCTTCTTTGTGAGAAAAGGATGAATCTTTCCTGATTTACTGTTGCCTCTTAAACACCCGTGGCAGGAATCTTTCTCACACCAGGGGCTTCTGTGTCATGCTGATATGCCTGGAACTAGCCATTTATGCACCTGGAACTAAGCAAACCAAGAATGCTTAGTGGAAGGAGCCACCATTACAGCCCACTGGGGGTGGAGGTTTGCATATTTGGACTTCTCATTAGTTTTTCTCTCTAGGCGGATCTCCTCCTCCTTTCCAGCAGTGAGCCCCATGGGCTGTGTTACAT
......................................................................................................................................................................................................................................(((((((...........((((......)))).....((.(((....))).))..)))))))......(((((.......)))))............................................................
.................................................................................................................................................................................................................................226................................................................................................325................................................
SizePerfect hitTotal NormPerfect NormTAX577580(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782TAX577588(Rovira)
total RNA. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040039(GSM532924)
G531T. (cervix)		TAX577590(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR189786TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTGG.................................................................................1811.000.001.002.00---2.001.00----1.00------1.00-----------1.00--1.00----------1.00-------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTGT.................................................................................186.000.00-1.00------------1.00--------------1.00------1.00-1.001.00------------
.................................................................................GGTTCTTCCTCTTCTTAACA..................................................................................................................................................................................................................................................................................203.000.00-------2.00-------1.00------------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTGGA................................................................................193.000.00------1.00--1.001.00-----------------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTG..................................................................................173.000.00--------1.00-1.001.00----------------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTGC.................................................................................183.000.00---1.00-----1.00--1.00---------------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTTTA................................................................................192.000.00--1.00--------------------------------1.00----------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTGCT................................................................................192.000.001.00-------------1.00-------------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTGGT................................................................................192.000.00--1.00-----1.00-------------------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGCTGGA...............................................................................201.000.00----1.00-----------------------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGATTA................................................................................191.000.00---1.00------------------------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGCATGGTT.............................................................................221.000.001.00---------------------------------------------------
...........................................................AGGGTACCCCTCTAGGCCT.........................................................................................................................................................................................................................................................................................................1911.001.00---------------------------1.00------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTATA................................................................................191.000.00--1.00-------------------------------------------------
...............................................................................................TTTGTGAGAAAAGGATGA......................................................................................................................................................................................................................................................................1811.001.00-------------1.00--------------------------------------
.........................................................................................................................TGATTTACTGTTGCCTCTTAAACACCCGTG................................................................................................................................................................................................................................3011.001.00-------------------------------------1.00--------------
...........................................................................................................................................................................................................................................................GAAGGAGCCACCATTTTT..........................................................................................................181.000.00-----------------------------------------1.00----------
..................................................................................................GTGAGAAAAGGATGATGG...................................................................................................................................................................................................................................................................181.000.00----------------------------1.00-----------------------
...........................TAGAAAATAACCAGTTTGTG........................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------1.00-----------------------------
...................................................................................................................................................................................................................................................................................TGGGGGTGGAGGTTTGCACG................................................................................201.000.00----1.00-----------------------------------------------
...........................................................................................................................................................................AGGGGCTTCTGTGTCATGCTGAT.....................................................................................................................................................................................2311.001.00------------------------1.00---------------------------
......................................................................................................................................................................................................................................................................................................................................................TTCCAGCAGTGAGCCCCATGGGCTGGG......271.000.00----------------------------------1.00-----------------
.................................................................................................................................................CCCGTGGCAGGAATCTTTCTC.................................................................................................................................................................................................................2111.001.00------------------------------------------1.00---------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTTT.................................................................................181.000.001.00---------------------------------------------------
...................................................................................................................................TTGCCTCTTAAACACCCGTGGCAGG...........................................................................................................................................................................................................................2511.001.00-------------------------------------------1.00--------
................................................................ACCCCTCTAGGCCTGTAGGTTCTTCCTC...........................................................................................................................................................................................................................................................................................2811.001.00-------------------1.00--------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTATT................................................................................191.000.00------------1.00---------------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTTAG................................................................................191.000.00----1.00-----------------------------------------------
....................................................................................................................................................................................................................................................................ACCATTACAGCCCACT...................................................................................................1611.001.00-------------------------1.00--------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTAAA................................................................................191.000.00---1.00------------------------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGTGGG................................................................................191.000.00-----------------1.00----------------------------------
..........................................................................................................................................................................................................................................................................................GGAGGTTTGCATATTTGGACTT.......................................................................2211.001.00-------------1.00--------------------------------------
................................................................................................................................................................................................................................................................................................................CTCATTAGTTTTTCTTTCT....................................................191.000.00----------------1.00-----------------------------------
...................................................................................................................................................................................................................................................................................TGGGGGTGGAGGTTTTT...................................................................................171.000.00--------------------1.00-------------------------------
....................................................................................................................................................................................................................................................................................GGGGGTGGAGGTTTGCAGAG...............................................................................201.000.00---------------------1.00------------------------------
................................................................................AGGTTCTTCCTCTTCTT......................................................................................................................................................................................................................................................................................1750.600.60---------------0.20-------------------------------0.200.20---
................................................................................AGGTTCTTCCTCTTCTTAAC...................................................................................................................................................................................................................................................................................2050.400.60---------------------------------------------0.40------

Antisense strand
ATGTCTGTGTTGGTGATATTATCAAGCTAGAAAATAACCAGTTTGTGGCGGTAAGGGACAGGGTACCCCTCTAGGCCTGTAGGTTCTTCCTCTTCTTTGTGAGAAAAGGATGAATCTTTCCTGATTTACTGTTGCCTCTTAAACACCCGTGGCAGGAATCTTTCTCACACCAGGGGCTTCTGTGTCATGCTGATATGCCTGGAACTAGCCATTTATGCACCTGGAACTAAGCAAACCAAGAATGCTTAGTGGAAGGAGCCACCATTACAGCCCACTGGGGGTGGAGGTTTGCATATTTGGACTTCTCATTAGTTTTTCTCTCTAGGCGGATCTCCTCCTCCTTTCCAGCAGTGAGCCCCATGGGCTGTGTTACAT
......................................................................................................................................................................................................................................(((((((...........((((......)))).....((.(((....))).))..)))))))......(((((.......)))))............................................................
.................................................................................................................................................................................................................................226................................................................................................325................................................
SizePerfect hitTotal NormPerfect NormTAX577580(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782TAX577588(Rovira)
total RNA. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040039(GSM532924)
G531T. (cervix)		TAX577590(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR189786TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................................................................................................................................................................................................AAGCAAACCAAGAATGT.................................................................................................................................. 171.000.00--------------------------------1.00-------------------
....................................................................................................GAGAAAAGGATGAATTTG................................................................................................................................................................................................................................................................. 181.000.00----------------------------------------1.00-----------
.......................................................................................................................................................................................................................................................................................................................................GGATCTCCTCCTCCTTAT.............................. 181.000.00-----------------------1.00----------------------------
..............................................................GTACCCCTCTAGGCCAAT....................................................................................................................................................................................................................................................................................................... 181.000.00--------------------------1.00-------------------------
...........................................................................................................................................................................................................................................................................................................................TTCTCTCTAGGCGGAGCTT......................................... 191.000.00-------------------------------1.00--------------------
......................................................................................................................................................................................................................................................................CAGTGGGCTGTAATG.................................................................................................. 1580.380.38-------------------------------------------------0.120.120.12
..........................................................................................................................................................................................................................TGCTTAGTTCCAGGT.............................................................................................................................................. 1540.250.25----------------------------------------------0.25-----
.................................................................................................TCATCCTTTTCTCACA...................................................................................................................................................................................................................................................................... 1690.110.11----------------0.11-----------------------------------