hsa-mir-1238

ACTACTGCCAGCCCACTGTGGATGTCAGCCAGGCCGACTTCCCCCTGGAGGTGAGTGGGAGCCCCAGTGTGTGGTTGGGGCCATGGCGGGTGGGCAGCCCAGCCTCTGAGCCTTCCTCGTCTGTCTGCCCCAGTCCTTCCACTGCACCTCGCCCCGCAAGATGGCCTTTGCCAAGATGGACCC
.......................................................((((.((..(((((...((...((((((.(((((((.....)))).)))..)).)))).)).)).)))...))))))...................................................
..................................................51................................................................................133................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)

GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)

SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR040012(GSM532897)
G648N. (cervix)

SRR189786

SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)

SRR033728(GSM497073)
MALT (MALT413). (B cell)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)

SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

TAX577742(Rovira)
total RNA. (breast)

SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)

DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)

SRR553576(SRX182782)
source: Testis. (testes)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

SRR189787

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR189784

SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)

SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR038852(GSM458535)
QF1160MB. (cell line)

SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)

SRR343335

..............................................................................................................CCTTCCTCGTCTGTCTGCCCCAGT.................................................

5.00

4.00

1.00

..............................................................................................................CCTTCCTCGTCTGTCTGCCCCT...................................................

5.00

0.00

5.00

...............................................................................................................CTTCCTCGTCTGTCTGCCCCAGT.................................................

4.00

2.00

1.00

..............................................................................................................CCTTCCTCGTCTGTCTGCCCCAG..................................................

4.00

1.00

2.00

1.00

.............CACTGTGGATGTCAGCCAGGCCG...................................................................................................................................................

3.00

1.00

..............................................................................................................CCTTCCTCGTCTGTCTGCCCCA...................................................

3.00

2.00

1.00

..............................................................................................................CCTTCCTCGTCTGTCTGCCCCAGTT................................................

2.00

5.00

1.00

..............................................................................................................CCTTCCTCGTCTGTCTGCCCCAGC.................................................

2.00

4.00

1.00

.............CACTGTGGATGTCAGCCAGGCC....................................................................................................................................................

2.00

1.00

................................................................................................................TTCCTCGTCTGTCTGCCCCAAAG................................................

1.00

0.00

1.00

...............................................................................................AGCCCAGCCTCTGAGCCGGCA...................................................................

1.00

0.00

1.00

.............CACTGTGGATGTCAGCCAGGC.....................................................................................................................................................

1.00

........................................................................................................................................................CCCGCAAGATGGCCTTTGCC...........

1.00

...............................................................................................................CTTCCTCGTCTGTCTGCCCCAT..................................................

1.00

0.00

1.00

...ACTGCCAGCCCACTGTGGATGTC.............................................................................................................................................................

1.00

.......................................................................................GGGTGGGCAGCCCAGGCG..............................................................................

1.00

0.00

1.00

...........CCCACTGTGGATGTCAGCCAG.......................................................................................................................................................

1.00

.............CACTGTGGATGTCAGGCAG.......................................................................................................................................................

1.00

0.00

1.00

................................................................................................................TTCCTCGTCTGTCTGCCCCAGTTAT..............................................

1.00

0.00

1.00

................................................................................................................TTCCTCGTCTGTCTGCCCCAAATT...............................................

1.00

0.00

1.00

................................................................................................................................................CACCTCGCCCCGCAAGATGGC..................

1.00

..............................................................................................................................................TGCACCTCGCCCCGCAAGATGGCCTTCGCC...........

1.00

0.00

1.00

..................................................GTGAGTGGGAGCCCCAGTGTGTGGTTGGGGCCATGGCGGGTGGGCAGCCCAGCCTCTGAGCCTTCCTCGTCTGTCTGC.......................................................

1.00

..........................................................................TTGGGGCCATGGCGGGGGG..........................................................................................

1.00

0.00

1.00

.........................................................................................................................................TCCACTGCACCTCGCCCCGCAAGATGGCC.................

1.00

.............CACTGTGGATGTCAGCCAG.......................................................................................................................................................

1.00

..............ACTGTGGATGTCAGCCAGGCCG...................................................................................................................................................

1.00

.......CCAGCCCACTGTGGAGGC..............................................................................................................................................................

1.00

0.00

1.00

..........................................................................TTGGGGCCATGGCGGGTGGGC........................................................................................

1.00

...................................................................................................................................................................GCCTTTGCCAAGATGGA...

1.00

.............CACTGTGGATGTCAGCCAGGCCGA..................................................................................................................................................

1.00

..................................................GTGAGTGGGAGCCCCAGTGTGTG..............................................................................................................

1.00

.............CACTGTGGATGTCAGCCA........................................................................................................................................................

0.50

ACTACTGCCAGCCCACTGTGGATGTCAGCCAGGCCGACTTCCCCCTGGAGGTGAGTGGGAGCCCCAGTGTGTGGTTGGGGCCATGGCGGGTGGGCAGCCCAGCCTCTGAGCCTTCCTCGTCTGTCTGCCCCAGTCCTTCCACTGCACCTCGCCCCGCAAGATGGCCTTTGCCAAGATGGACCC .......................................................((((.((..(((((...((...((((((.(((((((.....)))).)))..)).)))).)).)).)))...))))))................................................... ..................................................51................................................................................133................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line)	SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line)	SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex)	RoviraIPAgo2(Rovira) total RNA. (ago2 breast)	SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line)	SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver)	SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR207116(GSM721078) Nuclear RNA. (cell line)	SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin)	SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line)	GSM450610(GSM450610) miRNA sequencing raw reads from post-mortem s. (brain)	SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin)	SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart)	SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell)	GSM1105749AGO2(GSM1105749) small RNA sequencing data. (ago2 hela)	SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin)	DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela)	SRR040012(GSM532897) G648N. (cervix)	SRR189786	SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin)	SRR033728(GSM497073) MALT (MALT413). (B cell)	SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin)	SRR207118(GSM721080) RRP40 knockdown. (RRP40 cell line)	DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR095854(SRX039177) "miRNA were isolated from FirstChoice Human B. (brain)	SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	TAX577742(Rovira) total RNA. (breast)	SRR330881(SRX091719) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR033711(GSM497056) GCB DLBCL (GCB110). (B cell)	DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela)	SRR553576(SRX182782) source: Testis. (testes)	SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin)	SRR189787	SRR207110(GSM721072) Nuclear RNA. (cell line)	SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart)	SRR060986(GSM569190) Human memory B cell [09-001]. (cell line)	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	SRR189784	SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin)	SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin)	SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	SRR038852(GSM458535) QF1160MB. (cell line)	SRR033725(GSM497070) Unmutated CLL (CLLU626). (B cell)	SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell)	SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin)	SRR343335
................................GCCGACTTCCCCCTGGAGG....................................................................................................................................	19	1	2.00	2.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................TGTCTGCCCCAGTCCTT.............................................	17	2	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................CTGCACCTCGCCCCGCAGAG......................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................GCCTTTGCCAAGATGGAC..	18	1	1.00	1.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................CCTTCCACTGCACCTCGC...............................	18	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
............................CCAGGCCGACTTCCCCCTGGAGG....................................................................................................................................	23	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................TCGTCTGTCTGCCCCAGTCCTTCCACTA.......................................	28		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................GGGGCCATGGCGGGTGTCT........................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................GCCGACTTCCCCCTGGAGGTG..................................................................................................................................	21	1	1.00	1.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.CTACTGCCAGCCCACTGTG...................................................................................................................................................................	19	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......CCAGCCCACTGTGGATC...............................................................................................................................................................	17		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................GCCGACTTCCCCCTGGA......................................................................................................................................	17	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.........................CAGCCAGGCCGACTTCGCA...........................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
....CTGCCAGCCCACTGTGCC.................................................................................................................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................TCTGCCCCAGTCCTTCCAC.........................................	19	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................GCCGACTTCCCCCTG........................................................................................................................................	15	4	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	0.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.25	-
..........................................................................................................................................................CGCAAGATGGCCTT...............	14	4	0.25	0.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.25
.............................................................................................................................TGCCCCAGTCCTTCCA..........................................	16	7	0.14	0.14	-	-	0.14	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-