ID: uc001fds.2_intron_2_0_chr1_153949252_r
GENE: (2)
chr1:153949202-153949501-


(1)
AGO2.ip 		(11)
B-CELL 		(6)
BRAIN 		(6)
BREAST 		(25)
CELL-LINE 		(3)
CERVIX 		(4)
FIBROBLAST 		(2)
HEART 		(1)
HELA 		(7)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(18)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ACTCCGCTACAGCCAAGCAGAGGCTCCCGTGCAGGAAGAGAAGCTGTCAGGTGGGTGATTGTCTGGGAACCCGACACGTCCCGTCGTTTGTTTTTGGTTTTAGTATCTTCCCCATATACCAAGAGCACAGGTGGAAAAGGCCGGCACCACATGGAATGAGGGCAAGCGCTGTGCCGGGAAGTTGGATGGGCAGAGCCTGGGAGAAATGTTTTCTGAATGGCCTGGGGCTGGCATTTATCTTTCCTTTCAGCAAGCACCTCAAATTTGCCATGCTGGCTGGTGGAAGAGTTTGTGGTAGCA
.......................................................................................................................................................(((((.(((((.(((.(((((.(((((..(((....((((...)))).(((((.....))))).)))..))))).)).))).)))..))))).)))))...................................................
.....................................................................................................................................................150.................................................................................................250................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR029128(GSM416757)
H520. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR029127(GSM416756)
A549. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM416733(GSM416733)
HEK293. (cell line)		GSM956925PAZD5SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR037931(GSM510469)
293GFP. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
..........................................................................................................................................................AATGAGGGCAAGCGCTGTGCCGGG..........................................................................................................................2417.007.00----7.00-----------------------------------------------------------------------------------
................................AGGAAGAGAAGCTGTCAGCA........................................................................................................................................................................................................................................................2027.004.507.00---------------------------------------------------------------------------------------
...............................CAGGAAGAGAAGCTGTCAGCA........................................................................................................................................................................................................................................................216.000.00-6.00--------------------------------------------------------------------------------------
................................AGGAAGAGAAGCTGTCAG..........................................................................................................................................................................................................................................................1824.504.501.00----------------------------1.00---------------------------------------------0.500.500.500.500.50--------
...........................CGTGCAGGAAGAGAAGCTGTCAG..........................................................................................................................................................................................................................................................2314.004.00---1.00--------------------------------------------1.00-----------1.00------------1.00--------------
......................................................................................................................................................ATGGAATGAGGGCAAGCGCTGTC...............................................................................................................................233.000.00-3.00--------------------------------------------------------------------------------------
................................AGGAAGAGAAGCTGTCAGCAA.......................................................................................................................................................................................................................................................2123.004.503.00---------------------------------------------------------------------------------------
................GCAGAGGCTCCCGTGCAGGAAGAGAAGC................................................................................................................................................................................................................................................................2813.003.00-----------------1.00-------------2.00--------------------------------------------------------
.............................................................................................................................................................................................................................................................................ATGCTGGCTGGTGGAAGAGTTTG........2313.003.00---2.00---------1.00--------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................TGCTGGCTGGTGGAAGAGTTTG........2213.003.00-------1.00--1.00-----------------------1.00-----------------------------------------------------
............................GTGCAGGAAGAGAAGCTGTCAGCA........................................................................................................................................................................................................................................................2413.001.00----------1.00-1.00-1.00-------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................CATGCTGGCTGGTGGAAG..............1813.003.00--3.00-------------------------------------------------------------------------------------
.............................TGCAGGAAGAGAAGCAATC............................................................................................................................................................................................................................................................193.000.00---------3.00------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................TGGCTGGTGGAAGAGTTTGT.......2012.002.00---------------------------------2.00------------------------------------------------------
.................CAGAGGCTCCCGTGCAGGAAG......................................................................................................................................................................................................................................................................2112.002.00------------------------2.00---------------------------------------------------------------
............................GTGCAGGAAGAGAAGCTGTCAGCAAG......................................................................................................................................................................................................................................................2612.001.00-----------------1.00------------------------1.00---------------------------------------------
.............................................................................................................................................................................................................................................................................ATGCTGGCTGGTGGAAGAGTTT.........2212.002.00---1.00------1.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................................ATGGCCTGGGGCTGGCATTTATCTTT..........................................................2612.002.00--------------------------------2.00-------------------------------------------------------
........................................................................................................................................................................................................................ATGGCCTGGGGCTGGCATTT................................................................2012.002.00-----------------------2.00----------------------------------------------------------------
..............................................................................................................................................................................................................................TGGGGCTGGCATTTATCTTTCCTTTCA...................................................2712.002.00---------------------------2.00------------------------------------------------------------
.........................................................................................................................................................................................................................TGGCCTGGGGCTGGCATTT................................................................1912.002.00--------------------------------------------------1.00--1.00----------------------------------
................................AGGAAGAGAAGCTGTCAGCAAG......................................................................................................................................................................................................................................................2222.004.502.00---------------------------------------------------------------------------------------
.................................GGAAGAGAAGCTGTCAG..........................................................................................................................................................................................................................................................1731.331.33-----------------0.33--------------------------------------------------------------0.33-0.330.33----
......................................................................................................................................................................CGCTGTGCCGGGAAGTTGGATGGGCAGA..........................................................................................................2811.001.00---------------------1.00------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................TGGCTGGTGGAAGAGTTTAA.......201.000.00-----------------------------------1.00----------------------------------------------------
.............................................................................................................................................CGGCACCACATGGAATGAGGGCAAGCGCTGTGC..............................................................................................................................3311.001.00------------------1.00---------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................AGAGTTTGTGGTAGCATAA191.000.00-------------------------------------------1.00--------------------------------------------
..............................................................................................................................................................................................................................TGGGGCTGGCATTTATCTTTC.........................................................2111.001.00------------------------------------------------------------------------1.00---------------
....................................................................................................................................................................................................................................................................................CTGGTGGAAGAGTTTGTG......1811.001.00-------------------------------------------------------------------1.00--------------------
................................AGGAAGAGAAGCTGTCAGTAA.......................................................................................................................................................................................................................................................2121.004.501.00---------------------------------------------------------------------------------------
.............................TGCAGGAAGAGAAGCTGTC............................................................................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------1.00----------------
.................CAGAGGCTCCCGTGCAGGACTT.....................................................................................................................................................................................................................................................................221.000.00----------------------------------------------------------1.00-----------------------------
........................................................................................................................................AAGGCCGGCACCACACGCC.................................................................................................................................................191.000.00-------------------------1.00--------------------------------------------------------------
............................GTGCAGGAAGAGAAGCTGTC............................................................................................................................................................................................................................................................2011.001.00-------------------1.00--------------------------------------------------------------------
.............................................................................................................................................................................................................................CTGGGGCTGGCATTTATCTTT..........................................................2111.001.00-----1.00----------------------------------------------------------------------------------
..................................................................................................................................................................................AAGTTGGATGGGCAGCATA.......................................................................................................191.000.00------------1.00---------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................GCCATGCTGGCTGGTGGAAGAGA...........231.000.00----------------------------------------------------------------------1.00-----------------
...............................................................................................................................................................................................................................................................................GCTGGCTGGTGGAAGAGTTT.........2011.001.00------------------------------1.00---------------------------------------------------------
...........................CGTGCAGGAAGAGAAGCTGTC............................................................................................................................................................................................................................................................2111.001.00-------------------------------------1.00--------------------------------------------------
........................................................................................................................AAGAGCACAGGTGGAAAAGGCCG.............................................................................................................................................................2311.001.00-------1.00--------------------------------------------------------------------------------
.................CAGAGGCTCCCGTGCAGGAAGAG....................................................................................................................................................................................................................................................................2311.001.00---------------------------------------1.00------------------------------------------------
......................................................................................TTTGTTTTTGGTTTTACCTC..................................................................................................................................................................................................201.000.00----------------------------1.00-----------------------------------------------------------
......................................................................................................................................................ATGGAATGAGGGCAAGCGCTGTT...............................................................................................................................231.000.00---1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................CCTCAAATTTGCCATGCTGG........................2011.001.00----------------------------------------------1.00-----------------------------------------
................................................................................................................................................CACCACATGGAATGAGGGCAAGCGCTGT................................................................................................................................2811.001.00----------------------------------------------------1.00-----------------------------------
.......................................................................................................................................................................................................................................CATTTATCTTTCCTTTCAG..................................................1911.001.00----------------------------------------1.00-----------------------------------------------
.....................................................................................................................................................................................................................................................................AATTTGCCATGCTGGCTGGTGGA................2311.001.00---------------------------------------------------1.00------------------------------------
..................................................................................................................................................................................................................TTCTGAATGGCCTGGGGCTGGCA...................................................................2311.001.00-----1.00----------------------------------------------------------------------------------
......................................................................................................................................................ATGGAATGAGGGCAAGCGCT..................................................................................................................................2011.001.00------1.00---------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................ATGCTGGCTGGTGGAAGAGTT..........2111.001.00-------1.00--------------------------------------------------------------------------------
............................................................................................................................................................................GCCGGGAAGTTGGATGGGC.............................................................................................................1911.001.00-----1.00----------------------------------------------------------------------------------
......................................................................................................................................AAAAGGCCGGCACCACATGGAATGAGGG..........................................................................................................................................2811.001.00----------------1.00-----------------------------------------------------------------------
..............................................................................................................................................................................................CAGAGCCTGGGAGAAATGTTTTCTGAATGG................................................................................3011.001.00--------------------1.00-------------------------------------------------------------------
...................................................TGGGTGATTGTCTGGGAACCC....................................................................................................................................................................................................................................2111.001.00------------------------------------------------------1.00---------------------------------
................................................................................................................................................................................GGAAGTTGGATGGGCAGAG.........................................................................................................1911.001.00--------------------------------------------1.00-------------------------------------------
......................GCTCCCGTGCAGGAAGAGAAG.................................................................................................................................................................................................................................................................2111.001.00-------------------------------------------------------1.00--------------------------------
...........................................................................................................................................................................................................AAATGTTTTCTGAATGGCCTGGGGCTGGCAT..................................................................3111.001.00------1.00---------------------------------------------------------------------------------
...............................................................................................................................................................................................................................GGGGCTGGCATTTATCTTT..........................................................1911.001.00-------------------------------------------------1.00--------------------------------------
............................................................................................................................................................TGAGGGCAAGCGCTGTA...............................................................................................................................171.000.00----------------------1.00-----------------------------------------------------------------
............................................................................................................................................................................................................................CCTGGGGCTGGCATTTATCTTT..........................................................2211.001.00--1.00-------------------------------------------------------------------------------------
.....................GGCTCCCGTGCAGGAAG......................................................................................................................................................................................................................................................................1711.001.00-----------------------------------------------------------1.00----------------------------
.........................CCCGTGCAGGAAGAGAAGCTGTCA...........................................................................................................................................................................................................................................................2411.001.00-------1.00--------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................ATGCTGGCTGGTGGAAGAGT...........2011.001.00--1.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TTTATCTTTCCTTTCAGCAAGCACCTCAAAT....................................3111.001.00----------------------------------------------------------------1.00-----------------------
..................................................................................................................................................................................................................................................................................GGCTGGTGGAAGAGTTTGTGG.....2111.001.00---1.00------------------------------------------------------------------------------------
............................................................................................................................................................TGAGGGCAAGCGCTGTAGGT............................................................................................................................201.000.00------------------------------------1.00---------------------------------------------------
...............................CAGGAAGAGAAGCTGTCAGGTGGGTGTA.................................................................................................................................................................................................................................................281.000.00-----------------------------1.00----------------------------------------------------------
................................AGGAAGAGAAGCTGTCAGC.........................................................................................................................................................................................................................................................1921.004.50------1.00---------------------------------------------------------------------------------
...............................................................................................................................................................................................................................GGGGCTGGCATTTATTT............................................................171.000.00---------------------------------------------------------1.00------------------------------
.....................................................................................................................................................CATGGAATGAGGGCAAGCGCT..................................................................................................................................2111.001.00-----------------------------------------------1.00----------------------------------------
....................................................................................................................................................................................GTTGGATGGGCAGAGCCTGGTG..................................................................................................221.000.00--------------------------1.00-------------------------------------------------------------
.....................................................................................................................................................................................................................TGAATGGCCTGGGGCTGGCAT..................................................................2111.001.00-----1.00----------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TGGAAGAGTTTGTGGTAG..1811.001.00--------------------------------------1.00-------------------------------------------------
................................................................................................................................................CACCACATGGAATGAGGGCAAGCGCTG.................................................................................................................................2711.001.00-----------------------------------------1.00----------------------------------------------
.................................................................................................................................................................................................................................................................................TGGCTGGTGGAAGAGTTTGTGGTAGC.2611.001.00-------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGAATGGCCTGGGGCTGGCATTTA...............................................................2411.001.00--------------1.00-------------------------------------------------------------------------
...........................CGTGCAGGAAGAGAAGCTGTCAGG.........................................................................................................................................................................................................................................................2411.001.00------------1.00---------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................CATGCTGGCTGGTGGAAGAGT...........2111.001.00---------------------------------------------------------------1.00------------------------
................................................................................................................................................................................................................................................................................CTGGCTGGTGGAAGAGTTTGTGGT....2411.001.00------------------------------------------------------------------1.00---------------------
.............................................................................................................................................................................................................................................................................ATGCTGGCTGGTGGAAGAGTTTGTGG.....2611.001.00---------------------1.00------------------------------------------------------------------
......................................................................................................................................................................................TGGATGGGCAGAGCCTTGC...................................................................................................191.000.00---------------------------------------------1.00------------------------------------------
.....................GGCTCCCGTGCAGGAAGAGAAGC................................................................................................................................................................................................................................................................2311.001.00-------------1.00--------------------------------------------------------------------------
........................................................................................................................................................................................................................ATGGCCTGGGGCTGGCATTTATC.............................................................2311.001.00-------------------1.00--------------------------------------------------------------------
............................GTGCAGGAAGAGAAGCTGTCAG..........................................................................................................................................................................................................................................................2211.001.00--1.00-------------------------------------------------------------------------------------
.......................CTCCCGTGCAGGAAGAGAAGCTG..............................................................................................................................................................................................................................................................2311.001.00--------------------------------------------------------1.00-------------------------------
.............................................................................................................................................................................................................................CTGGGGCTGGCATTTATCTTTA.........................................................2211.001.00------------------------------1.00---------------------------------------------------------
.........................................................................................................................................................................................................................TGGCCTGGGGCTGGCATTTATC.............................................................2211.001.00-----1.00----------------------------------------------------------------------------------
..........................................................................................................................................................AATGAGGGCAAGCGCTGTGCCGGGAAGTCGG...................................................................................................................311.000.00----------------------------1.00-----------------------------------------------------------
...............................CAGGAAGAGAAGCTGTTGA..........................................................................................................................................................................................................................................................191.000.00---------------1.00------------------------------------------------------------------------
...........................CGTGCAGGAAGAGAAG.................................................................................................................................................................................................................................................................1631.001.00--------------------------------------------------------------------------0.67---------0.33---
..............................................................................................................................................................................................................................TGGGGCTGGCATTTATCTT...........................................................1921.001.00--1.00-------------------------------------------------------------------------------------
.............................................................................................................................................CGGCACCACATGGAATGAGGGCAAGCG....................................................................................................................................2711.001.00-----------1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................TGCTGGCTGGTGGAAGAGTTTGT.......2311.001.00-------------1.00--------------------------------------------------------------------------
..............................................TCAGGTGGGTGATTGTGTAG..........................................................................................................................................................................................................................................201.000.00--------1.00-------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................GGTGGAAGAGTTTGTGGTAGCA2211.001.00--------------------------1.00-------------------------------------------------------------
..........................CCGTGCAGGAAGAGAAGCTGTCA...........................................................................................................................................................................................................................................................2311.001.00---------------1.00------------------------------------------------------------------------
.............................................................................................................................................CGGCACCACATGGAATGAGGG..........................................................................................................................................2111.001.00-----------1.00----------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................CATGCTGGCTGGTGGAAGAGTTT.........2311.001.00------1.00---------------------------------------------------------------------------------
........................................................................................................................................................................CTGTGCCGGGAAGTTGAACA................................................................................................................201.000.00--------------------1.00-------------------------------------------------------------------
.......................................................................................................TATCTTCCCCATATACCAAG.................................................................................................................................................................................2011.001.00--------1.00-------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................CTGGCTGGTGGAAGATAA..........181.000.00----------------------1.00-----------------------------------------------------------------
...............................CAGGAAGAGAAGCTGTCA...........................................................................................................................................................................................................................................................1811.001.00--1.00-------------------------------------------------------------------------------------
...........................CGTGCAGGAAGAGAAGCTGTCAGCA........................................................................................................................................................................................................................................................2511.004.00-----------------------------------------------------------------1.00----------------------
...............................CAGGAAGAGAAGCTGTCAGCAAG......................................................................................................................................................................................................................................................231.000.00---------------------------------------------------------------------1.00------------------
......................GCTCCCGTGCAGGAAGAGAAGCTGTCAG..........................................................................................................................................................................................................................................................2811.001.00------------------1.00---------------------------------------------------------------------
...................................................................................................................................................................AAGCGCTGTGCCGGGAAG.......................................................................................................................1811.001.00-------------------------1.00--------------------------------------------------------------
...............................................................................................................................................................................................................................................................................GCTGGCTGGTGGAAGAGTTTG........2111.001.00---1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................GCTGGCTGGTGGAAGAGTTTGTGGT....2511.001.00------1.00---------------------------------------------------------------------------------
...........................CGTGCAGGAAGAGAAGCTGT.............................................................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------1.00--------------------------
.............................................................................................................................................................................................................................................................................ATGCTGGCTGGTGGAAGA.............1820.500.50----------------------------------0.50-----------------------------------------------------
................................................................................................................................................................................................................................................................................CTGGCTGGTGGAAGAGTT..........1820.500.50-----------------------------------0.50----------------------------------------------------
...............................................................................................................................................................................................................................................................................GCTGGCTGGTGGAAGAGT...........1820.500.50--------------0.50-------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................GGCTGGTGGAAGAGTTT.........1720.500.50---------------0.50------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................ATGCTGGCTGGTGGAAG..............1730.330.33----------------0.33-----------------------------------------------------------------------
................................AGGAAGAGAAGCTGTCA...........................................................................................................................................................................................................................................................1730.330.33------------------------------------0.33---------------------------------------------------
................................AGGAAGAGAAGCTGTCACCT........................................................................................................................................................................................................................................................2030.330.33---------------------------------------------------------------------------------0.33------
....................................................................................................................................................................................................................................................................................CTGGTGGAAGAGTTTG........1640.250.25-------------------------------------------------------------------------------------0.25--
...............................................................................................................................................................................................................................................................................GCTGGCTGGTGGAAGAG............1740.250.25-------------------------------------0.25--------------------------------------------------
..............................................................................................................................................................................................................................................................................TGCTGGCTGGTGGAAGCATA..........2060.170.17--------------------------------------------------------------------------------------0.17-
..................................GAAGAGAAGCTGTCAG..........................................................................................................................................................................................................................................................1660.170.17---------------------------------------------------------------------------------------0.17
..............................................................................................................................................................................................................................................................................TGCTGGCTGGTGGAAG..............1660.170.17--------------0.17-------------------------------------------------------------------------

Antisense strand
ACTCCGCTACAGCCAAGCAGAGGCTCCCGTGCAGGAAGAGAAGCTGTCAGGTGGGTGATTGTCTGGGAACCCGACACGTCCCGTCGTTTGTTTTTGGTTTTAGTATCTTCCCCATATACCAAGAGCACAGGTGGAAAAGGCCGGCACCACATGGAATGAGGGCAAGCGCTGTGCCGGGAAGTTGGATGGGCAGAGCCTGGGAGAAATGTTTTCTGAATGGCCTGGGGCTGGCATTTATCTTTCCTTTCAGCAAGCACCTCAAATTTGCCATGCTGGCTGGTGGAAGAGTTTGTGGTAGCA
.......................................................................................................................................................(((((.(((((.(((.(((((.(((((..(((....((((...)))).(((((.....))))).)))..))))).)).))).)))..))))).)))))...................................................
.....................................................................................................................................................150.................................................................................................250................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR029128(GSM416757)
H520. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR029127(GSM416756)
A549. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM416733(GSM416733)
HEK293. (cell line)		GSM956925PAZD5SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR037931(GSM510469)
293GFP. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
............................................TGTCAGGTGGGTGATTCCA............................................................................................................................................................................................................................................. 191.000.00--------1.00-------------------------------------------------------------------------------
.............................TGCAGGAAGAGAAGCGAG............................................................................................................................................................................................................................................................. 181.000.00--------------------------------------------------------------------1.00-------------------
................................................................................CCGTCGTTTGTTTTTGAGG......................................................................................................................................................................................................... 191.000.00--------------------------------------------------------------1.00-------------------------
.............................................................................................................CGGCCTTTTCCACCTGTGCTCTTGGTATATGGGG............................................................................................................................................................. 3411.001.00----------------1.00-----------------------------------------------------------------------
.....GGAGCCTCTGCTTGGCTGTAGC................................................................................................................................................................................................................................................................................. 2211.001.00-----------1.00----------------------------------------------------------------------------