ID: uc010ncj.16
GENE: PNPLA7(16)
chr9:140389549-140389798-


(2)
AGO2.ip 		(2)
B-CELL 		(8)
BRAIN 		(6)
BREAST 		(11)
CELL-LINE 		(7)
HEART 		(1)
KIDNEY 		(4)
LIVER 		(2)
OTHER 		(3)
SKIN 		(3)
UTERUS

Sense strand
GCTAGGGGGCACCTTTGGCTTCTGGCATGTTCCAGTGGTTCTGACAGCGTCGCCCGCCAGCACTCACTGACTGCCTCCGCCTTGCGGTGTGGATGGGGTGTCATGTGTGGCTCTGGCAGGCACCGGAGGCTGTCAGGGACAGGTCCAGCTGGCTCGGCCCTCCCAAGCCCGCGGCCCCAGCAGCCGGCTCCTGTCCTCAGGTGGAGACACTGACCCACCAGGCCCGGGCGACCACGGTGCATGCCGTTCG
.................................................................................................................................(((...((((((((...((((((((.((((.............)))).....)))))))))))))))))))..................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577744(Rovira)
total RNA. (breast)		SRR189787SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038854(GSM458537)
MM653. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTCA...................................................22114.0014.002.00-2.004.00--1.001.00----1.00----------1.00---------1.00--------1.00-------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTCAT..................................................2317.0014.00----2.004.00-------------------------------------1.00------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTCAG..................................................2317.007.00----2.00--1.00---1.00------1.00-------1.00-------1.00---------------
..................................................................................................................................................................................AGCAGCCGGCTCCTGTCCTCA...................................................2116.006.00--1.00---2.00-----------------1.00------------1.001.00-----------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTCAGT.................................................2415.007.00-------------------1.00----------1.00-1.00--1.00----1.00---------
..................................................................................................................................................................................AGCAGCCGGCTCCTGTCCTCAGT.................................................234.000.003.00----------------------------------------1.00--------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTC....................................................2112.002.00--1.00----------------------------1.00------------------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCT.....................................................2012.002.00-----------1.00-----------------1.00--------------------
...............................................................................................GGGTGTCATGTGTGGCTCTGGCAG...................................................................................................................................2412.002.00-2.00------------------------------------------------
.....................................................................................................................................CAGGGACAGGTCCAGCTGGCTC...............................................................................................2212.002.00---------------2.00----------------------------------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTCAGA.................................................2411.007.00-------1.00------------------------------------------
..................................................................................................................................................................................AGCAGCCGGCTCCTGTCCTCAT..................................................2211.006.00---------------------------------------------1.00----
........................................................................................GTGGATGGGGTGTCAGAAA...............................................................................................................................................191.000.00---------1.00----------------------------------------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTCAGTCT...............................................2611.007.00-------------1.00------------------------------------
.....................................................................................................................................................................................................................CCCACCAGGCCCGGGA.....................161.000.00--------------1.00-----------------------------------
.........................................................................................................TGTGGCTCTGGCAGGCG................................................................................................................................171.000.00----------1.00---------------------------------------
........................................................................................................................CACCGGAGGCTGTCAG..................................................................................................................1611.001.00-1.00------------------------------------------------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTCT...................................................2211.002.00--------------------1.00-----------------------------
..................................................................................................................................................AGCTGGCTCGGCCCTCT.......................................................................................171.000.00-----------------1.00--------------------------------
................................................................................................................................................................................CCAGCAGCCGGCTCCTGTCCTCA...................................................2311.001.00---------------------------1.00----------------------
..................................................................................................TGTCATGTGTGGCTCTGGCAGGCACCGGAGG.........................................................................................................................3111.001.00-1.00------------------------------------------------
.....................................................................................................................................CAGGGACAGGTCCAGCTGGCTCT..............................................................................................2311.002.00------------1.00-------------------------------------
.................................................................................................GTGTCATGTGTGGCTCTGGCAG...................................................................................................................................2211.001.00----------------1.00---------------------------------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTCAAT.................................................2411.0014.00----------------------------------------------1.00---
..........................................................................................................GTGGCTCTGGCAGGCGT...............................................................................................................................171.000.00----------------1.00---------------------------------
......................................................................................................ATGTGTGGCTCTGGCAGGCAC...............................................................................................................................2111.001.00----------1.00---------------------------------------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTCAGTTTT..............................................2711.007.00----------------------------1.00---------------------
..................................................................................................................................................................................AGCAGCCGGCTCCTGTCCTCAA..................................................2211.006.00--------------------------------------------1.00-----
.................................................................................................GTGTCATGTGTGGCTCTGGCAGA..................................................................................................................................2311.001.00------------------------------------1.00-------------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTCAGTTA...............................................2611.007.00--------1.00-----------------------------------------
..................................................................................................................................................................................AGCAGCCGGCTCCTGTCCTCCGTT................................................241.000.00-----------------------------------------------1.00--
..............................................................................................................................................................................CCCCAGCAGCCGGCTCCTGTCCT.....................................................2311.001.00-------------------------1.00------------------------
..................................................................................................................................................................................AGCAGCCGGCTCCTGTCCTCAGCAT...............................................251.000.00---------------------1.00----------------------------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCC......................................................1911.001.00--------1.00-----------------------------------------
..................................................................................................................................................................................AGCAGCCGGCTCCTGTCCTCC...................................................211.000.00------1.00-------------------------------------------
.................................................................................................................................................................................CAGCAGCCGGCTCCTGTCCTCTT..................................................2311.002.00-------------1.00------------------------------------
.........................................................................................................................................................................................................................CCAGGCCCGGGCGA...................1460.170.17------------------------------------------------0.17-
..................................................................CTGACTGCCTCCGC..........................................................................................................................................................................1480.120.12-------------------------------------------------0.12

Antisense strand
GCTAGGGGGCACCTTTGGCTTCTGGCATGTTCCAGTGGTTCTGACAGCGTCGCCCGCCAGCACTCACTGACTGCCTCCGCCTTGCGGTGTGGATGGGGTGTCATGTGTGGCTCTGGCAGGCACCGGAGGCTGTCAGGGACAGGTCCAGCTGGCTCGGCCCTCCCAAGCCCGCGGCCCCAGCAGCCGGCTCCTGTCCTCAGGTGGAGACACTGACCCACCAGGCCCGGGCGACCACGGTGCATGCCGTTCG
.................................................................................................................................(((...((((((((...((((((((.((((.............)))).....)))))))))))))))))))..................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577744(Rovira)
total RNA. (breast)		SRR189787SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038854(GSM458537)
MM653. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
...............................................................................................................................................................................................................CACTGACCCACCAGGCGTA........................ 191.000.00---------1.00----------------------------------------
............................................................................................................................................................GCCCTCCCAAGCCCGCATC........................................................................... 191.000.00----------------------1.00---------------------------
..............................................................................................................................................................................CCCCAGCAGCCGGCTAGCC......................................................... 191.000.00--------------1.00-----------------------------------
............................................................................................................................................................GCCCTCCCAAGCCCGCGAA........................................................................... 191.000.00---------------------------------------1.00----------