dme-mir-957- 12- and 20-way alignments

dme-mir-957	chr3L:22511296-22511391 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 22511310-22511331
   star strand at position 22511355-22511377
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chr3L:22511281-22511406 -	TTATATCC--GTAGTGT------------TGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT--CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGCGAGCATCTATCCAAA
droSim1	chr3L:21812307-21812432 -	TTGTATCC--GTAGTGT------------TGTCCACAATAGACCTTAATTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT--CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAA
droSec1	super_11:2446955-2447080 -	TTGTATCC--GTAGTGT------------TGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT--CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAA
droYak2	chr3L:22973852-22973977 -	TCATATCC--GTAGTGT------------TGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT--ATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCAACTATCCAAA
droEre2	scaffold_4784:22180738-22180863 -	CCATATCC--GTAGTGT------------TGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT--CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAA
droAna3	scaffold_13337:22247673-22247807 -	TAAGATTC--GTAATATAGTAATATATACTGCCTACAATGGCCCTTAGTTTTCGACGTGTTTTGGTGTGCAGGGG-AGTT--CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTA---AAA
dp4	chrXR_group8:186470-186597 -	ACCCACCA--GTAA-----------ATACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT-GATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTAACCttt
droPer1	super_80:80370-80497 +	ACCCACCA--GAAT-----------ATACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT-GATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTAACCttt
droWil1	scaffold_180698:7262482-7262606 +	TCGCATC---ATA----------------TATCCGCAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTTAGGAAGTTTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGTTGTGATAGAAGCAACCATGAAAA
droVir3	scaffold_13049:17242397-17242522 +	tTtTTtTTTCCTAAC-------TAGATAATGCCCACAATGGTTCTTAGTTTTAGACGTGTTTTGGTGTGCTTG-A-AGTT--TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCGATTGT-GAGGTAAAAGCGTCCA------
droMoj3	scaffold_6680:22273689-22273794 +	-----------------------------TGCCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTTGGG-AGTT--TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GAGGCGAAAGCATCCAG-----
droGri2	Unknown	T-----------------------------ACCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTTGGG-AGTT--TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GTGGTAAAAGCATCCATTACAA

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chr3L:22511281-22511406 -	NA	TTATA--TCCG----T--AG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGCGAGCATCTA----TCCAA--------A
droSim1	chr3L:21812307-21812432 -	10	TTGTA--TCCG----T--AG------------TGTTGTCCACAATAGACCTTAATTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTA----TCCAA--------A
droSec1	super_11:2446955-2447080 -	14	TTGTA--TCCG----T--AG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTA----TCCAA--------A
droYak2	chr3L:22973852-22973977 -	28	TCATA--TCCG----T--AG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-ATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCAACTA----TCCAA--------A
droEre2	scaffold_4784:22180738-22180863 -	42	CCATA--TCCG----T--AG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTA----TCCAA--------A
droEug1	scf7180000409801:98857-98979 -	6	CTG---A----TGT--GGAG------------TGTTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGAGAGCATCTG----ACCA----------
droBia1	scf7180000302377:742013-742139 +	33	TCC---C----AGCGTAGAA------------TGATGTCCACAATGAACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-GAATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCGTGAGCATCTA----ACCAA--------A
droTak1	scf7180000415491:455692-455815 -	265	CTA---A----TGT--AGCG------------TGTTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTA----ACCAA---------
droEle1	scf7180000491199:234612-234734 +	6	TTT---A----TAT--AGAG------------TGTTGCCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTA----AC--A--------A
droRho1	scf7180000779133:19458-19582 +	140	TTT---A----AAT--AGAG------------TGTTGCCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCCA----ACCAA--------A
droFic1	scf7180000453830:518566-518689 +	1	TCA---A----AGT--AGAG------------TGTGGCCCGCAATGAACCTTAGTTTTAGACGTGTTTTGGTGTG-TGGGG-AG--CG-ATATTCCGATTGAAACCGTCCAAAACTGAGGCTAACTGT-GAGGCGTGAGCGTCTA----ACCAA--------A
droKik1	scf7180000302808:850777-850909 -	1	TCC---A----TAC--AGAG------------TGATGTCCACAATGAACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCGTCTA----CCAAACCAAGTAAA
droAna3	scaffold_13337:22247678-22247807 -	1	TAAGA--TTCG----T--AATATAGTAATATATACTGCCTACAATGGCCCTTAGTTTTCGACGTGTTTTGGTGTGCAGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATC--------------------
droBip1	scf7180000396426:572728-572849 +	1	ATA----------T--AGAG------------TATTGCCCACAATGGTCCTTAGTTTTCGACGTGTTTTGGTGTGCAGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTA----ACCAA--------C
dp4	chrXR_group8:186470-186597 -	1	ACC---C----ACCAGTAAA------------TACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TTGATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTA----ACCAA--------A
droPer1	super_80:80367-80497 +	1	ACAACCC----ACCAGAATA------------TACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TTGATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTA----ACCAA--------A
droWil1	scaffold_180698:7262478-7262610 +	1	TCT---CT---CGCAT--CA------------TA-TATCCGCAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTTAGGAAGTTTT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGTTGTGATAGAAGCAACCATGAAAACAA--------A
droVir3	scaffold_13049:17242400-17242523 +	1	TTATT--TCCTAAC--TAGA------------TAATGCCCACAATGGTTCTTAGTTTTAGACGTGTTTTGGTGTGCTTG-A-AG--TT-TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCGATTGT-GAGGTAAAAGCGTCCA----A-------------
droMoj3	scaffold_6680:22273688-22273794 +	1	-----------------------------------TGCCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTTGGG-AG--TT-TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GAGGCGAAAGCATCCA----G-------------
droGri2	scaffold_15110:14942014-14942124 -	1	T-----------------------------------ACCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTTGGG-AG--TT-TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GTGGTAAAAGCATCCA----AATAT--------C

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

TTATATCC--GTAGTGT------------TGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT--CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGCGAGCATCTATCCAAA

Size

Hit Count

Total Norm

droSim1

TTGTATCC--GTAGTGT------------TGTCCACAATAGACCTTAATTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT--CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAA	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
............................................................................................TGAAACCGTCCAAAACTGAGGC..............................	22	1	176248.00	120.00	170635.00	3400.00	2093.00
............................................................................................TGAAACCGTCCAAAACTGAGG...............................	21	1	29677.00	9.00	28649.00	912.00	107.00
............................................................................................TGAAACCGTCCAAAACTGAGGCT.............................	23	1	10385.00	0.00	10084.00	268.00	33.00
............................................................................................TGAAACCGTCCAAAACTGA.................................	19	1	5460.00	0.00	5310.00	135.00	15.00
............................................................................................TGAAACCGTCCAAAACTGAG................................	20	1	4621.00	0.00	4485.00	120.00	16.00
............................................................................................TGAAACCGTCCAAAACTGAGAC..............................	22	1	4543.00	0.00	4422.00	68.00	53.00
............................................................................................TGAAACCGTCCAAAACTGAGGCC.............................	23	1	1831.00	0.00	1780.00	44.00	7.00
............................................................................................TGAAACCGTCCAAAACTGAGGCTT............................	24	1	1432.00	0.00	1361.00	63.00	8.00
............................................................................................TGAAACCGTCCAAAACTG..................................	18	1	1085.00	0.00	1051.00	30.00	4.00
............................................................................................TGAAACCGTCCAAAACTGG.................................	19	1	760.00	0.00	735.00	21.00	4.00
............................................................................................TGAAACCGTCCAAAACTGAGGCA.............................	23	1	656.00	1.00	632.00	20.00	3.00
.............................................................................................GAAACCGTCCAAAACTGAGGC..............................	21	1	484.00	0.00	471.00	6.00	7.00
............................................................................................TGAAGCCGTCCAAAACTGAGGC..............................	22	1	382.00	0.00	375.00	4.00	3.00
............................................................................................TGAAACCGTCCAAAACTGAGGCG.............................	23	1	267.00	0.00	253.00	13.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGGT..............................	22	1	264.00	0.00	257.00	5.00	2.00
............................................................................................TGAAACCGTCCAAAACTGAGGG..............................	22	1	223.00	0.00	203.00	11.00	9.00
............................................................................................TGAAACCGTCCAAAGCTGAGGC..............................	22	1	217.00	0.00	211.00	4.00	2.00
............................................................................................TGAAACCGTCCAAAACTGGGGC..............................	22	1	213.00	0.00	204.00	7.00	2.00
............................................................................................TGAAACCGTCCAAGACTGAGGC..............................	22	1	211.00	0.00	198.00	13.00	0.00
............................................................................................TTAAACCGTCCAAAACTGAGGC..............................	22	1	193.00	0.00	186.00	4.00	3.00
............................................................................................TGAAACCGTCCAAAACTGAC................................	20	1	193.00	0.00	187.00	6.00	0.00
............................................................................................TGAAACCGCCCAAAACTGAGGC..............................	22	1	183.00	0.00	176.00	4.00	3.00
............................................................................................TCAAACCGTCCAAAACTGAGGC..............................	22	1	160.00	0.00	152.00	4.00	4.00
..............................................................................................AAACCGTCCAAAACTGAGGC..............................	20	1	158.00	0.00	148.00	4.00	6.00
............................................................................................TGAAACCGGCCAAAACTGAGGC..............................	22	1	144.00	0.00	141.00	0.00	3.00
............................................................................................TAAAACCGTCCAAAACTGAGGC..............................	22	1	137.00	0.00	131.00	3.00	3.00
............................................................................................TGAAACCGTCCAAGACTGAGG...............................	21	1	119.00	0.00	113.00	6.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGA..............................	22	1	112.00	1.00	108.00	2.00	1.00
............................................................................................TGAAACCATCCAAAACTGAGGC..............................	22	1	99.00	0.00	96.00	3.00	0.00
............................................................................................CGAAACCGTCCAAAACTGAGGC..............................	22	1	90.00	0.00	83.00	2.00	5.00
............................................................................................TGGAACCGTCCAAAACTGAGGC..............................	22	1	89.00	0.00	87.00	2.00	0.00
............................................................................................TGAAACCGTCCAAAACTTAGGC..............................	22	1	82.00	0.00	79.00	0.00	3.00
............................................................................................TGAAACCGTCCAAAAATGAGGC..............................	22	1	71.00	1.00	69.00	0.00	1.00
............................................................................................TGAAGCCGTCCAAAACTGAGG...............................	21	1	68.00	0.00	66.00	1.00	1.00
............................................................................................TGAAACCGTCCAAAACTAAGGC..............................	22	1	63.00	0.00	62.00	0.00	1.00
.............................................................................................GAAACCGTCCAAAACTGAGG...............................	20	1	63.00	0.00	62.00	1.00	0.00
............................................................................................TGAAACTGTCCAAAACTGAGGC..............................	22	1	62.00	0.00	61.00	1.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGT...............................	21	1	62.00	0.00	59.00	1.00	2.00
............................................................................................TGAAACCGTCCAAAACTGAGA...............................	21	1	60.00	0.00	58.00	2.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGAA.............................	23	1	59.00	0.00	57.00	2.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCCT............................	24	1	59.00	0.00	57.00	2.00	0.00
............................................................................................TGAAACCGTCCAAAGCTGAGG...............................	21	1	55.00	0.00	54.00	1.00	0.00
............................................................................................TGAGACCGTCCAAAACTGAGGC..............................	22	1	50.00	0.00	50.00	0.00	0.00
............................................................................................TGAAACCGTCCxAAACTGAGGC..............................	21	1	48.00	0.00	46.00	0.00	2.00
............................................................................................TGAAACCGTCAAAAACTGAGGC..............................	22	1	44.00	0.00	43.00	1.00	0.00
............................................................................................TGAAACCGTCCAAAACTGACG...............................	21	1	43.00	0.00	43.00	0.00	0.00
............................................................................................TTAAACCGTCCAAAACTGAGG...............................	21	1	42.00	0.00	41.00	1.00	0.00
............................................................................................TGAAACCGTCCAAAACTCAGGC..............................	22	1	42.00	0.00	41.00	1.00	0.00
............................................................................................AGAAACCGTCCAAAACTGAGGC..............................	22	1	40.00	0.00	36.00	1.00	3.00
............................................................................................TGAAACCGTCCAAAACCGAGGC..............................	22	1	40.00	0.00	38.00	0.00	2.00
............................................................................................TGAAACCGTCTAAAACTGAGGC..............................	22	1	39.00	1.00	38.00	0.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGC...............................	21	1	39.00	0.00	38.00	1.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAA................................	20	1	38.00	0.00	37.00	1.00	0.00
...............................................................................................AACCGTCCAAAACTGAGGC..............................	19	1	37.00	0.00	36.00	0.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAAGC..............................	22	1	35.00	0.00	34.00	0.00	1.00
............................................................................................TGAAACCGTCCAAAACTGTGG...............................	21	1	35.00	0.00	34.00	1.00	0.00
............................................................................................TGAAATCGTCCAAAACTGAGGC..............................	22	1	34.00	0.00	31.00	1.00	2.00
............................................................................................TGAAACCGACCAAAACTGAGGC..............................	22	1	33.00	0.00	31.00	0.00	2.00
............................................................................................TGAAACCGTCCAAAACTGATGC..............................	22	1	30.00	0.00	29.00	0.00	1.00
............................................................................................TGAAACAGTCCAAAACTGAGGC..............................	22	1	29.00	0.00	25.00	1.00	3.00
............................................................................................TGAAACCGTTCAAAACTGAGGC..............................	22	1	28.00	0.00	27.00	1.00	0.00
............................................................................................TCAAACCGTCCAAAACTGAGG...............................	21	1	28.00	0.00	26.00	2.00	0.00
............................................................................................TGAAACCGCCCAAAACTGAGG...............................	21	1	27.00	0.00	25.00	2.00	0.00
...........................................................................................CTGAAACCGTCCAAAACTGAGGC..............................	23	1	26.00	0.00	24.00	0.00	2.00
............................................................................................TGAAACCGTCCAGAACTGAGGC..............................	22	1	26.00	0.00	26.00	0.00	0.00
............................................................................................TGAAACCGTCCAAAACTGTGAC..............................	22	1	25.00	0.00	25.00	0.00	0.00
............................................................................................TGAAACCGTCCAAAACTGT.................................	19	1	24.00	0.00	24.00	0.00	0.00
............................................................................................TGAAGCCGTCCAAAACTGAG................................	20	1	24.00	0.00	22.00	1.00	1.00
..............................................................................................AAACCGTCCAAAACTGAGG...............................	19	1	23.00	0.00	21.00	1.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGGCAT............................	24	1	23.00	0.00	22.00	1.00	0.00
............................................................................................TGAAACCGGCCAAAACTGAGG...............................	21	1	23.00	0.00	21.00	2.00	0.00
............................................................................................TGAAACCGTCCAAAACTGACGC..............................	22	1	22.00	0.00	21.00	0.00	1.00
............................................................................................TGAAACCGTCCAAAATTGAGGC..............................	22	1	21.00	0.00	21.00	0.00	0.00
............................................................................................TGAAACCTTCCAAAACTGAGG...............................	21	1	21.00	0.00	21.00	0.00	0.00
............................................................................................TGAAAACGTCCAAAACTGAGGC..............................	22	1	21.00	3.00	16.00	2.00	0.00
............................................................................................TGAAGCCGTCCAAAACTGAGGCT.............................	23	1	20.00	0.00	19.00	1.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGCC..............................	22	1	20.00	0.00	19.00	1.00	0.00
............................................................................................TGAAACCGTCCGAAACTGAGGC..............................	22	1	20.00	0.00	19.00	1.00	0.00
............................................................................................TGAAACCATCCAAAACTGAGG...............................	21	1	19.00	0.00	19.00	0.00	0.00
.............................................................................................TGAACCGTCCAAAACTGAGGC..............................	21	1	19.00	0.00	19.00	0.00	0.00
............................................................................................TGAAACCGTCCAAAACTGGGG...............................	21	1	19.00	0.00	18.00	1.00	0.00
.............................................................................................TAAACCGTCCAAAACTGAGGC..............................	21	1	19.00	0.00	19.00	0.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGAC.............................	23	1	19.00	0.00	18.00	1.00	0.00
............................................................................................GGAAACCGTCCAAAACTGAGGC..............................	22	1	18.00	0.00	16.00	1.00	1.00
............................................................................................TAAAACCGTCCAAAACTGAGG...............................	21	1	18.00	0.00	18.00	0.00	0.00
............................................................................................TGAAACCGTGCAAAACTGAGGC..............................	22	1	17.00	0.00	17.00	0.00	0.00
............................................................................................CGAAACCGTCCAAAACTGAGG...............................	21	1	15.00	0.00	15.00	0.00	0.00
............................................................................................TGAAACCGTCCAAGACTGAG................................	20	1	15.00	0.00	15.00	0.00	0.00
............................................................................................TGAAACCGTCCxxAACTGAGGC..............................	20	1	15.00	0.00	14.00	1.00	0.00
............................................................................................TGGAACCGTCCAAAACTGAGG...............................	21	1	15.00	0.00	14.00	1.00	0.00
............................................................................................TGAAACCGTCCAAAACTGCGGC..............................	22	1	14.00	0.00	14.00	0.00	0.00
............................................................................................TGAAACCGTCCAAACCTGAGGC..............................	22	1	14.00	0.00	14.00	0.00	0.00
............................................................................................TGAAACCGTCCAACACTGAGGC..............................	22	1	14.00	1.00	13.00	0.00	0.00
............................................................................................TGAAACCGTCCxAAACTGAGG...............................	20	1	14.00	0.00	13.00	1.00	0.00
............................................................................................TGAAGCCGTCCAAAACTGA.................................	19	1	14.00	0.00	14.00	0.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCAA............................	24	1	13.00	0.00	13.00	0.00	0.00
............................................................................................TGAAACCCTCCAAAACTGAGGC..............................	22	1	13.00	0.00	13.00	0.00	0.00
............................................................................................TGAAGCCGTCCAAAACTGAGAC..............................	22	1	13.00	0.00	13.00	0.00	0.00
............................................................................................TGAAACCGTACAAAACTGAGGC..............................	22	1	13.00	0.00	12.00	1.00	0.00
............................................................................................TGAAACTGTCCAAAACTGAGG...............................	21	1	13.00	0.00	13.00	0.00	0.00

droSec1

TTGTATCC--GTAGTGT------------TGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT--CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAA	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
............................................................................................TGAAACCGTCCAAAACTGAGG...............................	21	1	32694.00	3310.00	94.00	29290.00
............................................................................................TGAAACCGTCCAAAACTGAGGC..............................	22	1	27699.00	2496.00	799.00	24404.00
............................................................................................TGAAACCGTCCAAAACTGAG................................	20	1	1455.00	201.00	2.00	1252.00
............................................................................................TGAAACCGTCCAAAACTGAGGA..............................	22	1	382.00	22.00	2.00	358.00
............................................................................................TGAAACCGTCCAAAACTGAGGCA.............................	23	1	330.00	41.00	0.00	289.00
............................................................................................TGAAACCGTCCAAAACTGAGGCT.............................	23	1	263.00	23.00	0.00	240.00
............................................................................................TGAAACCGTCCAAAACTGA.................................	19	1	154.00	2.00	0.00	152.00
............................................................................................TGAAACCGTCCAAAACTGAGGT..............................	22	1	104.00	16.00	0.00	88.00
............................................................................................TGAAACCGTCCAAAACTGAGA...............................	21	1	84.00	4.00	0.00	80.00
...........................................................................................CTGAAACCGTCCAAAACTGAGG...............................	22	1	75.00	7.00	0.00	68.00
............................................................................................TGAAACCGTCCAAAACTGCGG...............................	21	1	70.00	25.00	0.00	45.00
...........................................................................................CTGAAACCGTCCAAAACTGAGGC..............................	23	1	64.00	3.00	1.00	60.00
............................................................................................TGAAACCGTCCAAAACTTAGG...............................	21	1	61.00	8.00	0.00	53.00
............................................................................................TGAAACAGTCCAAAACTGAGG...............................	21	1	60.00	1.00	0.00	59.00
............................................................................................TGAAACCTTCCAAAACTGAGG...............................	21	1	59.00	6.00	0.00	53.00
............................................................................................TGAAGCCGTCCAAAACTGAGG...............................	21	1	57.00	7.00	0.00	50.00
...........................................CTTAGTTTTCGACGTGTTTTGGT..............................................................................	23	1	56.00	11.00	18.00	27.00
............................................................................................TGAAACCATCCAAAACTGAGG...............................	21	1	53.00	1.00	0.00	52.00
............................................................................................TGAAACCGTCCAAAACTAAGG...............................	21	1	52.00	4.00	0.00	48.00
............................................................................................TGAAACCGTCCAAAACTGCGGC..............................	22	1	50.00	21.00	1.00	28.00
............................................................................................TAAAACCGTCCAAAACTGAGG...............................	21	1	50.00	5.00	0.00	45.00
............................................................................................TAAAACCGTCCAAAACTGAGGC..............................	22	1	49.00	3.00	1.00	45.00
............................................................................................TGAAACCGTCCAAACCTGAGGC..............................	22	1	47.00	1.00	3.00	43.00
............................................................................................TGAAACCGTCCAAAACTCAGG...............................	21	1	47.00	9.00	0.00	38.00
............................................................................................TGAAACCGTCCAAAACTGAGGCTT............................	24	1	47.00	4.00	0.00	43.00
............................................................................................TGAAACCATCCAAAACTGAGGC..............................	22	1	45.00	1.00	0.00	44.00
............................................................................................TGAAACCGTCCAAAACTGAGCC..............................	22	1	44.00	7.00	2.00	35.00
............................................................................................TGAAACCGTCCxAAACTGAGG...............................	20	1	44.00	6.00	1.00	37.00
............................................................................................TGAAACCGTCCAAAACTGAAG...............................	21	1	44.00	0.00	0.00	44.00
............................................................................................TGAAACAGTCCAAAACTGAGGC..............................	22	1	43.00	1.00	0.00	42.00
............................................................................................TGAAACCGTCCAAAGCTGAGGC..............................	22	1	43.00	4.00	1.00	38.00
............................................................................................TGAAACCGTACAAAACTGAGG...............................	21	1	42.00	1.00	0.00	41.00
............................................................................................TGAAACCGTCCAAAGCTGAGG...............................	21	1	42.00	6.00	1.00	35.00
............................................................................................TGAAACCGTCCAAAACTGAGGCC.............................	23	1	41.00	1.00	1.00	39.00
............................................................................................TGAAACCGTCCAAACCTGAGG...............................	21	1	41.00	0.00	0.00	41.00
............................................................................................TGAAACCGTCCAAAACTGGGG...............................	21	1	40.00	13.00	0.00	27.00
............................................................................................TGAAACCGCCCAAAACTGAGG...............................	21	1	39.00	7.00	1.00	31.00
............................................................................................TGAAACCGTCCAAAACTAAGGC..............................	22	1	37.00	3.00	0.00	34.00
............................................................................................TGAAACCGTCCAAAACTGATG...............................	21	1	37.00	1.00	0.00	36.00
............................................................................................TGAAAACGTCCAAAACTGAGG...............................	21	1	37.00	0.00	0.00	37.00
............................................................................................CGAAACCGTCCAAAACTGAGG...............................	21	1	36.00	2.00	0.00	34.00
............................................................................................TGAAACCGTCCAAAACTTAGGC..............................	22	1	36.00	4.00	0.00	32.00
............................................................................................TGAAGCCGTCCAAAACTGAGGC..............................	22	1	35.00	4.00	1.00	30.00
.............................................................................................GAAACCGTCCAAAACTGAGG...............................	20	1	35.00	5.00	0.00	30.00
............................................................................................TGAAACCGCCCAAAACTGAGGC..............................	22	1	34.00	3.00	3.00	28.00
............................................................................................TGAAAACGTCCAAAACTGAGGC..............................	22	1	34.00	0.00	0.00	34.00
............................................................................................TGAAACCGTCCAAAACTGAGC...............................	21	1	32.00	6.00	0.00	26.00
............................................................................................TGAAACCGTCCAAAACTGGGGC..............................	22	1	32.00	16.00	0.00	16.00
............................................................................................TGAAACCGTCCxAAACTGAGGC..............................	21	1	31.00	1.00	2.00	28.00
............................................................................................TTAAACCGTCCAAAACTGAGG...............................	21	1	30.00	3.00	0.00	27.00
............................................................................................CGAAACCGTCCAAAACTGAGGC..............................	22	1	30.00	1.00	3.00	26.00
............................................................................................TGAGACCGTCCAAAACTGAGG...............................	21	1	30.00	7.00	0.00	23.00
............................................................................................TGAAACCTTCCAAAACTGAGGC..............................	22	1	29.00	1.00	0.00	28.00
............................................................................................TGAAACCGTCCAACACTGAGGC..............................	22	1	27.00	4.00	0.00	23.00
............................................................................................TGAAACTGTCCAAAACTGAGGC..............................	22	1	27.00	2.00	5.00	20.00
............................................................................................TGAAACCGTCCAAAACTGAGT...............................	21	1	27.00	3.00	0.00	24.00
............................................................................................TGAAACCGTCCAAGACTGAGG...............................	21	1	26.00	2.00	0.00	24.00
............................................................................................TGAAACCGTCCAAAACTGAGTC..............................	22	1	26.00	2.00	0.00	24.00
............................................................................................TGAAACCGTCCAAAACTGACG...............................	21	1	25.00	2.00	0.00	23.00
............................................................................................TGAAACCGTACAAAACTGAGGC..............................	22	1	25.00	0.00	0.00	25.00
............................................................................................TGAAACTGTCCAAAACTGAGG...............................	21	1	25.00	1.00	0.00	24.00
............................................................................................TGAAACCGTCCAAAACTGAGAC..............................	22	1	25.00	3.00	2.00	20.00
............................................................................................TGAAACCGTCCAAAACTGATGC..............................	22	1	24.00	1.00	0.00	23.00
............................................................................................TGAAACCGTCCAAGACTGAGGC..............................	22	1	24.00	2.00	0.00	22.00
............................................................................................TGAAACCGTCCAAAACCGAGG...............................	21	1	24.00	4.00	0.00	20.00
............................................................................................TGGAACCGTCCAAAACTGAGG...............................	21	1	24.00	3.00	0.00	21.00
............................................................................................TGGAACCGTCCAAAACTGAGGC..............................	22	1	24.00	2.00	0.00	22.00
............................................................................................TGAAACCGTCCAACACTGAGG...............................	21	1	23.00	1.00	0.00	22.00
............................................................................................TGAAACCGTCCxxAACTGAGG...............................	19	1	23.00	1.00	0.00	22.00
............................................................................................TGAAACCGTCAAAAACTGAGG...............................	21	1	23.00	0.00	0.00	23.00
............................................................................................TGAAACCGTCCAAAACCGAGGC..............................	22	1	23.00	2.00	1.00	20.00
............................................................................................TGAAACCGTCCAAAACTGAAGC..............................	22	1	23.00	1.00	0.00	22.00
............................................................................................TTAAACCGTCCAAAACTGAGGC..............................	22	1	22.00	3.00	0.00	19.00
...........................................CTTAGTTTTCGACGTGTTTTGG...............................................................................	22	1	22.00	6.00	2.00	14.00
............................................................................................TGAGACCGTCCAAAACTGAGGC..............................	22	1	21.00	3.00	1.00	17.00
............................................................................................TGAAACCGACCAAAACTGAGGC..............................	22	1	20.00	1.00	0.00	19.00
..............................................................................................AAACCGTCCAAAACTGAGG...............................	19	1	20.00	1.00	0.00	19.00
............................................................................................TCAAACCGTCCAAAACTGAGG...............................	21	1	20.00	2.00	0.00	18.00
............................................................................................TGAAACCGACCAAAACTGAGG...............................	21	1	20.00	0.00	0.00	20.00
............................................................................................TGAAACCGTCCAAAACTCAGGC..............................	22	1	20.00	5.00	0.00	15.00
............................................................................................TGAAACCCTCCAAAACTGAGG...............................	21	1	20.00	2.00	0.00	18.00
............................................................................................AGAAACCGTCCAAAACTGAGGC..............................	22	1	20.00	0.00	0.00	20.00
............................................................................................TGAAACCGTTCAAAACTGAGG...............................	21	1	19.00	3.00	0.00	16.00
............................................................................................TGAAACCGTCCAAAACTGTGGC..............................	22	1	19.00	17.00	0.00	2.00
............................................................................................TGAAACCGTCCGAAACTGAGGC..............................	22	1	18.00	3.00	0.00	15.00
............................................................................................TGAAACCCTCCAAAACTGAGGC..............................	22	1	18.00	0.00	1.00	17.00
............................................................................................TGAAACCGTTCAAAACTGAGGC..............................	22	1	17.00	0.00	4.00	13.00
............................................................................................TGAAACCGTCCCAAACTGAGG...............................	21	1	17.00	2.00	0.00	15.00
............................................................................................AGAAACCGTCCAAAACTGAGG...............................	21	1	17.00	0.00	0.00	17.00
............................................................................................TGAAACCGTCCGAAACTGAGG...............................	21	1	17.00	3.00	0.00	14.00
............................................................................................TGAAACCGTCCAAAACTGACGC..............................	22	1	16.00	0.00	0.00	16.00
............................................................................................TGAAACCGTCCCAAACTGAGGC..............................	22	1	16.00	1.00	0.00	15.00
............................................................................................TGAAACCGTCAAAAACTGAGGC..............................	22	1	16.00	1.00	0.00	15.00
............................................................................................TGAAACCGTCCAAAACTAGG................................	20	1	15.00	3.00	0.00	12.00
..............................................................................................AAACCGTCCAAAACTGAGGC..............................	20	1	15.00	0.00	0.00	15.00
............................................................................................TGAAACCGTCCxxAACTGAGGC..............................	20	1	15.00	0.00	2.00	13.00
............................................................................................TGAAACCGTCCAAAACTGTGG...............................	21	1	15.00	11.00	0.00	4.00
............................................................................................TGAAACCGTCCAAAATTGAGG...............................	21	1	14.00	2.00	0.00	12.00
............................................................................................TGAAACCGTCCAAAACTG..................................	18	1	14.00	0.00	0.00	14.00
............................................................................................TGAAATCGTCCAAAACTGAGGC..............................	22	1	14.00	1.00	3.00	10.00
............................................................................................TGAAACCGTCCAAAAATGAGG...............................	21	1	14.00	2.00	0.00	12.00

droYak2

TCATATCC--GTAGTGT------------TGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT--ATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCAACTATCCAAA	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
............................................................................................TGAAACCGTCCAAAACTGAGGC..............................	22	1	96540.00	41.00	3337.00	906.00	10461.00	81795.00
............................................................................................TGAAACCGTCCAAAACTGAGG...............................	21	1	21926.00	2.00	2611.00	1134.00	8336.00	9843.00
............................................................................................TGAAACCGTCCAAAACTGAGGCT.............................	23	1	4753.00	0.00	58.00	12.00	217.00	4466.00
............................................................................................TGAAACCGTCCAAAACTGAGAC..............................	22	1	2169.00	0.00	3.00	2.00	13.00	2151.00
............................................................................................TGAAACCGTCCAAAACTGAG................................	20	1	1819.00	0.00	124.00	60.00	451.00	1184.00
............................................................................................TGAAACCGTCCAAAACTGA.................................	19	1	1177.00	0.00	16.00	0.00	37.00	1124.00
............................................................................................TGAAACCGTCCAAAACTGAGGCC.............................	23	1	980.00	0.00	11.00	1.00	21.00	947.00
............................................................................................TGAAACCGTCCAAAACTGAGGCA.............................	23	1	586.00	0.00	78.00	15.00	260.00	233.00
............................................................................................TGAAACCGTCCAAAACTGAGGCTT............................	24	1	534.00	0.00	6.00	0.00	20.00	508.00
............................................................................................TGAAACCGTCCAAAACTG..................................	18	1	383.00	0.00	0.00	0.00	0.00	383.00
............................................................................................TGAAACCGTCCAAAACTGCGGC..............................	22	1	313.00	0.00	8.00	0.00	117.00	188.00
............................................................................................TGAAACCGTCCAAACCTGAGGC..............................	22	1	237.00	0.00	12.00	2.00	220.00	3.00
............................................................................................TGAAACCGTCCCAAACTGAGGC..............................	22	1	229.00	0.00	39.00	0.00	94.00	96.00
............................................................................................TGAAACCGTCCAACACTGAGGC..............................	22	1	210.00	1.00	25.00	1.00	181.00	2.00
............................................................................................TGAAACCGTCCAAACCTGAGG...............................	21	1	204.00	0.00	9.00	3.00	192.00	0.00
.............................................................................................GAAACCGTCCAAAACTGAGGC..............................	21	1	197.00	0.00	5.00	0.00	3.00	189.00
............................................................................................TGAAACCGTCCACAACTGAGGC..............................	22	1	195.00	0.00	22.00	2.00	169.00	2.00
............................................................................................TGAAACCGTCCAAAACTGCGG...............................	21	1	194.00	0.00	8.00	2.00	163.00	21.00
............................................................................................TGAAACCGTCCAAAACTGG.................................	19	1	188.00	0.00	0.00	0.00	0.00	188.00
............................................................................................TGAAGCCGTCCAAAACTGAGGC..............................	22	1	180.00	0.00	8.00	0.00	23.00	149.00
............................................................................................TGAAACCGTCCAACACTGAGG...............................	21	1	177.00	0.00	12.00	0.00	165.00	0.00
............................................................................................TGAAACCGCCCAAAACTGAGGC..............................	22	1	166.00	0.00	2.00	0.00	33.00	131.00
............................................................................................TGAAACCGTCCAAAGCTGAGGC..............................	22	1	145.00	0.00	9.00	0.00	33.00	103.00
............................................................................................TGAAACCGTCCCAAACTGAGG...............................	21	1	143.00	0.00	38.00	0.00	90.00	15.00
............................................................................................TGAAACCGTCCACAACTGAGG...............................	21	1	139.00	0.00	15.00	3.00	121.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCG.............................	23	1	133.00	0.00	5.00	0.00	8.00	120.00
............................................................................................TGAAACCGTCCAAAACTGAGGT..............................	22	1	133.00	0.00	17.00	5.00	54.00	57.00
............................................................................................TGAAACCGTCCAAAACTGAGGG..............................	22	1	124.00	0.00	3.00	0.00	2.00	119.00
............................................................................................TGAAACCGTCCAAAACTGGGGC..............................	22	1	120.00	0.00	2.00	0.00	18.00	100.00
............................................................................................TGAAACCGTCCAAAACTGAGGA..............................	22	1	115.00	0.00	15.00	1.00	54.00	45.00
............................................................................................TGAAACCGTCCAAGACTGAGGC..............................	22	1	110.00	1.00	6.00	0.00	23.00	80.00
............................................................................................TGAAACCGGCCAAAACTGAGGC..............................	22	1	102.00	0.00	9.00	0.00	74.00	19.00
............................................................................................TGAAACCGTCCATAACTGAGG...............................	21	1	100.00	0.00	14.00	0.00	85.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGTC..............................	22	1	90.00	0.00	12.00	2.00	68.00	8.00
............................................................................................TGAAACCGTCCATAACTGAGGC..............................	22	1	87.00	0.00	12.00	0.00	73.00	2.00
..............................................................................................AAACCGTCCAAAACTGAGGC..............................	20	1	82.00	0.00	1.00	0.00	1.00	80.00
............................................................................................TTAAACCGTCCAAAACTGAGGC..............................	22	1	77.00	0.00	0.00	0.00	6.00	71.00
............................................................................................TCAAACCGTCCAAAACTGAGGC..............................	22	1	77.00	0.00	0.00	1.00	6.00	70.00
............................................................................................CGAAACCGTCCAAAACTGAGGC..............................	22	1	75.00	0.00	7.00	3.00	21.00	44.00
............................................................................................TGAAACCGTCCAAAACTGAGCC..............................	22	1	63.00	0.00	2.00	6.00	34.00	21.00
............................................................................................TAAAACCGTCCAAAACTGAGGC..............................	22	1	63.00	0.00	2.00	1.00	11.00	49.00
............................................................................................TGAAACCATCCAAAACTGAGGC..............................	22	1	62.00	0.00	3.00	0.00	7.00	52.00
............................................................................................TGAAACCGGCCAAAACTGAGG...............................	21	1	62.00	0.00	6.00	0.00	52.00	4.00
............................................................................................TGAAACCGTCCAAAACTCAGGC..............................	22	1	60.00	0.00	3.00	2.00	31.00	24.00
............................................................................................TGAAACCGTCCAAAACTAAGGC..............................	22	1	59.00	0.00	2.00	2.00	20.00	35.00
............................................................................................TGAAACCGTCCAAAACTGATGC..............................	22	1	54.00	0.00	8.00	0.00	38.00	8.00
............................................................................................TGAAACCGTCCAAAGCTGAGG...............................	21	1	52.00	0.00	5.00	2.00	33.00	12.00
............................................................................................TGGAACCGTCCAAAACTGAGGC..............................	22	1	51.00	0.00	2.00	0.00	18.00	31.00
............................................................................................TGAAACCGTCCAAAACTGAC................................	20	1	51.00	0.00	1.00	0.00	0.00	50.00
............................................................................................TGAAACCGTCCGAAACTGAGGC..............................	22	1	50.00	0.00	3.00	0.00	37.00	10.00
............................................................................................TGAAACAGTCCAAAACTGAGGC..............................	22	1	50.00	0.00	1.00	0.00	13.00	36.00
............................................................................................TGAAACCGTCCAAAACTCAGG...............................	21	1	48.00	0.00	3.00	7.00	38.00	0.00
............................................................................................TGAAACCGTCTAAAACTGAGGC..............................	22	1	47.00	0.00	23.00	0.00	9.00	15.00
............................................................................................TGAAACCGTCCAAAACTGACG...............................	21	1	47.00	0.00	12.00	1.00	24.00	10.00
............................................................................................TGAAACCGTCCAAGACTGAGG...............................	21	1	46.00	0.00	5.00	2.00	10.00	29.00
............................................................................................TGAGACCGTCCAAAACTGAGGC..............................	22	1	46.00	0.00	5.00	0.00	23.00	18.00
...........................................................................................CTGAAACCGTCCAAAACTGAGGC..............................	23	1	45.00	0.00	4.00	3.00	22.00	16.00
............................................................................................TGAAACCGTCCAAAACTGAGT...............................	21	1	44.00	0.00	3.00	0.00	37.00	4.00
............................................................................................TGAAACCGTCCAAAACTGATG...............................	21	1	42.00	0.00	9.00	2.00	25.00	6.00
............................................................................................TGAAACCGCCCAAAACTGAGG...............................	21	1	41.00	0.00	4.00	3.00	19.00	15.00
............................................................................................TGAAACCGTCCAGAACTGAGGC..............................	22	1	41.00	0.00	4.00	2.00	21.00	14.00
............................................................................................TGAAACCGTCCAAAACTTAGGC..............................	22	1	39.00	0.00	0.00	4.00	8.00	27.00
............................................................................................TGAAACCGTCCAAAACTGACGC..............................	22	1	39.00	0.00	5.00	0.00	22.00	12.00
............................................................................................TGGAACCGTCCAAAACTGAGG...............................	21	1	38.00	0.00	5.00	0.00	28.00	5.00
............................................................................................TGAAACCGTCCAAAACCGAGGC..............................	22	1	38.00	0.00	4.00	2.00	16.00	16.00
............................................................................................TGAAACCGTCCAAAAATGAGGC..............................	22	1	37.00	0.00	6.00	1.00	24.00	6.00
............................................................................................TGAAACCGTCCAAAACTGTGG...............................	21	1	37.00	0.00	0.00	0.00	18.00	19.00
............................................................................................TGAAACCGTCCAAAACTGAGC...............................	21	1	36.00	0.00	1.00	0.00	22.00	13.00
............................................................................................TGAAACCGTCCAAAACTGAGA...............................	21	1	34.00	0.00	5.00	1.00	19.00	9.00
............................................................................................TGAAACCGTCCGAAACTGAGG...............................	21	1	34.00	0.00	7.00	0.00	23.00	4.00
............................................................................................TGAAGCCGTCCAAAACTGAGG...............................	21	1	33.00	0.00	3.00	1.00	14.00	15.00
............................................................................................TGAAACTGTCCAAAACTGAGGC..............................	22	1	32.00	0.00	3.00	0.00	10.00	19.00
............................................................................................TGAAACCGTCCAAAACGGAGGC..............................	22	1	30.00	0.00	2.00	0.00	26.00	2.00
............................................................................................TGAAACAGTCCAAAACTGAGG...............................	21	1	30.00	0.00	4.00	0.00	19.00	7.00
............................................................................................TGAAACCGTCCAAAACCGAGG...............................	21	1	30.00	0.00	6.00	2.00	20.00	2.00
............................................................................................TGAAACCGTCAAAAACTGAGGC..............................	22	1	28.00	0.00	0.00	0.00	16.00	12.00
............................................................................................TGAAACCGTCCAAAACTGAGGCCT............................	24	1	28.00	0.00	0.00	0.00	3.00	25.00
............................................................................................CGAAACCGTCCAAAACTGAGG...............................	21	1	27.00	0.00	3.00	1.00	20.00	3.00
............................................................................................TGAAACCGTCCxAAACTGAGGC..............................	21	1	27.00	0.00	2.00	1.00	4.00	20.00
............................................................................................TGAAACCGTCCAAAACTGTGGC..............................	22	1	26.00	0.00	3.00	0.00	14.00	9.00
............................................................................................TGAAACCGTCTAAAACTGAGG...............................	21	1	26.00	0.00	20.00	1.00	4.00	1.00
............................................................................................TGAAACCGTACAAAACTGAGGC..............................	22	1	25.00	0.00	3.00	0.00	13.00	9.00
............................................................................................TGAAACCGTTCAAAACTGAGGC..............................	22	1	25.00	0.00	3.00	1.00	10.00	11.00
............................................................................................TGAAACCGTCCAAAACTGGGG...............................	21	1	25.00	0.00	0.00	0.00	14.00	11.00
............................................................................................TAAAACCGTCCAAAACTGAGG...............................	21	1	23.00	0.00	4.00	2.00	8.00	9.00
............................................................................................TGAAATCGTCCAAAACTGAGGC..............................	22	1	23.00	0.00	1.00	1.00	4.00	17.00
............................................................................................TGAAACCGTCCAGAACTGAGG...............................	21	1	23.00	0.00	1.00	0.00	20.00	2.00
...............................................................................................AACCGTCCAAAACTGAGGC..............................	19	1	22.00	0.00	0.00	0.00	0.00	22.00
............................................................................................TGAAACCATCCAAAACTGAGG...............................	21	1	22.00	0.00	6.00	0.00	12.00	4.00
............................................................................................TGAAACCTTCCAAAACTGAGG...............................	21	1	22.00	0.00	0.00	0.00	8.00	14.00
...........................................CTTAGTTTTCGACGTGTTTTGGT..............................................................................	23	1	21.00	2.00	7.00	1.00	7.00	4.00
...........................................................................................CTGAAACCGTCCAAAACTGAGG...............................	22	1	20.00	0.00	3.00	0.00	12.00	5.00
............................................................................................TGACACCGTCCAAAACTGAGGC..............................	22	1	20.00	0.00	4.00	0.00	15.00	1.00
............................................................................................TGAGACCGTCCAAAACTGAGG...............................	21	1	20.00	0.00	3.00	0.00	13.00	4.00
............................................................................................TGAAACCGTCCACAACTGCGG...............................	21	1	19.00	0.00	1.00	0.00	18.00	0.00
............................................................................................TGAAACCGTCCAATACTGAGGC..............................	22	1	19.00	0.00	2.00	0.00	17.00	0.00
............................................................................................TGAAACCGACCAAAACTGAGG...............................	21	1	19.00	0.00	0.00	1.00	16.00	2.00
............................................................................................TGAAACCGTCCAAAACTAAGG...............................	21	1	19.00	0.00	2.00	2.00	12.00	3.00
.............................................................................................GAAACCGTCCAAAACTGAGG...............................	20	1	19.00	0.00	1.00	1.00	5.00	12.00
............................................................................................TGAAACCGTCCAACACTGCGG...............................	21	1	19.00	0.00	3.00	0.00	16.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAAGC..............................	22	1	19.00	0.00	4.00	0.00	2.00	13.00

droEre2

CCATATCC--GTAGTGT------------TGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT--CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAA	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
............................................................................................TGAAACCGTCCAAAACTGAGGC..............................	22	1	55670.00	97.00	6010.00	89.00	49474.00
............................................................................................TGAAACCGTCCAAAACTGAGG...............................	21	1	52993.00	7.00	5443.00	28.00	47515.00
............................................................................................TGAAACCGTCCAAAACTGAG................................	20	1	1711.00	0.00	188.00	1.00	1522.00
............................................................................................TGAAACCGTCCAAAACTGAGGCA.............................	23	1	896.00	0.00	170.00	1.00	725.00
............................................................................................TGAAACCGTCCAAAACTGAGGA..............................	22	1	632.00	0.00	39.00	0.00	593.00
............................................................................................TGAAACCGTCCAAAACTTAGG...............................	21	1	528.00	0.00	7.00	0.00	521.00
............................................................................................TGAAACCGTCCAAAACTTAGGC..............................	22	1	517.00	0.00	9.00	0.00	508.00
............................................................................................TGAAACCGTCAAAAACTGAGG...............................	21	1	467.00	0.00	4.00	0.00	463.00
............................................................................................TGAAACCGTCCAAAACTGATGC..............................	22	1	463.00	1.00	10.00	1.00	451.00
............................................................................................TGAAACCGTCAAAAACTGAGGC..............................	22	1	461.00	0.00	6.00	0.00	455.00
............................................................................................TGAAACCGTCCAAAACTGATG...............................	21	1	415.00	0.00	11.00	0.00	404.00
............................................................................................TGAAACCGTACAAAACTGAGGC..............................	22	1	378.00	0.00	4.00	0.00	374.00
............................................................................................TTAAACCGTCCAAAACTGAGG...............................	21	1	359.00	0.00	6.00	1.00	352.00
............................................................................................TGAAACAGTCCAAAACTGAGGC..............................	22	1	354.00	0.00	5.00	0.00	349.00
............................................................................................TGAAACCGTACAAAACTGAGG...............................	21	1	350.00	0.00	5.00	0.00	345.00
............................................................................................TTAAACCGTCCAAAACTGAGGC..............................	22	1	348.00	1.00	1.00	0.00	346.00
............................................................................................TGAAACAGTCCAAAACTGAGG...............................	21	1	333.00	0.00	4.00	0.00	329.00
............................................................................................TGAAACCGTCCAAAACTGAGGCT.............................	23	1	328.00	0.00	44.00	0.00	284.00
............................................................................................TGAAACCGTCCAAAACTGAGTC..............................	22	1	297.00	1.00	22.00	0.00	274.00
............................................................................................TGAAACCTTCCAAAACTGAGG...............................	21	1	230.00	0.00	2.00	0.00	228.00
............................................................................................TGAAACCTTCCAAAACTGAGGC..............................	22	1	227.00	0.00	1.00	1.00	225.00
............................................................................................TGAAACCGTCCAAAACTGAGT...............................	21	1	195.00	0.00	12.00	0.00	183.00
...........................................CTTAGTTTTCGACGTGTTTTGGT..............................................................................	23	1	178.00	3.00	10.00	0.00	165.00
............................................................................................TGAAAACGTCCAAAACTGAGG...............................	21	1	147.00	0.00	4.00	0.00	143.00
............................................................................................TGAAACCGTCCAAAACTGA.................................	19	1	131.00	0.00	8.00	0.00	123.00
............................................................................................TGAAAACGTCCAAAACTGAGGC..............................	22	1	130.00	0.00	3.00	0.00	127.00
............................................................................................TGAAACCGTCCAAAGCTGAGGC..............................	22	1	129.00	0.00	16.00	1.00	112.00
............................................................................................TGAAACCGTCCAAACCTGAGG...............................	21	1	128.00	0.00	84.00	1.00	43.00
.............................................................................................GAAACCGTCCAAAACTGAGGC..............................	21	1	122.00	0.00	8.00	0.00	114.00
............................................................................................TGAAACCGTCCAAAACTGAGGCC.............................	23	1	120.00	0.00	13.00	0.00	107.00
............................................................................................TGAAACCGTCCAACACTGAGGC..............................	22	1	117.00	0.00	66.00	1.00	50.00
............................................................................................TGAAACCGTCCAAAAATGAGG...............................	21	1	116.00	0.00	5.00	0.00	111.00
............................................................................................TGAAACCGTCCAAAAATGAGGC..............................	22	1	114.00	1.00	6.00	3.00	104.00
............................................................................................TGAAACCGTCCAAACCTGAGGC..............................	22	1	114.00	0.00	59.00	1.00	54.00
............................................................................................TGAAACCGTCCAAAACTGAGGT..............................	22	1	107.00	0.00	24.00	0.00	83.00
...........................................................................................CTGAAACCGTCCAAAACTGAGGC..............................	23	1	101.00	0.00	6.00	1.00	94.00
............................................................................................TGAAGCCGTCCAAAACTGAGGC..............................	22	1	97.00	0.00	8.00	0.00	89.00
............................................................................................TGAAACCGTCCAAAGCTGAGG...............................	21	1	97.00	0.00	11.00	0.00	86.00
............................................................................................TGAAACCGTCCAAAACTGCGG...............................	21	1	91.00	0.00	48.00	0.00	43.00
............................................................................................TGAAACTGTCCAAAACTGAGGC..............................	22	1	90.00	1.00	4.00	0.00	85.00
.............................................................................................GAAACCGTCCAAAACTGAGG...............................	20	1	89.00	0.00	7.00	0.00	82.00
............................................................................................TGAGACCGTCCAAAACTGAGGC..............................	22	1	88.00	0.00	7.00	0.00	81.00
............................................................................................TGAAGCCGTCCAAAACTGAGG...............................	21	1	87.00	0.00	3.00	0.00	84.00
............................................................................................TGAAACCGTCTAAAACTGAGGC..............................	22	1	87.00	0.00	42.00	0.00	45.00
...........................................................................................CTGAAACCGTCCAAAACTGAGG...............................	22	1	86.00	0.00	5.00	0.00	81.00
............................................................................................TGGAACCGTCCAAAACTGAGG...............................	21	1	85.00	0.00	12.00	0.00	73.00
............................................................................................TAAAACCGTCCAAAACTGAGG...............................	21	1	83.00	0.00	4.00	0.00	79.00
............................................................................................TAAAACCGTCCAAAACTGAGGC..............................	22	1	83.00	0.00	5.00	0.00	78.00
............................................................................................TGAAACCGTCCAACACTGAGG...............................	21	1	82.00	0.00	42.00	0.00	40.00
............................................................................................TGGAACCGTCCAAAACTGAGGC..............................	22	1	82.00	0.00	7.00	0.00	75.00
............................................................................................TGAAACCGTCCAAAACTCAGG...............................	21	1	79.00	0.00	10.00	0.00	69.00
............................................................................................TGAAACCGCCCAAAACTGAGG...............................	21	1	76.00	0.00	4.00	1.00	71.00
............................................................................................TGAAACCGCCCAAAACTGAGGC..............................	22	1	75.00	0.00	8.00	0.00	67.00
............................................................................................TGAAACCGTCTAAAACTGAGG...............................	21	1	74.00	0.00	32.00	0.00	42.00
............................................................................................CGAAACCGTCCAAAACTGAGG...............................	21	1	73.00	0.00	7.00	0.00	66.00
............................................................................................TGAAACCGTCCAAAACTCAGGC..............................	22	1	73.00	2.00	15.00	2.00	54.00
............................................................................................TGAAACCGTCCACAACTGAGG...............................	21	1	73.00	0.00	54.00	1.00	18.00
............................................................................................TGAAACCGTCCAAAACCGAGG...............................	21	1	73.00	0.00	11.00	0.00	62.00
............................................................................................TGAAACCGTCCxAAACTGAGG...............................	20	1	70.00	0.00	6.00	0.00	64.00
............................................................................................TGAAACCATCCAAAACTGAGG...............................	21	1	68.00	0.00	7.00	0.00	61.00
............................................................................................CGAAACCGTCCAAAACTGAGGC..............................	22	1	68.00	0.00	7.00	0.00	61.00
............................................................................................TGAGACCGTCCAAAACTGAGG...............................	21	1	68.00	0.00	6.00	0.00	62.00
............................................................................................TGAAACCGTCCAAAACTGCGGC..............................	22	1	67.00	0.00	32.00	1.00	34.00
............................................................................................TGAAACCGTCCAAAACTGAGCC..............................	22	1	66.00	1.00	12.00	0.00	53.00
............................................................................................TGAAACCGTCCAAGACTGAGGC..............................	22	1	65.00	0.00	14.00	0.00	51.00
............................................................................................TGAAACCGTCCAAAACTGAGA...............................	21	1	65.00	0.00	10.00	0.00	55.00
............................................................................................TGAAACCGTCCAAAACCGAGGC..............................	22	1	64.00	0.00	11.00	0.00	53.00
............................................................................................TGAAACCGTCCACAACTGAGGC..............................	22	1	64.00	0.00	43.00	0.00	21.00
............................................................................................TGAAACTGTCCAAAACTGAGG...............................	21	1	63.00	0.00	7.00	0.00	56.00
............................................................................................TGAAACCGTCCAAAACTAAGG...............................	21	1	62.00	0.00	9.00	0.00	53.00
............................................................................................TGCAACCGTCCAAAACTGAGG...............................	21	1	60.00	0.00	2.00	0.00	58.00
............................................................................................TGAAACCGTCCAAAACTAAGGC..............................	22	1	60.00	2.00	9.00	0.00	49.00
............................................................................................TGAAACCGTTCAAAACTGAGG...............................	21	1	58.00	0.00	3.00	0.00	55.00
............................................................................................TGAAACCGTCCAAAACTGGGG...............................	21	1	56.00	0.00	9.00	0.00	47.00
............................................................................................TGAAACCATCCAAAACTGAGGC..............................	22	1	55.00	0.00	7.00	0.00	48.00
............................................................................................TGAAACCGTCCAAGACTGAGG...............................	21	1	54.00	0.00	7.00	0.00	47.00
............................................................................................TGCAACCGTCCAAAACTGAGGC..............................	22	1	54.00	0.00	2.00	0.00	52.00
............................................................................................TGAAACCGTCCCAAACTGAGGC..............................	22	1	53.00	0.00	32.00	2.00	19.00
............................................................................................TGAAACCGTCCxAAACTGAGGC..............................	21	1	53.00	0.00	1.00	0.00	52.00
............................................................................................TGAAACCGTCCAAAACTGAGC...............................	21	1	50.00	0.00	6.00	0.00	44.00
............................................................................................TGAAACCGTCCCAAACTGAGG...............................	21	1	48.00	0.00	20.00	0.00	28.00
............................................................................................TGAAACCGTCCAAAACTGAGGCG.............................	23	1	47.00	0.00	5.00	0.00	42.00
............................................................................................TGAAACCGTCCGAAACTGAGG...............................	21	1	47.00	0.00	14.00	0.00	33.00
............................................................................................TGAAACCGTCCAAAACTGACG...............................	21	1	43.00	0.00	9.00	1.00	33.00
............................................................................................TGAAACCGTCCGAAACTGAGGC..............................	22	1	42.00	0.00	13.00	0.00	29.00
............................................................................................TGAAACCGTCCAAAACTGACGC..............................	22	1	42.00	0.00	8.00	1.00	33.00
............................................................................................TGAAACCGTCCAAAACTGAGAC..............................	22	1	42.00	0.00	6.00	0.00	36.00
............................................................................................TGAAACCGTCCAAAACTGGGGC..............................	22	1	40.00	0.00	4.00	0.00	36.00
............................................................................................TGAAACCGTCCAGAACTGAGG...............................	21	1	40.00	0.00	9.00	0.00	31.00
............................................................................................TGAAACCGTCCAAAACTGAAG...............................	21	1	39.00	0.00	14.00	0.00	25.00
............................................................................................TGAAACCGTTCAAAACTGAGGC..............................	22	1	38.00	0.00	2.00	0.00	36.00
............................................................................................TGAAACCGTCCxxAACTGAGGC..............................	20	1	34.00	0.00	0.00	0.00	34.00
............................................................................................TCAAACCGTCCAAAACTGAGGC..............................	22	1	34.00	0.00	4.00	0.00	30.00
............................................................................................TGAAACCGTCCATAACTGAGGC..............................	22	1	34.00	0.00	27.00	0.00	7.00
............................................................................................TGAAACCGTCCATAACTGAGG...............................	21	1	33.00	0.00	21.00	0.00	12.00
............................................................................................TGAAACCGTCCAGAACTGAGGC..............................	22	1	33.00	0.00	6.00	0.00	27.00
............................................................................................TGAAACCGTCCAAAACTGAAGC..............................	22	1	33.00	1.00	7.00	0.00	25.00
............................................................................................TGAACCCGTCCAAAACTGAGGC..............................	22	1	31.00	0.00	4.00	0.00	27.00
............................................................................................TGAAACCCTCCAAAACTGAGG...............................	21	1	31.00	0.00	1.00	0.00	30.00
............................................................................................TGAAACCCTCCAAAACTGAGGC..............................	22	1	30.00	0.00	0.00	0.00	30.00
............................................................................................TGTAACCGTCCAAAACTGAGGC..............................	22	1	29.00	0.00	2.00	0.00	27.00

droAna3

TAAGATTC--GTAATATAGTAATATATACTGCCTACAATGGCCCTTAGTTTTCGACGTGTTTTGGTGTGCAGGGG-AGTT--CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTA---AAA	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
............................................................................................TGAAACCGTCCAAAACTGAGG...............................	21	1	33292.00	2853.00	24551.00	5855.00	33.00
............................................................................................TGAAACCGTCCAAAACTGAGGC..............................	22	1	27507.00	1905.00	18878.00	6643.00	81.00
............................................................................................TGAAACCGTCCAAAACTGAG................................	20	1	1294.00	207.00	646.00	441.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGA..............................	22	1	625.00	15.00	570.00	39.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGGCA.............................	23	1	360.00	24.00	187.00	147.00	2.00
............................................................................................TGAAACCGTCCAAAACTGAGTC..............................	22	1	328.00	22.00	280.00	26.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCT.............................	23	1	308.00	36.00	161.00	111.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGT...............................	21	1	297.00	31.00	250.00	16.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGA...............................	21	1	224.00	31.00	184.00	9.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGT..............................	22	1	214.00	33.00	111.00	69.00	1.00
............................................................................................TGAAACCGTCCAAAACTTAGG...............................	21	1	194.00	13.00	174.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACTGA.................................	19	1	157.00	2.00	106.00	49.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGAC..............................	22	1	156.00	16.00	125.00	15.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGCC..............................	22	1	128.00	13.00	79.00	36.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCTT............................	24	1	104.00	5.00	79.00	20.00	0.00
............................................................................................TTAAACCGTCCAAAACTGAGG...............................	21	1	103.00	9.00	89.00	5.00	0.00
............................................................................................TGGAACCGTCCAAAACTGAGG...............................	21	1	102.00	1.00	96.00	5.00	0.00
............................................................................................TGAAACCGTCCAAAACTTAGGC..............................	22	1	102.00	3.00	95.00	3.00	1.00
............................................................................................TGAAACCGTCAAAAACTGAGG...............................	21	1	98.00	9.00	74.00	14.00	1.00
............................................................................................TGAAACCGTCCAAAACTGATG...............................	21	1	98.00	4.00	80.00	14.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGC...............................	21	1	90.00	6.00	56.00	28.00	0.00
...........................................CTTAGTTTTCGACGTGTTTTGGT..............................................................................	23	1	89.00	5.00	78.00	6.00	0.00
............................................................................................TGAAACCGTCCAAAACTGATGC..............................	22	1	85.00	6.00	67.00	12.00	0.00
............................................................................................TGAAACCGTCCAAAGCTGAGG...............................	21	1	80.00	6.00	50.00	24.00	0.00
............................................................................................TGAAACAGTCCAAAACTGAGGC..............................	22	1	80.00	3.00	50.00	27.00	0.00
............................................................................................TGAAACCGTACAAAACTGAGG...............................	21	1	76.00	8.00	55.00	13.00	0.00
............................................................................................TGAAACCGTCAAAAACTGAGGC..............................	22	1	74.00	5.00	58.00	11.00	0.00
............................................................................................TGAAACCGCCCAAAACTGAGGC..............................	22	1	73.00	3.00	30.00	38.00	2.00
............................................................................................TGAAACCGTCCAAAGCTGAGGC..............................	22	1	73.00	6.00	54.00	13.00	0.00
............................................................................................TGAAACCGCCCAAAACTGAGG...............................	21	1	70.00	6.00	42.00	22.00	0.00
............................................................................................TGGAACCGTCCAAAACTGAGGC..............................	22	1	69.00	1.00	56.00	12.00	0.00
............................................................................................TGAAACAGTCCAAAACTGAGG...............................	21	1	67.00	5.00	48.00	14.00	0.00
............................................................................................CGAAACCGTCCAAAACTGAGG...............................	21	1	65.00	5.00	39.00	20.00	1.00
............................................................................................TGAAACCGTCCAAAACTGCGG...............................	21	1	64.00	2.00	8.00	54.00	0.00
............................................................................................TGAAACCGTCCAAAACTCAGG...............................	21	1	63.00	2.00	29.00	32.00	0.00
............................................................................................TTAAACCGTCCAAAACTGAGGC..............................	22	1	62.00	9.00	48.00	5.00	0.00
............................................................................................TGAAACCGTACAAAACTGAGGC..............................	22	1	61.00	3.00	44.00	14.00	0.00
............................................................................................TGAAACCTTCCAAAACTGAGG...............................	21	1	59.00	5.00	51.00	3.00	0.00
............................................................................................TGAAACCGGCCAAAACTGAGGC..............................	22	1	58.00	0.00	5.00	53.00	0.00
............................................................................................TGAAACCGTCCATAACTGAGGC..............................	22	1	50.00	5.00	3.00	42.00	0.00
............................................................................................CGAAACCGTCCAAAACTGAGGC..............................	22	1	49.00	3.00	28.00	18.00	0.00
............................................................................................TGAAACCGTCCATAACTGAGG...............................	21	1	49.00	4.00	2.00	43.00	0.00
............................................................................................TAAAACCGTCCAAAACTGAGG...............................	21	1	49.00	7.00	31.00	11.00	0.00
............................................................................................TGAAACCGTCCAACACTGAGGC..............................	22	1	48.00	4.00	14.00	29.00	1.00
............................................................................................TGAAACCATCCAAAACTGAGG...............................	21	1	48.00	4.00	29.00	15.00	0.00
............................................................................................TGAAACCGTCCAGAACTGAGG...............................	21	1	47.00	9.00	22.00	16.00	0.00
............................................................................................TGAAACCGTCCGAAACTGAGGC..............................	22	1	46.00	13.00	11.00	21.00	1.00
............................................................................................TGAAACCGTCCAACACTGAGG...............................	21	1	46.00	4.00	10.00	32.00	0.00
............................................................................................TGAAACCGTCCACAACTGAGG...............................	21	1	46.00	8.00	8.00	30.00	0.00
............................................................................................TGAAGCCGTCCAAAACTGAGG...............................	21	1	44.00	2.00	32.00	10.00	0.00
............................................................................................TGAAACCGTCCAAAACCGAGG...............................	21	1	43.00	0.00	22.00	21.00	0.00
............................................................................................TGAAACCGTCCGAAACTGAGG...............................	21	1	42.00	13.00	19.00	10.00	0.00
............................................................................................TGAAACCGTCCAAAACTGCGGC..............................	22	1	42.00	0.00	8.00	34.00	0.00
............................................................................................TGAAACCGTCCAAGACTGAGG...............................	21	1	42.00	4.00	24.00	14.00	0.00
............................................................................................TGAAACTGTCCAAAACTGAGG...............................	21	1	42.00	4.00	25.00	13.00	0.00
............................................................................................TGAAACCGTCCxAAACTGAGG...............................	20	1	41.00	4.00	35.00	2.00	0.00
............................................................................................TGAAACCGTCCAAAACCGAGGC..............................	22	1	41.00	1.00	15.00	25.00	0.00
............................................................................................TGAAACCGGCCAAAACTGAGG...............................	21	1	41.00	1.00	1.00	39.00	0.00
.............................................................................................GAAACCGTCCAAAACTGAGG...............................	20	1	40.00	3.00	32.00	5.00	0.00
.............................................................................................GAAACCGTCCAAAACTGAGGC..............................	21	1	39.00	3.00	22.00	14.00	0.00
............................................................................................TGAGACCGTCCAAAACTGAGG...............................	21	1	38.00	0.00	27.00	11.00	0.00
............................................................................................TGAAACCGTCCAAAACTCAGGC..............................	22	1	38.00	3.00	6.00	28.00	1.00
............................................................................................TGAAACCGTCTAAAACTGAGG...............................	21	1	37.00	6.00	23.00	8.00	0.00
............................................................................................TGAAACTGTCCAAAACTGAGGC..............................	22	1	37.00	1.00	18.00	18.00	0.00
............................................................................................TGAAACCGTCCAAACCTGAGG...............................	21	1	36.00	0.00	9.00	27.00	0.00
............................................................................................TGAAACCGTCCAAAACTGACG...............................	21	1	36.00	3.00	12.00	21.00	0.00
............................................................................................TGAAAACGTCCAAAACTGAGG...............................	21	1	36.00	3.00	19.00	14.00	0.00
............................................................................................TGAAAACGTCCAAAACTGAGGC..............................	22	1	35.00	1.00	10.00	24.00	0.00
............................................................................................TGAAACCGTCCACAACTGAGGC..............................	22	1	35.00	2.00	5.00	28.00	0.00
............................................................................................AGAAACCGTCCAAAACTGAGGC..............................	22	1	35.00	1.00	4.00	30.00	0.00
............................................................................................TAAAACCGTCCAAAACTGAGGC..............................	22	1	35.00	5.00	25.00	5.00	0.00
............................................................................................TGAAACCGTCCAAACCTGAGGC..............................	22	1	34.00	0.00	9.00	25.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCG.............................	23	1	34.00	1.00	28.00	5.00	0.00
............................................................................................TGAAGCCGTCCAAAACTGAGGC..............................	22	1	33.00	0.00	21.00	12.00	0.00
...........................................................................................CTGAAACCGTCCAAAACTGAGGC..............................	23	1	32.00	4.00	16.00	12.00	0.00
............................................................................................TGAAACCGTCCAAAACTGACGC..............................	22	1	31.00	0.00	7.00	23.00	1.00
............................................................................................TGAAACCGTCCAAAAATGAGG...............................	21	1	31.00	8.00	13.00	10.00	0.00
............................................................................................TGAAACCGTCCAAAAATGAGGC..............................	22	1	31.00	7.00	7.00	16.00	1.00
............................................................................................TGAAACCGTCCAAAACGGAGG...............................	21	1	31.00	0.00	0.00	31.00	0.00
............................................................................................TGAAACCGTTCAAAACTGAGG...............................	21	1	31.00	0.00	25.00	6.00	0.00
............................................................................................TGAGACCGTCCAAAACTGAGGC..............................	22	1	31.00	0.00	18.00	13.00	0.00
............................................................................................TGAAACCGTCCAAAACTGGGG...............................	21	1	31.00	1.00	24.00	6.00	0.00
............................................................................................TGAAATCGTCCAAAACTGAGG...............................	21	1	30.00	0.00	22.00	8.00	0.00
............................................................................................TGAAACCGTCCCAAACTGAGGC..............................	22	1	29.00	5.00	11.00	13.00	0.00
............................................................................................TGAAACCGTCCTAAACTGAGG...............................	21	1	29.00	13.00	6.00	10.00	0.00
............................................................................................TGAAACCTTCCAAAACTGAGGC..............................	22	1	28.00	2.00	22.00	2.00	2.00
...........................................................................................CTGAAACCGTCCAAAACTGAGG...............................	22	1	27.00	3.00	15.00	8.00	1.00
............................................................................................TGAAACCGTCCAAGACTGAGGC..............................	22	1	27.00	4.00	10.00	13.00	0.00
............................................................................................TGAAACCATCCAAAACTGAGGC..............................	22	1	27.00	1.00	17.00	8.00	1.00
............................................................................................TGAAACCGTCTAAAACTGAGGC..............................	22	1	27.00	4.00	16.00	7.00	0.00
............................................................................................TGAAACCGTCCxAAACTGAGGC..............................	21	1	26.00	3.00	22.00	1.00	0.00
............................................................................................TGAAACCGTCCTAAACTGAGGC..............................	22	1	26.00	7.00	3.00	16.00	0.00
............................................................................................TGAAACCGTCCAGAACTGAGGC..............................	22	1	26.00	3.00	10.00	12.00	1.00
............................................................................................TGAAACCGTCCCAAACTGAGG...............................	21	1	25.00	5.00	6.00	14.00	0.00
............................................................................................TGAAATCGTCCAAAACTGAGGC..............................	22	1	25.00	2.00	15.00	8.00	0.00
............................................................................................TGAAACCGTCCAAAACTAAGGC..............................	22	1	24.00	3.00	16.00	4.00	1.00
............................................................................................TGAAACCGTCCAAAACTAAGG...............................	21	1	24.00	4.00	9.00	10.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAT................................	20	1	24.00	2.00	22.00	0.00	0.00
............................................................................................GGAAACCGTCCAAAACTGAGG...............................	21	1	23.00	2.00	3.00	18.00	0.00
............................................................................................TGAAACCGACCAAAACTGAGG...............................	21	1	23.00	0.00	4.00	19.00	0.00
............................................................................................TGAAACCGTCCAAAACTGGGGC..............................	22	1	23.00	1.00	15.00	7.00	0.00

dp4

ACCCACCA--GTAA-----------ATACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT-GATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTAACCttt	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
............................................................................................TGAAACCGTCCAAAACTGAGGC..............................	22	1	8809.00	883.00	96.00	7655.00	175.00
............................................................................................TGAAACCGTCCAAAACTGAGG...............................	21	1	8585.00	1268.00	11.00	7277.00	29.00
............................................................................................TGAAACCGTCCAAAACTGAG................................	20	1	565.00	74.00	0.00	488.00	3.00
............................................................................................TGAAACCGTCCAAAACTGAGGCA.............................	23	1	135.00	7.00	3.00	123.00	2.00
............................................................................................TGAAACCGTCCAAAACTGAGGCT.............................	23	1	72.00	7.00	0.00	55.00	10.00
............................................................................................TGAAACCGTCCAAAACTGAGGT..............................	22	1	59.00	7.00	0.00	51.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGGCTT............................	24	1	34.00	1.00	0.00	24.00	9.00
............................................................................................TGAAACCGTCCAAACCTGAGG...............................	21	1	34.00	3.00	0.00	31.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGA..............................	22	1	33.00	2.00	0.00	31.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCC.............................	23	1	31.00	1.00	0.00	29.00	1.00
............................................................................................TGAAACCGTCCAAAACTGA.................................	19	1	30.00	1.00	0.00	25.00	4.00
............................................................................................TGAAACCGTCCAACACTGAGGC..............................	22	1	30.00	0.00	0.00	30.00	0.00
............................................................................................TGAAACCGTCCAAACCTGAGGC..............................	22	1	29.00	3.00	0.00	26.00	0.00
............................................................................................TGAAACCGTCCAAAGCTGAGG...............................	21	1	29.00	5.00	0.00	24.00	0.00
............................................................................................TGAAACCGTCCAACACTGAGG...............................	21	1	28.00	3.00	0.00	25.00	0.00
............................................................................................TGAAACCGTCCATAACTGAGGC..............................	22	1	28.00	0.00	1.00	27.00	0.00
............................................................................................TGAAACCGTCCAAAGCTGAGGC..............................	22	1	24.00	1.00	0.00	23.00	0.00
............................................................................................TGAAACCGGCCAAAACTGAGGC..............................	22	1	24.00	0.00	0.00	24.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGCC..............................	22	1	23.00	5.00	0.00	18.00	0.00
............................................................................................TGAAACCGTCTAAAACTGAGGC..............................	22	1	22.00	0.00	0.00	22.00	0.00
............................................................................................TGAAACAGTCCAAAACTGAGGC..............................	22	1	22.00	0.00	1.00	21.00	0.00
............................................................................................TGAAACCGTCCAAAACCGAGGC..............................	22	1	22.00	0.00	0.00	22.00	0.00
............................................................................................TGCAACCGTCCAAAACTGAGGC..............................	22	1	21.00	0.00	0.00	21.00	0.00
............................................................................................TGAAACCGTCCACAACTGAGG...............................	21	1	21.00	0.00	0.00	21.00	0.00
............................................................................................TGAAACCGTCCAAAACTGCGG...............................	21	1	21.00	2.00	0.00	19.00	0.00
............................................................................................TGAAACCGTCCACAACTGAGGC..............................	22	1	20.00	0.00	1.00	18.00	1.00
............................................................................................TGAAACCGCCCAAAACTGAGGC..............................	22	1	20.00	1.00	0.00	19.00	0.00
............................................................................................TGGAACCGTCCAAAACTGAGGC..............................	22	1	20.00	1.00	0.00	19.00	0.00
............................................................................................TGAAACCGTCCATAACTGAGG...............................	21	1	18.00	1.00	0.00	17.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGC...............................	21	1	17.00	3.00	0.00	14.00	0.00
...........................................................................................CTGAAACCGTCCAAAACTGAGGC..............................	23	1	17.00	3.00	1.00	13.00	0.00
...........................................CTTAGTTTTCGACGTGTTTTGGT..............................................................................	23	1	17.00	1.00	6.00	10.00	0.00
............................................................................................TGAAACCGTCCAAAACGGAGGC..............................	22	1	16.00	0.00	1.00	15.00	0.00
............................................................................................TGAAACCGTCCAAAACGGAGG...............................	21	1	15.00	0.00	0.00	15.00	0.00
............................................................................................TGAAACCGTCCAGAACTGAGGC..............................	22	1	15.00	0.00	0.00	14.00	1.00
............................................................................................TGAAACCGTCCAAAACTGACGC..............................	22	1	15.00	0.00	0.00	15.00	0.00
............................................................................................TGAAACCGTCAAAAACTGAGGC..............................	22	1	14.00	1.00	0.00	13.00	0.00
............................................................................................TGAAACCGTCCAGAACTGAGG...............................	21	1	14.00	3.00	0.00	11.00	0.00
............................................................................................CGAAACCGTCCAAAACTGAGGC..............................	22	1	14.00	0.00	0.00	14.00	0.00
............................................................................................TGAAACCGTCCAAAACTAAGG...............................	21	1	14.00	3.00	0.00	11.00	0.00
.............................................................................................GAAACCGTCCAAAACTGAGGC..............................	21	1	14.00	1.00	0.00	11.00	2.00
.............................................................................................GAAACCGTCCAAAACTGAGG...............................	20	1	14.00	1.00	0.00	13.00	0.00
............................................................................................TGAAACCGTCCAAAACTCAGGC..............................	22	1	13.00	0.00	0.00	13.00	0.00
............................................................................................TGAAACCGTCCCAAACTGAGGC..............................	22	1	13.00	0.00	1.00	12.00	0.00
............................................................................................TGAAACTGTCCAAAACTGAGG...............................	21	1	13.00	2.00	0.00	11.00	0.00
............................................................................................TGAAACCGTCCAAAACCGAGG...............................	21	1	12.00	1.00	0.00	11.00	0.00
............................................................................................TGAAGCCGTCCAAAACTGAGG...............................	21	1	12.00	1.00	0.00	11.00	0.00
............................................................................................TGTAACCGTCCAAAACTGAGG...............................	21	1	12.00	0.00	0.00	12.00	0.00
............................................................................................TGCAACCGTCCAAAACTGAGG...............................	21	1	12.00	0.00	0.00	12.00	0.00
............................................................................................TGAAACCGTCCAAAACTGCGGC..............................	22	1	12.00	1.00	0.00	11.00	0.00
............................................................................................TGAAACCGTCCAAAAATGAGG...............................	21	1	12.00	0.00	0.00	12.00	0.00
............................................................................................TGGAACCGTCCAAAACTGAGG...............................	21	1	12.00	0.00	0.00	12.00	0.00
............................................................................................TGAAACCGTCTAAAACTGAGG...............................	21	1	12.00	1.00	0.00	11.00	0.00
............................................................................................TGAAACCGTCCAAAACTGATG...............................	21	1	11.00	1.00	0.00	10.00	0.00
............................................................................................TGAAACCGTCCGAAACTGAGGC..............................	22	1	11.00	0.00	0.00	11.00	0.00
............................................................................................TGAAACCGTCCAAGACTGAGGC..............................	22	1	11.00	1.00	0.00	10.00	0.00
............................................................................................TGAAACCGTACAAAACTGAGGC..............................	22	1	10.00	0.00	0.00	10.00	0.00
............................................................................................TAAAACCGTCCAAAACTGAGGC..............................	22	1	10.00	0.00	0.00	10.00	0.00
............................................................................................CGAAACCGTCCAAAACTGAGG...............................	21	1	10.00	1.00	0.00	9.00	0.00
............................................................................................AGAAACCGTCCAAAACTGAGG...............................	21	1	10.00	1.00	0.00	8.00	1.00
............................................................................................TGAAACCGTCCAAAACTAAGGC..............................	22	1	10.00	0.00	0.00	10.00	0.00
............................................................................................TGAAACCGTCCAAAACTGGGG...............................	21	1	10.00	1.00	0.00	9.00	0.00
............................................................................................TGAAACCGTCCAAAACTCAGG...............................	21	1	10.00	0.00	0.00	10.00	0.00
...........................................................................................CTGAAACCGTCCAAAACTGAGG...............................	22	1	9.00	1.00	0.00	8.00	0.00
............................................................................................TGAAACAGTCCAAAACTGAGG...............................	21	1	9.00	1.00	0.00	8.00	0.00
............................................................................................TGAAACCGACCAAAACTGAGGC..............................	22	1	9.00	0.00	0.00	9.00	0.00
............................................................................................TGAAGCCGTCCAAAACTGAGGC..............................	22	1	9.00	0.00	0.00	9.00	0.00
............................................................................................TGAAACCGCCCAAAACTGAGG...............................	21	1	9.00	0.00	0.00	9.00	0.00
............................................................................................TGAAACCGTCCCAAACTGAGG...............................	21	1	9.00	0.00	0.00	9.00	0.00
............................................................................................GGAAACCGTCCAAAACTGAGG...............................	21	1	9.00	0.00	0.00	9.00	0.00
............................................................................................TGAAAACGTCCAAAACTGAGGC..............................	22	1	9.00	1.00	1.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGAC..............................	22	1	9.00	0.00	0.00	8.00	1.00
............................................................................................TGAAACTGTCCAAAACTGAGGC..............................	22	1	9.00	0.00	0.00	9.00	0.00
............................................................................................TGAAACCGTCCAAAAATGAGGC..............................	22	1	8.00	0.00	0.00	8.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAAGC..............................	22	1	8.00	0.00	0.00	8.00	0.00
............................................................................................TGAAACCGTCCAAAACTGACG...............................	21	1	8.00	0.00	1.00	7.00	0.00
............................................................................................TGAGACCGTCCAAAACTGAGGC..............................	22	1	8.00	0.00	1.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGT...............................	21	1	8.00	1.00	0.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCCT............................	24	1	7.00	0.00	0.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGA...............................	21	1	7.00	0.00	0.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACAGAGGC..............................	22	1	7.00	0.00	0.00	7.00	0.00
............................................................................................TGAAACCGTCAAAAACTGAGG...............................	21	1	7.00	1.00	0.00	6.00	0.00
............................................................................................TAAAACCGTCCAAAACTGAGG...............................	21	1	7.00	2.00	0.00	5.00	0.00
............................................................................................TGAAACCGTCCxAAACTGAGG...............................	20	1	7.00	3.00	0.00	4.00	0.00
............................................................................................TGAAACCGTCCAAGACTGAGG...............................	21	1	7.00	0.00	0.00	7.00	0.00
............................................................................................TGAAACCATCCAAAACTGAGGC..............................	22	1	7.00	0.00	0.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACTGGGGC..............................	22	1	6.00	1.00	0.00	5.00	0.00
............................................................................................TGAAACCGGCCAAAACTGAGG...............................	21	1	6.00	0.00	0.00	6.00	0.00
............................................................................................GGAAACCGTCCAAAACTGAGGC..............................	22	1	6.00	1.00	0.00	5.00	0.00
............................................................................................TGTAACCGTCCAAAACTGAGGC..............................	22	1	6.00	1.00	0.00	5.00	0.00
............................................................................................TGAAACCGTCCAAAACTGATGC..............................	22	1	6.00	0.00	0.00	6.00	0.00
............................................................................................TGAAACCGTTCAAAACTGAGGC..............................	22	1	6.00	0.00	0.00	6.00	0.00
............................................................................................TGAAACCGTCCAAAACTTAGGC..............................	22	1	6.00	1.00	0.00	4.00	1.00
............................................................................................TGAAAACGTCCAAAACTGAGG...............................	21	1	6.00	1.00	0.00	5.00	0.00
............................................................................................TGAAACCATCCAAAACTGAGG...............................	21	1	6.00	0.00	0.00	6.00	0.00
............................................................................................AGAAACCGTCCAAAACTGAGGC..............................	22	1	6.00	0.00	0.00	6.00	0.00
............................................................................................TGAAACCGTCCATAACTGAGTC..............................	22	1	6.00	0.00	0.00	6.00	0.00
..............................................................................................AAACCGTCCAAAACTGAGGC..............................	20	1	6.00	0.00	0.00	6.00	0.00
............................................................................................TTAAACCGTCCAAAACTGAGGC..............................	22	1	5.00	0.00	0.00	5.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGTC..............................	22	1	5.00	1.00	0.00	4.00	0.00
............................................................................................TGAAACCGTCCAACACTGAG................................	20	1	5.00	0.00	0.00	5.00	0.00

droPer1

ACCCACCA--GAAT-----------ATACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AGTT-GATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTAACCttt	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
............................................................................................TGAAACCGTCCAAAACTGAGGC..............................	22	1	20955.00	3070.00	47.00	6611.00	10408.00	819.00
............................................................................................TGAAACCGTCCAAAACTGAGG...............................	21	1	18876.00	3954.00	12.00	5873.00	9008.00	29.00
............................................................................................TGAAACCGTCCAAAACTGAG................................	20	1	965.00	140.00	1.00	309.00	514.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGGCA.............................	23	1	385.00	26.00	0.00	136.00	223.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCT.............................	23	1	251.00	33.00	0.00	57.00	151.00	10.00
............................................................................................TGAAACCGTCCAAAACTGAGGT..............................	22	1	158.00	27.00	0.00	38.00	92.00	1.00
............................................................................................TGAAACCGGCCAAAACTGAGGC..............................	22	1	129.00	1.00	0.00	10.00	118.00	0.00
............................................................................................TGAAACCGTCCATAACTGAGG...............................	21	1	112.00	0.00	0.00	17.00	95.00	0.00
............................................................................................TGAAACCGGCCAAAACTGAGG...............................	21	1	106.00	0.00	0.00	6.00	100.00	0.00
............................................................................................TGAAACCGTCCATAACTGAGGC..............................	22	1	101.00	1.00	0.00	16.00	84.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCC.............................	23	1	97.00	18.00	0.00	26.00	46.00	7.00
............................................................................................TGAAACCGCCCAAAACTGAGGC..............................	22	1	93.00	4.00	0.00	14.00	74.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGGA..............................	22	1	83.00	12.00	0.00	35.00	35.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGCC..............................	22	1	78.00	6.00	0.00	19.00	53.00	0.00
............................................................................................TGAAACCGTCCAAAACTGCGG...............................	21	1	75.00	2.00	0.00	26.00	47.00	0.00
............................................................................................TGAAACCGTCCAACACTGAGGC..............................	22	1	71.00	0.00	0.00	13.00	58.00	0.00
............................................................................................TGAAACCGTCCAAACCTGAGG...............................	21	1	70.00	0.00	0.00	30.00	40.00	0.00
............................................................................................TGAAACCGTCCAAAACTGA.................................	19	1	64.00	1.00	0.00	11.00	38.00	14.00
............................................................................................TGAAACCGTCCACAACTGAGG...............................	21	1	64.00	0.00	0.00	15.00	49.00	0.00
............................................................................................TGAAACCGTCCACAACTGAGGC..............................	22	1	63.00	2.00	0.00	17.00	43.00	1.00
............................................................................................TGAAACCGTCCAACACTGAGG...............................	21	1	61.00	0.00	0.00	11.00	50.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGTC..............................	22	1	61.00	2.00	0.00	14.00	45.00	0.00
............................................................................................TGAAACCGTCCAAAACTGACGC..............................	22	1	57.00	2.00	0.00	14.00	41.00	0.00
............................................................................................TGAAACCGTCCAAAACTCAGG...............................	21	1	57.00	2.00	0.00	14.00	41.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCTT............................	24	1	55.00	7.00	0.00	20.00	26.00	2.00
............................................................................................TGAAACCGTCCAAACCTGAGGC..............................	22	1	53.00	1.00	0.00	18.00	34.00	0.00
............................................................................................TGAAACCGTCCAAAACCGAGGC..............................	22	1	52.00	1.00	0.00	15.00	36.00	0.00
............................................................................................TGAAACCGTCCAAAACTCAGGC..............................	22	1	50.00	1.00	0.00	19.00	30.00	0.00
............................................................................................TGAAACCGTCCAAAACTGACG...............................	21	1	49.00	1.00	0.00	15.00	33.00	0.00
............................................................................................TGAAACCGTCCAAAGCTGAGGC..............................	22	1	47.00	3.00	0.00	17.00	26.00	1.00
............................................................................................TGAAACCGTCCGAAACTGAGGC..............................	22	1	45.00	3.00	0.00	5.00	37.00	0.00
............................................................................................TGAAAGCGTCCAAAACTGAGGC..............................	22	1	42.00	0.00	0.00	21.00	21.00	0.00
............................................................................................AGAAACCGTCCAAAACTGAGGC..............................	22	1	42.00	4.00	2.00	9.00	25.00	2.00
............................................................................................TGAAACAGTCCAAAACTGAGGC..............................	22	1	41.00	0.00	0.00	5.00	36.00	0.00
............................................................................................TGAAACCGACCAAAACTGAGGC..............................	22	1	41.00	0.00	0.00	12.00	29.00	0.00
............................................................................................TGAAACCGTCCAAAACCGAGG...............................	21	1	40.00	0.00	0.00	13.00	27.00	0.00
............................................................................................TGAAACCGTCCAGAACTGAGGC..............................	22	1	40.00	2.00	0.00	8.00	26.00	4.00
............................................................................................TGAAACAGTCCAAAACTGAGG...............................	21	1	40.00	2.00	0.00	4.00	34.00	0.00
............................................................................................TGAAAGCGTCCAAAACTGAGG...............................	21	1	39.00	0.00	0.00	30.00	9.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGT...............................	21	1	39.00	4.00	0.00	10.00	24.00	1.00
............................................................................................TGAAACCGTCCAAAGCTGAGG...............................	21	1	39.00	6.00	0.00	10.00	23.00	0.00
............................................................................................TGAAACCGTCCGAAACTGAGG...............................	21	1	38.00	1.00	0.00	7.00	30.00	0.00
............................................................................................TGAAACCGTCCAAAACTGCGGC..............................	22	1	38.00	0.00	0.00	9.00	29.00	0.00
............................................................................................TGAAACCGACCAAAACTGAGG...............................	21	1	37.00	0.00	0.00	4.00	33.00	0.00
............................................................................................TGAAACCGCCCAAAACTGAGG...............................	21	1	36.00	3.00	0.00	11.00	22.00	0.00
............................................................................................TGAAACCGTCCAAAAATGAGGC..............................	22	1	36.00	0.00	0.00	6.00	30.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGC...............................	21	1	35.00	6.00	0.00	8.00	21.00	0.00
............................................................................................TGAAACCGTCCAAAACAGAGGC..............................	22	1	35.00	1.00	0.00	8.00	26.00	0.00
............................................................................................TGAAACCGTCCAAGACTGAGG...............................	21	1	35.00	2.00	0.00	13.00	20.00	0.00
............................................................................................TGAAACTGTCCAAAACTGAGGC..............................	22	1	34.00	0.00	0.00	14.00	20.00	0.00
............................................................................................TGAAGCCGTCCAAAACTGAGG...............................	21	1	34.00	6.00	0.00	9.00	19.00	0.00
...........................................................................................CTGAAACCGTCCAAAACTGAGGC..............................	23	1	33.00	5.00	0.00	5.00	23.00	0.00
............................................................................................TGAAACCGTCCAAGACTGAGGC..............................	22	1	33.00	5.00	0.00	5.00	23.00	0.00
............................................................................................TGAAACCGTCCAAAACGGAGG...............................	21	1	33.00	0.00	0.00	6.00	27.00	0.00
............................................................................................CGAAACCGTCCAAAACTGAGGC..............................	22	1	33.00	3.00	0.00	3.00	20.00	7.00
............................................................................................TGAAACCGTCCAAAACTAAGG...............................	21	1	33.00	4.00	0.00	8.00	21.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGAC..............................	22	1	33.00	1.00	0.00	10.00	10.00	12.00
............................................................................................AGAAACCGTCCAAAACTGAGG...............................	21	1	32.00	2.00	0.00	3.00	25.00	2.00
............................................................................................TGAAGCCGTCCAAAACTGAGGC..............................	22	1	32.00	1.00	0.00	9.00	20.00	2.00
............................................................................................TGAAACCGTCCAAAACGGAGGC..............................	22	1	32.00	0.00	0.00	5.00	27.00	0.00
............................................................................................TGAAAACGTCCAAAACTGAGGC..............................	22	1	32.00	0.00	0.00	11.00	21.00	0.00
............................................................................................TGAAACTGTCCAAAACTGAGG...............................	21	1	31.00	1.00	0.00	13.00	17.00	0.00
............................................................................................TGAAACCGTCCAAAACTGATGC..............................	22	1	30.00	0.00	0.00	6.00	24.00	0.00
............................................................................................TGAAACCGTCCAAAACAGAGG...............................	21	1	30.00	0.00	0.00	7.00	23.00	0.00
............................................................................................TGGAACCGTCCAAAACTGAGG...............................	21	1	30.00	3.00	0.00	3.00	24.00	0.00
................................CCACGATGGACCTTACTT..............................................................................................	18	1	30.00	0.00	0.00	0.00	0.00	30.00
............................................................................................TGAAACCGTCAAAAACTGAGGC..............................	22	1	29.00	2.00	0.00	6.00	21.00	0.00
............................................................................................TGAAACCGTCCATAACTGAGTC..............................	22	1	29.00	0.00	0.00	4.00	25.00	0.00
............................................................................................TGAAACCGTCTAAAACTGAGG...............................	21	1	29.00	3.00	0.00	17.00	9.00	0.00
............................................................................................TGAAACCGTCCAGAACTGAGG...............................	21	1	28.00	2.00	0.00	3.00	23.00	0.00
............................................................................................TGAAACCGTCCAAAACTGGGGC..............................	22	1	28.00	4.00	0.00	7.00	17.00	0.00
............................................................................................TGAAACCGTCCCAAACTGAGG...............................	21	1	28.00	0.00	0.00	9.00	19.00	0.00
............................................................................................GGAAACCGTCCAAAACTGAGGC..............................	22	1	27.00	0.00	0.00	3.00	24.00	0.00
............................................................................................TGAAACCGTCTAAAACTGAGGC..............................	22	1	27.00	1.00	0.00	15.00	11.00	0.00
............................................................................................TGAAACCGTCCCAAACTGAGGC..............................	22	1	27.00	1.00	0.00	7.00	19.00	0.00
.............................................................................................GAAACCGTCCAAAACTGAGGC..............................	21	1	27.00	4.00	0.00	10.00	9.00	4.00
............................................................................................TGAAACCGTCAAAAACTGAGG...............................	21	1	26.00	1.00	0.00	4.00	21.00	0.00
............................................................................................TGAAACCGTCCAAAACTGGGG...............................	21	1	26.00	1.00	0.00	1.00	24.00	0.00
...........................................CTTAGTTTTCGACGTGTTTTGGT..............................................................................	23	1	25.00	10.00	0.00	9.00	6.00	0.00
............................................................................................TGAAACCATCCAAAACTGAGG...............................	21	1	25.00	5.00	0.00	9.00	11.00	0.00
...........................................................................................CTGAAACCGTCCAAAACTGAGG...............................	22	1	25.00	3.00	0.00	8.00	14.00	0.00
............................................................................................TGGAACCGTCCAAAACTGAGGC..............................	22	1	25.00	1.00	0.00	10.00	14.00	0.00
............................................................................................CGAAACCGTCCAAAACTGAGG...............................	21	1	24.00	3.00	0.00	1.00	20.00	0.00
............................................................................................TGAAACCATCCAAAACTGAGGC..............................	22	1	24.00	1.00	0.00	10.00	13.00	0.00
............................................................................................TGAAACCGTCCAAAACTGATG...............................	21	1	24.00	2.00	0.00	4.00	18.00	0.00
............................................................................................TGAAAACGTCCAAAACTGAGG...............................	21	1	24.00	0.00	0.00	9.00	15.00	0.00
............................................................................................TGAAATCGTCCAAAACTGAGGC..............................	22	1	23.00	0.00	0.00	16.00	7.00	0.00
............................................................................................TGAAATCGTCCAAAACTGAGG...............................	21	1	23.00	1.00	0.00	15.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGA...............................	21	1	22.00	3.00	0.00	7.00	12.00	0.00
............................................................................................TGAAACCGTCCAATACTGAGG...............................	21	1	22.00	0.00	0.00	3.00	19.00	0.00
............................................................................................TGAAACCGTCCAAAAATGAGG...............................	21	1	21.00	2.00	0.00	6.00	13.00	0.00
............................................................................................TGAGACCGTCCAAAACTGAGGC..............................	22	1	21.00	1.00	0.00	3.00	17.00	0.00
............................................................................................GGAAACCGTCCAAAACTGAGG...............................	21	1	21.00	0.00	0.00	2.00	19.00	0.00
............................................................................................TGAAACCGTCCAAAACTTAGG...............................	21	1	20.00	2.00	0.00	8.00	10.00	0.00
............................................................................................TGAAACCGTCCAATACTGAGGC..............................	22	1	20.00	0.00	1.00	3.00	16.00	0.00
............................................................................................TGAAACCGTCCAAAACTGTGG...............................	21	1	19.00	0.00	0.00	0.00	19.00	0.00
.............................................................................................GAAACCGTCCAAAACTGAGG...............................	20	1	19.00	3.00	0.00	10.00	6.00	0.00
............................................................................................TGAGACCGTCCAAAACTGAGG...............................	21	1	18.00	1.00	0.00	3.00	14.00	0.00
............................................................................................TGAAACCGTACAAAACTGAGG...............................	21	1	17.00	2.00	0.00	6.00	9.00	0.00
............................................................................................TGAAACCGTACAAAACTGAGGC..............................	22	1	16.00	0.00	0.00	3.00	13.00	0.00
............................................................................................TGAAACCGTTCAAAACTGAGGC..............................	22	1	16.00	2.00	0.00	2.00	12.00	0.00

droWil1

TCGCATC---ATA----------------TATCCGCAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTTAGGAAGTTTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGTTGTGATAGAAGCAACCATGAAAA	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
............................................................................................TGAAACCGTCCAAAACTGAGGC..............................	22	1	235564.00	1255.00	856.00	24338.00	209115.00
............................................................................................TGAAACCGTCCAAAACTGAGG...............................	21	1	53282.00	1656.00	121.00	27619.00	23886.00
............................................................................................TGAAACCGTCCAAAACTGAGGCT.............................	23	1	8127.00	12.00	1.00	153.00	7961.00
............................................................................................TGAAACCGTCCAAAACTGAGAC..............................	22	1	3446.00	2.00	0.00	69.00	3375.00
............................................................................................TGAAACCGTCCAAAACTGAGGCC.............................	23	1	3313.00	3.00	3.00	50.00	3257.00
............................................................................................TGAAACCGTCCAAAACTGAG................................	20	1	2925.00	72.00	3.00	554.00	2296.00
............................................................................................TGAAACCGTCCAAAACTGA.................................	19	1	2260.00	1.00	1.00	63.00	2195.00
............................................................................................TGAAACCGTCCAAAACTGAGGCTT............................	24	1	958.00	3.00	1.00	11.00	943.00
............................................................................................TGAAGCCGTCCAAAACTGAGGC..............................	22	1	874.00	14.00	4.00	132.00	724.00
............................................................................................TGAAACCGTCCAAAACTG..................................	18	1	828.00	0.00	0.00	0.00	828.00
............................................................................................TGAAACCGTCCAGAACTGAGGC..............................	22	1	590.00	1.00	0.00	23.00	566.00
............................................................................................TGAAACCGTCCAAAACTGAGGCA.............................	23	1	538.00	14.00	1.00	184.00	339.00
.............................................................................................GAAACCGTCCAAAACTGAGGC..............................	21	1	481.00	1.00	1.00	27.00	452.00
............................................................................................TGAAACCGTCCAAAACTGAGGA..............................	22	1	461.00	7.00	1.00	346.00	107.00
............................................................................................TGAAACCGTCCAAGACTGAGGC..............................	22	1	447.00	0.00	1.00	31.00	415.00
............................................................................................TGAAGCCGTCCAAAACTGAGG...............................	21	1	373.00	13.00	0.00	228.00	132.00
............................................................................................TGAAACCGTCCAAAACTGAGGCCT............................	24	1	335.00	1.00	0.00	3.00	331.00
............................................................................................TGAAACCGTCCAAAGCTGAGGC..............................	22	1	276.00	2.00	1.00	43.00	230.00
............................................................................................TGAAACCGTCCAAAACTGG.................................	19	1	275.00	0.00	0.00	1.00	274.00
............................................................................................TGAAACCGTCCAAAACTGAGGT..............................	22	1	267.00	8.00	3.00	71.00	185.00
............................................................................................TGAAACCGCCCAAAACTGAGGC..............................	22	1	250.00	2.00	0.00	37.00	211.00
............................................................................................TTAAACCGTCCAAAACTGAGGC..............................	22	1	242.00	0.00	2.00	28.00	212.00
............................................................................................TGAAACCGTCCAAAACTGGGGC..............................	22	1	240.00	0.00	2.00	16.00	222.00
............................................................................................TGAAACCGTCCAAAACTGAGGG..............................	22	1	233.00	0.00	0.00	6.00	227.00
............................................................................................TAAAACCGTCCAAAACTGAGGC..............................	22	1	194.00	1.00	2.00	52.00	139.00
............................................................................................TGAAACCGTCCAAAACTAAGGC..............................	22	1	193.00	0.00	0.00	85.00	108.00
............................................................................................CGAAACCGTCCAAAACTGAGGC..............................	22	1	184.00	2.00	0.00	88.00	94.00
............................................................................................TGAAACCGTCCACAACTGAGGC..............................	22	1	179.00	1.00	0.00	19.00	159.00
............................................................................................TGAAACCATCCAAAACTGAGGC..............................	22	1	175.00	2.00	0.00	70.00	103.00
............................................................................................TGAAACCGTCCAAAACTTAGGC..............................	22	1	175.00	2.00	1.00	59.00	113.00
............................................................................................TGAAACCGTCCAAAACTGAGGCG.............................	23	1	173.00	0.00	0.00	22.00	151.00
...............................................................GGTGTGCTTAxGAAGTGTT..............................................................	18	1	172.00	2.00	2.00	168.00	0.00
............................................................................................TCAAACCGTCCAAAACTGAGGC..............................	22	1	158.00	0.00	0.00	13.00	145.00
..............................................................................................AAACCGTCCAAAACTGAGGC..............................	20	1	145.00	0.00	0.00	4.00	141.00
............................................................................................TGAAACCGTCCAAGACTGAGG...............................	21	1	142.00	2.00	0.00	43.00	97.00
............................................................................................TGAAACCGTCCAAAACTAAGG...............................	21	1	130.00	4.00	0.00	116.00	10.00
............................................................................................TGAGACCGTCCAAAACTGAGGC..............................	22	1	128.00	5.00	1.00	23.00	99.00
............................................................................................TGAAACCGTCCAAAAATGAGGC..............................	22	1	120.00	0.00	0.00	74.00	46.00
............................................................................................TGAAACCGTCAAAAACTGAGGC..............................	22	1	119.00	0.00	3.00	68.00	48.00
............................................................................................CGAAACCGTCCAAAACTGAGG...............................	21	1	111.00	0.00	0.00	103.00	8.00
............................................................................................TGAAACCGTCCAAAACTGAGA...............................	21	1	110.00	0.00	0.00	85.00	25.00
............................................................................................TGAAACCGTCCAAAGCTGAGG...............................	21	1	107.00	5.00	0.00	63.00	39.00
............................................................................................TGAAACCGGCCAAAACTGAGGC..............................	22	1	105.00	2.00	0.00	8.00	95.00
............................................................................................TGGAACCGTCCAAAACTGAGGC..............................	22	1	105.00	2.00	1.00	28.00	74.00
............................................................................................TGAAACCGTCCAGAACTGAGG...............................	21	1	97.00	2.00	0.00	25.00	70.00
............................................................................................TGAAACCGTACAAAACTGAGGC..............................	22	1	96.00	0.00	0.00	76.00	20.00
............................................................................................TGAAACCGTACAAAACTGAGG...............................	21	1	92.00	0.00	0.00	91.00	1.00
............................................................................................TGAAAACGTCCAAAACTGAGGC..............................	22	1	92.00	2.00	1.00	70.00	19.00
............................................................................................TAAAACCGTCCAAAACTGAGG...............................	21	1	92.00	3.00	1.00	72.00	16.00
............................................................................................TGAAACCGTCTAAAACTGAGGC..............................	22	1	89.00	0.00	0.00	22.00	67.00
............................................................................................TGAAACCGTCAAAAACTGAGG...............................	21	1	89.00	1.00	0.00	82.00	6.00
............................................................................................TGAAACCGTCCAAAACTCAGGC..............................	22	1	87.00	2.00	3.00	22.00	60.00
............................................................................................TGAAACCGCCCAAAACTGAGG...............................	21	1	87.00	5.00	0.00	64.00	18.00
............................................................................................TGAAACCGTCCxAAACTGAGGC..............................	21	1	86.00	2.00	3.00	22.00	59.00
............................................................................................TGAAACTGTCCAAAACTGAGGC..............................	22	1	83.00	0.00	1.00	24.00	58.00
............................................................................................AGAAACCGTCCAAAACTGAGGC..............................	22	1	79.00	0.00	0.00	51.00	28.00
............................................................................................TGAAACCATCCAAAACTGAGG...............................	21	1	79.00	0.00	0.00	68.00	11.00
..............................................................TGGTGTGCTTAxGAAGTGTT..............................................................	19	1	77.00	5.00	3.00	69.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAAGC..............................	22	1	75.00	0.00	0.00	45.00	30.00
...........................................................................................CTGAAACCGTCCAAAACTGAGGC..............................	23	1	75.00	3.00	1.00	39.00	32.00
............................................................................................TGAAACCGTCCAAAAATGAGG...............................	21	1	75.00	1.00	0.00	74.00	0.00
............................................................................................TGAAATCGTCCAAAACTGAGGC..............................	22	1	72.00	1.00	0.00	31.00	40.00
.............................................................................................GAAACCGTCCAAAACTGAGG...............................	20	1	72.00	3.00	0.00	37.00	32.00
...........................................CTTAGTTTTCGACGTGTTTTGGT..............................................................................	23	1	71.00	1.00	10.00	55.00	5.00
............................................................................................TGAAACCGTCCAAAACTGAAG...............................	21	1	71.00	1.00	0.00	67.00	3.00
............................................................................................TGAAAACGTCCAAAACTGAGG...............................	21	1	69.00	0.00	0.00	68.00	1.00
............................................................................................TGAAACCGTCCATAACTGAGGC..............................	22	1	66.00	0.00	0.00	4.00	62.00
............................................................................................GGAAACCGTCCAAAACTGAGGC..............................	22	1	66.00	0.00	1.00	45.00	20.00
............................................................................................TTAAACCGTCCAAAACTGAGG...............................	21	1	66.00	2.00	0.00	34.00	30.00
............................................................................................TGAAACCGTCCAAAACTGAC................................	20	1	64.00	0.00	0.00	0.00	64.00
............................................................................................TGAAACCGTCCAAAACTGATGC..............................	22	1	64.00	0.00	1.00	22.00	41.00
............................................................................................TGAAACCTTCCAAAACTGAGGC..............................	22	1	64.00	1.00	1.00	33.00	29.00
............................................................................................TGAAACCGTCCAAAACTTAGG...............................	21	1	64.00	13.00	0.00	49.00	2.00
............................................................................................TGAAACCTTCCAAAACTGAGG...............................	21	1	62.00	0.00	0.00	36.00	26.00
............................................................................................TGAAACCGTCCAAAACTCAGG...............................	21	1	62.00	7.00	1.00	45.00	9.00
............................................................................................TGAAACCGTCCAAAACCGAGGC..............................	22	1	61.00	0.00	0.00	24.00	37.00
............................................................................................TGAAACCGTCCAAACCTGAGGC..............................	22	1	59.00	3.00	1.00	41.00	14.00
............................................................................................TGAAACCGTCCAAAACTGAGCC..............................	22	1	58.00	2.00	0.00	37.00	19.00
............................................................................................TGAAACCGTCCGAAACTGAGGC..............................	22	1	58.00	1.00	2.00	19.00	36.00
............................................................................................GGAAACCGTCCAAAACTGAGG...............................	21	1	55.00	0.00	0.00	53.00	2.00
............................................................................................TGAAACCGTCCAAAACTGCGG...............................	21	1	53.00	2.00	0.00	49.00	2.00
...........................................................................................CTGAAACCGTCCAAAACTGAGG...............................	22	1	52.00	3.00	0.00	46.00	3.00
............................................................................................TGAAACCGTCCAAAACTGATG...............................	21	1	51.00	1.00	0.00	39.00	11.00
............................................................................................TGAAACCGTCCxAAACTGAGG...............................	20	1	51.00	3.00	0.00	41.00	7.00
............................................................................................TGAAACCGTTCAAAACTGAGGC..............................	22	1	50.00	1.00	0.00	12.00	37.00
............................................................................................AGAAACCGTCCAAAACTGAGG...............................	21	1	49.00	1.00	0.00	43.00	5.00
............................................................................................TGAAACCGTCCAAAACTGGGG...............................	21	1	48.00	0.00	0.00	30.00	18.00
............................................................................................TGAAACCGTCCAAAACTGACGC..............................	22	1	46.00	0.00	0.00	21.00	25.00
...............................................................................................AACCGTCCAAAACTGAGGC..............................	19	1	46.00	0.00	0.00	2.00	44.00
............................................................................................TGAAACCGTCCAAAACTGAGT...............................	21	1	46.00	1.00	0.00	22.00	23.00
............................................................................................TGAAACCGTCCAAAACTGAGC...............................	21	1	45.00	1.00	0.00	26.00	18.00
............................................................................................TGAAACCGACCAAAACTGAGGC..............................	22	1	44.00	1.00	1.00	16.00	26.00
............................................................................................TGGAACCGTCCAAAACTGAGG...............................	21	1	44.00	1.00	0.00	26.00	17.00
..............................................................................................AAACCGTCCAAAACTGAGG...............................	19	1	43.00	0.00	0.00	19.00	24.00
............................................................................................TGAGACCGTCCAAAACTGAGG...............................	21	1	42.00	1.00	0.00	33.00	8.00
............................................................................................TGAAACCGTCCACAACTGAGG...............................	21	1	42.00	2.00	0.00	18.00	22.00
............................................................................................TGAAACCGTCCAAAATTGAGGC..............................	22	1	41.00	0.00	0.00	15.00	26.00
............................................................................................TGAAACCGTCCAAAACCGAGG...............................	21	1	40.00	2.00	0.00	32.00	6.00
.............................................................................................TAAACCGTCCAAAACTGAGGC..............................	21	1	39.00	0.00	0.00	0.00	39.00
............................................................................................TGAAACCGTCCAACACTGAGGC..............................	22	1	38.00	0.00	1.00	26.00	11.00
............................................................................................TCAAACCGTCCAAAACTGAGG...............................	21	1	37.00	0.00	0.00	28.00	9.00

droVir3

tTtTTtTTTCCTAAC-------TAGATAATGCCCACAATGGTTCTTAGTTTTAGACGTGTTTTGGTGTGCTTG-A-AGTT--TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCGATTGT-GAGGTAAAAGCGTCCA------	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
............................................................................................TGAAACCGTCCAAAACTGAGGC..............................	22	1	40796.00	954.00	5445.00	89.00	2994.00	31314.00
............................................................................................TGAAACCGTCCAAAACTGAGG...............................	21	1	16374.00	1758.00	7368.00	28.00	799.00	6421.00
............................................................................................TGAAACCGTCCAAAACTGAG................................	20	1	1995.00	157.00	652.00	1.00	98.00	1087.00
............................................................................................TGAAACCGTCCAAAACTGAGGCT.............................	23	1	1845.00	15.00	83.00	0.00	221.00	1526.00
............................................................................................TGAAACCGTCCAAAACTGA.................................	19	1	1600.00	5.00	94.00	0.00	121.00	1380.00
............................................................................................TGAAACCGTCCAAAACTGAGAC..............................	22	1	924.00	0.00	3.00	0.00	45.00	876.00
............................................................................................TGAAACCGTCCAAAACTGAGGCC.............................	23	1	404.00	5.00	7.00	0.00	96.00	296.00
............................................................................................TGAAACCGTCCAAAACTGAGGCTT............................	24	1	298.00	1.00	9.00	1.00	33.00	254.00
............................................................................................TGAAACCGTCCAAAACTG..................................	18	1	286.00	0.00	0.00	0.00	29.00	257.00
............................................................................................TGAAACCGTCCAAAACTGG.................................	19	1	283.00	0.00	0.00	0.00	23.00	260.00
............................................................................................TGAAACCGTCCAAAACTGAGGCA.............................	23	1	178.00	6.00	95.00	1.00	12.00	64.00
............................................................................................TGAAACCGTCCAAAACTGCGGC..............................	22	1	87.00	0.00	12.00	1.00	3.00	71.00
............................................................................................TGAAACCGTCCAAAACTGAGGT..............................	22	1	87.00	6.00	35.00	0.00	10.00	36.00
............................................................................................TGAAACCGTCCAAAACTGAGGA..............................	22	1	85.00	5.00	43.00	0.00	2.00	35.00
.............................................................................................GAAACCGTCCAAAACTGAGGC..............................	21	1	80.00	3.00	6.00	0.00	2.00	69.00
............................................................................................TGAAACAGTCCAAAACTGAGGC..............................	22	1	79.00	1.00	32.00	0.00	4.00	42.00
............................................................................................TGAAACCGTCCAAAACTGAGGCG.............................	23	1	75.00	0.00	1.00	0.00	11.00	63.00
............................................................................................TGAAACCGCCCAAAACTGAGGC..............................	22	1	73.00	1.00	27.00	0.00	5.00	40.00
............................................................................................TGAAGCCGTCCAAAACTGAGGC..............................	22	1	71.00	1.00	9.00	0.00	2.00	59.00
............................................................................................TGAAACCGTCCAAAACTGAGGG..............................	22	1	71.00	1.00	1.00	0.00	12.00	57.00
............................................................................................TGAAACCGTCCAAAACTGACG...............................	21	1	62.00	3.00	57.00	1.00	0.00	1.00
............................................................................................TGAAACCGCCCAAAACTGAGG...............................	21	1	59.00	1.00	50.00	1.00	0.00	7.00
............................................................................................TGAAACCGTCCAAAACTGAC................................	20	1	56.00	0.00	3.00	0.00	1.00	52.00
............................................................................................TGAAACCGTCCATAACTGAGG...............................	21	1	52.00	0.00	50.00	0.00	0.00	2.00
............................................................................................TGAAACCGTCCAAAACTGGGGC..............................	22	1	50.00	1.00	5.00	0.00	2.00	42.00
............................................................................................TGAAACAGTCCAAAACTGAGG...............................	21	1	48.00	0.00	41.00	0.00	0.00	7.00
............................................................................................TGAAACCGTCCAAAACTGACGC..............................	22	1	47.00	0.00	37.00	1.00	0.00	9.00
............................................................................................TGAAACCGTCCAAAACTGAGCC..............................	22	1	45.00	7.00	32.00	0.00	0.00	6.00
............................................................................................TGAAACCGTCCAAAACTGCGG...............................	21	1	45.00	2.00	19.00	0.00	2.00	22.00
............................................................................................TGAAACCGTCCCAAACTGAGGC..............................	22	1	45.00	1.00	3.00	2.00	1.00	38.00
............................................................................................TGAAACCGTCCAAAACTGAGA...............................	21	1	45.00	4.00	18.00	0.00	2.00	21.00
............................................................................................TGAAACCGTCCAACACTGAGG...............................	21	1	44.00	0.00	44.00	0.00	0.00	0.00
............................................................................................TGAAACCGTCCAAAACTTAGGC..............................	22	1	42.00	0.00	19.00	0.00	4.00	19.00
............................................................................................TGAAACCGTCCAAAGCTGAGGC..............................	22	1	42.00	2.00	9.00	1.00	3.00	27.00
............................................................................................TGAAACCGTCCAACACTGAGGC..............................	22	1	41.00	1.00	38.00	1.00	0.00	1.00
............................................................................................TGAAACCGTCCATAACTGAGGC..............................	22	1	40.00	1.00	38.00	0.00	1.00	0.00
............................................................................................TGAAACCGGCCAAAACTGAGGC..............................	22	1	36.00	0.00	19.00	0.00	1.00	16.00
............................................................................................CGAAACCGTCCAAAACTGAGGC..............................	22	1	36.00	0.00	12.00	0.00	0.00	24.00
............................................................................................TTAAACCGTCCAAAACTGAGGC..............................	22	1	36.00	1.00	3.00	0.00	1.00	31.00
............................................................................................TGAAACCGTCCAAAACTGAGC...............................	21	1	35.00	2.00	26.00	0.00	1.00	6.00
............................................................................................TGAAACCGGCCAAAACTGAGG...............................	21	1	32.00	0.00	31.00	0.00	0.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGGCCT............................	24	1	30.00	0.00	2.00	0.00	11.00	17.00
............................................................................................TGAAACCGTCCACAACTGAGG...............................	21	1	30.00	1.00	28.00	1.00	0.00	0.00
............................................................................................TGAAACCGTCCAAAACTCAGG...............................	21	1	30.00	3.00	23.00	0.00	1.00	3.00
............................................................................................TGAAGCCGTCCAAAACTGAGG...............................	21	1	29.00	2.00	7.00	0.00	2.00	18.00
............................................................................................TAAAACCGTCCAAAACTGAGGC..............................	22	1	28.00	0.00	3.00	0.00	3.00	22.00
............................................................................................TGAAACCGTCCAAACCTGAGG...............................	21	1	25.00	3.00	21.00	1.00	0.00	0.00
............................................................................................TCAAACCGTCCAAAACTGAGGC..............................	22	1	25.00	1.00	3.00	0.00	4.00	17.00
............................................................................................TGAAACCGTCCAAAACTGAGT...............................	21	1	25.00	0.00	11.00	0.00	2.00	12.00
..............................................................................................AAACCGTCCAAAACTGAGGC..............................	20	1	24.00	0.00	2.00	0.00	1.00	21.00
............................................................................................TGAAACCATCCAAAACTGAGGC..............................	22	1	24.00	1.00	4.00	0.00	2.00	17.00
............................................................................................TGAAACCGTCCAAAACTGTGG...............................	21	1	24.00	0.00	7.00	0.00	2.00	15.00
............................................................................................TGAAACCGTCAAAAACTGAGGC..............................	22	1	23.00	0.00	14.00	0.00	2.00	7.00
............................................................................................TGGAACCGTCCAAAACTGAGGC..............................	22	1	23.00	0.00	5.00	0.00	2.00	16.00
............................................................................................TGAAACCGTCCAGAACTGAGGC..............................	22	1	22.00	1.00	11.00	0.00	3.00	7.00
............................................................................................TGAAACCGTCCAAAACTGAGTC..............................	22	1	22.00	0.00	19.00	0.00	0.00	3.00
............................................................................................TGAAACCGTCCAAAACCGAGG...............................	21	1	22.00	3.00	17.00	0.00	1.00	1.00
............................................................................................TGAAACCGTCCAAAGCTGAGG...............................	21	1	22.00	1.00	8.00	0.00	0.00	13.00
............................................................................................TGAAACCGTCCAAAACTAAGGC..............................	22	1	21.00	4.00	3.00	0.00	0.00	14.00
............................................................................................TGAAACCGTCCAAAACCGAGGC..............................	22	1	21.00	0.00	14.00	0.00	1.00	6.00
............................................................................................TGAAACCGTCCAAGACTGAGG...............................	21	1	21.00	2.00	8.00	0.00	1.00	10.00
............................................................................................TGAAACTGTCCAAAACTGAGGC..............................	22	1	21.00	0.00	10.00	0.00	0.00	11.00
............................................................................................CGAAACCGTCCAAAACTGAGG...............................	21	1	20.00	2.00	15.00	0.00	0.00	3.00
............................................................................................TGAAACCGTCCCAAACTGAGG...............................	21	1	20.00	0.00	8.00	0.00	3.00	9.00
............................................................................................TGAAACCGTCCAAAACTAAGG...............................	21	1	20.00	10.00	7.00	0.00	0.00	3.00
............................................................................................TGGAACCGTCCAAAACTGAGG...............................	21	1	19.00	2.00	13.00	0.00	0.00	4.00
............................................................................................TGAAACCGTCCAAAACTTAGG...............................	21	1	18.00	5.00	11.00	0.00	0.00	2.00
............................................................................................TGAAACCGTCCAGAACTGAGG...............................	21	1	18.00	1.00	17.00	0.00	0.00	0.00
............................................................................................TGAGACCGTCCAAAACTGAGGC..............................	22	1	17.00	1.00	4.00	0.00	2.00	10.00
............................................................................................TGAAACCGTCCGAAACTGAGGC..............................	22	1	17.00	0.00	10.00	0.00	1.00	6.00
............................................................................................TGAAACCGTCCAAGACTGAGGC..............................	22	1	17.00	0.00	7.00	0.00	3.00	7.00
............................................................................................TGAAACCGTCCAAAACAGAGG...............................	21	1	17.00	4.00	13.00	0.00	0.00	0.00
............................................................................................TGAAACCGTCCACAACTGAGGC..............................	22	1	17.00	0.00	15.00	0.00	0.00	2.00
.............................................................................................GAAACCGTCCAAAACTGAGG...............................	20	1	17.00	1.00	4.00	0.00	0.00	12.00
............................................................................................TGAAAACGTCCAAAACTGAGG...............................	21	1	16.00	0.00	16.00	0.00	0.00	0.00
............................................................................................TGAAACCGTCCAAAACTGATG...............................	21	1	16.00	0.00	11.00	0.00	0.00	5.00
............................................................................................TGAAACCGTCTAAAACTGAGGC..............................	22	1	16.00	0.00	5.00	0.00	2.00	9.00
............................................................................................TGAAACCGTCCGAAACTGAGG...............................	21	1	16.00	2.00	11.00	0.00	1.00	2.00
.............................................................................................GAAACCGTCCAAAACTGAGGCT.............................	22	1	15.00	0.00	1.00	0.00	3.00	11.00
............................................................................................TGAAACCGTCCAAAACTGGGG...............................	21	1	15.00	1.00	7.00	0.00	2.00	5.00
............................................................................................TGAAACTGTCCAAAACTGAGG...............................	21	1	15.00	0.00	12.00	0.00	0.00	3.00
............................................................................................TGAAACCGTCCAAAACTCAGGC..............................	22	1	15.00	0.00	12.00	2.00	0.00	1.00
............................................................................................TGAAACCGACCAAAACTGAGGC..............................	22	1	15.00	0.00	13.00	0.00	0.00	2.00
............................................................................................TGAAACCGTCCAAATCTGAGG...............................	21	1	15.00	0.00	14.00	0.00	0.00	1.00
............................................................................................TGAAACCGTCCAAAACTGT.................................	19	1	15.00	0.00	2.00	0.00	1.00	12.00
............................................................................................TGAAACCGTCCAAAACGGAGG...............................	21	1	14.00	0.00	14.00	0.00	0.00	0.00
............................................................................................TGAAACCGGCCAAAACGGAGG...............................	21	1	14.00	0.00	14.00	0.00	0.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAA................................	20	1	14.00	0.00	0.00	0.00	1.00	13.00
............................................................................................TGAAACCGTCCAAAACTGAGGCCC............................	24	1	14.00	0.00	0.00	0.00	13.00	1.00
............................................................................................TGAAACCGTCCAATACTGAGG...............................	21	1	13.00	0.00	13.00	0.00	0.00	0.00
............................................................................................GGAAACCGTCCAAAACTGAGGC..............................	22	1	12.00	0.00	5.00	0.00	3.00	4.00
............................................................................................TGAAACCGTCCAAACCTGAGGC..............................	22	1	12.00	1.00	9.00	1.00	0.00	1.00
............................................................................................TGAAACCGTCCTAAACTGAGG...............................	21	1	12.00	0.00	12.00	0.00	0.00	0.00
............................................................................................TGAAACCGCCCAAAACTGACG...............................	21	1	12.00	0.00	12.00	0.00	0.00	0.00
............................................................................................TGAAACCGACCAAAACTGAGG...............................	21	1	12.00	0.00	12.00	0.00	0.00	0.00
...........................................CTTAGTTTTAGACGTGTTTTGG...............................................................................	22	1	11.00	4.00	6.00	1.00	0.00	0.00
............................................................................................TGAAACCGTCCAAAACGGAGGC..............................	22	1	11.00	0.00	9.00	0.00	0.00	2.00
............................................................................................TGAAACCGTCCxAAACTGAGGC..............................	21	1	11.00	1.00	1.00	0.00	0.00	9.00
............................................................................................TGAAACCGTTCAAAACTGAGGC..............................	22	1	11.00	0.00	4.00	0.00	1.00	6.00
............................................................................................TGAAACCGTCAAAAACTGAGG...............................	21	1	10.00	1.00	8.00	0.00	0.00	1.00
............................................................................................TGAAACCGTCCATAACTGAGTC..............................	22	1	10.00	0.00	10.00	0.00	0.00	0.00

droMoj3

-----------------------------TGCCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTTGGG-AGTT--TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GAGGCGAAAGCATCCAG-----	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
............................................................................................TGAAACCGTCCAAAACTGAGGC..............................	22	1	16383.00	2057.00	9660.00	4641.00	25.00
............................................................................................TGAAACCGTCCAAAACTGAGG...............................	21	1	14091.00	2283.00	8015.00	3791.00	2.00
............................................................................................TGAAACCGTCCAAAACTGAG................................	20	1	628.00	122.00	351.00	155.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCT.............................	23	1	384.00	43.00	231.00	110.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGT..............................	22	1	245.00	23.00	165.00	57.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCA.............................	23	1	244.00	19.00	144.00	81.00	0.00
............................................................................................TGAAACCGTCCAACACTGAGGC..............................	22	1	119.00	0.00	44.00	75.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCTT............................	24	1	111.00	12.00	69.00	30.00	0.00
............................................................................................TGAAACCGTCCCAAACTGAGGC..............................	22	1	106.00	0.00	8.00	98.00	0.00
............................................................................................TGAAACCGTCCACAACTGAGGC..............................	22	1	100.00	0.00	25.00	75.00	0.00
............................................................................................TGAAACCGTCCATAACTGAGG...............................	21	1	95.00	0.00	58.00	37.00	0.00
............................................................................................TGAAACCGTCCCAAACTGAGG...............................	21	1	91.00	1.00	10.00	80.00	0.00
............................................................................................TGAAACCGTCCAAAACTGA.................................	19	1	91.00	5.00	56.00	30.00	0.00
............................................................................................TGAAACCGTCCAAACCTGAGGC..............................	22	1	88.00	1.00	49.00	38.00	0.00
............................................................................................TGAAACCGTCCAACACTGAGG...............................	21	1	84.00	0.00	23.00	61.00	0.00
............................................................................................TGAAACCGTCCACAACTGAGG...............................	21	1	84.00	1.00	21.00	62.00	0.00
............................................................................................TGAAACCGTCCATAACTGAGGC..............................	22	1	84.00	0.00	59.00	25.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGA..............................	22	1	75.00	5.00	49.00	21.00	0.00
............................................................................................TGAAACCGTCCAAAACTGCGG...............................	21	1	66.00	0.00	19.00	47.00	0.00
............................................................................................TGAAACCGTCCAAACCTGAGG...............................	21	1	60.00	0.00	31.00	29.00	0.00
............................................................................................TGAAACCGGCCAAAACTGAGGC..............................	22	1	60.00	2.00	46.00	12.00	0.00
............................................................................................TGAAACCGTCCAAAACTGCGGC..............................	22	1	59.00	0.00	22.00	37.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGTC..............................	22	1	54.00	4.00	37.00	13.00	0.00
............................................................................................TGAAACCGTCCAAAGCTGAGGC..............................	22	1	50.00	3.00	40.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACTGACG...............................	21	1	48.00	1.00	20.00	27.00	0.00
............................................................................................TGAAACCGGCCAAAACTGAGG...............................	21	1	37.00	0.00	27.00	10.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGTT.............................	23	1	36.00	1.00	28.00	7.00	0.00
............................................................................................TGAAGCCGTCCAAAACTGAGGC..............................	22	1	36.00	1.00	25.00	10.00	0.00
............................................................................................TGAAACCGTCCAAAACTGACGC..............................	22	1	36.00	0.00	16.00	20.00	0.00
............................................................................................TGAAACCGTCTAAAACTGAGGC..............................	22	1	35.00	1.00	11.00	22.00	1.00
............................................................................................TGAAACCGTCCAAAACTGATGC..............................	22	1	34.00	6.00	16.00	12.00	0.00
............................................................................................CGAAACCGTCCAAAACTGAGGC..............................	22	1	33.00	4.00	17.00	12.00	0.00
...........................................................................................CTGAAACCGTCCAAAACTGAGGC..............................	23	1	31.00	4.00	19.00	8.00	0.00
............................................................................................TGAAACCGTCCAAAACCGAGG...............................	21	1	31.00	1.00	14.00	16.00	0.00
............................................................................................TGAAACCGTCTAAAACTGAGG...............................	21	1	30.00	1.00	6.00	23.00	0.00
............................................................................................CGAAACCGTCCAAAACTGAGG...............................	21	1	30.00	6.00	17.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACTGATG...............................	21	1	30.00	1.00	14.00	15.00	0.00
............................................................................................TGAAACCGTCCAGAACTGAGGC..............................	22	1	30.00	2.00	15.00	12.00	1.00
...........................................................................................CTGAAACCGTCCAAAACTGAGG...............................	22	1	30.00	2.00	18.00	10.00	0.00
............................................................................................TGAGACCGTCCAAAACTGAGG...............................	21	1	29.00	3.00	16.00	10.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGCC..............................	22	1	28.00	3.00	22.00	3.00	0.00
............................................................................................TGAAACCGCCCAAAACTGAGGC..............................	22	1	27.00	1.00	21.00	5.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGT...............................	21	1	27.00	1.00	19.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACCGAGGC..............................	22	1	27.00	1.00	17.00	9.00	0.00
............................................................................................TGAAACCGTCCAAAACTCAGG...............................	21	1	25.00	1.00	20.00	4.00	0.00
............................................................................................TGAAACCGTCCAAGACTGAGGC..............................	22	1	25.00	2.00	14.00	9.00	0.00
............................................................................................TGAAACAGTCCAAAACTGAGG...............................	21	1	24.00	0.00	17.00	7.00	0.00
............................................................................................TGAAACTGTCCAAAACTGAGGC..............................	22	1	24.00	2.00	13.00	9.00	0.00
............................................................................................TGAAACCGCCCAAAACTGAGG...............................	21	1	24.00	0.00	22.00	2.00	0.00
............................................................................................TGAAACCGTCCGAAACTGAGG...............................	21	1	24.00	0.00	21.00	3.00	0.00
............................................................................................TGAAACCGTCCAAAGCTGAGG...............................	21	1	24.00	4.00	15.00	5.00	0.00
............................................................................................TGAAGCCGTCCAAAACTGAGG...............................	21	1	23.00	3.00	12.00	8.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGGCC.............................	23	1	23.00	2.00	13.00	8.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGA...............................	21	1	22.00	2.00	14.00	6.00	0.00
............................................................................................TGAAACCGTCCAAAACTCAGGC..............................	22	1	22.00	1.00	15.00	6.00	0.00
............................................................................................TGAAACCGTCCAAAAATGAGGC..............................	22	1	22.00	0.00	18.00	4.00	0.00
............................................................................................TGAAACCGTCCAAAACTAAGGC..............................	22	1	22.00	0.00	16.00	6.00	0.00
............................................................................................TGAAACCGTACAAAACTGAGGC..............................	22	1	22.00	3.00	9.00	9.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGGCG.............................	23	1	21.00	1.00	15.00	5.00	0.00
............................................................................................TGAAACCATCCAAAACTGAGGC..............................	22	1	21.00	3.00	12.00	6.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGC...............................	21	1	21.00	1.00	17.00	3.00	0.00
............................................................................................TAAAACCGTCCAAAACTGAGGC..............................	22	1	21.00	3.00	12.00	6.00	0.00
............................................................................................TGACACCGTCCAAAACTGAGGC..............................	22	1	20.00	0.00	10.00	10.00	0.00
............................................................................................TGAGACCGTCCAAAACTGAGGC..............................	22	1	19.00	0.00	14.00	5.00	0.00
............................................................................................TGAAACCGTCCAAGACTGAGG...............................	21	1	19.00	2.00	13.00	4.00	0.00
............................................................................................TGACACCGTCCAAAACTGAGG...............................	21	1	19.00	1.00	5.00	13.00	0.00
............................................................................................TGAAACCGTCCGAAACTGAGGC..............................	22	1	19.00	0.00	15.00	4.00	0.00
............................................................................................TGAAACCGTCCAAAACTTAGGC..............................	22	1	18.00	0.00	7.00	11.00	0.00
............................................................................................TGAAACCGTCCAAAACTTAGG...............................	21	1	18.00	2.00	9.00	7.00	0.00
............................................................................................TGAAACCGTCCATAACTGAGTC..............................	22	1	18.00	0.00	13.00	5.00	0.00
............................................................................................TGAAACCGTCCAAAACGGAGGC..............................	22	1	18.00	0.00	12.00	6.00	0.00
............................................................................................TGAAACAGTCCAAAACTGAGGC..............................	22	1	17.00	0.00	10.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACTGGGG...............................	21	1	17.00	0.00	14.00	3.00	0.00
............................................................................................TGAAACCGTCCTAAACTGAGGC..............................	22	1	17.00	0.00	11.00	6.00	0.00
............................................................................................TGAAACTGTCCAAAACTGAGG...............................	21	1	17.00	1.00	10.00	6.00	0.00
............................................................................................TGAAACCGACCAAAACTGAGGC..............................	22	1	17.00	0.00	16.00	1.00	0.00
............................................................................................TGAAACCATCCAAAACTGAGG...............................	21	1	17.00	0.00	12.00	5.00	0.00
............................................................................................TGAAACCGTCCCACACTGAGGC..............................	22	1	16.00	0.00	2.00	14.00	0.00
............................................................................................TGAAACCGTCAAAAACTGAGG...............................	21	1	16.00	3.00	11.00	2.00	0.00
............................................................................................TGAAACCGTCCAAAACAGAGG...............................	21	1	15.00	1.00	11.00	3.00	0.00
...........................................CTTAGTTTTAGACGTGTTTTGGT..............................................................................	23	1	15.00	7.00	4.00	4.00	0.00
............................................................................................TGAAACCGTCCTAAACTGAGG...............................	21	1	15.00	0.00	11.00	4.00	0.00
............................................................................................TGAAACCGTCCAGAACTGAGG...............................	21	1	15.00	3.00	8.00	4.00	0.00
.............................................................................................GAAACCGTCCAAAACTGAGG...............................	20	1	14.00	2.00	10.00	2.00	0.00
............................................................................................TGAAACCGTCCAAAACTAAGG...............................	21	1	14.00	3.00	6.00	5.00	0.00
............................................................................................AGAAACCGTCCAAAACTGAGGC..............................	22	1	14.00	0.00	7.00	7.00	0.00
............................................................................................TGAAACCGTCCAAAACTGGGGC..............................	22	1	14.00	0.00	10.00	4.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAAGC..............................	22	1	14.00	0.00	6.00	8.00	0.00
............................................................................................TGAAACCGTCCAAAAATGAGG...............................	21	1	14.00	1.00	8.00	4.00	1.00
............................................................................................TGAAAACGTCCAAAACTGAGGC..............................	22	1	14.00	0.00	10.00	4.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAAG...............................	21	1	13.00	1.00	5.00	7.00	0.00
............................................................................................TGAAACCGTCCAATACTGAGGC..............................	22	1	13.00	0.00	11.00	2.00	0.00
............................................................................................TGAAACCGTCCATAACTGGGG...............................	21	1	13.00	0.00	12.00	1.00	0.00
............................................................................................TGAAACCGTCAAAAACTGAGGC..............................	22	1	13.00	1.00	9.00	3.00	0.00
............................................................................................TGAAACCGGCCAAAACGGAGGC..............................	22	1	13.00	0.00	8.00	5.00	0.00
............................................................................................TGGAACCGTCCATAACTGAGGC..............................	22	1	13.00	0.00	6.00	7.00	0.00
.............................................................................................GAAACCGTCCAAAACTGAGGC..............................	21	1	13.00	1.00	10.00	2.00	0.00
............................................................................................TGAAACCGTCCAAAACTGAGAC..............................	22	1	12.00	1.00	8.00	3.00	0.00
............................................................................................TAAAACCGTCCAAAACTGAGG...............................	21	1	12.00	6.00	4.00	2.00	0.00
............................................................................................TGGAACCGTCCAAAACTGAGGC..............................	22	1	12.00	0.00	8.00	4.00	0.00
............................................................................................GGAAACCGTCCAAAACTGAGGC..............................	22	1	12.00	0.00	7.00	5.00	0.00

droGri2

T-----------------------------ACCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTTGGG-AGTT--TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GTGGTAAAAGCATCCATTACAA	Size	Hit Count	Total Norm	V109 Male body
............................................................................................TGAAACCGTCCAAAACTGAGGC..............................	22	1	225.00	225.00
............................................................................................TGAAACCGTCCAAAACTGAGG...............................	21	1	126.00	126.00
............................................................................................TGAAACCGTCCAAAACTGAGGCT.............................	23	1	4.00	4.00
............................................................................................TGAAAGCGTCCAAAACTGAGGC..............................	22	1	2.00	2.00
............................................................................................TGAAACCGTCCAAAACTCAGGC..............................	22	1	2.00	2.00
............................................................................................TGAAACCGTCCAAAACTAAGGC..............................	22	1	2.00	2.00
............................................................................................TGAAACCGTCCAAAACTTAGG...............................	21	1	2.00	2.00
............................................................................................TGAAACCGCCCAAAACTGAGG...............................	21	1	2.00	2.00
............................................................................................TGAAACCGTCCAAAACTGACGC..............................	22	1	2.00	2.00
............................................................................................TGAAACTGTCCAAAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGTACAAAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGGCCAAAACTAAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGGCCAAAACTGAGG...............................	21	1	1.00	1.00
............................................................................................TGCAACCGTCCAAAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGTCCAAAACTGCGG...............................	21	1	1.00	1.00
............................................................................................TGAAACCGTTCAAAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGC...............................	21	1	1.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAG................................	20	1	1.00	1.00
............................................................................................TGAAACAGTCCAAAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGTCCAAAACTGCGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGACCAAAACTGAGGCT.............................	23	1	1.00	1.00
............................................................................................TGAAACCGTCCAAAACTCAGG...............................	21	1	1.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGCC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGTCCxAAACTGAGG...............................	20	1	1.00	1.00
............................................................................................TGAAGCCGTCCAAAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCCTCCAAAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGTCTAAAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGTC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGTTCAAAACTGAGG...............................	21	1	1.00	1.00
............................................................................................TAAAACCGTCCAAAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACGGTCCAAAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGACCAAAACTGAGG...............................	21	1	1.00	1.00
............................................................................................TGAAACCGTCCAAAACTGAGGT..............................	22	1	1.00	1.00
............................................................................................TGAAAACGTCCAAAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGTCCAGAACTGAGGC..............................	22	1	1.00	1.00
............................................................................................TGGAACCGTCCAAAACTGAGG...............................	21	1	1.00	1.00
............................................................................................TGAAACCGTCCAAAACTGATGC..............................	22	1	1.00	1.00
............................................................................................TGAAACCGTCCAAAGCTGAGGC..............................	22	1	1.00	1.00

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image