dme-mir-980- 12- and 20-way alignments

dme-mir-980	chrX:174205-174302 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	antisense_to_intron

Legend:

   mature strand at position 174222-174242
   star strand at position 174264-174287
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chrX:174190-174317 -	GCGTGT---GAAATACGAAGT-------------------------TGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACT----------------------------CCCGAATAATA
droSim1	chrX:118257-118384 -	GCGTGT---GAAATACGAAGT-------------------------TGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACT----------------------------GCCtttTttTt
droSec1	super_10:47183-47310 -	GCGTGT---GAAATACGAAGT-------------------------TGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACT----------------------------GCCtttTttTt
droYak2	chrX:117050-117182 -	GCGTGT---GAGATGTGAAGT-------------------------TGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAGCTTTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCGACT-----------------------GCCAAATGATA
droEre2	scaffold_4644:121637-121764 -	GCGTGT---GAAATGTGAAGT-------------------------TGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTACCTCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACT----------------------------GCAAAATTATA
droAna3	scaffold_13117:4815180-4815314 -	ttGTGATAAGAAATGT---CC----TAGGAAGT-------------AATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGACTTT-AAATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACT----------------------------TGCAGAATATG
dp4	chrXL_group1e:4097633-4097766 -	GTGAAT--------TCCCGCCACAAA-------AGAGAAACAAATT-----GAATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTG-TTTCTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAACG----------------------------T-AAAGCCGAA
droPer1	super_17:1039182-1039315 -	GTGAAT--------TCCCGCCACAAA-------AGAGAAACAAATT-----GTATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTG-TTTCTAATACTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAACG----------------------------T-AAAGCCGAA
droWil1	scaffold_181096:8731374-8731497 +	GCGGTT---TATGGTCCAGCT-------------------------ACATTATACATTCATTTCTCATTTAATTCCAC---TTCACTGTTTTA---------------------TCAAGCCA---TATCCTAATCTGGTtTtTtg-----tTtgGTtTtttTtTGtTGgtTtTGTtTtttTTTt
droVir3	scaffold_10277:1011-1140 -	AAATTT---GGA-------CCAAATGTGAGAGC-------------GCATTGCATGTGAGTCCCTCATTTGGCAGGTTTAGCTGCTTTT-AATACGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTTAAACAACT----------------------------T--AAACAACA
droMoj3	scaffold_6473:11075547-11075659 +	TTATTT------ATATGAACC-------------------------GCATTGCATGTGAGTCCCTCATTTGGTGCGCTTAGCTGTTTTTCAATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGTTTGTAATACAAC----------------------------------------
droGri2	scaffold_14853:6339025-6339158 +	TTATTT---AAT--TCTGATT----ATGAGAGC-------------GCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTGCTTTTCAATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACT----------------------------GAGGAAAAATA

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chrX:174190-174317 -	NA	GCGTGT--------G-----AAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTAC-TCCTT-TTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCC-----------CG---AATAA---TA
droSim1	chrX:118257-118384 -	57	GCGTGT--------G-----AAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCAC-TACTT-TTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGC-----------CA---AATAA---TA
droSec1	super_10:47183-47310 -	56	GCGTGT--------G-----AAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCAC-TACTT-TTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGC-----------CA---AATAA---TA
droYak2	chrX:117050-117182 -	94	GCGTGT--------G-----AGATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAG-CTTTT-TTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCGACT------GCCA---AATGA---TA
droEre2	scaffold_4644:121637-121764 -	14	GCGTGT--------G-----AAATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAC-CTCTT-TTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACTGC-----------AA---AATTA---TA
droEug1	scf7180000409277:495710-495839 -	3	GCGTTT--------G-----GAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGAC-CTTTG-TTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGGCAG---------G---ATAAA---TG
droBia1	scf7180000301760:1131731-1131847 -	5	GCGGTT------T-C-----GGCGGCGAGGTTAATCATATGTCAGTTTTTCATTTGGCCTGGCTAGCTTAC-TCCT--GTTCAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGGTTGCGGCTCAACT----------------------------
droTak1	scf7180000415179:121502-121639 -	57	GCGGTT------TGC----AGAATGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCTTGCCTAGCTGAC-TTCTG-TTTAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACTGGCAGGA------TG---TGTGTCC-TG
droEle1	scf7180000491011:1178486-1178616 -	7	GCATCT--------G----AGAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGACTAGCTGAC-TTTTG-TTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGACTG---------G---GATAT---AT
droRho1	scf7180000779506:958280-958410 -	132	GAATAT------TTG----GGAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGGGCCTAGCTGAC-TTCTG-TTAAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGG-----------CA---AGGAT---AT
droFic1	scf7180000453927:606437-606509 -	18	---------------------------------------------------------CGTGCCTAGCTGAC-TTCTG-TTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGCTCAACT----------------------------
droKik1	scf7180000302544:871495-871630 +	14	GCCTGT--------G-----GAAGTGCTAGTTAATTGTATGTCAGTTTTTCATTTGGCCTGCCTAGCTGAC-TTTC---ATAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACGGAAAGAGGA----TATAGAAGAA---GG
droAna3	scaffold_13117:4815182-4815314 -	21	AAGTGATAAGAAATG-----TCCTAGGAAGTAATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGAC-TTTA--AATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTTG-----------C-----AGAA---TA
droBip1	scf7180000395508:43145-43265 +	15	AGATTT--------G-----TCCTTGAAAGTAAATTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGAC-TTTA--AATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTTG--------------------A---AA
dp4	chrXL_group1e:4097625-4097758 -	2	CCGCCA--------C-----AAAAGAGAAACAAATTGAATGTGAGTCTCTCACATGGCTGGTCTAGCTGAC-TTGT--TTCTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAACGTAAAGC-------CG---AAAATCGTAA
droPer1	super_17:1039174-1039307 -	2	CCGCCA--------C-----AAAAGAGAAACAAATTGTATGTGAGTCTCTCACATGGCTGGTCTAGCTGAC-TTGT--TTCTAATACTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAACGTAAAGC-------CG---AAAATCGTAA
droWil1	scaffold_181096:8731771-8731891 +	3	---------------------------------ATTGTGTGTGAGTCTTTCACTGGGCGTGCTTAGCTAGAAATTTATTTACCATATTGCTAGCTGCCTTGTGAAGTGCTTACGTGTAATTGTTGAACAACAAAAAAAAATCAGAAA---AAGCA---TA
droVir3	scaffold_10277:1011-1148 -	2	GGGCTATAAAATTTGGACCAAATGTGAGAGCGCATTGCATGTGAGTCCCTCATTTGGCAGGTTTAGCTGCT-TTTA--ATACGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTTAAACAACTTA----------------AACAA---CA
droMoj3	Unknown	NA	----------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2	scaffold_14853:6339037-6339158 +	1	GATTAT--------G-----AG------AGCGCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTGCT-TTTCA-ATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACTGA-----------GG---AAAAA---TA

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

GCGTGT---GAAATACGAAGT-------------------------TGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACT----------------------------CCCGAATAATA

Size

Hit Count

Total Norm

droSim1

GCGTGT---GAAATACGAAGT-------------------------TGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACT----------------------------GCCtttTttTt	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
.......................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................	21	1	728.00	497.00	170.00	46.00	15.00
..........................................................AGTTTTTCATTTGGCGTGGCTAGC......................................................................................................	24	1	82.00	43.00	15.00	3.00	21.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	81.00	67.00	8.00	1.00	5.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................	20	1	18.00	0.00	17.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................	19	1	11.00	0.00	9.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTT............................................................	21	1	7.00	7.00	0.00	0.00	0.00
..........................................................AGTTTTTCATTTGGCGTGGCTAG.......................................................................................................	23	1	6.00	2.00	2.00	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................	21	1	4.00	0.00	3.00	1.00	0.00
..........................................................AGTTTTTCATTTGGCGTGGCTAAC......................................................................................................	24	1	3.00	0.00	1.00	0.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGCGCTT............................................................	21	1	3.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTT............................................................	21	1	3.00	2.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCCT............................................................	21	1	2.00	2.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAGC.........................................................	24	1	2.00	0.00	2.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGCAGGCCTT............................................................	21	1	2.00	2.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTT............................................................	21	1	2.00	2.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTT............................................................	21	1	2.00	1.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCC.............................................................	20	1	2.00	0.00	2.00	0.00	0.00
..........................................................AGTTTTTCATTCGGCGGG............................................................................................................	18	1	2.00	0.00	1.00	0.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTT............................................................	21	1	2.00	2.00	0.00	0.00	0.00
..........................................................AGTTTTTCATTTGGCGTGGCTAA.......................................................................................................	23	1	2.00	0.00	0.00	0.00	2.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTT............................................................	21	1	2.00	2.00	0.00	0.00	0.00
..........................................................AGTTTTTCATTTGGCGTGGCT.........................................................................................................	21	1	2.00	0.00	2.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCT.............................................................	20	1	2.00	0.00	0.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGTTGGGCTTA...........................................................	22	1	1.00	1.00	0.00	0.00	0.00
..........................................................AGTTTTTCATTTTGCGTGGCTATC......................................................................................................	24	1	1.00	1.00	0.00	0.00	0.00
................................................................TCATTTGGCGTGGCTAAC......................................................................................................	18	1	1.00	0.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTTA...........................................................	22	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCG.............................................................	20	1	1.00	0.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGATGGGCTTA...........................................................	22	1	1.00	0.00	0.00	0.00	1.00
..........................................................AGTTTTTCATTTGGCGTGGCTAGG......................................................................................................	24	1	1.00	1.00	0.00	0.00	0.00
..........................................................AGTTTTCCATTTGGCGTGGCTAGC......................................................................................................	24	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCGT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCCTGTGAAGGGCTT............................................................	21	1	1.00	0.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCGTGTGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................	21	1	1.00	0.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCGTGTGAAGGGTTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTAAAGGGCTT............................................................	21	1	1.00	0.00	0.00	0.00	1.00
.......................................................................................................TAGCTGTCTTGTGATGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
..........................................................AGGTTTTCATTTGGCGTGGCTAGC......................................................................................................	24	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................CAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCTTA...........................................................	22	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTCTGAAGGGCTT............................................................	21	1	1.00	0.00	1.00	0.00	0.00
.......................................................................................................TAGCCGCCTTGGGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGTCGCCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGGAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCGGCATTGTGAAGGGCTTA...........................................................	22	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGGTGCCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
..........................................................AGTTTTTCATTTGGCGCTGCTAGC......................................................................................................	24	1	1.00	1.00	0.00	0.00	0.00
..........................................................AGTTTTTCATTTGGCGTGGCTCGC......................................................................................................	24	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTTA...........................................................	22	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAACTGCCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTTA...........................................................	22	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................	23	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAAGGCTTA...........................................................	22	1	1.00	0.00	0.00	0.00	1.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCT.............................................................	20	1	1.00	0.00	0.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGTAGGGCGT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGCGT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTCGTGAAGGGCTT............................................................	21	1	1.00	0.00	1.00	0.00	0.00
..........................................................AGTTTTTCATTTGGCGTGGC..........................................................................................................	20	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTCGCGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTTA...........................................................	22	1	1.00	1.00	0.00	0.00	0.00
..........................................................CGATTTTCATTTGGCGTGGCTAGC......................................................................................................	24	1	1.00	1.00	0.00	0.00	0.00
..........................................................AGATTTTCATTTGGCGTGGCTAGA......................................................................................................	24	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGATGTCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
................................................................TCATTTGGCGTGGCTAGC......................................................................................................	18	1	1.00	0.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTxxTGAAGGGCT.............................................................	18	1	1.00	0.00	1.00	0.00	0.00
.......................................................................................................TAGCTTCCTTGTGAAGGGCTTA...........................................................	22	1	1.00	0.00	1.00	0.00	0.00
..........................................................AGTTTTTCATTTGGATTGGCTAGC......................................................................................................	24	1	1.00	0.00	0.00	0.00	1.00
.......................................................................................................TAGCTGACTTGGGAAGGGCTTA...........................................................	22	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGATGGGGTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCTTTGTGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTT............................................................	21	1	1.00	0.00	1.00	0.00	0.00
.......................................................................................................TAGAGGCCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00	0.00	0.00	0.00
........................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................	20	1	1.00	1.00	0.00	0.00	0.00

droSec1

GCGTGT---GAAATACGAAGT-------------------------TGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACT----------------------------GCCtttTttTt	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
.......................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................	21	1	24461.00	6496.00	11016.00	6949.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	2395.00	380.00	1722.00	293.00
..........................................................AGTTTTTCATTTGGCGTGGCTAGC......................................................................................................	24	1	955.00	38.00	804.00	113.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................	20	1	117.00	3.00	68.00	46.00
.......................................................................................................TAGCTGCCTTGTGAAGGG...............................................................	18	1	90.00	1.00	78.00	11.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................	22	1	89.00	45.00	6.00	38.00
.......................................................................................................TACCTGCCTTGTGAAGGGCTT............................................................	21	1	68.00	42.00	15.00	11.00
.......................................................................................................TATCTGCCTTGTGAAGGGCTT............................................................	21	1	66.00	31.00	18.00	17.00
.......................................................................................................TAGCTGCCTTGTGAAGGGTTT............................................................	21	1	65.00	32.00	19.00	14.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATT............................................................	21	1	64.00	52.00	4.00	8.00
.......................................................................................................TAGTTGCCTTGTGAAGGGCTT............................................................	21	1	60.00	2.00	55.00	3.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTT............................................................	21	1	53.00	1.00	4.00	48.00
..........................................................AGTTTTTCATTTGGCGTGGCTAG.......................................................................................................	23	1	52.00	9.00	38.00	5.00
.......................................................................................................TAACTGCCTTGTGAAGGGCTT............................................................	21	1	42.00	27.00	10.00	5.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCCT............................................................	21	1	42.00	10.00	22.00	10.00
.......................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................	19	1	40.00	2.00	35.00	3.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTT............................................................	21	1	40.00	10.00	16.00	14.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTT............................................................	21	1	38.00	4.00	23.00	11.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................	23	1	37.00	14.00	13.00	10.00
.......................................................................................................TAGTTGCCTTGTGAAGGGCTTA...........................................................	22	1	34.00	0.00	34.00	0.00
.......................................................................................................TAGCTGCCTTGTGGAGGGCTT............................................................	21	1	34.00	6.00	23.00	5.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTT............................................................	21	1	32.00	9.00	15.00	8.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................	23	1	32.00	8.00	14.00	10.00
.......................................................................................................TAGCTGCCCTGTGAAGGGCTT............................................................	21	1	31.00	9.00	14.00	8.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCTT............................................................	21	1	31.00	13.00	12.00	6.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTT............................................................	21	1	29.00	12.00	15.00	2.00
.......................................................................................................TAGCTGCCTCGTGAAGGGCTT............................................................	21	1	28.00	7.00	14.00	7.00
.......................................................................................................TAGCTGCCTTGTGAAGGGGTT............................................................	21	1	25.00	24.00	0.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................	23	1	24.00	6.00	10.00	8.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................	22	1	24.00	3.00	15.00	6.00
.......................................................................................................TAGCTGCCTxxTGAAGGGCTT............................................................	19	1	22.00	4.00	10.00	8.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTTA...........................................................	22	1	22.00	0.00	2.00	20.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTT............................................................	21	1	20.00	6.00	10.00	4.00
.......................................................................................................TGGCTGCCTTGTGAAGGGCTT............................................................	21	1	20.00	2.00	8.00	10.00
..........................................................AGTTTTTCATTTGGCGTGGCT.........................................................................................................	21	1	19.00	5.00	6.00	8.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTT............................................................	21	1	18.00	2.00	3.00	13.00
.......................................................................................................TAGCTTCCTTGTGAAGGGCTT............................................................	21	1	18.00	7.00	5.00	6.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................	21	1	17.00	3.00	9.00	5.00
.......................................................................................................TAGCTGCTTTGTGAAGGGCTTA...........................................................	22	1	17.00	0.00	17.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGCCTT............................................................	21	1	16.00	8.00	5.00	3.00
.......................................................................................................TAGCTGCCTTGTCAAGGGCTT............................................................	21	1	16.00	3.00	9.00	4.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTT............................................................	21	1	15.00	2.00	4.00	9.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTT............................................................	21	1	15.00	3.00	6.00	6.00
.......................................................................................................TAGCTGCCTTGTAAAGGGCTT............................................................	21	1	15.00	4.00	8.00	3.00
.......................................................................................................CAGCTGCCTTGTGAAGGGCTT............................................................	21	1	14.00	2.00	6.00	6.00
.......................................................................................................TAGCTGCCTTGTGAATGGCTT............................................................	21	1	13.00	0.00	5.00	8.00
.......................................................................................................TAGCTGCCTTGTGATGGGCTT............................................................	21	1	13.00	1.00	11.00	1.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTT............................................................	21	1	12.00	5.00	1.00	6.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................	23	1	12.00	8.00	0.00	4.00
.......................................................................................................TAGCTxCCTTGTGAAGGGCTT............................................................	20	1	12.00	3.00	6.00	3.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCAT............................................................	21	1	12.00	1.00	2.00	9.00
.......................................................................................................TAGCTGCCTTGTGAAAGGCTT............................................................	21	1	12.00	2.00	9.00	1.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTTA...........................................................	22	1	12.00	0.00	12.00	0.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTT............................................................	21	1	12.00	1.00	8.00	3.00
.......................................................................................................TTGCTGCCTTGTGAAGGGCTT............................................................	21	1	11.00	0.00	8.00	3.00
.......................................................................................................TAGCTGCTTTGTGAAGGGCTT............................................................	21	1	11.00	3.00	6.00	2.00
.......................................................................................................TAGCTGCCTTGTGAACGGCTT............................................................	21	1	11.00	2.00	6.00	3.00
.......................................................................................................TAGCTGCCTTGTGAAGCGCTT............................................................	21	1	11.00	3.00	3.00	5.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTTA...........................................................	22	1	11.00	0.00	11.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................	24	1	10.00	5.00	0.00	5.00
.......................................................................................................TAGCTGCCTTTTGAAGGGCTT............................................................	21	1	10.00	4.00	3.00	3.00
.......................................................................................................TAGCTGCCTTGTGAAGAGCTT............................................................	21	1	10.00	3.00	6.00	1.00
........................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................	20	1	10.00	1.00	7.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................	23	1	10.00	5.00	3.00	2.00
.......................................................................................................AAGCTGCCTTGTGAAGGGCTT............................................................	21	1	9.00	1.00	2.00	6.00
.......................................................................................................TAGCTGCCTTCTGAAGGGCTT............................................................	21	1	8.00	2.00	2.00	4.00
.......................................................................................................TAGCTGCCATGTGAAGGGCTT............................................................	21	1	8.00	1.00	5.00	2.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTT............................................................	21	1	8.00	4.00	2.00	2.00
.......................................................................................................TAGCAGCCTTGTGAAGGGCTT............................................................	21	1	7.00	3.00	3.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................	21	1	7.00	3.00	3.00	1.00
.......................................................................................................TAGCTGCCTTGTGxAGGGCTT............................................................	20	1	7.00	1.00	5.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGACTT............................................................	21	1	7.00	3.00	1.00	3.00
.......................................................................................................TAGCTGCCTTGTGTAGGGCTT............................................................	21	1	6.00	3.00	3.00	0.00
...........................................................AGTTTTCATTTGGCGTGGCTAGC......................................................................................................	23	1	6.00	0.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTTA...........................................................	22	1	6.00	0.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGAGAAGGGCTT............................................................	21	1	6.00	1.00	4.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAAGGCTTA...........................................................	22	1	6.00	0.00	4.00	2.00
.......................................................................................................TAGCTGCCTTATGAAGGGCTT............................................................	21	1	6.00	0.00	3.00	3.00
.......................................................................................................TAGCGGCCTTGTGAAGGGCTT............................................................	21	1	6.00	1.00	3.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................	22	1	6.00	3.00	2.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTT............................................................	21	1	6.00	2.00	1.00	3.00
.......................................................................................................GAGCTGCCTTGTGAAGGGCTT............................................................	21	1	6.00	0.00	3.00	3.00
.......................................................................................................TAGCTGCCTAGTGAAGGGCTT............................................................	21	1	5.00	0.00	3.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................	22	1	5.00	2.00	1.00	2.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCTTA...........................................................	23	1	5.00	1.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTTA...........................................................	22	1	4.00	2.00	2.00	0.00
..........................................................AGTTTTTCATTTGGCGTGGCTAGCT.....................................................................................................	25	1	4.00	0.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTTA...........................................................	22	1	4.00	0.00	4.00	0.00
..........................................................AGTTTTTCATTTGGCGTGGCTA........................................................................................................	22	1	4.00	0.00	3.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATTA...........................................................	22	1	4.00	2.00	2.00	0.00
.......................................................................................................TAGCTGGCTTGTGAAGGGCTT............................................................	21	1	4.00	0.00	1.00	3.00
.......................................................................................................TAGCTGCCTTGTGAAGGGTTTA...........................................................	22	1	4.00	1.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCCTA...........................................................	22	1	4.00	1.00	2.00	1.00
.......................................................................................................TAGCTGCCTTGTxAAGGGCTT............................................................	20	1	3.00	1.00	1.00	1.00
.......................................................................................................TGGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	3.00	0.00	3.00	0.00
.........................................................................................................GCTGCCTTGTGAAGGGCTT............................................................	19	1	3.00	0.00	2.00	1.00
.......................................................................................................TAGCTGCCTTCTGAAGGGCTTA...........................................................	22	1	3.00	0.00	3.00	0.00
...........................................................AGTTTTCATTTGGCGTGGCTAG.......................................................................................................	22	1	3.00	0.00	3.00	0.00
.......................................................................................................TACCTGCCTTGTGAAGGGCTTA...........................................................	22	1	3.00	0.00	2.00	1.00
.......................................................................................................TAGCTGCCxTGTGAAGGGCTT............................................................	20	1	3.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGAATGGCTTA...........................................................	22	1	3.00	0.00	2.00	1.00

droYak2

GCGTGT---GAGATGTGAAGT-------------------------TGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAGCTTTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCGACT-----------------------GCCAAATGATA	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
.......................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................	21	1	8709.00	663.00	1835.00	2233.00	3957.00	21.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	880.00	77.00	177.00	175.00	450.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................	20	1	117.00	10.00	35.00	1.00	70.00	1.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTT............................................................	21	1	115.00	1.00	17.00	3.00	94.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................	22	1	68.00	1.00	16.00	11.00	39.00	1.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTT............................................................	21	1	64.00	2.00	6.00	0.00	56.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTT............................................................	21	1	51.00	1.00	7.00	6.00	37.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................	23	1	41.00	0.00	12.00	8.00	21.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTT............................................................	21	1	32.00	2.00	1.00	1.00	28.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTT............................................................	21	1	32.00	0.00	4.00	0.00	28.00	0.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTT............................................................	21	1	30.00	0.00	3.00	0.00	27.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTT............................................................	21	1	27.00	0.00	8.00	2.00	17.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTT............................................................	21	1	24.00	1.00	1.00	0.00	22.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................	23	1	23.00	0.00	2.00	8.00	13.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATT............................................................	21	1	20.00	3.00	3.00	3.00	11.00	0.00
.......................................................................................................TAGCTGCCTTGTGAATGGCTT............................................................	21	1	20.00	0.00	8.00	2.00	10.00	0.00
.......................................................................................................TAGCTGCCTTGTGGAGGGCTT............................................................	21	1	20.00	2.00	4.00	4.00	10.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGTGCTT............................................................	21	1	17.00	0.00	6.00	0.00	11.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................	22	1	16.00	0.00	4.00	2.00	10.00	0.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................	22	1	15.00	7.00	1.00	5.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................	22	1	15.00	0.00	3.00	3.00	9.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGGTT............................................................	21	1	14.00	1.00	4.00	0.00	9.00	0.00
.......................................................................................................TAGCTGCCTGGTGAAGGGCTT............................................................	21	1	14.00	0.00	4.00	0.00	10.00	0.00
.......................................................................................................TAGCGGCCTTGTGAAGGGCTT............................................................	21	1	14.00	0.00	0.00	4.00	10.00	0.00
.......................................................................................................TAGCTGCCTTGTGTAGGGCTT............................................................	21	1	14.00	3.00	1.00	0.00	10.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................	23	1	13.00	0.00	3.00	1.00	9.00	0.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCTT............................................................	21	1	13.00	0.00	4.00	5.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGATGGGCTT............................................................	21	1	13.00	1.00	1.00	0.00	11.00	0.00
.......................................................................................................TAACTGCCTTGTGAAGGGCTT............................................................	21	1	12.00	0.00	1.00	3.00	8.00	0.00
.......................................................................................................TAGCTGCCTTGTAAAGGGCTT............................................................	21	1	12.00	1.00	5.00	1.00	5.00	0.00
.......................................................................................................CAGCTGCCTTGTGAAGGGCTT............................................................	21	1	12.00	0.00	2.00	3.00	7.00	0.00
.......................................................................................................TACCTGCCTTGTGAAGGGCTT............................................................	21	1	11.00	0.00	0.00	11.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................	23	1	11.00	0.00	2.00	2.00	7.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTTA...........................................................	22	1	11.00	0.00	0.00	0.00	11.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTT............................................................	21	1	10.00	3.00	0.00	1.00	6.00	0.00
.......................................................................................................TAGCTGCCTTTTGAAGGGCTT............................................................	21	1	10.00	0.00	2.00	1.00	7.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTTA...........................................................	22	1	9.00	0.00	1.00	4.00	4.00	0.00
.......................................................................................................TAGCTGCCCTGTGAAGGGCTT............................................................	21	1	9.00	0.00	2.00	2.00	5.00	0.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTT............................................................	21	1	9.00	0.00	4.00	2.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCGT............................................................	21	1	8.00	1.00	4.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................	21	1	8.00	0.00	1.00	3.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGG...............................................................	18	1	8.00	0.00	4.00	2.00	2.00	0.00
..........................................................AGTTTTTCATTTGGCGTGCCTAGC......................................................................................................	24	1	8.00	6.00	0.00	1.00	1.00	0.00
.......................................................................................................TAGCTGCCTCGTGAAGGGCTT............................................................	21	1	8.00	1.00	1.00	2.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTTA...........................................................	22	1	8.00	1.00	1.00	0.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGCGCTT............................................................	21	1	8.00	1.00	1.00	2.00	4.00	0.00
.......................................................................................................TAGCTTCCTTGTGAAGGGCTT............................................................	21	1	8.00	0.00	2.00	4.00	2.00	0.00
.......................................................................................................TAGCTGCCGTGTGAAGGGCTT............................................................	21	1	7.00	0.00	1.00	0.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGCCTT............................................................	21	1	7.00	0.00	1.00	2.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAACGGCTT............................................................	21	1	7.00	0.00	2.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGAGCTT............................................................	21	1	7.00	0.00	3.00	0.00	4.00	0.00
.......................................................................................................AAGCTGCCTTGTGAAGGGCTT............................................................	21	1	7.00	0.00	3.00	0.00	4.00	0.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTT............................................................	21	1	6.00	0.00	2.00	0.00	4.00	0.00
.......................................................................................................TGGCTGCCTTGTGAAGGGCTT............................................................	21	1	6.00	0.00	1.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................	21	1	6.00	0.00	2.00	1.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCCT............................................................	21	1	6.00	0.00	1.00	1.00	4.00	0.00
.......................................................................................................TAGCTGCGTTGTGAAGGGCTT............................................................	21	1	6.00	0.00	1.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGCCGGGCTT............................................................	21	1	6.00	0.00	1.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAAGGCTT............................................................	21	1	6.00	0.00	4.00	1.00	1.00	0.00
........................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................	20	1	6.00	0.00	3.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGCGTAGGGCTT............................................................	21	1	6.00	0.00	1.00	0.00	5.00	0.00
.......................................................................................................TAGCAGCCTTGTGAAGGGCTT............................................................	21	1	5.00	0.00	0.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTT............................................................	21	1	5.00	1.00	0.00	0.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTTA...........................................................	22	1	5.00	0.00	2.00	1.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGTTT............................................................	21	1	5.00	0.00	0.00	5.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTG............................................................	21	1	5.00	1.00	0.00	0.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................	24	1	5.00	0.00	0.00	3.00	2.00	0.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTT............................................................	21	1	5.00	0.00	0.00	1.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGGAGGGCTTA...........................................................	22	1	5.00	2.00	0.00	0.00	3.00	0.00
.......................................................................................................TAGCGGCCTTGGGAAGGGCTT............................................................	21	1	5.00	0.00	2.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTTA...........................................................	22	1	5.00	0.00	0.00	0.00	5.00	0.00
.......................................................................................................TATCTGCCTTGTGAAGGGCTT............................................................	21	1	4.00	0.00	1.00	0.00	3.00	0.00
.......................................................................................................TAGCGGCCGTGTGAAGGGCTT............................................................	21	1	4.00	0.00	0.00	0.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................	23	1	4.00	1.00	0.00	1.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGACTT............................................................	21	1	4.00	0.00	1.00	1.00	2.00	0.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTT............................................................	21	1	4.00	1.00	1.00	0.00	2.00	0.00
.......................................................................................................GAGCTGCCTTGTGAAGGGCTT............................................................	21	1	4.00	0.00	2.00	0.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGTTGGGCTT............................................................	21	1	4.00	0.00	0.00	0.00	4.00	0.00
.......................................................................................................TAGCTGCCTTATGAAGGGCTT............................................................	21	1	4.00	1.00	1.00	0.00	2.00	0.00
.......................................................................................................TAGCTGCCTGGTGAGGGGCTT............................................................	21	1	4.00	0.00	0.00	0.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTTC...........................................................	22	1	4.00	0.00	0.00	0.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTCAAGGGCTT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGGGTAGGGCTT............................................................	21	1	3.00	0.00	1.00	0.00	2.00	0.00
.......................................................................................................TAGCTGCCTTCTGAAGGGCTT............................................................	21	1	3.00	0.00	1.00	0.00	2.00	0.00
.......................................................................................................TAGCGGCCTTGTGAGGGGCTT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCGT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................TAGCTGGCTTGTGAAGGGCTT............................................................	21	1	3.00	0.00	1.00	0.00	2.00	0.00
.......................................................................................................TGGCTGCCTTGTGAGGGGCTT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................TAGCGGCCTTGTGGAGGGCTT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................CAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	3.00	0.00	1.00	0.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGTGGGGCTT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGTGCTT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCTTA...........................................................	22	1	3.00	0.00	0.00	1.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................	19	1	3.00	0.00	1.00	1.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................	24	1	3.00	0.00	1.00	1.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGTTCTT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................TCGCTGCCTTGTGAAGGGCTT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................TACCTGCCTTGTGTAGGGCTT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGCGGAGGGCTT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCT.............................................................	20	1	3.00	0.00	0.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGGGAGGGGCTT............................................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00

droEre2

GCGTGT---GAAATGTGAAGT-------------------------TGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTACCTCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACT----------------------------GCAAAATTATA	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
.......................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................	21	1	25367.00	543.00	4711.00	450.00	19663.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	1929.00	54.00	668.00	15.00	1192.00
.......................................................................................................TAGCTGCCTTGTGAATGGCTT............................................................	21	1	311.00	5.00	13.00	2.00	291.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................	20	1	278.00	5.00	71.00	0.00	202.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTT............................................................	21	1	235.00	5.00	38.00	5.00	187.00
.......................................................................................................TATCTGCCTTGTGAAGGGCTT............................................................	21	1	185.00	4.00	4.00	1.00	176.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTT............................................................	21	1	172.00	1.00	6.00	0.00	165.00
.......................................................................................................TAGCTTCCTTGTGAAGGGCTT............................................................	21	1	164.00	3.00	2.00	0.00	159.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTT............................................................	21	1	154.00	0.00	6.00	0.00	148.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTT............................................................	21	1	150.00	8.00	33.00	7.00	102.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATT............................................................	21	1	145.00	0.00	6.00	0.00	139.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTT............................................................	21	1	135.00	1.00	15.00	4.00	115.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTT............................................................	21	1	129.00	0.00	2.00	0.00	127.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................	22	1	99.00	1.00	35.00	0.00	63.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................	23	1	79.00	1.00	21.00	0.00	57.00
.......................................................................................................TAGCTGCCTTTTGAAGGGCTT............................................................	21	1	79.00	3.00	7.00	2.00	67.00
.......................................................................................................TACCTGCCTTGTGAAGGGCTT............................................................	21	1	72.00	2.00	3.00	1.00	66.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTT............................................................	21	1	70.00	3.00	58.00	1.00	8.00
.......................................................................................................TAACTGCCTTGTGAAGGGCTT............................................................	21	1	54.00	3.00	4.00	0.00	47.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................	23	1	48.00	0.00	27.00	0.00	21.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTT............................................................	21	1	47.00	0.00	15.00	3.00	29.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCTT............................................................	21	1	39.00	1.00	7.00	0.00	31.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTT............................................................	21	1	39.00	0.00	11.00	2.00	26.00
.......................................................................................................TAGCTGCCTTGTGAAAGGCTT............................................................	21	1	39.00	0.00	18.00	1.00	20.00
........................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................	20	1	39.00	1.00	5.00	0.00	33.00
.......................................................................................................TAGCTGCCTTGTGAAGGG...............................................................	18	1	35.00	0.00	0.00	0.00	35.00
.......................................................................................................TAGCTGCCTTGTGGAGGGCTT............................................................	21	1	35.00	0.00	7.00	0.00	28.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTT............................................................	21	1	33.00	0.00	26.00	2.00	5.00
.......................................................................................................CAGCTGCCTTGTGAAGGGCTT............................................................	21	1	32.00	0.00	6.00	1.00	25.00
..........................................................AGTTTTTCATTTGGCGTGCCTAGC......................................................................................................	24	1	30.00	0.00	1.00	0.00	29.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................	21	1	29.00	0.00	4.00	1.00	24.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................	23	1	27.00	0.00	9.00	0.00	18.00
.......................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................	19	1	26.00	0.00	4.00	0.00	22.00
.......................................................................................................TAGCTGCCTTGTGAAGGCCTT............................................................	21	1	24.00	1.00	5.00	0.00	18.00
.......................................................................................................TAGCTGCCCTGTGAAGGGCTT............................................................	21	1	24.00	1.00	4.00	0.00	19.00
.......................................................................................................TAGCTGCCTTGTGAAGAGCTT............................................................	21	1	23.00	1.00	13.00	0.00	9.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCCT............................................................	21	1	23.00	1.00	1.00	2.00	19.00
.......................................................................................................TAGCTGCCTTGTGAATGGCTTA...........................................................	22	1	23.00	0.00	2.00	1.00	20.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTT............................................................	21	1	23.00	0.00	5.00	0.00	18.00
.......................................................................................................TAGCTGCCTTGTGAACGGCTT............................................................	21	1	22.00	1.00	7.00	0.00	14.00
.......................................................................................................TAGCTGCCTCGTGAAGGGCTT............................................................	21	1	22.00	1.00	4.00	0.00	17.00
.......................................................................................................TAGCTGCTTTGTGAAGGGCTT............................................................	21	1	21.00	1.00	6.00	1.00	13.00
.......................................................................................................TAGCTGCCTTGTGAAGGGTTT............................................................	21	1	21.00	0.00	3.00	0.00	18.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................	22	1	21.00	0.00	2.00	0.00	19.00
.......................................................................................................TAGCTGCCTTGTGAAGCGCTT............................................................	21	1	21.00	2.00	4.00	1.00	14.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTTA...........................................................	22	1	20.00	1.00	12.00	0.00	7.00
.......................................................................................................TGGCTGCCTTGTGAAGGGCTT............................................................	21	1	19.00	1.00	5.00	1.00	12.00
.......................................................................................................TAGCTGCCTTGTGAAGGACTT............................................................	21	1	18.00	0.00	1.00	0.00	17.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTT............................................................	21	1	17.00	2.00	1.00	0.00	14.00
.......................................................................................................TAGCTGCCTTGTCAAGGGCTT............................................................	21	1	17.00	1.00	1.00	1.00	14.00
.......................................................................................................TAGCTGCCTTGTAAAGGGCTT............................................................	21	1	17.00	0.00	5.00	2.00	10.00
.......................................................................................................TAGCTGCCTTATGAAGGGCTT............................................................	21	1	17.00	0.00	4.00	0.00	13.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................	22	1	16.00	0.00	5.00	1.00	10.00
.......................................................................................................TAGTTGCCTTGTGAAGGGCTT............................................................	21	1	14.00	1.00	1.00	0.00	12.00
.......................................................................................................TAGCTGCCTxxTGAAGGGCTT............................................................	19	1	14.00	0.00	0.00	0.00	14.00
.......................................................................................................TAGCTGCCTTCTGAAGGGCTT............................................................	21	1	13.00	2.00	1.00	0.00	10.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTT............................................................	21	1	13.00	2.00	4.00	0.00	7.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTTA...........................................................	22	1	13.00	1.00	6.00	0.00	6.00
.......................................................................................................TATCTGCCTTGTGAAGGGCTTA...........................................................	22	1	12.00	0.00	0.00	0.00	12.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTT............................................................	21	1	12.00	0.00	7.00	1.00	4.00
.......................................................................................................TAGCTGCCTTGTGATGGGCTT............................................................	21	1	12.00	0.00	6.00	0.00	6.00
.......................................................................................................TAGGTGCCTTGTGAAGGGCTT............................................................	21	1	11.00	0.00	0.00	0.00	11.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTTA...........................................................	22	1	11.00	0.00	1.00	0.00	10.00
.......................................................................................................TAGCTGCCTGGTGAAGGGCTT............................................................	21	1	10.00	1.00	9.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................	23	1	10.00	0.00	3.00	0.00	7.00
.......................................................................................................TAGCTGCCTTGAGAAGGGCTT............................................................	21	1	9.00	1.00	4.00	0.00	4.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................	21	1	9.00	1.00	4.00	0.00	4.00
.......................................................................................................GAGCTGCCTTGTGAAGGGCTT............................................................	21	1	9.00	0.00	1.00	2.00	6.00
.......................................................................................................TCGCTGCCTTGTGAAGGGCTT............................................................	21	1	9.00	0.00	0.00	0.00	9.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATTA...........................................................	22	1	9.00	0.00	2.00	0.00	7.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTTA...........................................................	22	1	8.00	0.00	1.00	0.00	7.00
.......................................................................................................TAGCTGCCTTGTGxAGGGCTT............................................................	20	1	8.00	0.00	0.00	1.00	7.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................	21	1	7.00	0.00	5.00	0.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGGCTT.............................................................	20	1	7.00	0.00	0.00	0.00	7.00
.......................................................................................................TAGCTGCCTTGTGAAGGGGTT............................................................	21	1	7.00	1.00	5.00	0.00	1.00
.......................................................................................................TAGCTGCGTTGTGAAGGGCTT............................................................	21	1	7.00	0.00	6.00	0.00	1.00
.......................................................................................................TAGCTGCCTTGTGTAGGGCTT............................................................	21	1	7.00	0.00	6.00	0.00	1.00
.......................................................................................................TAGCTGCCTTGTTAAGTGCTT............................................................	21	1	7.00	0.00	2.00	1.00	4.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTTA...........................................................	22	1	7.00	0.00	0.00	0.00	7.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTTA...........................................................	22	1	7.00	0.00	0.00	0.00	7.00
.......................................................................................................TAGCTTCCTTGTGAAGTGCTT............................................................	21	1	6.00	1.00	0.00	0.00	5.00
.........................................................................................................GCTGCCTTGTGAAGGGCTT............................................................	19	1	6.00	0.00	1.00	0.00	5.00
.......................................................................................................TAGCTGACTTGTGAAGGGATT............................................................	21	1	6.00	0.00	0.00	0.00	6.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................	23	1	6.00	0.00	1.00	0.00	5.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................	24	1	6.00	0.00	4.00	0.00	2.00
.......................................................................................................TAGCTGCCTTTTGAAGGGCTTA...........................................................	22	1	6.00	0.00	2.00	0.00	4.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTTA...........................................................	22	1	6.00	0.00	1.00	0.00	5.00
.......................................................................................................TAGCTGCCTTGTGAATGGCT.............................................................	20	1	5.00	0.00	1.00	0.00	4.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCGT............................................................	21	1	5.00	2.00	2.00	1.00	0.00
.......................................................................................................TAGCTGCCATGTGAAGGGCTT............................................................	21	1	5.00	0.00	0.00	0.00	5.00
.......................................................................................................TAGCGGCCTTGTGAAGGGCTT............................................................	21	1	5.00	0.00	4.00	1.00	0.00
.......................................................................................................TAGCTGGCTTGTGAAGGGCTT............................................................	21	1	5.00	0.00	0.00	2.00	3.00
.......................................................................................................TAGCTGCCTTGTGCCGGGCTT............................................................	21	1	5.00	0.00	5.00	0.00	0.00
.......................................................................................................TAGCTxCCTTGTGAAGGGCTT............................................................	20	1	5.00	0.00	0.00	0.00	5.00
.......................................................................................................TAGCTTCCTTGTGAAGGGCTTA...........................................................	22	1	5.00	0.00	0.00	0.00	5.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTTA...........................................................	22	1	5.00	0.00	4.00	0.00	1.00
.......................................................................................................TAGATGCCTTGTGAAGGGATT............................................................	21	1	4.00	0.00	0.00	0.00	4.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTTT...........................................................	22	1	4.00	0.00	4.00	0.00	0.00
.......................................................................................................TAGCTGCCGTGTGAAGGGCTT............................................................	21	1	4.00	1.00	2.00	0.00	1.00
.......................................................................................................TAGCTGCCTTGTTAATGGCTT............................................................	21	1	4.00	0.00	1.00	1.00	2.00
..........................................................AGTTTTTCATTTGGCGTGCCTAG.......................................................................................................	23	1	4.00	0.00	0.00	0.00	4.00

droAna3

ttGTGATAAGAAATGT---CC----TAGGAAGT-------------AATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGACTTT-AAATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACT----------------------------TGCAGAATATG	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
.......................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................	21	1	27675.00	10045.00	14093.00	3458.00	79.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	1525.00	501.00	492.00	527.00	5.00
.......................................................................................................TATCTGCCTTGTGAAGGGCTT............................................................	21	1	563.00	89.00	469.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATT............................................................	21	1	193.00	48.00	131.00	14.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................	21	1	181.00	90.00	90.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................	22	1	181.00	76.00	53.00	52.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTT............................................................	21	1	164.00	52.00	102.00	9.00	1.00
.......................................................................................................TAGCTTCCTTGTGAAGGGCTT............................................................	21	1	162.00	43.00	118.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................	20	1	145.00	3.00	16.00	126.00	0.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTT............................................................	21	1	125.00	44.00	72.00	9.00	0.00
.......................................................................................................TAGCTGCCTTGTGAATGGCTT............................................................	21	1	120.00	36.00	75.00	9.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................	23	1	115.00	31.00	50.00	34.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................	21	1	95.00	52.00	38.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTT............................................................	21	1	91.00	34.00	30.00	27.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................	21	1	82.00	62.00	18.00	2.00	0.00
.......................................................................................................TAACTGCCTTGTGAAGGGCTT............................................................	21	1	81.00	13.00	42.00	25.00	1.00
.......................................................................................................TACCTGCCTTGTGAAGGGCTT............................................................	21	1	79.00	33.00	33.00	13.00	0.00
.......................................................................................................TAGCTGCCTTGAGAAGGGCTT............................................................	21	1	78.00	64.00	6.00	8.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTT............................................................	21	1	74.00	18.00	45.00	11.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTT............................................................	21	1	69.00	28.00	34.00	7.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTT............................................................	21	1	69.00	12.00	42.00	15.00	0.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTT............................................................	21	1	65.00	7.00	43.00	15.00	0.00
.......................................................................................................TAGCTGCCTTGTCAAGGGCTT............................................................	21	1	60.00	47.00	9.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTT............................................................	21	1	49.00	11.00	21.00	17.00	0.00
.......................................................................................................TAGCTGCCTTGTGAACGGCTT............................................................	21	1	48.00	31.00	6.00	11.00	0.00
.......................................................................................................TAGCTGCCTTATGAAGGGCTT............................................................	21	1	48.00	38.00	5.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTAAAGGGCTT............................................................	21	1	48.00	36.00	9.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTT............................................................	21	1	42.00	20.00	3.00	19.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................	22	1	42.00	9.00	15.00	18.00	0.00
.......................................................................................................TAGCTGCCTTGTGGAGGGCTT............................................................	21	1	39.00	12.00	15.00	11.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................	23	1	39.00	12.00	10.00	17.00	0.00
.......................................................................................................TAGCTGCCTCGTGAAGGGCTT............................................................	21	1	37.00	8.00	23.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGCGCTT............................................................	21	1	36.00	5.00	7.00	24.00	0.00
.......................................................................................................TAGCTGCCTTTTGAAGGGCTT............................................................	21	1	36.00	15.00	19.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................	23	1	36.00	7.00	11.00	18.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAAGGCTT............................................................	21	1	36.00	20.00	11.00	5.00	0.00
.......................................................................................................TAGCTGCCTTCTGAAGGGCTT............................................................	21	1	34.00	24.00	5.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGTTT............................................................	21	1	33.00	11.00	16.00	5.00	1.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCTT............................................................	21	1	32.00	9.00	17.00	6.00	0.00
.......................................................................................................TAGCTGCCCTGTGAAGGGCTT............................................................	21	1	31.00	5.00	20.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTT............................................................	21	1	31.00	15.00	3.00	13.00	0.00
.......................................................................................................CAGCTGCCTTGTGAAGGGCTT............................................................	21	1	31.00	9.00	16.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGG...............................................................	18	1	30.00	2.00	23.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTT............................................................	21	1	30.00	1.00	8.00	21.00	0.00
.......................................................................................................TAGCGGCCTTGTGAAGGGCTT............................................................	21	1	25.00	0.00	0.00	25.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................	23	1	24.00	11.00	4.00	9.00	0.00
.......................................................................................................TAGCTGCCTTGTGTAGGGCTT............................................................	21	1	24.00	4.00	5.00	15.00	0.00
........................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................	20	1	24.00	6.00	11.00	7.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGCCTT............................................................	21	1	23.00	5.00	6.00	12.00	0.00
.......................................................................................................TATCTGCCTTGTGAAGGTCTT............................................................	21	1	22.00	7.00	15.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCCT............................................................	21	1	21.00	6.00	8.00	6.00	1.00
.......................................................................................................AAGCTGCCTTGTGAAGGGCTT............................................................	21	1	19.00	8.00	1.00	10.00	0.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTT............................................................	21	1	19.00	3.00	13.00	3.00	0.00
.......................................................................................................TAGCTGCCTxxTGAAGGGCTT............................................................	19	1	18.00	6.00	12.00	0.00	0.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTT............................................................	21	1	17.00	4.00	10.00	3.00	0.00
.......................................................................................................TAGTTGCCTTGTGAAGGGCTT............................................................	21	1	17.00	6.00	10.00	1.00	0.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTT............................................................	21	1	16.00	8.00	5.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGAGCTT............................................................	21	1	15.00	1.00	8.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................	19	1	15.00	0.00	1.00	14.00	0.00
.......................................................................................................GAGCTGCCTTGTGAAGGGCTT............................................................	21	1	15.00	2.00	2.00	11.00	0.00
.......................................................................................................TAGCAGCCTTGTGAAGGGCTT............................................................	21	1	15.00	2.00	2.00	11.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGACTT............................................................	21	1	14.00	3.00	7.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGATGGGCTT............................................................	21	1	14.00	5.00	3.00	6.00	0.00
.......................................................................................................TAGCTGGCTTGTGAAGGGCTT............................................................	21	1	14.00	2.00	2.00	10.00	0.00
.......................................................................................................TAGCTxCCTTGTGAAGGGCTT............................................................	20	1	14.00	6.00	8.00	0.00	0.00
.......................................................................................................TAGATGCCTTGTGAAGGGATT............................................................	21	1	14.00	6.00	8.00	0.00	0.00
.......................................................................................................TAGGTGCCTTGTGAAGGGCTT............................................................	21	1	13.00	5.00	4.00	4.00	0.00
.......................................................................................................TATCTGCCTTGTGAAGGGCTTA...........................................................	22	1	13.00	2.00	8.00	3.00	0.00
.......................................................................................................TGGCTGCCTTGTGAAGGGCTT............................................................	21	1	13.00	9.00	1.00	3.00	0.00
.......................................................................................................TAGCTTCCTTGTGAAGGTCTT............................................................	21	1	12.00	3.00	9.00	0.00	0.00
.......................................................................................................TATCTGCCTTGTGAATGGCTT............................................................	21	1	11.00	1.00	10.00	0.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGATT............................................................	21	1	11.00	2.00	9.00	0.00	0.00
.......................................................................................................TCGCTGCCTTGTGAAGGGCTT............................................................	21	1	9.00	6.00	1.00	2.00	0.00
.......................................................................................................TAGCTGCCTGGTGAAGGGCTT............................................................	21	1	9.00	0.00	1.00	8.00	0.00
.......................................................................................................TATCTTCCTTGTGAAGGGCTT............................................................	21	1	9.00	2.00	7.00	0.00	0.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................	22	1	9.00	2.00	1.00	6.00	0.00
.......................................................................................................TAGCTTCCTTGTGAAGGGCTTA...........................................................	22	1	9.00	3.00	6.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTTA...........................................................	22	1	8.00	1.00	0.00	7.00	0.00
.......................................................................................................TAGCTGCGTTGTGAAGGGCTT............................................................	21	1	8.00	1.00	2.00	5.00	0.00
.......................................................................................................TAGCTGCTTTGTGAAGGGCTT............................................................	21	1	8.00	1.00	5.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATTA...........................................................	22	1	7.00	0.00	5.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................	24	1	7.00	0.00	1.00	6.00	0.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTTA...........................................................	22	1	7.00	2.00	3.00	2.00	0.00
.......................................................................................................TAGCTGCCATGTGAAGGGCTT............................................................	21	1	7.00	4.00	2.00	1.00	0.00
.......................................................................................................TAGATGACTTGTGAAGGGCTT............................................................	21	1	7.00	2.00	3.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTTA...........................................................	22	1	6.00	3.00	2.00	0.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTTA...........................................................	22	1	6.00	1.00	3.00	2.00	0.00
.......................................................................................................GAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	6.00	1.00	1.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAAG.........................................................	24	1	6.00	0.00	3.00	3.00	0.00
.......................................................................................................TATCTGCCTTGTGAAGTGCTT............................................................	21	1	6.00	0.00	6.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTTA...........................................................	22	1	5.00	0.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................	22	1	5.00	1.00	2.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGCTT.............................................................	20	1	5.00	3.00	2.00	0.00	0.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTTA...........................................................	22	1	5.00	0.00	3.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGGTT............................................................	21	1	5.00	0.00	1.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGAGAAGGGCTTA...........................................................	22	1	5.00	4.00	0.00	1.00	0.00
.......................................................................................................TAGCTGCCGTGTGAAGGGCTT............................................................	21	1	5.00	2.00	1.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTTA...........................................................	22	1	5.00	0.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCCTGGTGAACGGCTT............................................................	21	1	5.00	0.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCGT............................................................	21	1	5.00	0.00	0.00	5.00	0.00
.........................................................................................................GCTGCCTTGTGAAGGGCTT............................................................	19	1	5.00	3.00	1.00	1.00	0.00

dp4

GTGAAT--------TCCCGCCACAAA-------AGAGAAACAAATT-----GAATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTG-TTTCTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAACG----------------------------T-AAAGCCGAA	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
.......................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................	21	1	8051.00	3737.00	505.00	3809.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	1102.00	217.00	87.00	798.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................	20	1	169.00	4.00	4.00	161.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................	22	1	88.00	26.00	1.00	61.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTT............................................................	21	1	31.00	2.00	3.00	26.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTT............................................................	21	1	27.00	5.00	2.00	20.00	0.00
.......................................................................................................TAACTGCCTTGTGAAGGGCTT............................................................	21	1	26.00	6.00	4.00	16.00	0.00
..........................................................AGTCTCTCACATGGCTGGTCTAGC......................................................................................................	24	1	19.00	0.00	14.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATT............................................................	21	1	17.00	3.00	1.00	13.00	0.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTT............................................................	21	1	16.00	5.00	3.00	8.00	0.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTT............................................................	21	1	16.00	7.00	1.00	8.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................	23	1	16.00	2.00	1.00	13.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTT............................................................	21	1	16.00	0.00	0.00	16.00	0.00
.......................................................................................................TACCTGCCTTGTGAAGGGCTT............................................................	21	1	15.00	6.00	1.00	8.00	0.00
.......................................................................................................TATCTGCCTTGTGAAGGGCTT............................................................	21	1	15.00	10.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTT............................................................	21	1	15.00	0.00	3.00	12.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGCGCTT............................................................	21	1	14.00	4.00	1.00	9.00	0.00
.......................................................................................................TAGCTGCCTCGTGAAGGGCTT............................................................	21	1	14.00	3.00	2.00	9.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................	19	1	14.00	1.00	0.00	12.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................	23	1	13.00	3.00	0.00	10.00	0.00
........................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................	20	1	13.00	2.00	0.00	11.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGTTT............................................................	21	1	12.00	7.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................	21	1	11.00	4.00	1.00	6.00	0.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTT............................................................	21	1	10.00	4.00	1.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................	23	1	10.00	4.00	0.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGGAGGGCTT............................................................	21	1	10.00	3.00	1.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................	23	1	10.00	2.00	0.00	8.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTT............................................................	21	1	10.00	1.00	2.00	7.00	0.00
.......................................................................................................CAGCTGCCTTGTGAAGGGCTT............................................................	21	1	10.00	8.00	1.00	1.00	0.00
.......................................................................................................TAGCTGCCCTGTGAAGGGCTT............................................................	21	1	9.00	2.00	1.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGAGCTT............................................................	21	1	9.00	2.00	1.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCCT............................................................	21	1	9.00	6.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAAGGCTT............................................................	21	1	9.00	2.00	1.00	6.00	0.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................	22	1	8.00	4.00	0.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGT..............................................................	19	1	8.00	5.00	0.00	3.00	0.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCTT............................................................	21	1	8.00	5.00	1.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................	22	1	7.00	1.00	0.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTT............................................................	21	1	7.00	2.00	1.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGG...............................................................	18	1	7.00	0.00	1.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAATGGCTT............................................................	21	1	7.00	0.00	0.00	7.00	0.00
.......................................................................................................TAGCTGCCTTGTGTAGGGCTT............................................................	21	1	7.00	0.00	5.00	2.00	0.00
.......................................................................................................TAGCTGCCTxxTGAAGGGCTT............................................................	19	1	7.00	7.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGCCTT............................................................	21	1	7.00	1.00	1.00	5.00	0.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTT............................................................	21	1	6.00	2.00	1.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGATGGGCTT............................................................	21	1	6.00	1.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTT............................................................	21	1	6.00	1.00	3.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTTA...........................................................	22	1	5.00	1.00	1.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTTA...........................................................	22	1	5.00	1.00	0.00	4.00	0.00
.......................................................................................................TAGCGGCCTTGTGAAGGGCTT............................................................	21	1	5.00	1.00	1.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTTA...........................................................	22	1	5.00	0.00	0.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAACGGCTT............................................................	21	1	5.00	2.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTCAAGGGCTT............................................................	21	1	5.00	3.00	0.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGCGTAGGGCTT............................................................	21	1	5.00	0.00	1.00	4.00	0.00
..........................................................AGTCTCTCACATGGCTGGTCTAG.......................................................................................................	23	1	5.00	0.00	3.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTTA...........................................................	22	1	4.00	0.00	0.00	4.00	0.00
.......................................................................................................TGGCTGCCTTGTGAAGGGCTT............................................................	21	1	4.00	2.00	0.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................	23	1	4.00	2.00	0.00	2.00	0.00
.......................................................................................................TAGTTGCCTTGTGAAGGGCTT............................................................	21	1	4.00	0.00	2.00	2.00	0.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTT............................................................	21	1	4.00	1.00	0.00	3.00	0.00
.......................................................................................................TAGCTGCCTGGTGAAGGGCTT............................................................	21	1	4.00	0.00	0.00	4.00	0.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTT............................................................	21	1	4.00	0.00	0.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTT............................................................	21	1	4.00	0.00	1.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCGT............................................................	21	1	4.00	0.00	1.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTTA...........................................................	22	1	4.00	0.00	0.00	4.00	0.00
.......................................................................................................TAGCAGCCTTGTGAAGGGCTT............................................................	21	1	4.00	1.00	0.00	3.00	0.00
.......................................................................................................AAGCTGCCTTGTGAAGGGCTT............................................................	21	1	3.00	1.00	0.00	2.00	0.00
.......................................................................................................TAGCTGCTTTGTGAAGGGCTT............................................................	21	1	3.00	2.00	0.00	1.00	0.00
.......................................................................................................TAGCTGCCxTGTGAAGGGCTT............................................................	20	1	3.00	1.00	1.00	1.00	0.00
.......................................................................................................GAGCTGCCTTGTGAAGGGCTT............................................................	21	1	3.00	0.00	0.00	3.00	0.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCTTA...........................................................	23	1	3.00	0.00	0.00	3.00	0.00
..........................................................AGTCTCTCACATGGCTGGTCT.........................................................................................................	21	1	3.00	0.00	0.00	1.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGGGGTT............................................................	21	1	3.00	0.00	1.00	2.00	0.00
.......................................................................................................TAGCTGGCTTGTGAAGGGGTT............................................................	21	1	3.00	0.00	2.00	1.00	0.00
.......................................................................................................TAGCTGCCATGTGAAGGGCTT............................................................	21	1	3.00	2.00	0.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGAGAAGGGCTT............................................................	21	1	3.00	0.00	1.00	2.00	0.00
.......................................................................................................TAGCTxCCTTGTGAAGGGCTT............................................................	20	1	3.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCGTTGTGAAGGGCTT............................................................	21	1	3.00	0.00	2.00	1.00	0.00
.......................................................................................................GAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	3.00	2.00	0.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGCCTTA...........................................................	22	1	3.00	0.00	0.00	3.00	0.00
.........................................................................................................GCTGCCTTGTGAAGGGCTT............................................................	19	1	3.00	0.00	2.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGTAAAGGGCTT............................................................	21	1	3.00	1.00	0.00	2.00	0.00
.......................................................................................................TAGCTTCCTTGTGAAGGGCTT............................................................	21	1	3.00	3.00	0.00	0.00	0.00

droPer1

GTGAAT--------TCCCGCCACAAA-------AGAGAAACAAATT-----GTATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTG-TTTCTAATACTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAACG----------------------------T-AAAGCCGAA	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
.......................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................	21	1	28452.00	10451.00	175.00	4070.00	13752.00	4.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	3115.00	264.00	20.00	766.00	2063.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................	20	1	739.00	27.00	2.00	144.00	563.00	3.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................	22	1	271.00	55.00	0.00	40.00	176.00	0.00
.......................................................................................................TAACTGCCTTGTGAAGGGCTT............................................................	21	1	126.00	46.00	0.00	6.00	74.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTT............................................................	21	1	118.00	9.00	1.00	9.00	99.00	0.00
.......................................................................................................TAGCGGCCTTGTGAAGGGCTT............................................................	21	1	114.00	0.00	0.00	2.00	112.00	0.00
.......................................................................................................TACCTGCCTTGTGAAGGGCTT............................................................	21	1	108.00	86.00	0.00	0.00	22.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTT............................................................	21	1	104.00	1.00	3.00	25.00	75.00	0.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTT............................................................	21	1	90.00	1.00	1.00	5.00	83.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTT............................................................	21	1	87.00	1.00	0.00	10.00	76.00	0.00
........................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................	20	1	84.00	5.00	0.00	11.00	68.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGCGCTT............................................................	21	1	81.00	0.00	0.00	3.00	78.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTT............................................................	21	1	79.00	8.00	0.00	5.00	66.00	0.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTT............................................................	21	1	66.00	10.00	0.00	2.00	54.00	0.00
.......................................................................................................TATCTGCCTTGTGAAGGGCTT............................................................	21	1	59.00	42.00	0.00	0.00	17.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTT............................................................	21	1	59.00	3.00	0.00	7.00	49.00	0.00
.......................................................................................................TAGCTGCCTGGTGAAGGGCTT............................................................	21	1	57.00	2.00	0.00	2.00	53.00	0.00
.......................................................................................................TAGCTGCCTTGTGGAGGGCTT............................................................	21	1	53.00	11.00	0.00	8.00	34.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTT............................................................	21	1	52.00	6.00	0.00	6.00	40.00	0.00
.......................................................................................................CAGCTGCCTTGTGAAGGGCTT............................................................	21	1	52.00	13.00	1.00	3.00	35.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................	19	1	51.00	1.00	0.00	15.00	34.00	1.00
.......................................................................................................TAGCAGCCTTGTGAAGGGCTT............................................................	21	1	50.00	0.00	0.00	3.00	47.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................	23	1	50.00	3.00	0.00	12.00	35.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTT............................................................	21	1	48.00	8.00	0.00	8.00	32.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATT............................................................	21	1	46.00	6.00	1.00	11.00	28.00	0.00
.......................................................................................................AAGCTGCCTTGTGAAGGGCTT............................................................	21	1	46.00	14.00	0.00	5.00	27.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................	23	1	45.00	2.00	0.00	12.00	31.00	0.00
.......................................................................................................TAGCTGCCTTGTGAATGGCTT............................................................	21	1	45.00	14.00	0.00	5.00	26.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGG...............................................................	18	1	41.00	7.00	0.00	7.00	27.00	0.00
.......................................................................................................TAGCTGCCTTGTGAACGGCTT............................................................	21	1	41.00	4.00	0.00	2.00	35.00	0.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTT............................................................	21	1	40.00	0.00	0.00	1.00	39.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................	23	1	38.00	12.00	0.00	10.00	16.00	0.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTT............................................................	21	1	37.00	5.00	0.00	22.00	10.00	0.00
.......................................................................................................TAGCTGCGTTGTGAAGGGCTT............................................................	21	1	37.00	0.00	0.00	0.00	37.00	0.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCTT............................................................	21	1	36.00	5.00	1.00	5.00	25.00	0.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTT............................................................	21	1	36.00	8.00	0.00	4.00	24.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGCCTT............................................................	21	1	36.00	3.00	1.00	2.00	30.00	0.00
.......................................................................................................TAGCTGCCTCGTGAAGGGCTT............................................................	21	1	35.00	9.00	0.00	5.00	21.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................	22	1	34.00	0.00	0.00	5.00	29.00	0.00
.......................................................................................................TAGCTGCCTTGTGTAGGGCTT............................................................	21	1	33.00	1.00	0.00	3.00	29.00	0.00
.......................................................................................................TAGCTGCCCTGTGAAGGGCTT............................................................	21	1	32.00	12.00	0.00	3.00	17.00	0.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTT............................................................	21	1	32.00	3.00	0.00	5.00	24.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAAGGCTT............................................................	21	1	30.00	12.00	1.00	6.00	11.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGAGCTT............................................................	21	1	29.00	3.00	1.00	3.00	22.00	0.00
.......................................................................................................TAGCTGCCTTGTGATGGGCTT............................................................	21	1	29.00	0.00	0.00	4.00	25.00	0.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................	22	1	29.00	7.00	0.00	5.00	17.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................	21	1	28.00	2.00	0.00	4.00	22.00	0.00
.......................................................................................................TAGCTGCCTTGTAAAGGGCTT............................................................	21	1	27.00	7.00	0.00	2.00	18.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGGTT............................................................	21	1	26.00	0.00	0.00	3.00	23.00	0.00
.......................................................................................................TAGCTGCCGTGTGAAGGGCTT............................................................	21	1	24.00	1.00	0.00	1.00	22.00	0.00
.......................................................................................................TAGCTGCTTTGTGAAGGGCTT............................................................	21	1	24.00	2.00	0.00	5.00	17.00	0.00
.......................................................................................................GAGCTGCCTTGTGAAGGGCTT............................................................	21	1	24.00	0.00	0.00	0.00	24.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGACTT............................................................	21	1	22.00	3.00	0.00	5.00	14.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCCT............................................................	21	1	22.00	3.00	0.00	3.00	16.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGTGCTT............................................................	21	1	21.00	0.00	0.00	1.00	20.00	0.00
..........................................................AGTCTCTCACATGGCTGGGCTAGC......................................................................................................	24	1	20.00	0.00	1.00	0.00	0.00	19.00
.......................................................................................................TAGCTGCCTTGTCAAGGGCTT............................................................	21	1	20.00	5.00	0.00	3.00	12.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGTTT............................................................	21	1	19.00	4.00	0.00	2.00	13.00	0.00
.......................................................................................................TAGCTGCCTTGTGCAGCGCTT............................................................	21	1	19.00	0.00	0.00	1.00	18.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCGT............................................................	21	1	19.00	1.00	0.00	2.00	16.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTTA...........................................................	22	1	18.00	0.00	0.00	5.00	13.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTTA...........................................................	22	1	18.00	0.00	0.00	2.00	16.00	0.00
.......................................................................................................TAGCGGCCTTGGGAAGGGCTT............................................................	21	1	18.00	0.00	0.00	0.00	18.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTTA...........................................................	22	1	17.00	0.00	0.00	1.00	16.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................	23	1	16.00	3.00	0.00	4.00	9.00	0.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTT............................................................	21	1	15.00	2.00	0.00	7.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGT..............................................................	19	1	15.00	9.00	0.00	2.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................	21	1	15.00	0.00	0.00	2.00	13.00	0.00
.......................................................................................................TAGCTGCCTGGTGAAGGGCTTA...........................................................	22	1	13.00	0.00	0.00	0.00	13.00	0.00
.......................................................................................................TAGCTGCCTTGAGAAGGGCTT............................................................	21	1	13.00	0.00	0.00	1.00	12.00	0.00
.......................................................................................................TAGCTTCCTTGTGAAGGGCTT............................................................	21	1	13.00	9.00	0.00	0.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGTT.............................................................	20	1	12.00	9.00	0.00	0.00	3.00	0.00
.......................................................................................................TCGCTGCCTTGTGAAGGGCTT............................................................	21	1	12.00	2.00	0.00	1.00	9.00	0.00
.......................................................................................................TAACTGCCTTGGGAAGGGCTT............................................................	21	1	12.00	0.00	0.00	1.00	11.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGCGCTTA...........................................................	22	1	12.00	0.00	0.00	1.00	11.00	0.00
.......................................................................................................TAGCTGCCTTATGAAGGGCTT............................................................	21	1	12.00	2.00	0.00	1.00	9.00	0.00
.......................................................................................................TAGCTGCCTTCTGAAGGGCTT............................................................	21	1	12.00	1.00	0.00	2.00	9.00	0.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTTA...........................................................	22	1	11.00	0.00	0.00	1.00	10.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTTA...........................................................	22	1	11.00	0.00	1.00	0.00	10.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................	21	1	11.00	1.00	0.00	1.00	9.00	0.00
.......................................................................................................TAGGTGCCTTGTGAAGGGCTT............................................................	21	1	11.00	1.00	0.00	0.00	10.00	0.00
..........................................................AGTCTCTCACATGGCTGGTCTAGC......................................................................................................	24	1	11.00	0.00	9.00	0.00	2.00	0.00
.......................................................................................................TAGTTGCCTTGTGAAGGGCTT............................................................	21	1	11.00	1.00	0.00	5.00	5.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTTA...........................................................	22	1	10.00	0.00	0.00	2.00	8.00	0.00
.......................................................................................................TGGCTGCCTTGTGAAGGGCTT............................................................	21	1	10.00	1.00	0.00	2.00	7.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................	23	1	10.00	1.00	1.00	2.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................	22	1	10.00	1.00	0.00	1.00	8.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATTA...........................................................	22	1	9.00	0.00	0.00	5.00	4.00	0.00
.......................................................................................................TAGCTGCCTTTTGAAGGGCTT............................................................	21	1	9.00	1.00	0.00	1.00	7.00	0.00
.......................................................................................................TAGCTGCGTGGTGAAGGGCTT............................................................	21	1	9.00	0.00	0.00	1.00	8.00	0.00
........................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................	21	1	9.00	0.00	0.00	4.00	5.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTTA...........................................................	22	1	9.00	0.00	0.00	1.00	8.00	0.00
.......................................................................................................TAGCAGCCTGGTGAAGGGCTT............................................................	21	1	9.00	0.00	0.00	1.00	8.00	0.00
.......................................................................................................TAGCTGCCTTGCGACGGGCTT............................................................	21	1	8.00	0.00	0.00	0.00	8.00	0.00
.......................................................................................................TAGCTGGCTTGTGAAGGGCTT............................................................	21	1	8.00	0.00	0.00	1.00	7.00	0.00
.......................................................................................................TAGCGGCCTTGTGAGGGGCTT............................................................	21	1	8.00	0.00	0.00	1.00	7.00	0.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTTA...........................................................	22	1	8.00	0.00	0.00	4.00	4.00	0.00
.......................................................................................................TAGCGGCCTTGTGAAGGGCTTA...........................................................	22	1	8.00	0.00	0.00	1.00	7.00	0.00
.......................................................................................................TAGCGGACTTGTGAAGGGCTT............................................................	21	1	8.00	0.00	0.00	0.00	8.00	0.00
.......................................................................................................TAGCTGCCTGGTGAACGGCTT............................................................	21	1	8.00	0.00	0.00	0.00	8.00	0.00

droWil1

GCGGTT---TATGGTCCAGCT-------------------------ACATTATACATTCATTTCTCATTTAATTCCAC---TTCACTGTTTTA---------------------TCAAGCCA---TATCCTAATCTGGTtTtTtg-----tTtgGTtTtttTtTGtTGgtTtTGTtTtttTTTt	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
................................................................................................................................................G-----TTTGGTTCTATTTTGTTGGT..............	21	1	224.00	15.00	206.00	3.00	0.00
................................................................................................................................................G-----TTTGGTTCTATTTTGTTGG...............	20	1	98.00	18.00	80.00	0.00	0.00
................................................................................................................................................G-----TTTGGTTCTATTTTGTT.................	18	1	55.00	0.00	54.00	1.00	0.00
.......................................................................................................................................................TTGGTTCTATTTTGTTGGT..............	19	1	46.00	3.00	40.00	3.00	0.00
................................................................................................................................................G-----TTTGGTTCTATTTTGTTGGTT.............	22	1	45.00	3.00	41.00	1.00	0.00
................................................................................................................................................G-----TTTGGTTCTATTTTGTTG................	19	1	33.00	4.00	28.00	1.00	0.00
.......................................................................................................................................................TTGGTTCTATTTTGTTGG...............	18	1	23.00	0.00	23.00	0.00	0.00
................................................................................................................................................G-----TTTGGTTCTATTTTGTTGGTTT............	23	1	16.00	0.00	16.00	0.00	0.00
......................................................................................................................................................TTTGGTTCTATTTTGTTGGT..............	20	1	14.00	1.00	13.00	0.00	0.00
......................................................................................................................................................TTTGGTTCTATTTTGTTGG...............	19	1	14.00	7.00	7.00	0.00	0.00
........................................................................................................................................................TGGTTCTATTTTGTTGGT..............	18	1	6.00	0.00	6.00	0.00	0.00
.......................................................................................................................................................TTGGTTCTATTTTGTTGGTT.............	20	1	4.00	2.00	2.00	0.00	0.00
......................................................................................................................................................TTTGGTTCTATTTTGTTGGTT.............	21	1	3.00	1.00	2.00	0.00	0.00
............................................................................................................................................................TTTTTTTTGTTGGTTTTGCA........	20	1	2.00	0.00	0.00	0.00	2.00
......................................................................................................................................................TTTGGTTCTATTTTGTTG................	18	1	2.00	0.00	2.00	0.00	0.00
...............................................................................................................................................AT-----TTTGGTTTTTTTTTGT..................	18	3	0.67	0.00	0.67	0.00	0.00
..........................................................................................................................................TTTTTGG-----TTTGGTTTTTGTT.....................	20	3	0.33	0.33	0.00	0.00	0.00
..............................................................................................................................................................TTTTTTGTTGGTTTTTTTGTTTTTT.	25	1	1.00	0.00	1.00	0.00	0.00
.........................................................................................................................................................TGTTTTTTTTTGTTTGTTTTGTTTTT.....	26	1	1.00	0.00	0.00	1.00	0.00
...........................................................................................................................................................TTTTTTTTTGTTTGTTTTGTTTTTT....	25	6	0.17	0.00	0.17	0.00	0.00
......................................................................................................................................................TTTGGTTCTATTTTGTTGGTTT............	22	1	1.00	0.00	1.00	0.00	0.00
......................................................................................................................................................TTTTGTTTTTTTTTGCTG................	18	4	0.25	0.00	0.00	0.00	0.25
.................................................................................................................................................................TTTGTTGTTGTTGTTTTT.....	18	6	0.17	0.00	0.17	0.00	0.00
.............................................................................................................................................................TTTTTTTGTTGGTTTTTTTGTTT....	23	2	0.50	0.50	0.00	0.00	0.00
........................................................................................................................................................TGGTTCTATTTTGTTGGTTT............	20	1	1.00	1.00	0.00	0.00	0.00
.................................................................................................................................................................GTTGTTGTTTTTGTTTTT.....	18	4	0.25	0.00	0.25	0.00	0.00
.............................................................................................................................................TTAT-----TTTGGTTTTTTTTTGT..................	20	1	1.00	0.00	1.00	0.00	0.00
..........................................................................................................................................................GTTTTTTTTTGTTAGATT............	18	1	1.00	0.00	1.00	0.00	0.00
...........................................................................................................................................TTTTTG-----TTTTGTTTTTGTT.....................	19	16	0.06	0.06	0.00	0.00	0.00
.......................................................................................................................................................TTGGTTTTGTTTTGTTGTTT.............	20	3	0.33	0.00	0.33	0.00	0.00
...............................................................................................................................................TT-----TTTGGTTGTTTTTTGT..................	18	2	0.50	0.00	0.50	0.00	0.00
............................................................................................................................................................GTTTTTTTGTTGGxTTTGTT........	19	2	0.50	0.50	0.00	0.00	0.00
........................................................................................................................................................TGAGTTTTTTTTGTTGGTT.............	19	1	1.00	0.00	1.00	0.00	0.00
............................................................................................................................................................CTTTTTTTGTTGGTTTTGC.........	19	1	1.00	0.00	0.00	1.00	0.00
..................................................................................................................................................................TTGTTGTTGTTGTTTTTTT...	19	6	0.17	0.00	0.00	0.00	0.17
..........................................................................................................................................................GTTCTATTTTGTTGGTTT............	18	1	1.00	0.00	1.00	0.00	0.00
.........................................................................................................................................................GGTTCTATTTTGTTGGTTT............	19	1	1.00	0.00	1.00	0.00	0.00
............................................................................................................................................TTGTx-----TTTGGTTTTTGTTTGT..................	20	1	1.00	0.00	1.00	0.00	0.00
........................................................................................................................................................TGTTTTTTTTTTGTTTGTTTTGTT........	24	2	0.50	0.00	0.50	0.00	0.00
.........................................................................................................................................................GGTTCTATTTTGTTGGTT.............	18	1	1.00	0.00	1.00	0.00	0.00
.............................................................................................................................................................TTTTTTTGTTGGTTTTGGTGT......	21	1	1.00	0.00	0.00	1.00	0.00
...............................................................................................................................................................TTTTTGTTGGTTTTGTCGTTTTTTT	25	1	1.00	0.00	1.00	0.00	0.00
....................................................................................................................................................................GTTGTTTTTGTTTTGTTT..	18	5	0.20	0.00	0.20	0.00	0.00
.......................................................................................................................................................TTGGTTCTATTTTGTTGGTTT............	21	1	1.00	0.00	1.00	0.00	0.00
..............................................................................................................................................................TTTTTTGTTGGTTTTGGT........	18	3	0.33	0.00	0.33	0.00	0.00
..........................................................................................................................................................TTTTTTTTTTGTTGTTTT............	18	50	0.02	0.00	0.02	0.00	0.00
...........................................................................................................................................................TTTTTTTTTGTTGTTTTTTTTTTT.....	24	18	0.06	0.00	0.06	0.00	0.00
.......................................................................................................................................................TTGGTTTTTTTTTGTTGTT..............	19	4	0.25	0.00	0.25	0.00	0.00
...........................................................................................................................................................CTTTTTTTTGTTGGTTTTGC.........	20	1	1.00	0.00	0.00	1.00	0.00
.......................................................................................................................................................TTGAGTTTTTTTTGTTGGT..............	19	1	1.00	0.00	1.00	0.00	0.00
.................................................................................................................................................................TTTGTTTTTTTTGTTTTT.....	18	51	0.02	0.00	0.02	0.00	0.00
...........................................................................................................................................................TTTTTTTTTGTTxGTTTTGTTGTT.....	23	1	1.00	1.00	0.00	0.00	0.00
.................................................................................................................................................................TTTGTTTGTTTTGTTTTTCTT..	21	1	1.00	0.00	1.00	0.00	0.00
..................................................................................................................................................................TTGTTGGTTTTGTCTTTTTTT.	21	1	1.00	0.00	1.00	0.00	0.00
......................................................................................................................................................................AGGTTTTGATTTTTTTTT	18	1	1.00	0.00	1.00	0.00	0.00
........................................................................................................................................................TGTTTTTTTTTAGTTGGTT.............	19	1	1.00	0.00	0.00	0.00	1.00
................................................................................................................................................................TTTTGTTGTTTTGGTTTTT.....	19	2	0.50	0.00	0.50	0.00	0.00

droVir3

AAATTT---GGA-------CCAAATGTGAGAGC-------------GCATTGCATGTGAGTCCCTCATTTGGCAGGTTTAGCTGCTTTT-AATACGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTTAAACAACT----------------------------T--AAACAACA	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
.......................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................	21	1	7378.00	3433.00	3453.00	450.00	14.00	28.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	473.00	173.00	277.00	15.00	2.00	6.00
.......................................................................................................TGGCTGCCTTGTGAAGGGCTT............................................................	21	1	55.00	2.00	52.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................	22	1	44.00	42.00	1.00	0.00	1.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTT............................................................	21	1	31.00	1.00	30.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTT............................................................	21	1	29.00	8.00	18.00	3.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTT............................................................	21	1	24.00	5.00	14.00	5.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................	22	1	23.00	10.00	13.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTT............................................................	21	1	22.00	3.00	17.00	2.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTT............................................................	21	1	22.00	5.00	15.00	2.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................	23	1	21.00	10.00	11.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTT............................................................	21	1	20.00	0.00	13.00	7.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTT............................................................	21	1	19.00	2.00	16.00	1.00	0.00	0.00
.......................................................................................................TAACTGCCTTGTGAAGGGCTT............................................................	21	1	18.00	5.00	13.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTGGTGAAGGGCTT............................................................	21	1	16.00	0.00	16.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................	21	1	16.00	7.00	4.00	1.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTT............................................................	21	1	16.00	2.00	13.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGATGGGCTT............................................................	21	1	14.00	1.00	13.00	0.00	0.00	0.00
.......................................................................................................TACCTGCCTTGTGAAGGGCTT............................................................	21	1	13.00	9.00	3.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTT............................................................	21	1	13.00	1.00	8.00	4.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................	22	1	13.00	7.00	4.00	1.00	0.00	1.00
.......................................................................................................TAGCTGCCCTGTGAAGGGCTT............................................................	21	1	12.00	2.00	10.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGCGCTT............................................................	21	1	12.00	3.00	8.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGGAGGGCTT............................................................	21	1	12.00	7.00	5.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCCT............................................................	21	1	11.00	4.00	5.00	2.00	0.00	0.00
.......................................................................................................TAGCGGCCTTGTGAAGGGCTT............................................................	21	1	10.00	1.00	8.00	1.00	0.00	0.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCTT............................................................	21	1	10.00	2.00	8.00	0.00	0.00	0.00
.......................................................................................................CAGCTGCCTTGTGAAGGGCTT............................................................	21	1	10.00	2.00	7.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATT............................................................	21	1	9.00	2.00	5.00	0.00	0.00	2.00
..........................................................AGTCCCTCATTTGGCAGGTTTAGC......................................................................................................	24	1	9.00	2.00	4.00	1.00	2.00	0.00
.......................................................................................................TAGCTGCCTTGTGAATGGCTT............................................................	21	1	9.00	1.00	6.00	2.00	0.00	0.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................	22	1	9.00	6.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGACTT............................................................	21	1	8.00	7.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGCCTT............................................................	21	1	8.00	2.00	6.00	0.00	0.00	0.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTT............................................................	21	1	8.00	2.00	6.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAAGGCTT............................................................	21	1	8.00	4.00	3.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTAAAGGGCTT............................................................	21	1	8.00	5.00	1.00	2.00	0.00	0.00
.......................................................................................................TAGCTGGCTTGTGAAGGGCTT............................................................	21	1	8.00	1.00	5.00	2.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................	19	1	7.00	0.00	4.00	0.00	2.00	1.00
.......................................................................................................TAGCTGACTTGTGATGGGCTT............................................................	21	1	7.00	0.00	7.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTCGTGAAGGGCTT............................................................	21	1	7.00	1.00	6.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAACGGCTT............................................................	21	1	7.00	2.00	5.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTT............................................................	21	1	7.00	1.00	6.00	0.00	0.00	0.00
..........................................................AGTCCCTCATTTGGCAGGTTTAG.......................................................................................................	23	1	6.00	0.00	5.00	1.00	0.00	0.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTT............................................................	21	1	6.00	1.00	5.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................	20	1	6.00	2.00	1.00	0.00	1.00	2.00
.......................................................................................................TAGCTGCTTTGTGAAGGGCTT............................................................	21	1	6.00	2.00	3.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTxxTGAAGGGCTT............................................................	19	1	6.00	6.00	0.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTACC.........................................................	24	1	6.00	5.00	0.00	0.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................	23	1	6.00	4.00	2.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGTAGGGCTT............................................................	21	1	5.00	0.00	5.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTTTGAAGGGCTT............................................................	21	1	5.00	0.00	3.00	2.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGTTT............................................................	21	1	5.00	4.00	1.00	0.00	0.00	0.00
.......................................................................................................GAGCTGCCTTGTGAAGGGCTT............................................................	21	1	5.00	1.00	2.00	2.00	0.00	0.00
.......................................................................................................TAGCTGACTGGTGAAGGGCTT............................................................	21	1	5.00	0.00	5.00	0.00	0.00	0.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTT............................................................	21	1	5.00	3.00	2.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGATGGGCTTA...........................................................	22	1	5.00	0.00	4.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGCAGCGCTT............................................................	21	1	4.00	0.00	3.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTTA...........................................................	22	1	4.00	1.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................	23	1	4.00	3.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTATGAAGGGCTT............................................................	21	1	4.00	1.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTTA...........................................................	22	1	4.00	0.00	4.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTTA...........................................................	22	1	4.00	2.00	2.00	0.00	0.00	0.00
.......................................................................................................TGGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	4.00	0.00	4.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGATGGTCTT............................................................	21	1	4.00	0.00	4.00	0.00	0.00	0.00
........................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................	20	1	4.00	2.00	2.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................	21	1	4.00	1.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCC.............................................................	20	1	3.00	0.00	0.00	0.00	1.00	2.00
.......................................................................................................TAGCTGCCGTGGGAAGGGCTT............................................................	21	1	3.00	0.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCAT............................................................	21	1	3.00	3.00	0.00	0.00	0.00	0.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTT............................................................	21	1	3.00	0.00	3.00	0.00	0.00	0.00
.......................................................................................................TATCTGCCTTGTGAAGGGCTT............................................................	21	1	3.00	1.00	1.00	1.00	0.00	0.00
.......................................................................................................TAGCTGCCGTGTGAAGGGCTT............................................................	21	1	3.00	0.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGAGCTT............................................................	21	1	3.00	2.00	1.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTGGTGAACGGCTT............................................................	21	1	3.00	0.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGCAGCCTGGTGAAGGGCTT............................................................	21	1	3.00	0.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGTGCTT............................................................	21	1	3.00	0.00	2.00	1.00	0.00	0.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTTA...........................................................	22	1	3.00	0.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGCCGGGCTT............................................................	21	1	3.00	0.00	3.00	0.00	0.00	0.00
.......................................................................................................TAGTTGCCTTGTGAAGGGCTT............................................................	21	1	3.00	1.00	2.00	0.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTCAAGGGCTT............................................................	21	1	3.00	2.00	0.00	1.00	0.00	0.00
.......................................................................................................TAGGTGACTTGTGAAGGGCTT............................................................	21	1	3.00	0.00	3.00	0.00	0.00	0.00

droMoj3

TTATTT------ATATGAACC-------------------------GCATTGCATGTGAGTCCCTCATTTGGTGCGCTTAGCTGTTTTTCAATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGTTTGTAATACAAC----------------------------------------	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
.......................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................	21	1	20596.00	8158.00	6909.00	4680.00	849.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	2066.00	341.00	967.00	627.00	131.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................	20	1	405.00	30.00	214.00	156.00	5.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................	22	1	184.00	87.00	50.00	46.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................	21	1	154.00	79.00	48.00	27.00	0.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTT............................................................	21	1	137.00	12.00	66.00	54.00	5.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................	22	1	135.00	37.00	25.00	18.00	55.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTT............................................................	21	1	134.00	0.00	37.00	92.00	5.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTT............................................................	21	1	114.00	0.00	31.00	80.00	3.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................	22	1	92.00	32.00	27.00	30.00	3.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................	23	1	75.00	27.00	23.00	21.00	4.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTT............................................................	21	1	70.00	9.00	29.00	32.00	0.00
.......................................................................................................TAACTGCCTTGTGAAGGGCTT............................................................	21	1	68.00	27.00	25.00	14.00	2.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTT............................................................	21	1	56.00	5.00	24.00	23.00	4.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTT............................................................	21	1	54.00	0.00	16.00	38.00	0.00
.......................................................................................................TATCTGCCTTGTGAAGGGCTT............................................................	21	1	43.00	36.00	2.00	4.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................	22	1	42.00	11.00	15.00	15.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCCT............................................................	21	1	39.00	6.00	17.00	16.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTT............................................................	21	1	36.00	8.00	14.00	14.00	0.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTT............................................................	21	1	36.00	4.00	19.00	11.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................	19	1	35.00	3.00	20.00	12.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGG...............................................................	18	1	35.00	3.00	21.00	11.00	0.00
.......................................................................................................TAGCTGCCTTGTGAATGGCTT............................................................	21	1	34.00	11.00	7.00	16.00	0.00
.......................................................................................................TACCTGCCTTGTGAAGGGCTT............................................................	21	1	31.00	24.00	3.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGCGCTT............................................................	21	1	30.00	0.00	16.00	13.00	1.00
.......................................................................................................TAGCTGCCTGGTGAAGGGCTT............................................................	21	1	30.00	0.00	19.00	11.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTT............................................................	21	1	29.00	2.00	20.00	7.00	0.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCTT............................................................	21	1	26.00	4.00	16.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................	23	1	26.00	9.00	9.00	7.00	1.00
.......................................................................................................TAGCTGCCTTGTGTAGGGCTT............................................................	21	1	26.00	1.00	15.00	5.00	5.00
.......................................................................................................TAGCTGCCTTGTGGAGGGCTT............................................................	21	1	25.00	0.00	13.00	9.00	3.00
.......................................................................................................TAGCTGCCTTGTGAACGGCTT............................................................	21	1	25.00	2.00	10.00	13.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATT............................................................	21	1	24.00	5.00	14.00	3.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................	23	1	23.00	8.00	9.00	4.00	2.00
.......................................................................................................TAGCTGCCCTGTGAAGGGCTT............................................................	21	1	23.00	2.00	11.00	9.00	1.00
.......................................................................................................TAGCTGCCTTGTGAGGGGCTTA...........................................................	22	1	22.00	2.00	13.00	7.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................	21	1	21.00	5.00	11.00	5.00	0.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCT.............................................................	21	1	20.00	2.00	11.00	5.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAAGGCTT............................................................	21	1	20.00	7.00	4.00	8.00	1.00
.......................................................................................................CAGCTGCCTTGTGAAGGGCTT............................................................	21	1	20.00	2.00	6.00	11.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGTTT............................................................	21	1	19.00	8.00	5.00	4.00	2.00
.......................................................................................................TAGCTGCCTCGTGAAGGGCTT............................................................	21	1	19.00	5.00	7.00	6.00	1.00
.......................................................................................................TAGCTGCCTTGTCAAGGGCTT............................................................	21	1	19.00	4.00	7.00	8.00	0.00
........................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................	20	1	18.00	5.00	10.00	2.00	1.00
..........................................................AGTCCCTCATTTGGTGCGCTTAGC......................................................................................................	24	1	17.00	0.00	1.00	0.00	16.00
.......................................................................................................TAGCTGCATTGTGAAGGGCTT............................................................	21	1	17.00	2.00	9.00	4.00	2.00
.......................................................................................................TAGCTGCCTTGTGATGGGCTT............................................................	21	1	17.00	1.00	8.00	7.00	1.00
.......................................................................................................TAGCAGCCTTGTGAAGGGCTT............................................................	21	1	15.00	1.00	7.00	6.00	1.00
.......................................................................................................TGGCTGCCTTGTGAAGGGCTT............................................................	21	1	15.00	0.00	6.00	9.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTTC..........................................................	23	1	15.00	4.00	8.00	3.00	0.00
.......................................................................................................TAGCTGCCTTATGAAGGGCTT............................................................	21	1	15.00	2.00	4.00	6.00	3.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTT............................................................	21	1	14.00	6.00	2.00	5.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGGTT............................................................	21	1	14.00	1.00	5.00	6.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGAGCTT............................................................	21	1	14.00	4.00	4.00	6.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCGT............................................................	21	1	14.00	4.00	3.00	5.00	2.00
.......................................................................................................TAGCTGCCTTGTAAAGGGCTT............................................................	21	1	14.00	3.00	4.00	6.00	1.00
.......................................................................................................TAGCTGCCTTGTTAAGTGCTT............................................................	21	1	14.00	0.00	5.00	9.00	0.00
.......................................................................................................TAGCGGCCTTGTGAAGGGCTT............................................................	21	1	14.00	0.00	10.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTTA...........................................................	22	1	13.00	0.00	4.00	9.00	0.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTTA...........................................................	22	1	13.00	0.00	6.00	6.00	1.00
.......................................................................................................TAGCTGCGTTGTGAAGGGCTT............................................................	21	1	13.00	0.00	10.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGCCTT............................................................	21	1	12.00	2.00	7.00	3.00	0.00
.......................................................................................................TAGCTGCCTTTTGAAGGGCTT............................................................	21	1	12.00	4.00	6.00	2.00	0.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTT............................................................	21	1	12.00	1.00	6.00	5.00	0.00
.......................................................................................................TAGCTTCCTTGTGAAGGGCTT............................................................	21	1	12.00	6.00	3.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGACTT............................................................	21	1	12.00	3.00	6.00	2.00	1.00
.......................................................................................................TAGCTGCCTTGTGCCGGGCTT............................................................	21	1	11.00	0.00	0.00	11.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................	21	1	11.00	4.00	3.00	4.00	0.00
.......................................................................................................GAGCTGCCTTGTGAAGGGCTT............................................................	21	1	11.00	1.00	3.00	7.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTATC.........................................................	24	1	10.00	1.00	5.00	4.00	0.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTT............................................................	21	1	9.00	2.00	5.00	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTTA...........................................................	22	1	9.00	1.00	5.00	3.00	0.00
.......................................................................................................AAGCTGCCTTGTGAAGGGCTT............................................................	21	1	9.00	0.00	2.00	7.00	0.00
.......................................................................................................TAGCTGCCTTGTGCAGCGCTT............................................................	21	1	8.00	0.00	4.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTTA...........................................................	22	1	8.00	0.00	2.00	6.00	0.00
.......................................................................................................TAGCTGCTTTGTGAAGGGCTT............................................................	21	1	8.00	1.00	7.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................	23	1	7.00	1.00	3.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTGACGTGCTT............................................................	21	1	7.00	0.00	3.00	2.00	2.00
.......................................................................................................TAGTTGCCTTGTGAAGGGCTT............................................................	21	1	7.00	1.00	3.00	3.00	0.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTTA...........................................................	22	1	7.00	1.00	2.00	4.00	0.00
.........................................................................................................GCTGCCTTGTGAAGGGCTT............................................................	19	1	6.00	0.00	4.00	2.00	0.00
.......................................................................................................TCGCTGCCTTGTGAAGGGCTT............................................................	21	1	6.00	1.00	2.00	3.00	0.00
.......................................................................................................TAGCTGCCTTCTGAAGGGCTT............................................................	21	1	6.00	2.00	3.00	1.00	0.00
.......................................................................................................TAGCTxCCTTGTGAAGGGCTT............................................................	20	1	6.00	6.00	0.00	0.00	0.00
.......................................................................................................TAGCTGGCTTGTGAAGGGCTT............................................................	21	1	6.00	2.00	3.00	1.00	0.00
.......................................................................................................TAGCTGCCTxxTGAAGGGCTT............................................................	19	1	6.00	4.00	1.00	1.00	0.00
.......................................................................................................TAGCGGCCTTGGGAAGGGCTT............................................................	21	1	5.00	0.00	1.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGAGAAGGGCTT............................................................	21	1	5.00	1.00	3.00	1.00	0.00
...........................................................GTCCCTCATTTGGTGCGCTTAGCT.....................................................................................................	24	1	5.00	0.00	1.00	0.00	4.00
.......................................................................................................TAGCTGCCTTGTGAATGGCTTA...........................................................	22	1	5.00	0.00	1.00	3.00	1.00
.......................................................................................................TATCTGCCTTGTGAAGCGCTT............................................................	21	1	5.00	0.00	1.00	4.00	0.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTTA...........................................................	22	1	5.00	0.00	4.00	1.00	0.00
.......................................................................................................TAACTGCCTTGGGAAGGGCTT............................................................	21	1	5.00	0.00	4.00	1.00	0.00
.......................................................................................................TAGCTGCCGTGTGAAGGGCTT............................................................	21	1	5.00	1.00	4.00	0.00	0.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTTA...........................................................	22	1	4.00	1.00	2.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGGGAGGGGCTT............................................................	21	1	4.00	0.00	3.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGTTAACGGCTT............................................................	21	1	4.00	0.00	2.00	2.00	0.00
.......................................................................................................TAGCTGCCTGGTGAAGGGGTT............................................................	21	1	4.00	0.00	4.00	0.00	0.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTT............................................................	21	1	4.00	2.00	1.00	1.00	0.00
.......................................................................................................TAGCTGCCTTGTGAAGGGA..............................................................	19	1	4.00	2.00	2.00	0.00	0.00
.......................................................................................................TAGCTGCCTTGTCAAGGGCTTA...........................................................	22	1	4.00	0.00	3.00	1.00	0.00

droGri2

TTATTT---AAT--TCTGATT----ATGAGAGC-------------GCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTGCTTTTCAATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACT----------------------------GAGGAAAAATA	Size	Hit Count	Total Norm	V109 Male body
.......................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................	21	1	1756.00	1756.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................	22	1	113.00	113.00
.................................................................................................................GAGAAGGGCTTxCGTGTGA....................................................	18	1	34.00	34.00
.......................................................................................................TAGCTGCCTTGTGAAGGCCTT............................................................	21	1	21.00	21.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTT............................................................	21	1	18.00	18.00
.......................................................................................................TAGCTGCCTTGTGAAGGACTT............................................................	21	1	11.00	11.00
.......................................................................................................TATCTGCCTTGTGAAGGGCTT............................................................	21	1	8.00	8.00
.......................................................................................................TACCTGCCTTGTGAAGGGCTT............................................................	21	1	7.00	7.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................	22	1	7.00	7.00
.......................................................................................................TAGCTGCCTTGTGAAGGGTTT............................................................	21	1	5.00	5.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................	23	1	5.00	5.00
.......................................................................................................TAGCTGCCTTGTGAAGCGCTT............................................................	21	1	5.00	5.00
.......................................................................................................TAACTGCCTTGTGAAGGGCTT............................................................	21	1	5.00	5.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTT............................................................	21	1	5.00	5.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTT............................................................	21	1	5.00	5.00
.......................................................................................................CAGCTGCCTTGTGAAGGGCTT............................................................	21	1	5.00	5.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................	23	1	4.00	4.00
.......................................................................................................TAGCTGCCTCGTGAAGGGCTT............................................................	21	1	4.00	4.00
.......................................................................................................TAGCTGCCTTGTGAAGGGATT............................................................	21	1	4.00	4.00
.......................................................................................................TAGCTGCCCTGTGAAGGGCTT............................................................	21	1	4.00	4.00
.......................................................................................................TAGCTGCCTTGTTAAGGGCTT............................................................	21	1	3.00	3.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCCT............................................................	21	1	3.00	3.00
.......................................................................................................TAGCTGGCTTGTGAAGGGCTT............................................................	21	1	3.00	3.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTT............................................................	21	1	3.00	3.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................	23	1	3.00	3.00
.......................................................................................................TAGCTGCCGTGTGAAGGGCTT............................................................	21	1	3.00	3.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................	23	1	3.00	3.00
.......................................................................................................TAGCTGCCTTTTGAAGGGCTT............................................................	21	1	3.00	3.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTT............................................................	21	1	3.00	3.00
.......................................................................................................TAGATGCCTTGTGAAGGGCTT............................................................	21	1	3.00	3.00
.......................................................................................................TAGCTGCCTTGCGAAGGGCTT............................................................	21	1	3.00	3.00
......................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................	22	1	2.00	2.00
.......................................................................................................TAGCTGCCTTGTGGAGGGCTT............................................................	21	1	2.00	2.00
.......................................................................................................TAGCTGCCTxxTGAAGGGCTT............................................................	19	1	2.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGGACTTA...........................................................	22	1	2.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................	20	1	2.00	2.00
.......................................................................................................TAGCTTCCTTGTGAAGGGCTT............................................................	21	1	2.00	2.00
.......................................................................................................TAGCTGCCTTGTCAAGGGCTT............................................................	21	1	2.00	2.00
.......................................................................................................TAGCTGACTTGTGAAGGGCTT............................................................	21	1	2.00	2.00
.......................................................................................................TAGCTGCCTTGTGAAGGCCTTA...........................................................	22	1	1.00	1.00
........................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................	20	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGAGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGTCTTA...........................................................	22	1	1.00	1.00
.......................................................................................................TAGCTGCCATGTGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCGGCCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCTxxTGAAGGGCTTA...........................................................	20	1	1.00	1.00
.......................................................................................................TAGGTGCCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCAGCCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTG............................................................	21	1	1.00	1.00
.......................................................................................................TAGTTGCCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTCCCTTGTGAAGGGCTTA...........................................................	22	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGACGGGCTTA...........................................................	22	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGTAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TCGCTGCCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCATGCGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................	21	1	1.00	1.00
.......................................................................................................TAGCxCCCTTGTGAAGGGCTT............................................................	20	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCTTTGTGAAGGGCTT............................................................	21	1	1.00	1.00
.................................................................................................................GAGAAGGGxTTACGTGTGA....................................................	18	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGGCTCAT..........................................................	23	1	1.00	1.00
.......................................................................................................TAGCTGCCTTATGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................AATCTGCCTTGTGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGAAAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTACCTTGTGAAGGGCTTA...........................................................	22	1	1.00	1.00
.......................................................................................................TAGCTGCCTTxTGAAGGGCTT............................................................	20	1	1.00	1.00
.......................................................................................................TAACTGCCTTGTGAGGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAAGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGCAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGTGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCTTCTGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCxTGTGAAGGGCTT............................................................	20	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGGGAAGGGCTT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCTGCCTTGTGAAGGACCT............................................................	21	1	1.00	1.00
.......................................................................................................TAGCCGCCTTGTGAAGGGCGT............................................................	21	1	1.00	1.00
.......................................................................................................TAACTGCCTTGTGAAGGGCTTA...........................................................	22	1	1.00	1.00
........................................................................................................TGCTGCCTTGTGAAGGGCTT............................................................	20	1	1.00	1.00
.......................................................................................................TAGCTGTCTTGTGAAGGGCTTA...........................................................	22	1	1.00	1.00

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image																			None
UNAFold Image																			None