ID: hsa-mir-6880
GENE: NCOR2(8)
chr12:124821677-124821926-


(1)
AGO1.ip 		(3)
AGO2.ip 		(1)
AGO3.ip 		(5)
B-CELL 		(2)
BRAIN 		(24)
BREAST 		(34)
CELL-LINE 		(7)
CERVIX 		(2)
FIBROBLAST 		(8)
HEART 		(2)
HELA 		(12)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(37)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
TGCAAGGAATGAATGAACGAATGAGTGGGATGGGTCAAACCATGACGCACAGAGTCTGGCAGGTTACAGTCAGGAGGGCAGTTTCACTCTGGGAGCAGCAGGGGATGTGGATTTATCCCAGGGCAATGGGGACTCATCGAGGGTGGTGGAGGAAGAGGGCAGCTCCCATGACTGCCTGACCGCCTTCTCTCCTCCCCCAGGTCCACCTCCACCTCCTCACCCGTTCGCCCGGCTGCCACATTCCCACCTG
............................................................................................................................................(((.((.((((((((.((((((.((....))))))))......)))).)))).)))))....................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR029129(GSM416758)
SW480. (cell line)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040011(GSM532896)
G529T. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783TAX577744(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029128(GSM416757)
H520. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577579(Rovira)
total RNA. (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR040034(GSM532919)
G001N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040016(GSM532901)
G645N. (cervix)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040020(GSM532905)
G699N_2. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR040035(GSM532920)
G001T. (cervix)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191499(GSM715609)
6genomic small RNA (size selected RNA from to. (breast)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577745(Rovira)
total RNA. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR343334SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343335SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCAGT.................................................22124.0013.00-1.001.002.00-----1.00------------2.00-----1.00----2.00--2.00--------------1.00----------------------1.001.00---1.00-----------1.00----1.001.00---1.00---------1.00--1.00-1.00---1.00----------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCAGA.................................................22124.0013.00-1.00----------------------2.00-------1.00-----1.001.002.00----1.00----------------1.00-----1.00---1.00-----1.00----1.00---1.001.001.001.00--1.00-1.00---1.001.00-----1.00----------1.00-------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCAG..................................................21113.0013.00--3.00----2.00-----------2.001.00---------2.00-------------------------1.00------1.00----------------------------------------1.00--------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTC.....................................................................................2217.007.001.00-----------1.00----------------------------------------------------------1.00-----1.00--------1.00----------------------1.00-----------1.00---------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCT......................................................................................2124.004.001.501.00---------------0.50-------------------------------0.500.50--------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCA....................................................................................2314.007.001.00-------------------------------1.00--1.00----------------------------1.00------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCAGAAA...............................................2413.0013.00-----------3.00-----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCAGA..................................................................................2513.007.00--------------3.00--------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCAA...................................................................................2413.007.001.00-----1.00------------------------------------------1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAG........................................................................................1922.502.50------------0.50-------0.500.50-------------------------0.50-----------------------------------------------------------------------------0.50-----------------
..................................................................................................................................................................................ACCGCCTTCTCTCCTCCCCCAGA.................................................2312.001.00------------------------------------------2.00----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCCGA.................................................222.000.00-------------------------------------------------------------------------------------1.00---------------------------------1.00-----------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGCTC.....................................................................................2312.002.00-1.00----1.00----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGCTAT....................................................................................2412.002.00---1.00----------------------------------------------1.00--------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGC.......................................................................................2022.002.00---1.00---------------0.50-----------------------------------------------------------------------------------------------------------0.50---------------
.................................................................................................................................................GTGGAGGAAGAGGGCAGCTC.....................................................................................2012.002.00----------------------------------1.00------------1.00-----------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTT.....................................................................................2222.004.00-------------------------------------1.00----------------------------------------------------------------------1.00----------------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCAGTA................................................2312.0013.00----------1.00----------------------------1.00-------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................CCCGTTCGCCCGGCTGC..............1712.002.00---------2.00-------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGCTT.....................................................................................2312.002.00-2.00---------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGCTA.....................................................................................2312.002.00------------------1.00-----------------------------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGCT......................................................................................2212.002.00---------------------------------------------------------1.00-1.00-----------------------------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGTAA........................................................................................202.000.00---------------------------2.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCAGAA................................................2312.0013.00-----------------------------1.00-------------------------------------------------------------------------1.00---------------------------------------
........ATGAATGAACGAATGAGTGGGATGG.........................................................................................................................................................................................................................2511.001.00----------------------------------1.00------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCT....................................................................................2311.007.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTA.....................................................................................2221.004.00------0.50-----0.50----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCAT...................................................................................2411.007.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCAT..................................................2111.001.00----------1.00------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................ACCGCCTTCTCTCCTCCCCCAGT.................................................2311.001.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGCTCA....................................................................................2411.002.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTAGA...................................................................................2421.004.00----------------------------------------------1.00------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCCGT.................................................221.000.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCATTT.................................................................................2611.007.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCTGA..................................................................................2511.007.00------------1.00----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCA.........................................................................................1831.001.00----------------------------------------------------------------------------------------------------------------------------0.67---------0.33--------
...........AATGAACGAATGAGTGGGATGGGTC......................................................................................................................................................................................................................2511.001.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------
..........................................................................AGGGCAGTTTCACTCTGGGAGCAGCAG.....................................................................................................................................................2711.001.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------
........ATGAATGAACGAATGAGATT..............................................................................................................................................................................................................................201.000.00----------------------------------------------------------------------------------------------------------------1.00------------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCCGC.................................................221.000.00----------------------------1.00------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................CTTCTCTCCTCCCCCCCTG................................................191.000.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGC.......................................................................................2111.001.00-----------------------------------------------------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................AGGGTGGTGGAGGAAGAGGG...........................................................................................2011.001.00------------------1.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTAT....................................................................................2321.004.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................CCCCCAGGTCCACCTCCACCTCCT.................................2411.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCAAAA.................................................................................2611.007.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCTAAT.................................................................................2611.007.001.00----------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCTA...................................................................................2411.007.00-----------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCGTA...................................................201.000.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................TGGAGGAAGAGGGCAGCTCCCAT.................................................................................2311.001.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGCTAAT...................................................................................2511.002.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................TCCTCCCCCAGGTCCACCTCCACCTCCT.................................2811.001.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCTATT.................................................................................2611.007.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCAAA..................................................................................2511.007.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTCC....................................................................................2311.001.00-------------------------------------------------------------------------1.00---------------------------------------------------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCAA..................................................2111.001.00----------------------------------------------------------------------1.00------------------------------------------------------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCAGAAT...............................................2411.0013.00---------------------------------------------------------------------1.00-------------------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGCTAA....................................................................................2411.002.00------------------------------------------------------------------------------------1.00----------------------------------------------------------
.............................................................................................................................................GGTGGTGGAGGAAGAGGGCAGCTCT....................................................................................251.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCA.........................................................................................1911.001.00---------------------------------------------------------------------------------------------------------------------------1.00-------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGCCGAA...................................................................................2511.001.00-----------------------------------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................CACTCTGGGAGCAGCAGGGGA.................................................................................................................................................2111.001.00---------------------------------------------------------------------------------1.00-------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAG........................................................................................2011.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................GAGCAGCAGGGGATGTAAT...........................................................................................................................................191.000.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
............................................................................................GAGCAGCAGGGGATGTAGGG..........................................................................................................................................201.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGCTCT....................................................................................2411.002.001.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CGCCTTCTCTCCTCCCGTA...................................................191.000.00-------------------------------------------------------------1.00---------------------------------------------------------------------------------
....................................................................................................................................................................................CGCCTTCTCTCCTCCCCCAGA.................................................211.000.00-----------------------------------------------------------------------------------------------------------1.00-----------------------------------
.................................................................................................................................................................................GACCGCCTTCTCTCCTCCCCCA...................................................2211.001.00-------------------------------------1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTAA....................................................................................2321.004.00----------------------------------------------0.50-------------------------------------------------------------------------------0.50----------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAAA.......................................................................................2111.001.00--------------------------------------------------------------------------------------------------1.00--------------------------------------------
...................................................................................................................................................................................CCGCCTTCTCTCCTCCCCCA...................................................2011.001.00----------------------------------------------------1.00------------------------------------------------------------------------------------------
................................................................................GTTTCACTCTGGGAGCAGCAGGG...................................................................................................................................................2311.001.00--------------------------------------------------------------------------------------------------------------1.00--------------------------------
..................................................................................................................................................................................ACCGCCTTCTCTCCTCCCCCAG..................................................2211.001.00------------------------------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................................................TATCCCAGGGCAATGGGGACTCATCGAGGGTGGTGGAGGAAGAGGGCAGCTCCCATGACTGCCTGACCGCCTTCTC.............................................................7611.001.00----------------------------------------------------------------------------------------------------------------------1.00------------------------
..............................................................................................................................................GTGGTGGAGGAAGAGGGCAGCTCTT...................................................................................2511.002.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GCCTTCTCTCCTCCCCCAGA.................................................201.000.00----------1.00------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTATAA..................................................................................2520.504.00---0.50-------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGA.......................................................................................2020.502.50------0.50----------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCATT....................................................................................2320.502.00------------------0.50----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCAA.....................................................................................2220.502.00--------------------------------------------------------------------------------0.50--------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGT.......................................................................................2020.502.50---------------------------------------------------------------------------------------------------------------------------------0.50-------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCTAAAT..................................................................................2520.504.00------------------------------------------------0.50----------------------------------------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGAT......................................................................................2120.502.50--------------------------------------------------------------------------------------------------------------------------------0.50--------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGCAAA....................................................................................2320.502.00----------------------------------------------------------------------------------------------------------------------------------0.50------------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAGAAA.....................................................................................2220.502.50--------------------------------------------------------------------------------0.50--------------------------------------------------------------
...............................................................................................................................................TGGTGGAGGAAGAGGGC..........................................................................................1750.400.40---------------------------------------------------0.20-----------------------------------------------------------------------------------------0.20-
...............................................................................................................................................TGGTGGAGGAAGAGGGCAAAA......................................................................................2130.331.00---------------------------------------------------------------------------------------------------------------------------------------0.33-------
...............................................................................................................................................TGGTGGAGGAAGAGGGCAA........................................................................................1930.331.00-----------------------0.33-----------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TCCCCCAGGTCCACCTC.........................................1740.250.25---------0.25-------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................ACCGCCTTCTCTCCTCC.......................................................1740.250.25--------0.25--------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GTTCGCCCGGCT................1250.200.20----------------------------------------------------------------------------------------------------------------------------0.20------------------
.....................................................................................ACTCTGGGAGCAGCAG.....................................................................................................................................................1690.110.11----------------------------------------------------------------------------------------------------------------------------------------------0.11

Antisense strand
TGCAAGGAATGAATGAACGAATGAGTGGGATGGGTCAAACCATGACGCACAGAGTCTGGCAGGTTACAGTCAGGAGGGCAGTTTCACTCTGGGAGCAGCAGGGGATGTGGATTTATCCCAGGGCAATGGGGACTCATCGAGGGTGGTGGAGGAAGAGGGCAGCTCCCATGACTGCCTGACCGCCTTCTCTCCTCCCCCAGGTCCACCTCCACCTCCTCACCCGTTCGCCCGGCTGCCACATTCCCACCTG
............................................................................................................................................(((.((.((((((((.((((((.((....))))))))......)))).)))).)))))....................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR029129(GSM416758)
SW480. (cell line)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040011(GSM532896)
G529T. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783TAX577744(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029128(GSM416757)
H520. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577579(Rovira)
total RNA. (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR040034(GSM532919)
G001N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040016(GSM532901)
G645N. (cervix)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040020(GSM532905)
G699N_2. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR040035(GSM532920)
G001T. (cervix)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191499(GSM715609)
6genomic small RNA (size selected RNA from to. (breast)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577745(Rovira)
total RNA. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR343334SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343335SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.................................................................................................................................................................................GACCGCCTTCTCTCCTGAG...................................................... 1911.000.00----1.001.00---------1.001.001.00-----1.00-------------------2.00---------------------1.00------------------------------------1.00--1.00-------------------------------------
.................................................................................................................................................................................GACCGCCTTCTCTCCTGA....................................................... 188.000.00----2.001.001.00--------1.002.00--------------------------------------------------------------------------------------------------1.00---------------------------
........................................................................................................................................................................................................................TCACCCGTTCGCC..................... 1334.004.00--------1.33-------------0.33----------------------0.67-------------------------------------------------------------------------------------0.33-0.33--0.330.330.33----
......................................................................................................................................................................................................................................GGCTGCCACATTCCCATTT. 192.000.00-----------------------------------------2.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TGCCACATTCCCACCTTTAA 201.000.00--------------------------------------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TCCTCACCCGTTCGCCATA.................. 191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GCCTTCTCTCCTCCCCCAGGTC............................................... 2211.001.00----------------------------------------------------------------------------------------------1.00------------------------------------------------
..........................................................................................................................................................................................................CCACCTCCACCTCCT................................. 1501.001.00--------------------------------------------------------------------------------------------1.00--------------------------------------------------
....................................................................................................................................................................CCCATGACTGCCTGACGC.................................................................... 181.000.00----------------------------------------------------------------------------------1.00------------------------------------------------------------
.......................................................................................................................................................................................................................CTCACCCGTTCGCC..................... 1411.001.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TCCACCTCCACCTCCTCTTT............................. 201.000.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................GACCGCCTTCTCTCCCCC....................................................... 181.000.00-------------------------------------------------------------------1.00---------------------------------------------------------------------------
.............................................................................................................................................................................................TCCTCCCCCAGGTCCACACC......................................... 201.000.00----------------------------------------------------------------------------1.00------------------------------------------------------------------
..........................................................................................................................................................................................................CCACCTCCACCTCCTCCAAG............................ 201.000.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CCACCTCCACCTCCTCCGGA............................ 201.000.00-----------------------------------------------------------------------------------------------------------------1.00-----------------------------
.....................................................................................................................................................................................GCCTTCTCTCCTCCCCCAGG................................................. 2011.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................CTTCTCTCCTCCCCCACC................................................. 181.000.00------------------------------------------------------1.00----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TCCACCTCCACCTCCTCTGA............................. 201.000.00----1.00------------------------------------------------------------------------------------------------------------------------------------------
................................................................TACAGTCAGGAGGGCGT......................................................................................................................................................................... 171.000.00--------------------------------------------------------------------------------------------------------------------------1.00--------------------
.........................................................................................................................................................................................................TCCACCTCCACCTCCTTGC.............................. 191.000.00------------------------------------------------------------------1.00----------------------------------------------------------------------------
.....................................................................................................................................................................................GCCTTCTCTCCTCCCCCAGGT................................................ 2111.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................GACCGCCTTCTCTCCTGGG...................................................... 191.000.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................GACCGCCTTCTCTCCTGTG...................................................... 191.000.00----------------------------------------------------------1.00------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GTTCGCCCGGCTG............... 1330.670.67--0.67--------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CTCACCCGTTCG....................... 1250.400.40-------------------------------------------------------------------------------------------------------------------------------------------0.200.20--
.....................................................................................................................................................................................GCCTTCTCTCCTCCCCC.................................................... 1730.330.33------------------------------------------------------------------------------------------------------------------------------------0.33----------