ID: uc001dbk.2_intron_3_0_chr1_64576641_r
GENE: (2)
chr1:64576591-64576844-


(1)
AGO2.ip
(2)
BREAST
(9)
CELL-LINE
(3)
CERVIX
(1)
HEART
(1)
LIVER
(1)
OTHER
(4)
SKIN
(1)
TESTES

Sense strand
AAACATGCTCTTCTAGGAGAAGTTTTAGTAAAAACATAAGAATGCTGCTGGTAAGGAAATCTCTAGGTGATGCCAGGGACTGACAACAGAGGATTTCTGATAGAAGAAAGAGACAAGGATTTGGACCAAGTTTCTGAATGGAATCATTGTACTTTCTTTTTTTTTTTCTTCCTTCTCCCTCCCCGCTTCACCCCCGACCTCTAGAGTTTCTTAGCAGGCATTTTGGAGGAAAAGATTTGGATCAGAAATTCAGA
......................................................................................(((((...)))))...(((((((((((.(((((...((..(((..((((....))))...)))..)).))))).)))))))))))...................................................................................
..........................................................................75..................................................................................................175.............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577589(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
GSM532877(GSM532877)
G691N. (cervix)
......................................................................................................................................................ACTTTCTTTTTTTTTTTCAAG...................................................................................214.000.00--1.001.001.00-1.00---------------
...............................................................................CTGACAACAGAGGATTAC.............................................................................................................................................................183.000.00-------2.00----1.00---------
................................................................................TGACAACAGAGGATTAC.............................................................................................................................................................173.000.00-------3.00--------------
.....................................................................................................................................................TACTTTCTTTTTTTTTTTAAG....................................................................................213.000.00--1.001.00--1.00---------------
.....................................................................................................................................................TACTTTCTTTTTTTTTTTCTTAATG................................................................................252.000.00--1.001.00------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCAGG................................................................................2412.001.002.00---------------------
.......................................................................................................................................................CTTTCTTTTTTTTTTTCTTCCAG................................................................................232.000.00--2.00-------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTTAG................................................................................242.000.001.00---1.00-----------------
.....................................................................................................................................................TACTTTCTTTTTTTTTTTCTTAG..................................................................................232.000.00---2.00------------------
............................................................................................................................................................TTTTTTTTTTTCTTCCTTCAAAT...........................................................................232.000.00-----1.001.00---------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCTC.................................................................................2312.001.001.001.00--------------------
............................................................................................................................................................TTTTTTTTTTTCTTCCGGCC..............................................................................201.000.00-1.00--------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCGAG................................................................................2411.001.001.00---------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCT..................................................................................2211.001.00----1.00-----------------
..........................................................................................................................................................TCTTTTTTTTTTTCTTCCTTTCCT............................................................................241.000.00-1.00--------------------
..........................................................................................................................................................TCTTTTTTTTTTTCTTCCTGGG..............................................................................221.000.00-1.00--------------------
.....................................................................................................................................................TACTTTCTTTTTTTTTTTGGCC...................................................................................221.000.00----1.00-----------------
........................................................................................................................................................TTTCTTTTTTTTTTTCTTCCTTCCTAG...........................................................................271.000.00---1.00------------------
..........................................................................................................................................................TCTTTTTTTTTTTCTTCCTTTAC.............................................................................231.000.00-----1.00----------------
.........................................................................................................................................................TTCTTTTTTTTTTTCTTCGGC................................................................................211.000.00----1.00-----------------
...........................................................................................................................................................................................................GAGTTTCTTAGCAGGGCT.................................181.000.00--------1.00-------------
...................................................................................................................................................................................TCCCCGCTTCACCCCGCGC........................................................191.000.00----------------1.00-----
..............................................................................................................................................................TTTTTTTTTCTTCCTTCTCCCTTG........................................................................241.000.001.00---------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTTGC................................................................................241.000.00-1.00--------------------
..........................................................................................................................................................TCTTTTTTTTTTTCTTCAGTG...............................................................................211.000.00-1.00--------------------
...........................................................................................................................................................................................................GAGTTTCTTAGCAGGGCTT................................191.000.00--------1.00-------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCCTTG..................................................................................221.000.00---1.00------------------
...............................................................................CTGACAACAGAGGATTACGA...........................................................................................................................................................201.000.00---------1.00------------
.......................................................................................................................................................CTTTCTTTTTTTTTTTCTTATA.................................................................................221.000.001.00---------------------
............................................................................................................................................................TTTTTTTTTTTCTTCCTTCTTGCG..........................................................................241.000.00-1.00--------------------
..........................................................................................................................................................TCTTTTTTTTTTTCTTCCATG...............................................................................211.000.00-1.00--------------------
........................................................................................................................................................TTTCTTTTTTTTTTTCTTCCACC...............................................................................231.000.00-1.00--------------------
.........................................................................................................................................................TTCTTTTTTTTTTTCTTCCTTTAAG............................................................................251.000.001.00---------------------
.......................................................................................................................................................CTTTCTTTTTTTTTTTCTTCCTCAG..............................................................................251.000.001.00---------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCCAG...................................................................................211.000.00--1.00-------------------
.....................................................................................................................................................TACTTTCTTTTTTTTTTTCCTG...................................................................................221.000.00-----1.00----------------
.......................................................................................................................................................CTTTCTTTTTTTTTTTCTTATAG................................................................................231.000.00-----1.00----------------
..........................................................................................................................................................TCTTTTTTTTTTTCTTCGGC................................................................................201.000.001.00---------------------
.......................................................................................................................................................CTTTCTTTTTTTTTTTCTTCCAAG...............................................................................241.000.00---1.00------------------
.......................................................................................................................................................CTTTCTTTTTTTTTTTCTTAAG.................................................................................221.000.00--1.00-------------------
..........................................................................................................................................................TCTTTTTTTTTTTCTTCCTTCTTAT...........................................................................251.000.001.00---------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTAGG................................................................................241.000.00-1.00--------------------
...........................................................................................................................................................CTTTTTTTTTTTCTTCCTCG...............................................................................201.000.00---1.00------------------
........................................................................................................................................................TTTCTTTTTTTTTTTCTTCCACG...............................................................................231.000.00--1.00-------------------
...........................................................................................................................................................................................................GAGTTTCTTAGCAGGGCTG................................191.000.00--------1.00-------------
.....................................................................................................................................................TACTTTCTTTTTTTTTTTAACG...................................................................................221.000.00--1.00-------------------
..........................................................................................................................................................TCTTTTTTTTTTTCTTCCTTTAG.............................................................................231.000.00----1.00-----------------
...................................................................................................................................................TGTACTTTCTTTTTTTTTTTCCGAG..................................................................................251.000.00-1.00--------------------
....................................................................................................................................................GTACTTTCTTTTTTTTTTTAG.....................................................................................211.000.00-----1.00----------------
................................................................................................................................................................................................................................GGAGGAAAAGATTTGGGGAT..........201.000.00-----------------1.00----
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCTTG................................................................................2411.001.001.00---------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCCG....................................................................................201.000.001.00---------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTAAG.................................................................................231.000.00---1.00------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTATG..................................................................................221.000.00--1.00-------------------
.......................................................................................................................................................CTTTCTTTTTTTTTTTCTTCAAG................................................................................231.000.00--1.00-------------------
...........................................................................................................AAGAGACAAGGATTTGAAC................................................................................................................................191.000.00------------------1.00---
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCTCC................................................................................2411.001.00-1.00--------------------
.........................................................................................................................................................TTCTTTTTTTTTTTCTTCCTTTGG.............................................................................241.000.001.00---------------------
.....................................................................................................................................................TACTTTCTTTTTTTTTTTCTGCCC.................................................................................241.000.00-1.00--------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTTGG................................................................................241.000.00-1.00--------------------
............................................................................................................................................................TTTTTTTTTTTCTTCCTTCCATC...........................................................................231.000.00-1.00--------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTACC................................................................................241.000.001.00---------------------
..........................................................................................................................................................TCTTTTTTTTTTTCTTCACG................................................................................201.000.00------1.00---------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTC...................................................................................2111.001.001.00---------------------
...........................................................................................................................................................CTTTTTTTTTTTCTTCCTTAAG.............................................................................221.000.00--1.00-------------------
.................................................................................................................................................................................................................................GAGGAAAAGATTTGGCGAC..........191.000.00-------------1.00--------
........................................................................................................................................................TTTCTTTTTTTTTTTCTTCCTCG...............................................................................231.000.00-1.00--------------------
..............................................................................................................................................................TTTTTTTTTCTTCCTTCCAAG...........................................................................211.000.00--1.00-------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCATAG..................................................................................221.000.001.00---------------------
.............................................................................................................................................................TTTTTTTTTTCTTCCTTCAATG...........................................................................221.000.00--1.00-------------------
.........................................................................................................................................................TTCTTTTTTTTTTTCTTCCAGAG..............................................................................231.000.001.00---------------------
.....................................................................................................................................................TACTTTCTTTTTTTTTTTCCTGG..................................................................................231.000.00------1.00---------------
........................................................................................................................................................TTTCTTTTTTTTTTTCTTCCAGG...............................................................................231.000.00-1.00--------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCCGG...................................................................................211.000.001.00---------------------
..................................................................................................................................................................TTTTTCTTCCTTCTCCCTCTG.......................................................................211.000.00-----------1.00----------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCCAG................................................................................241.000.001.00---------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCCTTTTCC............................................................................281.000.001.00---------------------
.....................................................................................................................................................TACTTTCTTTTTTTTTTTCCG....................................................................................211.000.00---1.00------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCTTT................................................................................2411.001.00----1.00-----------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTACT.................................................................................231.000.00----1.00-----------------
.....................................................................................................................................................TACTTTCTTTTTTTTTATAG.....................................................................................201.000.00-----1.00----------------
.....................................................................................................................................................TACTTTCTTTTTTTTTTTCTTTTAG................................................................................251.000.001.00---------------------
.........................................................................................................................................................TTCTTTTTTTTTTTCTTCCTTTAG.............................................................................241.000.001.00---------------------
.................................................................................................................................................ATTGTACTTTCTTTTTTTTTGAG......................................................................................231.000.00-1.00--------------------
.....................................................................................................................................................................................CCCGCTTCACCCCCGCG........................................................171.000.00---------------1.00------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCTAAG...............................................................................2511.001.00--1.00-------------------
..........................................................................................................................................................TCTTTTTTTTTTTCTTCCTCTAG.............................................................................231.000.00---1.00------------------
......................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTGC.................................................................................231.000.001.00---------------------
..............AGGAGAAGTTTTAGT.................................................................................................................................................................................................................................1560.330.33-0.33--------------------
........................................................................................................................................................TTTCTTTTTTTTTTTCTTCCTTGG..............................................................................2490.220.110.22---------------------
........................................................................................................................................................TTTCTTTTTTTTTTTCTTCCTT................................................................................2290.110.110.11---------------------

Antisense strand
AAACATGCTCTTCTAGGAGAAGTTTTAGTAAAAACATAAGAATGCTGCTGGTAAGGAAATCTCTAGGTGATGCCAGGGACTGACAACAGAGGATTTCTGATAGAAGAAAGAGACAAGGATTTGGACCAAGTTTCTGAATGGAATCATTGTACTTTCTTTTTTTTTTTCTTCCTTCTCCCTCCCCGCTTCACCCCCGACCTCTAGAGTTTCTTAGCAGGCATTTTGGAGGAAAAGATTTGGATCAGAAATTCAGA
......................................................................................(((((...)))))...(((((((((((.(((((...((..(((..((((....))))...)))..)).))))).)))))))))))...................................................................................
..........................................................................75..................................................................................................175.............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577589(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
GSM532877(GSM532877)
G691N. (cervix)
.............................................................................................................................................................................................ACTCTAGAGGTCGGGGGT............................................... 1811.001.00---1.00------------------
.....................................................................................................................................................................................................CCTCTAGAGTTTCTTGATC...................................... 191.000.00-1.00--------------------
......................................................................................................................................................................TCTTCCTTCTCCCTCCCCGG.................................................................... 201.000.00----------1.00-----------
.........................................................................................................................................................................TCCTTCTCCCTCCCCGCCT.................................................................. 191.000.00-1.00--------------------
.....................................................................................................AGAAGAAAGAGACAAGCTTT..................................................................................................................................... 201.000.00--------------1.00-------
.............................................................................................CTTGTCTCTTTCTTCTATCAGAAA......................................................................................................................................... 2411.001.00-------------------1.00--
............................................................................................................................................................GAGAAGGAAGAAAAAAAAAAA............................................................................. 2120.500.50--------------------0.50-
............................................................................................................................................................................GAAGCGGGGAGGGAGAA................................................................. 1760.170.17---------------------0.17