ID: uc001bcz.2_intron_1_0_chr1_20442107_r.3p
GENE: (2)
chr1:20442057-20442306-


(8)
B-CELL
(3)
BREAST
(2)
CELL-LINE
(1)
LIVER
(5)
OTHER
(13)
SKIN
(1)
UTERUS

Sense strand
GAGAATGCATAGATAAAGCAAGTGTCTAGTGCATAGGAATCGCTCAAAAAATGTTAGTCATCATGATCCTGAGGAAGACTGCAGCCCTGCAGGCCTTGACTCTTCCCAGGTGGGGACACGGGTTCTTCTCCAGTAGGGGGAGCAGCCAGAGACCCCAGTAGGCTGGGGACCCATGCAGCTGTGCACCCTGTCTGCTCCAGGTGCTGCCAGACCCATGACTGCTGCTATGACCACCTGAAGACCCAGGGGT
...................................................................((((.(((((((((((....)))))........)))))))))).((((((....))))))...........................................................................................................................
..........................................................59......................................................................131.....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189785SRR189782SRR189783SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
............................................................................................................GGTGGGGACACGGGTTCGA...........................................................................................................................1935.000.0028.001.00-------------1.001.00---1.00-1.00--1.00--1.00----
...........................................................................................................AGGTGGGGACACGGGTTCGA...........................................................................................................................20130.004.0025.00--2.00-------1.00---------------1.00-1.00---
............................................................................................................GGTGGGGACACGGGTTCG............................................................................................................................1810.000.009.00-----------------------1.00--------
.............................................................................................................GTGGGGACACGGGTTCGA...........................................................................................................................189.000.003.001.00--2.00---------1.00---1.00----1.00---------
...........................................................................................................AGGTGGGGACACGGGTTCG............................................................................................................................1917.004.006.00-------1.00------------------------
............................................................................................................GGTGGGGACACGGGTTCGATT.........................................................................................................................214.000.003.001.00-------------------------------
...........................................................................................................AGGTGGGGACACGGGTTC.............................................................................................................................1814.004.003.00-1.00------------------------------
..............................................................................................................TGGGGACACGGGTTCGA...........................................................................................................................173.000.001.00------1.00-----------1.00-------------
.............................................................................................................GTGGGGACACGGGTTCGATT.........................................................................................................................202.000.00-2.00-------------------------------
...........................................................................................................AGGTGGGGACACGGGTTCGATT.........................................................................................................................2212.004.002.00--------------------------------
.............................................................................................................GTGGGGACACGGGTTCGAAA.........................................................................................................................202.000.00------1.00----------1.00---------------
............................................................................................................GGTGGGGACACGGGTTTGAT..........................................................................................................................201.000.00-1.00-------------------------------
............................................................................................................GGTGGGGACACGGGTTGATT..........................................................................................................................201.000.001.00--------------------------------
.............................................................................................................GTGGGGACACGGGTTCG............................................................................................................................171.000.00-------------1.00-------------------
..............................................................................................................................................................................................TCTGCTCCAGGTGCTGCCGGG.......................................211.000.00---------1.00-----------------------
.........................................................................................................................................................................................................................ACTGCTGCTATGACCACCTGAAGA.........2411.001.00---------------------1.00-----------
...........................AGTGCATAGGAATCGCAT.............................................................................................................................................................................................................181.000.00------------1.00--------------------
...............................................................................................................................................................................................................CAGACCCATGACTGCTGCTATGACC..................2511.001.00-----1.00---------------------------
.............................................................................................................GTGGGGACACGGGTTCGAT..........................................................................................................................191.000.001.00--------------------------------
..............................................................................................................TGGGGACACGGGTTCGATT.........................................................................................................................191.000.001.00--------------------------------
.............................................................................................................GTGGGGACACGGGTTCAATT.........................................................................................................................201.000.00--1.00------------------------------
.........................................................................................................................GTTCTTCTCCAGTAGTAAC..............................................................................................................191.000.00--------------------------1.00------
................................................................................................................................................................................................................................CTATGACCACCTGAAACT........181.000.00----------1.00----------------------
...............................................................TGATCCTGAGGAAGACTGCAGCCCT..................................................................................................................................................................2511.001.00-----1.00---------------------------
...........................................................................................................AGGTGGGGACACGGGTTCGG...........................................................................................................................2011.004.001.00--------------------------------
............................................................................................................GGTGGGGACACGGGTTCGGGT.........................................................................................................................211.000.00-1.00-------------------------------
..................................................................................................................................CAGTAGGGGGAGCAGC........................................................................................................1620.500.50-------------------------------0.50-
............................................................................................................GGTGGGGACACGGGT...............................................................................................................................1590.220.22--0.22------------------------------
..............................................................................................................................................................................................TCTGCTCCAGGTGCTGC...........................................1750.200.20--------------------------------0.20

Antisense strand
GAGAATGCATAGATAAAGCAAGTGTCTAGTGCATAGGAATCGCTCAAAAAATGTTAGTCATCATGATCCTGAGGAAGACTGCAGCCCTGCAGGCCTTGACTCTTCCCAGGTGGGGACACGGGTTCTTCTCCAGTAGGGGGAGCAGCCAGAGACCCCAGTAGGCTGGGGACCCATGCAGCTGTGCACCCTGTCTGCTCCAGGTGCTGCCAGACCCATGACTGCTGCTATGACCACCTGAAGACCCAGGGGT
...................................................................((((.(((((((((((....)))))........)))))))))).((((((....))))))...........................................................................................................................
..........................................................59......................................................................131.....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189785SRR189782SRR189783SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
............................................................................................................................................................................ATGCAGCTGTGCACCCTCT........................................................... 191.000.00------------------------------1.00--