ID: uc001ato.1_intron_5_0_chr1_12089339_f
GENE: (6)
chr1:12089289-12089871+


(1)
AGO2.ip 		(7)
B-CELL 		(2)
BRAIN 		(3)
BREAST 		(6)
CELL-LINE 		(5)
CERVIX 		(2)
HEART 		(1)
HELA 		(1)
LIVER 		(2)
OTHER 		(17)
SKIN 		(1)
TESTES 		(2)
UTERUS

Sense strand
GCCAGGCCTGCGTGAGAGCAGTGGCAGCGGCGTGGAGGAAGACCATGAATGTGAGTGCGGGCCCTCGGCTAGGCCGCTGAGTAGTCCAGCCTCGCGCTGCCCTGGCCTCCCCTGCCCCAGAGCAGTCCCATTTGAGGTTTGGGGCCTGGGGAGGCCCCTGAGATGTTGAGACTCATGGAGGGAGGCCTGCAGTCTGGACAGGGTGGCCAAGCCCTGGTAGGGGTGGAGTGAGCTAAGGCCTGGCCACCGAATTAGGGGCTGCCCTGTGTGGCACCATCCCACCCTCCCCAGCAGTGCCCCTGTGCTGGTGGGACTCCATCCCAGCTCCTGAGGGCCCCAGGAGGATGTCCCTCCCCACCCCTTAGGGCGTGGGCCCCAGGTTCTGGGAGGAAAGGGGTTAGGAGGAAATGGGCCGAAGGGCTTCCCAGAGGGATTGGCAGCTTGTGTGGTTGGGGGCCGCTGAGGGCAGCACGGAGCCTGGGGACCTGGGTTCCTGGCTCAGGGAGAGCTGTGGCTTCTCATGGGCCTCGCAGGCGTGTACTGTTACCGTGTCAACCGGCGCCTGTTCCCGGTGCCTGTGGAT
.....................................................................................................................................................................................................................................................................................................................................................((((...(((..((((((((...))).)))))((((((((((((........((((.............((((....))))))))..........((.((((..(((((.....)))))...)))).)).))))))))))))....))).))))((((((..((((((....))).))).))))))........................................................
.....................................................................................................................................................................................................................................................................................................................................................342............................................................................................................................................................................................533................................................
SizePerfect hitTotal NormPerfect NormSRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037931(GSM510469)
293GFP. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040037(GSM532922)
G243T. (cervix)		SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		TAX577745(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGTGGCTTCTCATTGA..........................................................1950.000.0029.0016.00---3.00------1.00--1.00-----------------------------------
....................GTGGCAGCGGCGTGGAGGAAGACCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003.00---3.00-----------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................GTCCCTCCCCACCCCGCG...........................................................................................................................................................................................................................183.000.00----1.00---1.00---------------1.00--------------------------
..........................................................................................................................................................................................................................................................................................................................................................GTCCCTCCCCACCCCGCGC..........................................................................................................................................................................................................................192.000.00--------1.00--------1.00---------------------------------
........................................................................................................................................................................................................................................................................................................................................TGAGGGCCCCAGGAGGGACA...........................................................................................................................................................................................................................................202.000.00--2.00------------------------------------------------
.........................................................................................................................................TTTGGGGCCTGGGGAGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.00-----------1.00----------------------1.00----------------
..............................................................................................................................................................................ATGGAGGGAGGCCTGCAGTCTGGACAGGGG...........................................................................................................................................................................................................................................................................................................................................................................................302.000.00----2.00----------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................CTGGGAGGAAAGGGGTGAG......................................................................................................................................................................................191.000.00----------------------------1.00----------------------
........................................................................................................................................................................................................................................CTAAGGCCTGGCCACCGAATTAGG.......................................................................................................................................................................................................................................................................................................................................2411.001.00-----------------------------------1.00---------------
...............................................................................................................................................................................................................................TGGAGTGAGCTAAGGCCTGGC...................................................................................................................................................................................................................................................................................................................................................2111.001.00------------------------------------1.00--------------
.....................................................................................................................................................................................................................................GAGCTAAGGCCTGGCCACC...............................................................................................................................................................................................................................................................................................................................................1911.001.00--------------------1.00------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTACTGTTACCGTGTCAACCGGC.......................2711.001.00-------1.00-------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGTTCCCGGTGCCTGT....1911.001.00----------------------1.00----------------------------
.............................................................................................................................................................................................CAGTCTGGACAGGGTGG.........................................................................................................................................................................................................................................................................................................................................................................................1711.001.00---------------------------1.00-----------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGTTACCGTGTCAACCGG........................2211.001.00-------1.00-------------------------------------------
.......................GCAGCGGCGTGGAGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------1.00-----------------
..........................................................................................................................................................................................CTGCAGTCTGGACAGGG............................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------------1.00-------------------------------------
.............................................................................................................................................................................................................................................................................................CCCCAGCAGTGCCCCTGTGCTGGTGGGAC.............................................................................................................................................................................................................................................................................2911.001.00-----------------------1.00---------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACGGAGCCTGGGGTCA.................................................................................................191.000.00--1.00------------------------------------------------
.................GCAGTGGCAGCGGCGAACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------------1.00--------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTACTGTTACCGTG................................1811.001.00---------------------------------------1.00-----------
.CCAGGCCTGCGTGAGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------1.00---------------------
..................................GAGGAAGACCATGAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1621.001.00------------------1.00--------------------------------
.....................................................................................................................................................................................................................CTGGTAGGGGTGGAGCAGC...............................................................................................................................................................................................................................................................................................................................................................191.000.00----------------1.00----------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCAGCACGGAGCCTGGGGACCCG...............................................................................................261.000.00--1.00------------------------------------------------
.......................GCAGCGGCGTGGAGGAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------1.00-------------------------------
..........................................................................................................................................................................................................................AGGGGTGGAGTGAGCGGG...........................................................................................................................................................................................................................................................................................................................................................181.000.00--------------1.00------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................CAGGTTCTGGGAGGACGAC............................................................................................................................................................................................191.000.00----------------------------------------1.00----------
..............................................................................................................................................................TGAGATGTTGAGACTCATGGAGGGA................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-------------------------------------1.00-------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGGCGTGTACTGTTCTGT..................................211.000.00--------------------------------------1.00------------
.....................................................................................................................................................................................................................................................ACCGAATTAGGGGCTGAA................................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------------1.00------
....................................GGAAGACCATGAATGCGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------------1.00---------
.........................AGCGGCGTGGAGGAAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------------------------1.00-------------------
..........................................................................................................................................................................................................................................................................................................................................................GTCCCTCCCCACCCCGCCC..........................................................................................................................................................................................................................191.000.00------------------------------1.00--------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................GGGGTTAGGAGGAAATGGG...........................................................................................................................................................................1911.001.00---------------------1.00-----------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTGGTTGGGGGCCGCTGAGG......................................................................................................................2411.001.00-------------------------------------------1.00-------
.............................................................................................................................................................................................................................................................................................................................................................................................TCTGGGAGGAAAGGGG..........................................................................................................................................................................................1690.110.11--------------------------------------------------0.11

Antisense strand
GCCAGGCCTGCGTGAGAGCAGTGGCAGCGGCGTGGAGGAAGACCATGAATGTGAGTGCGGGCCCTCGGCTAGGCCGCTGAGTAGTCCAGCCTCGCGCTGCCCTGGCCTCCCCTGCCCCAGAGCAGTCCCATTTGAGGTTTGGGGCCTGGGGAGGCCCCTGAGATGTTGAGACTCATGGAGGGAGGCCTGCAGTCTGGACAGGGTGGCCAAGCCCTGGTAGGGGTGGAGTGAGCTAAGGCCTGGCCACCGAATTAGGGGCTGCCCTGTGTGGCACCATCCCACCCTCCCCAGCAGTGCCCCTGTGCTGGTGGGACTCCATCCCAGCTCCTGAGGGCCCCAGGAGGATGTCCCTCCCCACCCCTTAGGGCGTGGGCCCCAGGTTCTGGGAGGAAAGGGGTTAGGAGGAAATGGGCCGAAGGGCTTCCCAGAGGGATTGGCAGCTTGTGTGGTTGGGGGCCGCTGAGGGCAGCACGGAGCCTGGGGACCTGGGTTCCTGGCTCAGGGAGAGCTGTGGCTTCTCATGGGCCTCGCAGGCGTGTACTGTTACCGTGTCAACCGGCGCCTGTTCCCGGTGCCTGTGGAT
.....................................................................................................................................................................................................................................................................................................................................................((((...(((..((((((((...))).)))))((((((((((((........((((.............((((....))))))))..........((.((((..(((((.....)))))...)))).)).))))))))))))....))).))))((((((..((((((....))).))).))))))........................................................
.....................................................................................................................................................................................................................................................................................................................................................342............................................................................................................................................................................................533................................................
SizePerfect hitTotal NormPerfect NormSRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037931(GSM510469)
293GFP. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040037(GSM532922)
G243T. (cervix)		SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		TAX577745(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
............................................................................................CGCGCTGCCCTGGCCTCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 194.000.00------3.00------------------1.00-------------------------
.CCAGGCCTGCGTGAGATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00--------------------------1.00------------------------
............................................................................................................................................................................................................................................................................................................................................................CCCTCCCCACCCCTTACCAG....................................................................................................................................................................................................................... 201.000.00--1.00------------------------------------------------
...............................................................................................................................................................................................................................................................................................CCAGCAGTGCCCCTGTTGG..................................................................................................................................................................................................................................................................................... 191.000.00--1.00------------------------------------------------
............................................................................................................................................................................................................................................................................................TCCCCAGCAGTGCCCCTCG........................................................................................................................................................................................................................................................................................ 191.000.00---------1.00-----------------------------------------
..........................................................................................................................................................................................................................AGGGGTGGAGTGAGCTGGG.......................................................................................................................................................................................................................................................................................................................................................... 191.000.00--------------------------------1.00------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTTGTGTGGTTGGGAAG.............................................................................................................................. 201.000.00----------1.00----------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCAGGAACCCAGGTCC................................................................................... 1920.500.50---------------------------------------------0.50-----
................................................................................................................................................................................................................................................................................TGGGGAGGGTGGGATGGT..................................................................................................................................................................................................................................................................................................... 1840.500.50---------0.25-------------------------------------0.25---
.............................................................................................................................................................................................................................TTAGCTCACTCCACC........................................................................................................................................................................................................................................................................................................................................................... 1540.250.25----------------------------------------------0.25----
........................................................................................................TCTGGGGCAGGGGAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 1750.200.20------------------------------------------------0.20--
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGAGAAGCCACAG........................................................... 1660.170.17-------------------------------------------------0.17-