ID: hsa-mir-1236
GENE: RDBP(7)
chr6:31924566-31924767-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(5)
AGO2.ip 		(8)
B-CELL 		(5)
BRAIN 		(13)
BREAST 		(45)
CELL-LINE 		(7)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(9)
HELA 		(8)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(28)
SKIN 		(1)
TESTES 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
GAAGAAGCAAAGTAGCAGCAGCACAACCAGCCAAGGTGGTGTCAAACGCTGTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCCAGCACTATCAGAGCAGCCTGTCATGGACACAGCCACAGCAACAGAGCAGGCA
....................................................(((.((((((((((..((.(((((.........(((((((.....)))).)))))))).((((...))))........))..))))))).))).))).....................................................
..................................................51...................................................................................................152................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR189786SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189787SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189784RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR038857(GSM458540)
D20. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189783SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040028(GSM532913)
G026N. (cervix)		SRR029132(GSM416761)
MB-MDA231. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		GSM359178(GSM359178)
hela_nucl_t. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR040031(GSM532916)
G013T. (cervix)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038858(GSM458541)
MEL202. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM532889(GSM532889)
G576N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577453(Rovira)
total RNA. (breast)		SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040038(GSM532923)
G531N. (cervix)		GSM956925PAZD5SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		TAX577579(Rovira)
total RNA. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029130(GSM416759)
DLD2. (cell line)		SRR040027(GSM532912)
G220T. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029128(GSM416757)
H520. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
...................................................TGAGTGACAGGGGAAATGGGGA.................................................................................................................................22152.0052.0041.00---5.00----2.00--------------------------------2.00-----------1.00-----------------------------------------------------------------------------1.00--------
..................................................GTGAGTGACAGGGGAAATGG....................................................................................................................................20141.0041.00--4.00-1.00----1.002.0010.0011.00---1.00-----2.00--1.00-----1.001.001.00-------------------1.00-----------------------1.00--------------------------------------------1.00-----1.001.00-----------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGT.................................................21129.008.005.00-3.00--4.00--2.001.00--------2.001.00--------------3.00----------2.00------1.00----------------------1.00----------1.00--------------1.00---------1.00---------------1.00-------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGA.................................................21128.008.001.00-2.00-1.006.00--1.001.00---------3.00-2.00-------1.00-----------------1.001.00--1.00---1.001.00------------1.00--------------------1.00------1.00----------------------1.00-----1.00--------------
...................................................TGAGTGACAGGGGAAATGGGGAT................................................................................................................................23120.0020.0015.00---1.00----1.00---------------------------------1.00-----------------------------------1.00--------------------1.00----------------------------------------
..................................................GTGAGTGACAGGGGAAATGGG...................................................................................................................................21120.0020.00--11.00-------------------------1.00----------1.00---------2.00--------1.00----1.00--------------------1.00---------1.00-----------------1.00----------------------------
..................................................GTGAGTGACAGGGGAAATGGGG..................................................................................................................................22119.0019.001.00------15.00-1.00------1.00---------------------1.00------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGG..................................................................................................................................21116.0016.005.00---4.00----1.00-1.00-----4.00-------1.00-------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGACGG..............................................................................................................................25116.0052.00------9.00-7.00------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGG...................................................................................................................................20115.0015.005.00--2.004.00----1.00---------------1.00------------1.00-----------------------------------------1.00------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGAA................................................................................................................................23112.0052.008.00--1.00-----1.00------------------------------------------------------------------------------1.00----------1.00-----------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGA..................................................................................................................................2219.0020.00--4.00-1.00-------------2.00-----------------------------------------------1.00-------------------------------------------------1.00------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTC.........................................................9519.009.00-8.00-----------------------------------------------------------------------------------------------------------------------1.00-------------------
.......................................................................GATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCT.....................................................................6219.009.00-9.00-------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGC..................................................................................7018.008.00-8.00-------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAG..................................................2018.008.00-----7.00-------------------------------------------------------1.00-------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGA.................................................................................................................................2318.008.003.00---1.001.00--------1.00---------------1.00---------------------------------------------------------------------------------------------1.00----------------
...................................................TGAGTGACAGGGGAAATGG....................................................................................................................................1918.008.00-------------------------1.00-------1.00-----------------1.00-1.00-1.001.00------------------------------------1.00-----------------------------1.00-----------------
...................................................TGAGTGACAGGGGAAATGGGGACG...............................................................................................................................2418.0052.00------4.00-3.00-----1.00------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATG.....................................................................................................................................1817.007.00---2.00------1.00---1.00-1.00---------------------------1.00--------------------------------------------1.00---------------------------------------------------
.........................................................................TGGACTGGAAGTGGGCAGC..............................................................................................................1917.007.00---6.00--------------------------------------------------------1.00--------------------------------------------------------------------------------
.............................................................................................................................................................................TGGACACAGCCACAGCAACAGAGCAGG..2716.006.00-------------4.00-----------------------------------------------------1.00-------------------1.00-----------------------------------------------------
..................................................................................................................................CCTCTTCCCCTTGTCTCTCCAGA.................................................2315.003.00--------------------------------------------------1.00-----------------1.00---1.00--------------------------------------------1.00------------1.00----------
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCT........................................................9615.005.00-5.00-------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGATGGACTGGAAGTGGGCA................................................................................................................2115.005.00---------------------------4.00-------------------------------------------------------------------1.00---------------------------------------------
..................................................GTGAGTGACAGGGGAAATGA....................................................................................................................................2015.003.00--3.00-------1.00--------------------------------------------------------------------------1.00-------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATAAT.............................................................................................................................2614.0020.004.00--------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGG..............................................................................................................................2614.004.00------------------------1.00---------------------2.00-----------------1.00----------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAACG.....................................................................................................................................184.000.00--------------4.00------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CCTCTTCCCCTTGTCTCTCCAGT.................................................2314.003.00--------------------2.00-----------------------------------------------------1.00-----------------------------1.00------------------------------------
...................................................TGAGTGACAGGGGAAAT......................................................................................................................................1714.004.004.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGA....................................................................................................................................1913.007.00------------------------------------2.00------------------------------------1.00-------------------------------------------------------------------
...............................................................................................................................................................AGAGCAGCCTGTCATGGACACA.....................2213.003.00------------------------------2.00----------------------------------------------------------------------------------1.00---------------------------
...................................................TGAGTGACAGGGGAAATGGAA..................................................................................................................................2113.008.00---3.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATAAT...................................................................................................................................2113.003.00--------------------------3.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CCTCTTCCCCTTGTCTCTCCAG..................................................2213.003.00---------------3.00-----------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGA..................................................................................................................................2113.0015.00--1.00------1.00-------------------------------1.00---------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATT...............................................................................................................................2513.002.003.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATT...............................................................................................................................2413.0020.00----------2.00-----1.00----------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATG.....................................................................................................................................1913.003.00----------2.00--------------------1.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTCTTCCCCTTGTCTCTCCAGT.................................................223.000.00------------------1.00----------------2.00---------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGAAA...............................................................................................................................2413.0052.00------3.00--------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTCTTCCCCTTGTCTCTCCAGA.................................................223.000.00-------------------1.00---------------------------------------------------------------1.00--------1.00------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATG...............................................................................................................................2513.003.003.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATA...............................................................................................................................2413.0020.00---2.00------------1.00----------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAAT......................................................................................................................................1813.003.00-----------------------------------------------------------1.00---------------------------------------------1.00---1.00-------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATGGA.............................................................................................................................2612.002.00----1.00------------------1.00---------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGT..................................................................................................................................2212.0020.00-------1.00--------------------1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................AGCAGCCTGTCATGGACACA.....................2012.002.00--------------------------------1.00-------1.00----------------------------------------------------------------------------------------------------
...........................................................................GACTGGAAGTGGGCAGCATGGAGCTG.....................................................................................................2612.002.00----------2.00----------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATA.....................................................................................................................................1812.004.00---2.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATCA..............................................................................................................................2512.0020.002.00--------------------------------------------------------------------------------------------------------------------------------------------
......................................................................GGATGGACTGGAAGTGGGCA................................................................................................................2012.002.00----------------------2.00----------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGAT................................................................................................................................2412.002.00----1.00------------------------------------------------------------------1.00---------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATG...............................................................................................................................2412.002.00-----1.00---------------1.00-----------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATA.....................................................................................................................................1912.003.00-----------------------------2.00---------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGT..................................................................................................................................2112.0015.00---1.00----------------1.00------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................CTTCCCCTTGTCTCTCCAT..................................................192.000.00--------------1.00-------------------------------------------------------1.00----------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGAAT...............................................................................................................................2412.0052.00---1.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------
.........................................................................TGGACTGGAAGTGGGCAG...............................................................................................................1821.501.50------------------------------------------------------------------------------------------------------1.00--------------------------------0.50-----
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGTA................................................2211.008.00------------------------------------------------------------------------------------------------------------------1.00--------------------------
...............................................................................................................................................................AGAGCAGCCTGTCATGGACACAG....................2311.001.00-----------------1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGATGGACTGGAAGTGGGC.................................................................................................................2011.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGATGGACTGGAAGTGGGCAGCA.............................................................................................................2411.001.00-----------------------------------------------------------------------------------------------------------1.00---------------------------------
............................................................................................................................................................................ATGGACACAGCCACAGCAACAGAGCAGGCCA311.000.00-----------------------1.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................TGGACACAGCCACAGCAACAGAGCAGGC.2811.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCATA.................................................211.000.00-------------------------------------------------------------------------------------------------------1.00-------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGAC............................................................................................................................2811.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAT..................................................201.000.00-------------------------------------------------------------------------------------------1.00-------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGA........................................................................................................................3211.001.00-----------------------1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................TGGACTGGAAGTGGGTGG...............................................................................................................181.000.00--------------------------------------------------------------------------------------------------------------------------------------1.00------
...................................................TGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCCAG..................................................10111.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTCTTCCCCTTGTCTCTCCATT.................................................221.000.00----------------------------------------------------------------------------1.00----------------------------------------------------------------
........................................................................................................................................CCCCTTGTCTCTCCAGTT................................................181.000.00-----------------------------------------------------------------------------------------------------------------------1.00---------------------
......................................................................GGATGGACTGGAAGTGGGCAGCATGGAGCTGACC..................................................................................................3411.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGTAA..................................................................................................................................2111.007.00--------------------------1.00------------------------------------------------------------------------------------------------------------------
........................................................................ATGGACTGGAAGTGGGCAGCATTT..........................................................................................................241.000.00------------------------------------------------------------------------------------------------1.00--------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGTTT...............................................2311.008.00-----------------------------------------------------------------------------------------------------------------------------------1.00---------
.........................................................................TGGACTGGAAGTGGGCAGCA.............................................................................................................2011.001.00---------------------------------------------------------------------------------1.00-----------------------------------------------------------
.............................................................................................................................................................................TGGACACAGCCACAGCAACAGATTAG...261.000.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGAT.................................................................................................................................2311.0020.00-------------------------------------------------------------------------------------------------------------------------------------1.00-------
.............................................................................................................................TAATGCCTCTTCCCCTTGTCTCTCCAG..................................................2711.001.00-------------------------------------------------------------------------------------------------------------------1.00-------------------------
..................................................GTGAGTGACAGGGGAAATGGGGAAA...............................................................................................................................2511.008.00-------------------------------------------1.00-------------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGTAT...............................................2311.008.00------------------------------------------------1.00--------------------------------------------------------------------------------------------
......................................................................GGATGGACTGGAAGTGGGCAGCATGGAGCTG.....................................................................................................3111.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................ACAGGGGAAATGGGGATGGA.............................................................................................................................2011.001.00--------------------------------1.00------------------------------------------------------------------------------------------------------------
.......................................................................GATGGACTGGAAGTGGGCAGCA.............................................................................................................2211.001.00--------------------1.00------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGAA.................................................................................................................................2211.0015.00------------------------------------------------------1.00--------------------------------------------------------------------------------------
...................................................................................................................................CTCTTCCCCTTGTCTCTCCCGA.................................................221.000.00--------------------------------------------1.00------------------------------------------------------------------------------------------------
...........................................................................................................................................................................CATGGACACAGCCACAGCAACAGAGCAG...2811.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................GGGGATGGACTGGAAGTG....................................................................................................................1811.001.00----------------------------1.00----------------------------------------------------------------------------------------------------------------
..............................................................................................................................AATGCCTCTTCCCCTTGTCTCTC.....................................................2311.001.00------------------------------------------------------------------------------------------------------------1.00--------------------------------
.....................................................................................................................................CTTCCCCTTGTCTCTCCAGT.................................................201.000.00---------------------------------------------------------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................ACTATCAGAGCAGCCTGTCATGGAC........................2511.001.00--------------------------------------------------------------------------------------------------------------1.00------------------------------
.............................................................................................................................................................................TGGACACAGCCACAGCAACAGAGCAGT..271.000.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGG.........................................................................................................................3111.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTCTTCCCCTTGTCTCTCCAGTA................................................231.000.00----------------------------------------------------1.00----------------------------------------------------------------------------------------
...GAAGCAAAGTAGCAGCAGCACAACC..............................................................................................................................................................................2511.001.00------------------------1.00--------------------------------------------------------------------------------------------------------------------
..........................................................................................................................ACATAATGCCTCTTCCCCTTGT..........................................................2211.001.00----------------------------------------------------------------------------------1.00----------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGT.................................................................................................................................2311.0019.00----------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGA.............................................................................................................................2711.001.00----------------------------------------1.00----------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGAA................................................................................................................................2411.008.00----1.00----------------------------------------------------------------------------------------------------------------------------------------
..................................................................ATGGGGATGGACTGGAAGGGG...................................................................................................................211.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATGG..............................................................................................................................2511.001.00-----------------------1.00---------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGAGGG..............................................................................................................................2611.008.00--------1.00------------------------------------------------------------------------------------------------------------------------------------
.........................................................................TGGACTGGAAGTGGGCAGCATGGAGCT......................................................................................................2711.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................CTATCAGAGCAGCCTGTCAT............................2011.001.00---------------------------------------1.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCCGTT................................................2221.001.00-----------------------------------------------------------------1.00---------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGTAA.................................................................................................................................2211.008.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTC.....................................................9911.001.00----------------------------------------------------------------------------------------------------------------------1.00----------------------
...................................................TGAGTGACAGGGGAAATGGGGATTT..............................................................................................................................2511.0020.00--------------------------------------------------1.00------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGC.................................................2111.001.00---------------------1.00-----------------------------------------------------------------------------------------------------------------------
.........................................................................TGGACTGGAAGTGGGCAGCATGGAG........................................................................................................2511.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------
.......................................................................GATGGACTGGAAGTGGGCAGC..............................................................................................................2111.001.00----1.00----------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCC....................................................1821.001.00--0.50-------------------------------------------------------------------------------------------------------------------------------------0.50----
.................GCAGCACAACCAGCCAAGGTGGTGTCAAACGCT........................................................................................................................................................3311.001.00------------------------------------------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................................................TCATGGACACAGCCACAGCAACAGAGCAG...2911.001.00----------------------------------------------------------------------------------------------------------1.00----------------------------------
........................................GTCAAACGCTGTGAGTGAC...............................................................................................................................................1911.001.00-----------------------------------------------1.00---------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGTT.................................................................................................................................2311.0020.00-----------------------------------------1.00---------------------------------------------------------------------------------------------------
....................................................GAGTGACAGGGGAAATGGGGAT................................................................................................................................2211.001.00----------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CCTCTTCCCCTTGTCTCTCCA...................................................2111.001.00--------------------------------------------------------------------------------------------------1.00------------------------------------------
....................................................GAGTGACAGGGGAAATGGGGA.................................................................................................................................2111.001.00-------------------------------1.00-------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGAAG................................................................................................................................2311.0015.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................................ATGGGGATGGACTGGAA.......................................................................................................................1750.400.40----------------------------0.20-------------------------------------------------------------------------------------------------------------0.20--
......................................................................GGATGGACTGGAAGTGG...................................................................................................................1730.330.33----------------------------------------------------------0.33----------------------------------------------------------------------------------
..........................................................................................................................................................................TCATGGACACAGCCAC................1630.330.33---------------------------------------------------------0.33-----------------------------------------------------------------------------------
.........................................................................................................................................................................................CAGCAACAGAGCAGGC.1680.120.12--------------------------------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
GAAGAAGCAAAGTAGCAGCAGCACAACCAGCCAAGGTGGTGTCAAACGCTGTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCCAGCACTATCAGAGCAGCCTGTCATGGACACAGCCACAGCAACAGAGCAGGCA
....................................................(((.((((((((((..((.(((((.........(((((((.....)))).)))))))).((((...))))........))..))))))).))).))).....................................................
..................................................51...................................................................................................152................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR189786SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189787SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189784RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR038857(GSM458540)
D20. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189783SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040028(GSM532913)
G026N. (cervix)		SRR029132(GSM416761)
MB-MDA231. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		GSM359178(GSM359178)
hela_nucl_t. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR040031(GSM532916)
G013T. (cervix)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038858(GSM458541)
MEL202. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM532889(GSM532889)
G576N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577453(Rovira)
total RNA. (breast)		SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040038(GSM532923)
G531N. (cervix)		GSM956925PAZD5SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		TAX577579(Rovira)
total RNA. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029130(GSM416759)
DLD2. (cell line)		SRR040027(GSM532912)
G220T. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029128(GSM416757)
H520. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
.....................................................................................................................................CTTCCCCTTGTCTCTCCAGCACT.............................................. 2311.001.00------------------------1.00--------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CCAACATAATGCCTCTG.................................................................. 171.000.00-------------------------------------1.00-------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CAGCCTGTCATGGACACAGCGT................. 221.000.00------------------------1.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTTGTCTCTCCAGCACTAT............................................ 2211.001.00-----------------------------------------------------------------------------------------------------------------------------1.00---------------
.....................................................................................................ACCTTCATCATGGCTGAC................................................................................... 181.000.00-------------------------------------1.00-------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................GACACAGCCACAGCAA........... 1640.250.25-----------------------------------------------------------------------------------------------------------------------------------------0.25---
..................................................................................................................................................................................ACAGCCACAGCAACAG........ 1670.140.14-------------------------------------------------------------------------------------------------------------------------------------------0.14-