Possible Orthologs for dme-mir-980

droSim1 - 8 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
57	chrX:118257-118384 -	93.05	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGCCAAATAATA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...........................................................................TAGCTGCCTTGTGAAGGGCTT................................ 21 1 728.00 497.00 170.00 46.00 15.00 ..............................AGTTTTTCATTTGGCGTGGCTAGC.......................................................................... 24 1 82.00 43.00 15.00 3.00 21.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTA............................... 22 1 81.00 67.00 8.00 1.00 5.00 ...........................................................................TAGCTGCCTTGTGAAGGGCT................................. 20 1 18.00 0.00 17.00 1.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGC.................................. 19 1 11.00 0.00 9.00 2.00 0.00 ...........................................................................TAGCTGCCTTGTGACGGGCTT................................ 21 1 7.00 7.00 0.00 0.00 0.00 ..............................AGTTTTTCATTTGGCGTGGCTAG........................................................................... 23 1 6.00 2.00 2.00 1.00 1.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTC................................ 21 1 4.00 0.00 3.00 1.00 0.00 ..............................AGTTTTTCATTTGGCGTGGCTAAC.......................................................................... 24 1 3.00 0.00 1.00 0.00 2.00 ...........................................................................TAGCTGCCTTGTGAAGCGCTT................................ 21 1 3.00 3.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGCGAAGGGCTT................................ 21 1 3.00 2.00 1.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCCT................................ 21 1 2.00 2.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAGC............................. 24 1 2.00 0.00 2.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGCAGGCCTT................................ 21 1 2.00 2.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAGGGGCTT................................ 21 1 2.00 2.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTTAAGGGCTT................................ 21 1 2.00 1.00 1.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCC................................. 20 1 2.00 0.00 2.00 0.00 0.00 ..............................AGTTTTTCATTCGGCGGG................................................................................ 18 2 1.00 0.00 0.50 0.00 0.50 ...........................................................................TAGCTGCCTTGTGAAGTGCTT................................ 21 1 2.00 2.00 0.00 0.00 0.00 ..............................AGTTTTTCATTTGGCGTGGCTAA........................................................................... 23 1 2.00 0.00 0.00 0.00 2.00 ...........................................................................TAGCTGCCTTGTGCAGGGCTT................................ 21 1 2.00 2.00 0.00 0.00 0.00 ..............................AGTTTTTCATTTGGCGTGGCT............................................................................. 21 1 2.00 0.00 2.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTTAAGGGCT................................. 20 1 2.00 0.00 0.00 2.00 0.00 ...........................................................................TAGCTGCCTTGTGTTGGGCTTA............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..............................AGTTTTTCATTTTGCGTGGCTATC.......................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 ....................................TCATTTGGCGTGGCTAAC.......................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 ...........................................................................TAGCTGCATTGTGAAGGGCTTA............................... 22 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCG................................. 20 1 1.00 0.00 1.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGATGGGCTTA............................... 22 1 1.00 0.00 0.00 0.00 1.00 ..............................AGTTTTTCATTTGGCGTGGCTAGG.......................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 ..............................AGTTTTCCATTTGGCGTGGCTAGC.......................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGGGAAGGGCGT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCCTGTGAAGGGCTT................................ 21 1 1.00 0.00 1.00 0.00 0.00 ...........................................................................TAGCTGCCGTGTGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTG................................ 21 1 1.00 0.00 1.00 0.00 0.00 ...........................................................................TAGCTGCCGTGTGAAGGGTTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTAAAGGGCTT................................ 21 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................TAGCTGTCTTGTGATGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ..............................AGGTTTTCATTTGGCGTGGCTAGC.......................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................CAGCTGCCTTGTGAAGGGCTTA............................... 22 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCCGCCTTGTGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCCGCCTTGTGAAGGGCTTA............................... 22 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTCTGAAGGGCTT................................ 21 1 1.00 0.00 1.00 0.00 0.00 ...........................................................................TAGCCGCCTTGGGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGTCGCCTTGTGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGGAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCGGCATTGTGAAGGGCTTA............................... 22 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGGTGCCTTGTGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ..............................AGTTTTTCATTTGGCGCTGCTAGC.......................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 ..............................AGTTTTTCATTTGGCGTGGCTCGC.......................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGTGCTTA............................... 22 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAACTGCCTTGTGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAGGGGCTTA............................... 22 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCATTGTGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAG.............................. 23 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAAAGGCTTA............................... 22 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................TAGCTCCCTTGTGAAGGGCT................................. 20 1 1.00 0.00 0.00 1.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGATT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGTAGGGCGT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGACTTGTGAAGGGCGT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTCGTGAAGGGCTT................................ 21 1 1.00 0.00 1.00 0.00 0.00 ..............................AGTTTTTCATTTGGCGTGGC.............................................................................. 20 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTCGCGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGACTTGTGAAGGGCTTA............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..............................CGATTTTCATTTGGCGTGGCTAGC.......................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 ..............................AGATTTTCATTTGGCGTGGCTAGA.......................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGATGTCTTGTGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ....................................TCATTTGGCGTGGCTAGC.......................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 ...........................................................................TAGCTGCCTxxTGAAGGGCT................................. 18 1 1.00 0.00 1.00 0.00 0.00 ...........................................................................TAGCTTCCTTGTGAAGGGCTTA............................... 22 1 1.00 0.00 1.00 0.00 0.00 ..............................AGTTTTTCATTTGGATTGGCTAGC.......................................................................... 24 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................TAGCTGACTTGGGAAGGGCTTA............................... 22 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGACTTGTGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGATGGGGTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGCTTTGTGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TAGCTGTCTTGTGAAGGGCTT................................ 21 1 1.00 0.00 1.00 0.00 0.00 ...........................................................................TAGAGGCCTTGTGAAGGGCTT................................ 21 1 1.00 1.00 0.00 0.00 0.00 ............................................................................AGCTGCCTTGTGAAGGGCTT................................ 20 1 1.00 1.00 0.00 0.00 0.00
22	chrU:2412036-2412170 +	48.0	GCGTGTGAAATACGAAGTT--GATTGTATGTCAGTTTTTCATTT--GGCCTGGCTAGCTTAC-TCCTTTTTAAATATTGC--TAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCC----GAATAATA GCATTTAAAAAATGAAATCACGACGCTCTGTCGTTTTTTTATTCTCGTTCTCTCTACCCTTTTTGCTTACCGAATATGCCGCAAA-G---GCCTGAGAGCTCTATTTTTGATCGCTACCGCGCCTCCAATGCAACAACA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .............................................................................................TGAGAGCTCTxTTCTTGAT........................... 18 1 6.00 0.00 1.00 5.00 0.00 ..................CACGACGCTCTTTCGTTC....................................................................................................... 18 1 1.00 1.00 0.00 0.00 0.00 ............................................................................................CTGAGAGCTCTxTTCTTGA............................ 18 1 1.00 0.00 0.00 0.00 1.00 ..................CACGACGCTCTGCCGTTC....................................................................................................... 18 1 1.00 1.00 0.00 0.00 0.00
37	chr3h_random:762270-762378 -	38.84	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GTG--AGAATCATGTTATCGTTTTTATGTT-GATATACAATTGTTTAAGT-------------TTTACATAATACAAGTTCCCATAAAAATATTTCAACTGTTGTAA---A-AAACAATTAAACAAAA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...........ATGTTATCGTTTTTGTGTC-G................................................................................................ 20 1 1.00 0.00 0.00 0.00 1.00
27	chr2h_random:492042-492146 -	35.99	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATT--GCAGTTCGACTCCCGAATAATA TT-TATGATATATTTATTTCCTCG-------------------------TTTCTGTACTGTTTTCTAAATCGCGTCTATCTTCTCGTGAATCGAATTGGTGTGGCCGTGGGACTCGCGCGCTAAACAACA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .........................................................................GTCTATCTTCTCGCGAATC...................................... 19 1 1.00 0.00 0.00 0.00 1.00 ...............ATTTCCTCG-------------------------TTCCTGTTCTGT..................................................................... 21 1 1.00 0.00 1.00 0.00 0.00
21	chr3R:6967712-6967862 +	34.81	GCGTGTGAAATACGAAGTTGA-----TTGTATGTCAGTTTTTCATTTGGCCTGG-----CT---AGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTC------------------GACTCCCGAATAATA CCTCGAAAGTATAAAAGTTGCGTTCTCGAAACGTGAGGGTCTCAGTTGGTTCCTTCTATCGAGAAACTTTCACA---GCTAAAAATGAAGTCTGGTGGGTGTGAGGTTGAATTCTAATGTTATTTTCCCGTTTGATAACTTATTGATTCACCAA----- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ....................................................................................ATGAAGTCxGGTGGGTCTGA....................................................... 19 1 1.00 0.00 0.00 0.00 1.00 ..............................................................................CTAAAAATGAAGTCTGTTGT............................................................. 20 1 1.00 0.00 0.00 0.00 1.00 .......................................................CTATCGAGAAACTTTCACA---GC................................................................................ 21 1 1.00 1.00 0.00 0.00 0.00 .............................................................................GCTAAAAATGAAGTCTGC................................................................ 18 1 1.00 0.00 0.00 1.00 0.00
10	chr2L:21947764-21947861 +	34.49	GCGTGTGAAATACGAAGTTGATTGTAT-------------------GTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAAT-ATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA ATGCA-----------ACTAAATGCATTACAGTAAAGCACGAAGAAGCCATCTATTTAATTCTTCTAATAAAATTATTTGTTCTTAAAGAAGTGGTCCCTGTTCTGTGA--------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .........................................................AATTCTTxTAATAAAACTAT....................................................................... 19 1 1.00 1.00 0.00 0.00 0.00
40	chr3L:6816344-6816383 -	16.67	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA AAGTGAAGAATCCGTACATCATAATATTGTATCTTAACAT---------------------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...TGAAGAATCCGTACATCATAATA...................................................................................................... 23 1 1.00 0.00 0.00 0.00 1.00
47	chr3L_random:612555-612561 -	2.38	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA TCGCACG------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo	None	None

droSec1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
56	super_10:47183-47310 -	93.05	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGCCAAATAATA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ...........................................................................TAGCTGCCTTGTGAAGGGCTT................................ 21 1 24461.00 6496.00 11016.00 6949.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTA............................... 22 1 2395.00 380.00 1722.00 293.00 ..............................AGTTTTTCATTTGGCGTGGCTAGC.......................................................................... 24 1 955.00 38.00 804.00 113.00 ...........................................................................TAGCTGCCTTGTGAAGGGCT................................. 20 1 117.00 3.00 68.00 46.00 ...........................................................................TAGCTGCCTTGTGAAGGG................................... 18 1 90.00 1.00 78.00 11.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTT............................... 22 1 89.00 45.00 6.00 38.00 ...........................................................................TACCTGCCTTGTGAAGGGCTT................................ 21 1 68.00 42.00 15.00 11.00 ...........................................................................TATCTGCCTTGTGAAGGGCTT................................ 21 1 66.00 31.00 18.00 17.00 ...........................................................................TAGCTGCCTTGTGAAGGGTTT................................ 21 1 65.00 32.00 19.00 14.00 ...........................................................................TAGCTGCCTTGTGAAGGGATT................................ 21 1 64.00 52.00 4.00 8.00 ...........................................................................TAGTTGCCTTGTGAAGGGCTT................................ 21 1 60.00 2.00 55.00 3.00 ...........................................................................TAGCTGCCTTGTGAAGTGCTT................................ 21 1 53.00 1.00 4.00 48.00 ..............................AGTTTTTCATTTGGCGTGGCTAG........................................................................... 23 1 52.00 9.00 38.00 5.00 ...........................................................................TAACTGCCTTGTGAAGGGCTT................................ 21 1 42.00 27.00 10.00 5.00 ...........................................................................TAGCTGCCTTGTGAAGGGCCT................................ 21 1 42.00 10.00 22.00 10.00 ...........................................................................TAGCTGCCTTGTGAAGGGC.................................. 19 1 40.00 2.00 35.00 3.00 ...........................................................................TAGCTGCCTTGCGAAGGGCTT................................ 21 1 40.00 10.00 16.00 14.00 ...........................................................................TAGCTGCCTTGTGAGGGGCTT................................ 21 1 38.00 4.00 23.00 11.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAT.............................. 23 1 37.00 14.00 13.00 10.00 ...........................................................................TAGTTGCCTTGTGAAGGGCTTA............................... 22 1 34.00 0.00 34.00 0.00 ...........................................................................TAGCTGCCTTGTGGAGGGCTT................................ 21 1 34.00 6.00 23.00 5.00 ...........................................................................TAGCTCCCTTGTGAAGGGCTT................................ 21 1 32.00 9.00 15.00 8.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAA.............................. 23 1 32.00 8.00 14.00 10.00 ...........................................................................TAGCTGCCCTGTGAAGGGCTT................................ 21 1 31.00 9.00 14.00 8.00 ...........................................................................TAGCCGCCTTGTGAAGGGCTT................................ 21 1 31.00 13.00 12.00 6.00 ...........................................................................TAGCTGCCTTGTGACGGGCTT................................ 21 1 29.00 12.00 15.00 2.00 ...........................................................................TAGCTGCCTCGTGAAGGGCTT................................ 21 1 28.00 7.00 14.00 7.00 ...........................................................................TAGCTGCCTTGTGAAGGGGTT................................ 21 1 25.00 24.00 0.00 1.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAG.............................. 23 1 24.00 6.00 10.00 8.00 ..........................................................................CTAGCTGCCTTGTGAAGGGCTT................................ 22 1 24.00 3.00 15.00 6.00 ...........................................................................TAGCTGCCTxxTGAAGGGCTT................................ 19 1 22.00 4.00 10.00 8.00 ...........................................................................TAGCTGCCTTGTGAAGTGCTTA............................... 22 1 22.00 0.00 2.00 20.00 ...........................................................................TAGCTGCCTTGTTAAGGGCTT................................ 21 1 20.00 6.00 10.00 4.00 ...........................................................................TGGCTGCCTTGTGAAGGGCTT................................ 21 1 20.00 2.00 8.00 10.00 ..............................AGTTTTTCATTTGGCGTGGCT............................................................................. 21 1 19.00 5.00 6.00 8.00 ...........................................................................TAGCTGCATTGTGAAGGGCTT................................ 21 1 18.00 2.00 3.00 13.00 ...........................................................................TAGCTTCCTTGTGAAGGGCTT................................ 21 1 18.00 7.00 5.00 6.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTC................................ 21 1 17.00 3.00 9.00 5.00 ...........................................................................TAGCTGCTTTGTGAAGGGCTTA............................... 22 1 17.00 0.00 17.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGCCTT................................ 21 1 16.00 8.00 5.00 3.00 ...........................................................................TAGCTGCCTTGTCAAGGGCTT................................ 21 1 16.00 3.00 9.00 4.00 ...........................................................................TAGCTACCTTGTGAAGGGCTT................................ 21 1 15.00 2.00 4.00 9.00 ...........................................................................TAGCTGACTTGTGAAGGGCTT................................ 21 1 15.00 3.00 6.00 6.00 ...........................................................................TAGCTGCCTTGTAAAGGGCTT................................ 21 1 15.00 4.00 8.00 3.00 ...........................................................................CAGCTGCCTTGTGAAGGGCTT................................ 21 1 14.00 2.00 6.00 6.00 ...........................................................................TAGCTGCCTTGTGAATGGCTT................................ 21 1 13.00 0.00 5.00 8.00 ...........................................................................TAGCTGCCTTGTGATGGGCTT................................ 21 1 13.00 1.00 11.00 1.00 ...........................................................................TAGATGCCTTGTGAAGGGCTT................................ 21 1 12.00 5.00 1.00 6.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTTT.............................. 23 1 12.00 8.00 0.00 4.00 ...........................................................................TAGCTxCCTTGTGAAGGGCTT................................ 20 2 6.00 1.50 3.00 1.50 ...........................................................................TAGCTGCCTTGTGAAGGGCAT................................ 21 1 12.00 1.00 2.00 9.00 ...........................................................................TAGCTGCCTTGTGAAAGGCTT................................ 21 1 12.00 2.00 9.00 1.00 ...........................................................................TAGCTGTCTTGTGAAGGGCTTA............................... 22 1 12.00 0.00 12.00 0.00 ...........................................................................TAGCTGTCTTGTGAAGGGCTT................................ 21 1 12.00 1.00 8.00 3.00 ...........................................................................TTGCTGCCTTGTGAAGGGCTT................................ 21 1 11.00 0.00 8.00 3.00 ...........................................................................TAGCTGCTTTGTGAAGGGCTT................................ 21 1 11.00 3.00 6.00 2.00 ...........................................................................TAGCTGCCTTGTGAACGGCTT................................ 21 1 11.00 2.00 6.00 3.00 ...........................................................................TAGCTGCCTTGTGAAGCGCTT................................ 21 1 11.00 3.00 3.00 5.00 ...........................................................................TAGCTCCCTTGTGAAGGGCTTA............................... 22 1 11.00 0.00 11.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTATT............................. 24 1 10.00 5.00 0.00 5.00 ...........................................................................TAGCTGCCTTTTGAAGGGCTT................................ 21 1 10.00 4.00 3.00 3.00 ...........................................................................TAGCTGCCTTGTGAAGAGCTT................................ 21 1 10.00 3.00 6.00 1.00 ............................................................................AGCTGCCTTGTGAAGGGCTT................................ 20 1 10.00 1.00 7.00 2.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAC.............................. 23 1 10.00 5.00 3.00 2.00 ...........................................................................AAGCTGCCTTGTGAAGGGCTT................................ 21 1 9.00 1.00 2.00 6.00 ...........................................................................TAGCTGCCTTCTGAAGGGCTT................................ 21 1 8.00 2.00 2.00 4.00 ...........................................................................TAGCTGCCATGTGAAGGGCTT................................ 21 1 8.00 1.00 5.00 2.00 ...........................................................................TAGCTGCCTTGTGCAGGGCTT................................ 21 1 8.00 4.00 2.00 2.00 ...........................................................................TAGCAGCCTTGTGAAGGGCTT................................ 21 1 7.00 3.00 3.00 1.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTA................................ 21 1 7.00 3.00 3.00 1.00 ...........................................................................TAGCTGCCTTGTGxAGGGCTT................................ 20 1 7.00 1.00 5.00 1.00 ...........................................................................TAGCTGCCTTGTGAAGGACTT................................ 21 1 7.00 3.00 1.00 3.00 ...........................................................................TAGCTGCCTTGTGTAGGGCTT................................ 21 1 6.00 3.00 3.00 0.00 ...............................AGTTTTCATTTGGCGTGGCTAGC.......................................................................... 23 1 6.00 0.00 6.00 0.00 ...........................................................................TAGCTGCCTTGTGAGGGGCTTA............................... 22 1 6.00 0.00 6.00 0.00 ...........................................................................TAGCTGCCTTGAGAAGGGCTT................................ 21 1 6.00 1.00 4.00 1.00 ...........................................................................TAGCTGCCTTGTGAAAGGCTTA............................... 22 1 6.00 0.00 4.00 2.00 ...........................................................................TAGCTGCCTTATGAAGGGCTT................................ 21 1 6.00 0.00 3.00 3.00 ...........................................................................TAGCGGCCTTGTGAAGGGCTT................................ 21 1 6.00 1.00 3.00 2.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTG............................... 22 1 6.00 3.00 2.00 1.00 ...........................................................................TAGCTGCCTTGTGAAGGTCTT................................ 21 1 6.00 2.00 1.00 3.00 ...........................................................................GAGCTGCCTTGTGAAGGGCTT................................ 21 1 6.00 0.00 3.00 3.00 ...........................................................................TAGCTGCCTAGTGAAGGGCTT................................ 21 1 5.00 0.00 3.00 2.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTC............................... 22 1 5.00 2.00 1.00 2.00 ..........................................................................CTAGCTGCCTTGTGAAGGGCTTA............................... 23 1 5.00 1.00 4.00 0.00 ...........................................................................TAGCTGCCTTGTTAAGGGCTTA............................... 22 1 4.00 2.00 2.00 0.00 ..............................AGTTTTTCATTTGGCGTGGCTAGCT......................................................................... 25 1 4.00 0.00 4.00 0.00 ...........................................................................TAGCTGCCTTGCGAAGGGCTTA............................... 22 1 4.00 0.00 4.00 0.00 ..............................AGTTTTTCATTTGGCGTGGCTA............................................................................ 22 1 4.00 0.00 3.00 1.00 ...........................................................................TAGCTGCCTTGTGAAGGGATTA............................... 22 1 4.00 2.00 2.00 0.00 ...........................................................................TAGCTGGCTTGTGAAGGGCTT................................ 21 1 4.00 0.00 1.00 3.00 ...........................................................................TAGCTGCCTTGTGAAGGGTTTA............................... 22 1 4.00 1.00 3.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCCTA............................... 22 1 4.00 1.00 2.00 1.00 ...........................................................................TAGCTGCCTTGTxAAGGGCTT................................ 20 1 3.00 1.00 1.00 1.00 ...........................................................................TGGCTGCCTTGTGAAGGGCTTA............................... 22 1 3.00 0.00 3.00 0.00 .............................................................................GCTGCCTTGTGAAGGGCTT................................ 19 1 3.00 0.00 2.00 1.00 ...........................................................................TAGCTGCCTTCTGAAGGGCTTA............................... 22 1 3.00 0.00 3.00 0.00 ...............................AGTTTTCATTTGGCGTGGCTAG........................................................................... 22 1 3.00 0.00 3.00 0.00 ...........................................................................TACCTGCCTTGTGAAGGGCTTA............................... 22 1 3.00 0.00 2.00 1.00 ...........................................................................TAGCTGCCxTGTGAAGGGCTT................................ 20 1 3.00 0.00 3.00 0.00 ...........................................................................TAGCTGCCTTGTGAATGGCTTA............................... 22 1 3.00 0.00 2.00 1.00
31	super_39:122339-122445 +	38.12	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GATAATTA--------ATTAATTAGGTGTAATATATACATATAACATTCCTTACTTACA--------------TAAAACCATAATGAGAAAGCACTACTTTTATTTGCGCACTTAATGCTCAACAATA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .......................................................TTCA--------------TAAAACCATAATGAGAAGGC................................... 24 1 1.00 0.00 1.00 0.00 ........................................................ACA--------------TAAAACCATAATGAGGAAGCA.................................. 24 1 1.00 0.00 1.00 0.00 .............................................................................................ACTACTTTTATTCGTGCACTT.............. 21 1 1.00 0.00 0.00 1.00 ...............................................................................................TACTTTTATTTGTGCACTTAATGCTC....... 26 1 1.00 0.00 1.00 0.00 ..........................................................................AAAACCATAATGAGAAAG.................................... 18 1 1.00 0.00 1.00 0.00 ............................................................................AACCAGAATGAGAAAGAA.................................. 18 1 1.00 0.00 1.00 0.00 ...............................................................................................TACTTTCATTTGTGCACTTAATG.......... 23 1 1.00 0.00 1.00 0.00 ..........................................................A--------------TAAAACGATAAAGAGAAAG.................................... 20 1 1.00 1.00 0.00 0.00
71	super_86:118389-118393 -	3.17	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA ---------------------------------------------------------------------------------------------------------------------------TAAAA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head	None	None

droYak2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
94	chrX:117050-117182 -	83.34	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTC-----CCGAATAATA GCGTGTGAGATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAGCTTTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCGACTGCCAAATGATA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...........................................................................TAGCTGCCTTGTGAAGGGCTT..................................... 21 1 8709.00 663.00 1835.00 2233.00 3957.00 21.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTA.................................... 22 1 880.00 77.00 177.00 175.00 450.00 1.00 ...........................................................................TAGCTGCCTTGTGAAGGGCT...................................... 20 1 117.00 10.00 35.00 1.00 70.00 1.00 ...........................................................................TAGCTGCCTTGTGACGGGCTT..................................... 21 1 115.00 1.00 17.00 3.00 94.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTT.................................... 22 1 68.00 1.00 16.00 11.00 39.00 1.00 ...........................................................................TAGCTGCCTTGTGCAGGGCTT..................................... 21 1 64.00 2.00 6.00 0.00 56.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGTGCTT..................................... 21 1 51.00 1.00 7.00 6.00 37.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAG................................... 23 1 41.00 0.00 12.00 8.00 21.00 0.00 ...........................................................................TAGCTGCCTTGCGAAGGGCTT..................................... 21 1 32.00 2.00 1.00 1.00 28.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGTCTT..................................... 21 1 32.00 0.00 4.00 0.00 28.00 0.00 ...........................................................................TAGCTGCCTTGTGAGGGGCTT..................................... 21 1 30.00 0.00 3.00 0.00 27.00 0.00 ...........................................................................TAGCTGCCTTGTTAAGGGCTT..................................... 21 1 27.00 0.00 8.00 2.00 17.00 0.00 ...........................................................................TAGCTGCCTTGGGAAGGGCTT..................................... 21 1 24.00 1.00 1.00 0.00 22.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAT................................... 23 1 23.00 0.00 2.00 8.00 13.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGATT..................................... 21 1 20.00 3.00 3.00 3.00 11.00 0.00 ...........................................................................TAGCTGCCTTGTGAATGGCTT..................................... 21 1 20.00 0.00 8.00 2.00 10.00 0.00 ...........................................................................TAGCTGCCTTGTGGAGGGCTT..................................... 21 1 20.00 2.00 4.00 4.00 10.00 0.00 ...........................................................................TAGCTGCCTTGTTAAGTGCTT..................................... 21 1 17.00 0.00 6.00 0.00 11.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTC.................................... 22 1 16.00 0.00 4.00 2.00 10.00 0.00 ..........................................................................CTAGCTGCCTTGTGAAGGGCTT..................................... 22 1 15.00 7.00 1.00 5.00 2.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTG.................................... 22 1 15.00 0.00 3.00 3.00 9.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGGTT..................................... 21 1 14.00 1.00 4.00 0.00 9.00 0.00 ...........................................................................TAGCTGCCTGGTGAAGGGCTT..................................... 21 1 14.00 0.00 4.00 0.00 10.00 0.00 ...........................................................................TAGCGGCCTTGTGAAGGGCTT..................................... 21 1 14.00 0.00 0.00 4.00 10.00 0.00 ...........................................................................TAGCTGCCTTGTGTAGGGCTT..................................... 21 1 14.00 3.00 1.00 0.00 10.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAA................................... 23 1 13.00 0.00 3.00 1.00 9.00 0.00 ...........................................................................TAGCCGCCTTGTGAAGGGCTT..................................... 21 1 13.00 0.00 4.00 5.00 4.00 0.00 ...........................................................................TAGCTGCCTTGTGATGGGCTT..................................... 21 1 13.00 1.00 1.00 0.00 11.00 0.00 ...........................................................................TAACTGCCTTGTGAAGGGCTT..................................... 21 1 12.00 0.00 1.00 3.00 8.00 0.00 ...........................................................................TAGCTGCCTTGTAAAGGGCTT..................................... 21 1 12.00 1.00 5.00 1.00 5.00 0.00 ...........................................................................CAGCTGCCTTGTGAAGGGCTT..................................... 21 1 12.00 0.00 2.00 3.00 7.00 0.00 ...........................................................................TACCTGCCTTGTGAAGGGCTT..................................... 21 1 11.00 0.00 0.00 11.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTTT................................... 23 1 11.00 0.00 2.00 2.00 7.00 0.00 ...........................................................................TAGCTGCCTTGTGACGGGCTTA.................................... 22 1 11.00 0.00 0.00 0.00 11.00 0.00 ...........................................................................TAGCTGACTTGTGAAGGGCTT..................................... 21 1 10.00 3.00 0.00 1.00 6.00 0.00 ...........................................................................TAGCTGCCTTTTGAAGGGCTT..................................... 21 1 10.00 0.00 2.00 1.00 7.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGTGCTTA.................................... 22 1 9.00 0.00 1.00 4.00 4.00 0.00 ...........................................................................TAGCTGCCCTGTGAAGGGCTT..................................... 21 1 9.00 0.00 2.00 2.00 5.00 0.00 ...........................................................................TAGCTACCTTGTGAAGGGCTT..................................... 21 1 9.00 0.00 4.00 2.00 3.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCGT..................................... 21 1 8.00 1.00 4.00 0.00 3.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTC..................................... 21 1 8.00 0.00 1.00 3.00 4.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGG........................................ 18 1 8.00 0.00 4.00 2.00 2.00 0.00 ..............................AGTTTTTCATTTGGCGTGCCTAGC............................................................................... 24 1 8.00 6.00 0.00 1.00 1.00 0.00 ...........................................................................TAGCTGCCTCGTGAAGGGCTT..................................... 21 1 8.00 1.00 1.00 2.00 4.00 0.00 ...........................................................................TAGCTGCCTTGTGCAGGGCTTA.................................... 22 1 8.00 1.00 1.00 0.00 6.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGCGCTT..................................... 21 1 8.00 1.00 1.00 2.00 4.00 0.00 ...........................................................................TAGCTTCCTTGTGAAGGGCTT..................................... 21 1 8.00 0.00 2.00 4.00 2.00 0.00 ...........................................................................TAGCTGCCGTGTGAAGGGCTT..................................... 21 1 7.00 0.00 1.00 0.00 6.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGCCTT..................................... 21 1 7.00 0.00 1.00 2.00 4.00 0.00 ...........................................................................TAGCTGCCTTGTGAACGGCTT..................................... 21 1 7.00 0.00 2.00 0.00 5.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGAGCTT..................................... 21 1 7.00 0.00 3.00 0.00 4.00 0.00 ...........................................................................AAGCTGCCTTGTGAAGGGCTT..................................... 21 1 7.00 0.00 3.00 0.00 4.00 0.00 ...........................................................................TAGCTCCCTTGTGAAGGGCTT..................................... 21 1 6.00 0.00 2.00 0.00 4.00 0.00 ...........................................................................TGGCTGCCTTGTGAAGGGCTT..................................... 21 1 6.00 0.00 1.00 0.00 5.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTG..................................... 21 1 6.00 0.00 2.00 1.00 3.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCCT..................................... 21 1 6.00 0.00 1.00 1.00 4.00 0.00 ...........................................................................TAGCTGCGTTGTGAAGGGCTT..................................... 21 1 6.00 0.00 1.00 0.00 5.00 0.00 ...........................................................................TAGCTGCCTTGTGCCGGGCTT..................................... 21 1 6.00 0.00 1.00 0.00 5.00 0.00 ...........................................................................TAGCTGCCTTGTGAAAGGCTT..................................... 21 1 6.00 0.00 4.00 1.00 1.00 0.00 ............................................................................AGCTGCCTTGTGAAGGGCTT..................................... 20 1 6.00 0.00 3.00 0.00 3.00 0.00 ...........................................................................TAGCTGCCTTGCGTAGGGCTT..................................... 21 1 6.00 0.00 1.00 0.00 5.00 0.00 ...........................................................................TAGCAGCCTTGTGAAGGGCTT..................................... 21 1 5.00 0.00 0.00 0.00 5.00 0.00 ...........................................................................TAGCTGCATTGTGAAGGGCTT..................................... 21 1 5.00 1.00 0.00 0.00 4.00 0.00 ...........................................................................TAGCTGCCTTGTGAGGGGCTTA.................................... 22 1 5.00 0.00 2.00 1.00 2.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGTTT..................................... 21 1 5.00 0.00 0.00 5.00 0.00 0.00 ...........................................................................TAGCTGCCTTGGGAAGGGCTG..................................... 21 1 5.00 1.00 0.00 0.00 4.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTATT.................................. 24 1 5.00 0.00 0.00 3.00 2.00 0.00 ...........................................................................TAGATGCCTTGTGAAGGGCTT..................................... 21 1 5.00 0.00 0.00 1.00 4.00 0.00 ...........................................................................TAGCTGCCTTGTGGAGGGCTTA.................................... 22 1 5.00 2.00 0.00 0.00 3.00 0.00 ...........................................................................TAGCGGCCTTGGGAAGGGCTT..................................... 21 1 5.00 0.00 2.00 0.00 3.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGTCTTA.................................... 22 1 5.00 0.00 0.00 0.00 5.00 0.00 ...........................................................................TATCTGCCTTGTGAAGGGCTT..................................... 21 1 4.00 0.00 1.00 0.00 3.00 0.00 ...........................................................................TAGCGGCCGTGTGAAGGGCTT..................................... 21 1 4.00 0.00 0.00 0.00 4.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAC................................... 23 1 4.00 1.00 0.00 1.00 2.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGACTT..................................... 21 1 4.00 0.00 1.00 1.00 2.00 0.00 ...........................................................................TAGCTGTCTTGTGAAGGGCTT..................................... 21 1 4.00 1.00 1.00 0.00 2.00 0.00 ...........................................................................GAGCTGCCTTGTGAAGGGCTT..................................... 21 1 4.00 0.00 2.00 0.00 2.00 0.00 ...........................................................................TAGCTGCCTTGTGTTGGGCTT..................................... 21 1 4.00 0.00 0.00 0.00 4.00 0.00 ...........................................................................TAGCTGCCTTATGAAGGGCTT..................................... 21 1 4.00 1.00 1.00 0.00 2.00 0.00 ...........................................................................TAGCTGCCTGGTGAGGGGCTT..................................... 21 1 4.00 0.00 0.00 0.00 4.00 0.00 ...........................................................................TAGCTGCCTTGTGACGGGCTTC.................................... 22 1 4.00 0.00 0.00 0.00 4.00 0.00 ...........................................................................TAGCTGCCTTGTCAAGGGCTT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................TAGCTGCCTTGGGTAGGGCTT..................................... 21 1 3.00 0.00 1.00 0.00 2.00 0.00 ...........................................................................TAGCTGCCTTCTGAAGGGCTT..................................... 21 1 3.00 0.00 1.00 0.00 2.00 0.00 ...........................................................................TAGCGGCCTTGTGAGGGGCTT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................TAGCTGCCTTGCGAAGGGCGT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................TAGCTGGCTTGTGAAGGGCTT..................................... 21 1 3.00 0.00 1.00 0.00 2.00 0.00 ...........................................................................TGGCTGCCTTGTGAGGGGCTT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................TAGCGGCCTTGTGGAGGGCTT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................CAGCTGCCTTGTGAAGGGCTTA.................................... 22 1 3.00 0.00 1.00 0.00 2.00 0.00 ...........................................................................TAGCTGCCTTGTGTGGGGCTT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................TAGCTGCCTTGTGACGTGCTT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................TAGCCGCCTTGTGAAGGGCTTA.................................... 22 1 3.00 0.00 0.00 1.00 2.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGC....................................... 19 1 3.00 0.00 1.00 1.00 1.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAAA.................................. 24 1 3.00 0.00 1.00 1.00 1.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGTTCTT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................TCGCTGCCTTGTGAAGGGCTT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................TACCTGCCTTGTGTAGGGCTT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................TAGCTGCCTTGCGGAGGGCTT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................TAGCTGCCTTGTGACGGGCT...................................... 20 1 3.00 0.00 0.00 0.00 3.00 0.00 ...........................................................................TAGCTGCCTTGGGAGGGGCTT..................................... 21 1 3.00 0.00 0.00 0.00 3.00 0.00
36	chrU:13961515-13961521 +	3.17	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA -------------------------------------------------------------------------------------------------------------------------AACGATG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head	None	None

droEre2 - 5 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
14	scaffold_4644:121637-121764 -	89.98	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GCGTGTGAAATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTACCTCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACTGCAAAATTATA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ...........................................................................TAGCTGCCTTGTGAAGGGCTT................................ 21 1 24917.00 543.00 4711.00 0.00 19663.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTA............................... 22 1 1914.00 54.00 668.00 0.00 1192.00 ...........................................................................TAGCTGCCTTGTGAATGGCTT................................ 21 1 309.00 5.00 13.00 0.00 291.00 ...........................................................................TAGCTGCCTTGTGAAGGGCT................................. 20 1 278.00 5.00 71.00 0.00 202.00 ...........................................................................TAGCTGCCTTGTGAAGTGCTT................................ 21 1 230.00 5.00 38.00 0.00 187.00 ...........................................................................TATCTGCCTTGTGAAGGGCTT................................ 21 1 184.00 4.00 4.00 0.00 176.00 ...........................................................................TAGCTGCATTGTGAAGGGCTT................................ 21 1 172.00 1.00 6.00 0.00 165.00 ...........................................................................TAGCTTCCTTGTGAAGGGCTT................................ 21 1 164.00 3.00 2.00 0.00 159.00 ...........................................................................TAGCTGACTTGTGAAGGGCTT................................ 21 1 154.00 0.00 6.00 0.00 148.00 ...........................................................................TAGCTGCCTTGTGAAGGGATT................................ 21 1 145.00 0.00 6.00 0.00 139.00 ...........................................................................TAGCTGCCTTGTGAAGGTCTT................................ 21 1 143.00 8.00 33.00 0.00 102.00 ...........................................................................TAGCTGCCTTGTTAAGGGCTT................................ 21 1 131.00 1.00 15.00 0.00 115.00 ...........................................................................TAGATGCCTTGTGAAGGGCTT................................ 21 1 129.00 0.00 2.00 0.00 127.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTT............................... 22 1 99.00 1.00 35.00 0.00 63.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAG.............................. 23 1 79.00 1.00 21.00 0.00 57.00 ...........................................................................TAGCTGCCTTTTGAAGGGCTT................................ 21 1 77.00 3.00 7.00 0.00 67.00 ...........................................................................TACCTGCCTTGTGAAGGGCTT................................ 21 1 71.00 2.00 3.00 0.00 66.00 ...........................................................................TAGCTGCCTTGTGACGGGCTT................................ 21 1 69.00 3.00 58.00 0.00 8.00 ...........................................................................TAACTGCCTTGTGAAGGGCTT................................ 21 1 54.00 3.00 4.00 0.00 47.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAT.............................. 23 1 48.00 0.00 27.00 0.00 21.00 ...........................................................................TAGCTGCCTTGCGAAGGGCTT................................ 21 1 44.00 0.00 15.00 0.00 29.00 ...........................................................................TAGCCGCCTTGTGAAGGGCTT................................ 21 1 39.00 1.00 7.00 0.00 31.00 ............................................................................AGCTGCCTTGTGAAGGGCTT................................ 20 1 39.00 1.00 5.00 0.00 33.00 ...........................................................................TAGCTGCCTTGTGAAAGGCTT................................ 21 1 38.00 0.00 18.00 0.00 20.00 ...........................................................................TAGCTGCCTTGTGAGGGGCTT................................ 21 1 37.00 0.00 11.00 0.00 26.00 ...........................................................................TAGCTGCCTTGTGAAGGG................................... 18 1 35.00 0.00 0.00 0.00 35.00 ...........................................................................TAGCTGCCTTGTGGAGGGCTT................................ 21 1 35.00 0.00 7.00 0.00 28.00 ...........................................................................TAGCTGCCTTGTGCAGGGCTT................................ 21 1 31.00 0.00 26.00 0.00 5.00 ...........................................................................CAGCTGCCTTGTGAAGGGCTT................................ 21 1 31.00 0.00 6.00 0.00 25.00 ..............................AGTTTTTCATTTGGCGTGCCTAGC.......................................................................... 24 1 30.00 0.00 1.00 0.00 29.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTC................................ 21 1 28.00 0.00 4.00 0.00 24.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAA.............................. 23 1 27.00 0.00 9.00 0.00 18.00 ...........................................................................TAGCTGCCTTGTGAAGGGC.................................. 19 1 26.00 0.00 4.00 0.00 22.00 ...........................................................................TAGCTGCCTTGTGAAGGCCTT................................ 21 1 24.00 1.00 5.00 0.00 18.00 ...........................................................................TAGCTGCCCTGTGAAGGGCTT................................ 21 1 24.00 1.00 4.00 0.00 19.00 ...........................................................................TAGCTGCCTTGTGAAGAGCTT................................ 21 1 23.00 1.00 13.00 0.00 9.00 ...........................................................................TAGCTACCTTGTGAAGGGCTT................................ 21 1 23.00 0.00 5.00 0.00 18.00 ...........................................................................TAGCTGCCTTGTGAACGGCTT................................ 21 1 22.00 1.00 7.00 0.00 14.00 ...........................................................................TAGCTGCCTCGTGAAGGGCTT................................ 21 1 22.00 1.00 4.00 0.00 17.00 ...........................................................................TAGCTGCCTTGTGAATGGCTTA............................... 22 1 22.00 0.00 2.00 0.00 20.00 ...........................................................................TAGCTGCCTTGTGAAGGGTTT................................ 21 1 21.00 0.00 3.00 0.00 18.00 ..........................................................................CTAGCTGCCTTGTGAAGGGCTT................................ 22 1 21.00 0.00 2.00 0.00 19.00 ...........................................................................TAGCTGCCTTGTGAAGGGCCT................................ 21 1 21.00 1.00 1.00 0.00 19.00 ...........................................................................TAGCTGCTTTGTGAAGGGCTT................................ 21 1 20.00 1.00 6.00 0.00 13.00 ...........................................................................TAGCTGCCTTGTGAAGTGCTTA............................... 22 1 20.00 1.00 12.00 0.00 7.00 ...........................................................................TAGCTGCCTTGTGAAGCGCTT................................ 21 1 20.00 2.00 4.00 0.00 14.00 ...........................................................................TGGCTGCCTTGTGAAGGGCTT................................ 21 1 18.00 1.00 5.00 0.00 12.00 ...........................................................................TAGCTGCCTTGTGAAGGACTT................................ 21 1 18.00 0.00 1.00 0.00 17.00 ...........................................................................TAGCTCCCTTGTGAAGGGCTT................................ 21 1 17.00 2.00 1.00 0.00 14.00 ...........................................................................TAGCTGCCTTATGAAGGGCTT................................ 21 1 17.00 0.00 4.00 0.00 13.00 ...........................................................................TAGCTGCCTTGTCAAGGGCTT................................ 21 1 16.00 1.00 1.00 0.00 14.00 ...........................................................................TAGCTGCCTTGTAAAGGGCTT................................ 21 1 15.00 0.00 5.00 0.00 10.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTG............................... 22 1 15.00 0.00 5.00 0.00 10.00 ...........................................................................TAGTTGCCTTGTGAAGGGCTT................................ 21 1 14.00 1.00 1.00 0.00 12.00 ...........................................................................TAGCTGCCTxxTGAAGGGCTT................................ 19 1 14.00 0.00 0.00 0.00 14.00 ...........................................................................TAGCTGCCTTCTGAAGGGCTT................................ 21 1 13.00 2.00 1.00 0.00 10.00 ...........................................................................TAGCTGTCTTGTGAAGGGCTT................................ 21 1 13.00 2.00 4.00 0.00 7.00 ...........................................................................TAGCTGCCTTGTGAAGGTCTTA............................... 22 1 13.00 1.00 6.00 0.00 6.00 ...........................................................................TATCTGCCTTGTGAAGGGCTTA............................... 22 1 12.00 0.00 0.00 0.00 12.00 ...........................................................................TAGCTGCCTTGTGATGGGCTT................................ 21 1 12.00 0.00 6.00 0.00 6.00 ...........................................................................TAGGTGCCTTGTGAAGGGCTT................................ 21 1 11.00 0.00 0.00 0.00 11.00 ...........................................................................TAGCTGCCTTGGGAAGGGCTT................................ 21 1 11.00 0.00 7.00 0.00 4.00 ...........................................................................TAGCTGACTTGTGAAGGGCTTA............................... 22 1 11.00 0.00 1.00 0.00 10.00 ...........................................................................TAGCTGCCTGGTGAAGGGCTT................................ 21 1 10.00 1.00 9.00 0.00 0.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTTT.............................. 23 1 10.00 0.00 3.00 0.00 7.00 ...........................................................................TAGCTGCCTTGAGAAGGGCTT................................ 21 1 9.00 1.00 4.00 0.00 4.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTA................................ 21 1 9.00 1.00 4.00 0.00 4.00 ...........................................................................TCGCTGCCTTGTGAAGGGCTT................................ 21 1 9.00 0.00 0.00 0.00 9.00 ...........................................................................TAGCTGCCTTGTGAAGGGATTA............................... 22 1 9.00 0.00 2.00 0.00 7.00 ...........................................................................TAGCTGCCTTGTTAAGGGCTTA............................... 22 1 8.00 0.00 1.00 0.00 7.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTG................................ 21 1 7.00 0.00 5.00 0.00 2.00 ...........................................................................TAGCTGCCTTGTGAAGGCTT................................. 20 1 7.00 0.00 0.00 0.00 7.00 ...........................................................................TAGCTGCCTTGTGAAGGGGTT................................ 21 1 7.00 1.00 5.00 0.00 1.00 ...........................................................................TAGCTGCGTTGTGAAGGGCTT................................ 21 1 7.00 0.00 6.00 0.00 1.00 ...........................................................................GAGCTGCCTTGTGAAGGGCTT................................ 21 1 7.00 0.00 1.00 0.00 6.00 ...........................................................................TAGCTGCCTTGTGTAGGGCTT................................ 21 1 7.00 0.00 6.00 0.00 1.00 ...........................................................................TAGCTGCATTGTGAAGGGCTTA............................... 22 1 7.00 0.00 0.00 0.00 7.00 ...........................................................................TAGCTGCCTTGTGxAGGGCTT................................ 20 1 7.00 0.00 0.00 0.00 7.00 ...........................................................................TAGATGCCTTGTGAAGGGCTTA............................... 22 1 7.00 0.00 0.00 0.00 7.00 ...........................................................................TAGCTTCCTTGTGAAGTGCTT................................ 21 1 6.00 1.00 0.00 0.00 5.00 .............................................................................GCTGCCTTGTGAAGGGCTT................................ 19 1 6.00 0.00 1.00 0.00 5.00 ...........................................................................TAGCTGACTTGTGAAGGGATT................................ 21 1 6.00 0.00 0.00 0.00 6.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTAC.............................. 23 1 6.00 0.00 1.00 0.00 5.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTATT............................. 24 1 6.00 0.00 4.00 0.00 2.00 ...........................................................................TAGCTGCCTTGTTAAGTGCTT................................ 21 1 6.00 0.00 2.00 0.00 4.00 ...........................................................................TAGCTGCCTTTTGAAGGGCTTA............................... 22 1 6.00 0.00 2.00 0.00 4.00 ...........................................................................TAGCTGTCTTGTGAAGGGCTTA............................... 22 1 6.00 0.00 1.00 0.00 5.00 ...........................................................................TAGCTGCCTTGTGAATGGCT................................. 20 1 5.00 0.00 1.00 0.00 4.00 ...........................................................................TAGCTGCCATGTGAAGGGCTT................................ 21 1 5.00 0.00 0.00 0.00 5.00 ...........................................................................TAGCTGCCTTGTGCCGGGCTT................................ 21 1 5.00 0.00 5.00 0.00 0.00 ...........................................................................TAGCTxCCTTGTGAAGGGCTT................................ 20 1 5.00 0.00 0.00 0.00 5.00 ...........................................................................TAGCTTCCTTGTGAAGGGCTTA............................... 22 1 5.00 0.00 0.00 0.00 5.00 ...........................................................................TAGCTGCCTTGTGACGGGCTTA............................... 22 1 5.00 0.00 4.00 0.00 1.00 ...........................................................................TAGATGCCTTGTGAAGGGATT................................ 21 1 4.00 0.00 0.00 0.00 4.00 ...........................................................................TAGCTGCCTTGTGAAGGTCTTT............................... 22 1 4.00 0.00 4.00 0.00 0.00 ...........................................................................TAGCTGCCGTGTGAAGGGCTT................................ 21 1 4.00 1.00 2.00 0.00 1.00 ...........................................................................TAGCTGCCTTGTGAAGGGCGT................................ 21 1 4.00 2.00 2.00 0.00 0.00 ..............................AGTTTTTCATTTGGCGTGCCTAG........................................................................... 23 1 4.00 0.00 0.00 0.00 4.00 ...........................................................................TAGCGGCCTTGTGAAGGGCTT................................ 21 1 4.00 0.00 4.00 0.00 0.00 ...........................................................................AAGCTGCCTTGTGAAGGGCTT................................ 21 1 4.00 0.00 1.00 0.00 3.00 ...........................................................................TAGCTGCCTTGTGAAGGGCTTC............................... 22 1 4.00 0.00 0.00 0.00 4.00
27	scaffold_4845:432605-432725 -	45.23	GCGTGTGAAATACGAAGTTGATTGTATGTC--AGTTTTTCATTTGGCC---------TGGCTAGCTTACTCCTTTTTAAATAT-TGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GAAACTGGCAAAAAAATTTTAAAATCTGTAATAG------ATTTTACGAGACTATTTTTCCCAAAATACTTCGTTTTGAAAATGTACAGCCAATCGCATCAAGAGCT-------------ATGTAAAATCCCCAATTTTA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head
21	scaffold_4784:24067047-24067187 -	40.4	GCGTGT---GAAATACGAAGTTGATTGTATGTCAGTTTTTC------ATTTG---------GCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GCGTTCGGGGAAATCTGGGAACCCCTTTATGTCCTTTTTCTCTATTGATTCAGCCCGTTTGAGCGCGCCGGCTAACTATAGTCTAGTTAGCTTTATCAACTTAACAAAATTTTAAC----AATAACAAAACAA-TCGCAGATAACA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head
13	scaffold_4644:121465-121679 -	23.12	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- G-------------------------------------------------------------------------------------TGAAGGGCTTACGTGTAATTGTAGTTCGACTGCAAAATTATATATTTTTGATTGTTTGGAATTAAAGAACTACTGCCTATCAAATCGGTATTAATTATTTTGGGTTATCCTGAAAGTTATCAAATATTTCCATTATTATTTATATGCCTTGATTTGAATATTTAACTAGTCAGAATTCTAAGCATCTTGTTTAACTTCAAAGAACAACAGTATA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .........................................................................................................................ATTTATGTATTTTTGATT................................................................................................................................................................. 18 4 409.75 49.25 2.75 0.00 357.75 ...........................................................................................................................TTATGTATTTTTGATTTT............................................................................................................................................................... 18 5 3.40 3.40 0.00 0.00 0.00 ........................................................................................................................AATTTATGTATTTTTGATT................................................................................................................................................................. 19 3 4.00 1.00 0.00 0.00 3.00 .........................................................................................................................ATTTATTTATTTTTGATT................................................................................................................................................................. 18 23 0.22 0.00 0.00 0.00 0.22 .........................................................................................................................ACTTATGTATTTTTGATT................................................................................................................................................................. 18 2 1.00 0.50 0.00 0.00 0.50 .........................................................................................................................ATTTATCTATTTTTGATT................................................................................................................................................................. 18 4 0.25 0.00 0.00 0.00 0.25 .........................................................................................................................ATTTATATATTTTTGATT................................................................................................................................................................. 18 16 0.06 0.06 0.00 0.00 0.00 ........................................................................................................................AATTTATGTATTTTTGAT.................................................................................................................................................................. 18 3 0.33 0.00 0.00 0.00 0.33 ...........................................................................................................................TTATATATTTTTGATTTTA.............................................................................................................................................................. 19 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................................CAATTATGTATTTTTGATT................................................................................................................................................................. 19 1 1.00 0.00 0.00 0.00 1.00
9	scaffold_4845:16268600-16268613 +	7.14	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA ------------------------------------------------------------------------------------------------------------------ACACCGCAGTAAAA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head	None	None

droFic1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
18	scf7180000453927:606437-606509 -	52.38	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA --------------------------------------------CGTGCCTAGCTGACTTCTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGCTCAACT----------- Size Hit Count Total Norm
17	scf7180000453927:606373-606545 -	31.97	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACT-----------------------------------------------------CCCGAATAATA AAGTG---------AAGATAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGACTTCTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGCTCAACTGACTGAGATATATATATCCTTGAATATTCGGGATGAAACGGATAACGCAACGGGCCGGATAAAG Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000409277:495710-495839 -	79.78	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCC-GAAT-AATA GCGTTTGGAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGACCTTTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGGCAGGATAAATG Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
5	scf7180000301760:1131731-1131847 -	77.12	GCG-TGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GCGGTTTCGGCGGCGAGGTTAATCATATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTGTTC-AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGGTTGCGGCTCAACT----------- Size Hit Count Total Norm

droTak1 - 6 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
57	scf7180000415179:121502-121639 -	70.13	GCG---TGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAA-------TAATA GCGGTTTGCAGAATGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCTTGCCTAGCTGACTTCTGTTTAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACTGGCAGGATGTGTGTCCTG Size Hit Count Total Norm
54	scf7180000415121:5715-5833 -	44.77	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTC-----CTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA--- GCTTTTAAATATCTGATTCAGCTATTTAG--------C----GACCCGGCT-GCCAACACCAATTCTTTTTGTTTACATGTCGCCGCCTATGATATAT----CTTAAATTTGGACTCTGTCAACCGAAAAAAGTGG Size Hit Count Total Norm
1	scf7180000410592:17785-17893 +	38.52	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAA---ATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GTGGGTTAAAT--CATTTTAAAGGGGGGTCAATTCTTGATTCGGGACATCCAGTCT---------TAATGTGCACTTTTTGCGACTTTAAGAGAAATTCAATTTTTACGGCAC------TGCCAAA----- Size Hit Count Total Norm
2	scf7180000410621:33075-33218 +	35.85	GCGTGTGAAATACGAAGTTGATTGTAT----GTCAGTTTTT-----------------------------------------------------CATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GTGTGTGT-GTACATAGCAGAGCAAATCATTGTTTGTTTTTGTTTTATACAAATCCAAAGTTTGTCGATAAATCAACATTTGAAAACTAATAAATAGTTTGCTTATCGGGCTTTTGCATT-TTAAAAAACAAAAGCAATTATAAGG--------------------------------------- Size Hit Count Total Norm
21	scf7180000415656:8829-8866 +	17.0	GCGTGTGAAATACGAAGTT--GATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA T-ATTTAAACTCTGAACTCTAAATTTTATGCGAGTTTT-------------------------------------------------------------------------------------------- Size Hit Count Total Norm
49	scf7180000414476:10510-10546 -	13.41	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GC---------GCAATATTTGTTATATAT----------------------------------------------------------------------------------TTTACTTTCACGTCGTC Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
7	scf7180000491011:1178486-1178616 -	78.56	GCGTGTGAAATA-CGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACT--CCCGAATAATA GCATCTGAGAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGACTAGCTGACTTTTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGACTGGGATATAT Size Hit Count Total Norm

droRho1 - 9 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
132	scf7180000779506:958280-958410 -	74.89	GCGTGT---GAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GAATATTTGGGAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGGGCCTAGCTGACTTCTGTTAAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGGCAAGGATAT Size Hit Count Total Norm
96	scf7180000773706:327-463 -	43.85	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTT----TAAATATTGC----------------TAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCA-GTTCGACTCCCGAATAATA AGATAATAATTTTGAGATTTA-----TGTCCAGTGTTTA------CTGGATAATTTATCTCTGTGTTCGTAAA--TTATAAGGCGTGCTTCATTAAAGCTGTCTACTAGAACTTTAGCGTGTTTTTGTATGGTTGTTCCCTGAACATTT Size Hit Count Total Norm
102	scf7180000776783:10508-10607 -	40.29	GC-GTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGC---CTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACG-TGTAATTGCAGTTCGACTCCCGAATAATA GAAGCGTCAAAAACGAT-----------------TCTTAATTTGGTCGTCAGGCTTGA------ATTTATAATTACAGCTTGGTGCGGTAAAAAGTACTTACCTTGTTTCTGCACTTCGACCA---------- Size Hit Count Total Norm
55	scf7180000779985:1176750-1176902 +	37.53	GCGTGTGA-AATACGAAGTTGATTG----------TATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTT-------------------GTGAAG--GGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA ACATATAATAATATAAAATTGGGTATTTAAAATTGGTGATTCCTTTTTTGTGGATCCCCACTAC--AATTCTGACTTAAAGATTATCATCGGTCAGGTTCGAGTAGTTTAAAAATATAAAAGATATTTTCATATAATTG-----CAACCCTCAAAAAAGC Size Hit Count Total Norm
128	scf7180000779250:44253-44311 -	21.66	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GTGTAT-----------------TTTTATAATTTTTGTTTATGTCTTGCATATATCACATTTTTTT----ATTGCAAGCT------------------------------------------------ Size Hit Count Total Norm
78	scf7180000766329:14917-14961 -	19.61	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA TCTTTTACATT-----------------------------------------------------------------------------------TTAATTGTCATGGCAGTTAGTATTGTTCACTTGG Size Hit Count Total Norm
51	scf7180000779588:21552-21579 +	13.79	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA GCCTAGCAAATTC-AGGTTATTTAAATGT--------------------------------------------------------------------------------------------------- Size Hit Count Total Norm
59	scf7180000759871:504-522 -	10.32	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA AAATGGGAAATACGCATTT------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm		None
108	scf7180000776893:17519-17519 -	0.79	GCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAATAATA -------------------------------------------------------------------------------------------------------------------------------A Size Hit Count Total Norm	None	None