| (4) BREAST | (9) CELL-LINE | (1) CERVIX | (1) HELA | (2) LIVER | (1) OTHER | (7) SKIN | (1) XRN.ip |
| GTCAGCCTCAGATGTCACAACCTCTGTGAAGCTCTCCCCAGCTCTCCTAGGTAAAGCTAAATTGCTTCATCTTTGAGGCTCCCACAACACTTGTCTGAATATTTTAAATGTATCATGTTGTAGTGCATTGTAATTGCCTGGTTACAGGACTCTTTCTGGGCTCCTCTTTGGCAGACAAACAAAAAGTCTTATCTATGTATGATAGTTCCAGAGCCTAGCACAGTGCCTGGATAGAGCCTGGAAAGAAGTT ..........................................................................................................(((((((.........)))))))((((((....))))))......................................................................................................... ........................................................................................89......................................................145....................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189785 | SRR037937(GSM510475) 293cand2. (cell line) | SRR189782 | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR330914(SRX091752) tissue: normal skindisease state: normal. (skin) | SRR191590(GSM715700) 48genomic small RNA (size selected RNA from t. (breast) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR191565(GSM715675) 92genomic small RNA (size selected RNA from t. (breast) | SRR040039(GSM532924) G531T. (cervix) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | DRR000559(DRX000317) "THP-1 whole cell RNA, no treatment". (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR191404(GSM715514) 47genomic small RNA (size selected RNA from t. (breast) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR330909(SRX091747) tissue: normal skindisease state: normal. (skin) | SRR038858(GSM458541) MEL202. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................TCTGAATATTTTAAACTGT.......................................................................................................................................... | 19 | 37.00 | 0.00 | 37.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................GTGCATTGTAATTGCATTG............................................................................................................. | 19 | 13.00 | 0.00 | - | 3.00 | 8.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................GTGCATTGTAATTGCATT.............................................................................................................. | 18 | 10.00 | 0.00 | - | 9.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................ATGTATCATGTTGTAGTGC............................................................................................................................ | 19 | 1 | 5.00 | 5.00 | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TTACAGGACTCTTTCGAG........................................................................................... | 18 | 3.00 | 0.00 | - | - | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................TTACAGGACTCTTTCGA............................................................................................ | 17 | 3.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ............................................................................................GTCTGAATATTTTAAACTTT.......................................................................................................................................... | 20 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................GTGCATTGTAATTGCCTTGC............................................................................................................ | 20 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................GATAGAGCCTGGAAAGAAGT. | 20 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTCTGAATATTTTAAACTGT.......................................................................................................................................... | 20 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................TCTGAATATTTTAAACGGG.......................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................CAGGACTCTTTCTGGCAG........................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................GTGCATTGTAATTGCATAA............................................................................................................. | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................CCTAGCACAGTGCCTGGAAGGT............... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .............................................................................................TCTGAATATTTTAAACTC........................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................ACAGTGCCTGGATAGAGCCTGGAAAGAAGTCCC | 33 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................TCTGAATATTTTAAATTGT.......................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................TCTGAATATTTTAAACTGA.......................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................TCTGAATATTTTAAACTTG.......................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................TCTGAATATTTTAAAGTGG.......................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................GTGCATTGTAATTGCCTT.............................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................GGACTCTTTCTGGGCTCCTCTTTG................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TTACAGGACTCTTTCG............................................................................................. | 16 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................CTCTCCCCAGCTCTCGCCC........................................................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................TCTGAATATTTTAAACTAT.......................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................ACACTTGTCTGAATA..................................................................................................................................................... | 15 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - |
| ..............................................................................................................................................TACAGGACTCTTTCT............................................................................................. | 15 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - | - |
| ..............................................................................................................................................TACAGGACTCTTTCTAGGA......................................................................................... | 19 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - |
| ..............................................................................................................................................................................................................TCCAGAGCCTAGCACAGT.......................... | 18 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| GTCAGCCTCAGATGTCACAACCTCTGTGAAGCTCTCCCCAGCTCTCCTAGGTAAAGCTAAATTGCTTCATCTTTGAGGCTCCCACAACACTTGTCTGAATATTTTAAATGTATCATGTTGTAGTGCATTGTAATTGCCTGGTTACAGGACTCTTTCTGGGCTCCTCTTTGGCAGACAAACAAAAAGTCTTATCTATGTATGATAGTTCCAGAGCCTAGCACAGTGCCTGGATAGAGCCTGGAAAGAAGTT ..........................................................................................................(((((((.........)))))))((((((....))))))......................................................................................................... ........................................................................................89......................................................145....................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189785 | SRR037937(GSM510475) 293cand2. (cell line) | SRR189782 | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR330914(SRX091752) tissue: normal skindisease state: normal. (skin) | SRR191590(GSM715700) 48genomic small RNA (size selected RNA from t. (breast) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR191565(GSM715675) 92genomic small RNA (size selected RNA from t. (breast) | SRR040039(GSM532924) G531T. (cervix) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | DRR000559(DRX000317) "THP-1 whole cell RNA, no treatment". (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR191404(GSM715514) 47genomic small RNA (size selected RNA from t. (breast) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR330909(SRX091747) tissue: normal skindisease state: normal. (skin) | SRR038858(GSM458541) MEL202. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................CAAACAAAAAGTCTTACCA........................................................ | 19 | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................CAGGACTCTTTCTGGGCTA....................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................AGCCTGGAAAGAAGTGGG | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................ACCTCTGTGAAGCTCTCCCCAGCTCTCCTCG........................................................................................................................................................................................................ | 31 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................GATAGTTCCAGAGCCCACC............................... | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................GAGCCTAGCACAGTGCCTGGATCGG............... | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................TGATAGTTCCAGAGCCAAAT............................... | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CAGACAAACAAAAAGATC............................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |