Possible Orthologs for dme-mir-957

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
10	chr3L:21812307-21812432 -	96.07	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA TTGTATCCGTAGTGTTGTCCACAATAGACCTTAATTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGTGAGCATCTATCCAAA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...........................................................................TGAAACCGTCCAAAACTGAGGC............................. 22 1 176248.00 120.00 170635.00 3400.00 2093.00 ...........................................................................TGAAACCGTCCAAAACTGAGG.............................. 21 1 29677.00 9.00 28649.00 912.00 107.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCT............................ 23 1 10385.00 0.00 10084.00 268.00 33.00 ...........................................................................TGAAACCGTCCAAAACTGA................................ 19 1 5460.00 0.00 5310.00 135.00 15.00 ...........................................................................TGAAACCGTCCAAAACTGAG............................... 20 1 4621.00 0.00 4485.00 120.00 16.00 ...........................................................................TGAAACCGTCCAAAACTGAGAC............................. 22 1 4543.00 0.00 4422.00 68.00 53.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCC............................ 23 1 1831.00 0.00 1780.00 44.00 7.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCTT........................... 24 1 1432.00 0.00 1361.00 63.00 8.00 ...........................................................................TGAAACCGTCCAAAACTG................................. 18 1 1085.00 0.00 1051.00 30.00 4.00 ...........................................................................TGAAACCGTCCAAAACTGG................................ 19 1 760.00 0.00 735.00 21.00 4.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCA............................ 23 1 656.00 1.00 632.00 20.00 3.00 ............................................................................GAAACCGTCCAAAACTGAGGC............................. 21 1 484.00 0.00 471.00 6.00 7.00 ...........................................................................TGAAGCCGTCCAAAACTGAGGC............................. 22 1 382.00 0.00 375.00 4.00 3.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCG............................ 23 1 267.00 0.00 253.00 13.00 1.00 ...........................................................................TGAAACCGTCCAAAACTGAGGT............................. 22 1 264.00 0.00 257.00 5.00 2.00 ...........................................................................TGAAACCGTCCAAAACTGAGGG............................. 22 1 223.00 0.00 203.00 11.00 9.00 ...........................................................................TGAAACCGTCCAAAGCTGAGGC............................. 22 1 217.00 0.00 211.00 4.00 2.00 ...........................................................................TGAAACCGTCCAAAACTGGGGC............................. 22 1 213.00 0.00 204.00 7.00 2.00 ...........................................................................TGAAACCGTCCAAGACTGAGGC............................. 22 1 211.00 0.00 198.00 13.00 0.00 ...........................................................................TTAAACCGTCCAAAACTGAGGC............................. 22 1 193.00 0.00 186.00 4.00 3.00 ...........................................................................TGAAACCGTCCAAAACTGAC............................... 20 1 193.00 0.00 187.00 6.00 0.00 ...........................................................................TGAAACCGCCCAAAACTGAGGC............................. 22 1 183.00 0.00 176.00 4.00 3.00 ...........................................................................TCAAACCGTCCAAAACTGAGGC............................. 22 1 160.00 0.00 152.00 4.00 4.00 .............................................................................AAACCGTCCAAAACTGAGGC............................. 20 1 158.00 0.00 148.00 4.00 6.00 ...........................................................................TGAAACCGGCCAAAACTGAGGC............................. 22 1 144.00 0.00 141.00 0.00 3.00 ...........................................................................TAAAACCGTCCAAAACTGAGGC............................. 22 1 137.00 0.00 131.00 3.00 3.00 ...........................................................................TGAAACCGTCCAAGACTGAGG.............................. 21 1 119.00 0.00 113.00 6.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGAGGA............................. 22 1 112.00 1.00 108.00 2.00 1.00 ...........................................................................TGAAACCATCCAAAACTGAGGC............................. 22 1 99.00 0.00 96.00 3.00 0.00 ...........................................................................CGAAACCGTCCAAAACTGAGGC............................. 22 1 90.00 0.00 83.00 2.00 5.00 ...........................................................................TGGAACCGTCCAAAACTGAGGC............................. 22 1 89.00 0.00 87.00 2.00 0.00 ...........................................................................TGAAACCGTCCAAAACTTAGGC............................. 22 1 82.00 0.00 79.00 0.00 3.00 ...........................................................................TGAAACCGTCCAAAAATGAGGC............................. 22 1 71.00 1.00 69.00 0.00 1.00 ...........................................................................TGAAGCCGTCCAAAACTGAGG.............................. 21 1 68.00 0.00 66.00 1.00 1.00 ...........................................................................TGAAACCGTCCAAAACTAAGGC............................. 22 1 63.00 0.00 62.00 0.00 1.00 ............................................................................GAAACCGTCCAAAACTGAGG.............................. 20 1 63.00 0.00 62.00 1.00 0.00 ...........................................................................TGAAACTGTCCAAAACTGAGGC............................. 22 1 62.00 0.00 61.00 1.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGAGT.............................. 21 1 62.00 0.00 59.00 1.00 2.00 ...........................................................................TGAAACCGTCCAAAACTGAGA.............................. 21 1 60.00 0.00 58.00 2.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGAGGAA............................ 23 1 59.00 0.00 57.00 2.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCCT........................... 24 1 59.00 0.00 57.00 2.00 0.00 ...........................................................................TGAAACCGTCCAAAGCTGAGG.............................. 21 1 55.00 0.00 54.00 1.00 0.00 ...........................................................................TGAGACCGTCCAAAACTGAGGC............................. 22 1 50.00 0.00 50.00 0.00 0.00 ...........................................................................TGAAACCGTCCxAAACTGAGGC............................. 21 1 48.00 0.00 46.00 0.00 2.00 ...........................................................................TGAAACCGTCAAAAACTGAGGC............................. 22 1 44.00 0.00 43.00 1.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGACG.............................. 21 1 43.00 0.00 43.00 0.00 0.00 ...........................................................................TTAAACCGTCCAAAACTGAGG.............................. 21 1 42.00 0.00 41.00 1.00 0.00 ...........................................................................TGAAACCGTCCAAAACTCAGGC............................. 22 1 42.00 0.00 41.00 1.00 0.00 ...........................................................................AGAAACCGTCCAAAACTGAGGC............................. 22 1 40.00 0.00 36.00 1.00 3.00 ...........................................................................TGAAACCGTCCAAAACCGAGGC............................. 22 1 40.00 0.00 38.00 0.00 2.00 ...........................................................................TGAAACCGTCTAAAACTGAGGC............................. 22 1 39.00 1.00 38.00 0.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGAGC.............................. 21 1 39.00 0.00 38.00 1.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGAA............................... 20 1 38.00 0.00 37.00 1.00 0.00 ..............................................................................AACCGTCCAAAACTGAGGC............................. 19 1 37.00 0.00 36.00 0.00 1.00 ...........................................................................TGAAACCGTCCAAAACTGAAGC............................. 22 1 35.00 0.00 34.00 0.00 1.00 ...........................................................................TGAAACCGTCCAAAACTGTGG.............................. 21 1 35.00 0.00 34.00 1.00 0.00 ...........................................................................TGAAATCGTCCAAAACTGAGGC............................. 22 1 34.00 0.00 31.00 1.00 2.00 ...........................................................................TGAAACCGACCAAAACTGAGGC............................. 22 1 33.00 0.00 31.00 0.00 2.00 ...........................................................................TGAAACCGTCCAAAACTGATGC............................. 22 1 30.00 0.00 29.00 0.00 1.00 ...........................................................................TGAAACAGTCCAAAACTGAGGC............................. 22 1 29.00 0.00 25.00 1.00 3.00 ...........................................................................TGAAACCGTTCAAAACTGAGGC............................. 22 1 28.00 0.00 27.00 1.00 0.00 ...........................................................................TCAAACCGTCCAAAACTGAGG.............................. 21 1 28.00 0.00 26.00 2.00 0.00 ...........................................................................TGAAACCGCCCAAAACTGAGG.............................. 21 1 27.00 0.00 25.00 2.00 0.00 ..........................................................................CTGAAACCGTCCAAAACTGAGGC............................. 23 1 26.00 0.00 24.00 0.00 2.00 ...........................................................................TGAAACCGTCCAGAACTGAGGC............................. 22 1 26.00 0.00 26.00 0.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGTGAC............................. 22 1 25.00 0.00 25.00 0.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGT................................ 19 1 24.00 0.00 24.00 0.00 0.00 ...........................................................................TGAAGCCGTCCAAAACTGAG............................... 20 1 24.00 0.00 22.00 1.00 1.00 .............................................................................AAACCGTCCAAAACTGAGG.............................. 19 1 23.00 0.00 21.00 1.00 1.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCAT........................... 24 1 23.00 0.00 22.00 1.00 0.00 ...........................................................................TGAAACCGGCCAAAACTGAGG.............................. 21 1 23.00 0.00 21.00 2.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGACGC............................. 22 1 22.00 0.00 21.00 0.00 1.00 ...........................................................................TGAAACCGTCCAAAATTGAGGC............................. 22 1 21.00 0.00 21.00 0.00 0.00 ...........................................................................TGAAACCTTCCAAAACTGAGG.............................. 21 1 21.00 0.00 21.00 0.00 0.00 ...........................................................................TGAAAACGTCCAAAACTGAGGC............................. 22 1 21.00 3.00 16.00 2.00 0.00 ...........................................................................TGAAGCCGTCCAAAACTGAGGCT............................ 23 1 20.00 0.00 19.00 1.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGAGCC............................. 22 1 20.00 0.00 19.00 1.00 0.00 ...........................................................................TGAAACCGTCCGAAACTGAGGC............................. 22 1 20.00 0.00 19.00 1.00 0.00 ...........................................................................TGAAACCATCCAAAACTGAGG.............................. 21 1 19.00 0.00 19.00 0.00 0.00 ............................................................................TGAACCGTCCAAAACTGAGGC............................. 21 1 19.00 0.00 19.00 0.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGGGG.............................. 21 1 19.00 0.00 18.00 1.00 0.00 ............................................................................TAAACCGTCCAAAACTGAGGC............................. 21 1 19.00 0.00 19.00 0.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGAGGAC............................ 23 1 19.00 0.00 18.00 1.00 0.00 ...........................................................................GGAAACCGTCCAAAACTGAGGC............................. 22 1 18.00 0.00 16.00 1.00 1.00 ...........................................................................TAAAACCGTCCAAAACTGAGG.............................. 21 1 18.00 0.00 18.00 0.00 0.00 ...........................................................................TGAAACCGTGCAAAACTGAGGC............................. 22 1 17.00 0.00 17.00 0.00 0.00 ...........................................................................CGAAACCGTCCAAAACTGAGG.............................. 21 1 15.00 0.00 15.00 0.00 0.00 ...........................................................................TGAAACCGTCCAAGACTGAG............................... 20 1 15.00 0.00 15.00 0.00 0.00 ...........................................................................TGAAACCGTCCxxAACTGAGGC............................. 20 1 15.00 0.00 14.00 1.00 0.00 ...........................................................................TGGAACCGTCCAAAACTGAGG.............................. 21 1 15.00 0.00 14.00 1.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGCGGC............................. 22 1 14.00 0.00 14.00 0.00 0.00 ...........................................................................TGAAACCGTCCAAACCTGAGGC............................. 22 1 14.00 0.00 14.00 0.00 0.00 ...........................................................................TGAAACCGTCCAACACTGAGGC............................. 22 1 14.00 1.00 13.00 0.00 0.00 ...........................................................................TGAAACCGTCCxAAACTGAGG.............................. 20 1 14.00 0.00 13.00 1.00 0.00 ...........................................................................TGAAGCCGTCCAAAACTGA................................ 19 1 14.00 0.00 14.00 0.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCAA........................... 24 1 13.00 0.00 13.00 0.00 0.00 ...........................................................................TGAAACCCTCCAAAACTGAGGC............................. 22 1 13.00 0.00 13.00 0.00 0.00 ...........................................................................TGAAGCCGTCCAAAACTGAGAC............................. 22 1 13.00 0.00 13.00 0.00 0.00 ...........................................................................TGAAACCGTACAAAACTGAGGC............................. 22 1 13.00 0.00 12.00 1.00 0.00 ...........................................................................TGAAACTGTCCAAAACTGAGG.............................. 21 1 13.00 0.00 13.00 0.00 0.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
14	super_11:2446955-2447080 -	96.85	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA TTGTATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGTGAGCATCTATCCAAA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ...........................................................................TGAAACCGTCCAAAACTGAGG.............................. 21 1 32694.00 3310.00 94.00 29290.00 ...........................................................................TGAAACCGTCCAAAACTGAGGC............................. 22 1 27699.00 2496.00 799.00 24404.00 ...........................................................................TGAAACCGTCCAAAACTGAG............................... 20 1 1455.00 201.00 2.00 1252.00 ...........................................................................TGAAACCGTCCAAAACTGAGGA............................. 22 1 382.00 22.00 2.00 358.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCA............................ 23 1 330.00 41.00 0.00 289.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCT............................ 23 1 263.00 23.00 0.00 240.00 ...........................................................................TGAAACCGTCCAAAACTGA................................ 19 1 154.00 2.00 0.00 152.00 ...........................................................................TGAAACCGTCCAAAACTGAGGT............................. 22 1 104.00 16.00 0.00 88.00 ...........................................................................TGAAACCGTCCAAAACTGAGA.............................. 21 1 84.00 4.00 0.00 80.00 ..........................................................................CTGAAACCGTCCAAAACTGAGG.............................. 22 1 75.00 7.00 0.00 68.00 ...........................................................................TGAAACCGTCCAAAACTGCGG.............................. 21 1 70.00 25.00 0.00 45.00 ..........................................................................CTGAAACCGTCCAAAACTGAGGC............................. 23 1 64.00 3.00 1.00 60.00 ...........................................................................TGAAACCGTCCAAAACTTAGG.............................. 21 1 61.00 8.00 0.00 53.00 ...........................................................................TGAAACAGTCCAAAACTGAGG.............................. 21 1 60.00 1.00 0.00 59.00 ...........................................................................TGAAACCTTCCAAAACTGAGG.............................. 21 1 59.00 6.00 0.00 53.00 ...........................................................................TGAAGCCGTCCAAAACTGAGG.............................. 21 1 57.00 7.00 0.00 50.00 .............................CTTAGTTTTCGACGTGTTTTGGT.......................................................................... 23 1 56.00 11.00 18.00 27.00 ...........................................................................TGAAACCATCCAAAACTGAGG.............................. 21 1 53.00 1.00 0.00 52.00 ...........................................................................TGAAACCGTCCAAAACTAAGG.............................. 21 1 52.00 4.00 0.00 48.00 ...........................................................................TGAAACCGTCCAAAACTGCGGC............................. 22 1 50.00 21.00 1.00 28.00 ...........................................................................TAAAACCGTCCAAAACTGAGG.............................. 21 1 50.00 5.00 0.00 45.00 ...........................................................................TAAAACCGTCCAAAACTGAGGC............................. 22 1 49.00 3.00 1.00 45.00 ...........................................................................TGAAACCGTCCAAACCTGAGGC............................. 22 1 47.00 1.00 3.00 43.00 ...........................................................................TGAAACCGTCCAAAACTCAGG.............................. 21 1 47.00 9.00 0.00 38.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCTT........................... 24 1 47.00 4.00 0.00 43.00 ...........................................................................TGAAACCATCCAAAACTGAGGC............................. 22 1 45.00 1.00 0.00 44.00 ...........................................................................TGAAACCGTCCAAAACTGAGCC............................. 22 1 44.00 7.00 2.00 35.00 ...........................................................................TGAAACCGTCCxAAACTGAGG.............................. 20 1 44.00 6.00 1.00 37.00 ...........................................................................TGAAACCGTCCAAAACTGAAG.............................. 21 1 44.00 0.00 0.00 44.00 ...........................................................................TGAAACAGTCCAAAACTGAGGC............................. 22 1 43.00 1.00 0.00 42.00 ...........................................................................TGAAACCGTCCAAAGCTGAGGC............................. 22 1 43.00 4.00 1.00 38.00 ...........................................................................TGAAACCGTACAAAACTGAGG.............................. 21 1 42.00 1.00 0.00 41.00 ...........................................................................TGAAACCGTCCAAAGCTGAGG.............................. 21 1 42.00 6.00 1.00 35.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCC............................ 23 1 41.00 1.00 1.00 39.00 ...........................................................................TGAAACCGTCCAAACCTGAGG.............................. 21 1 41.00 0.00 0.00 41.00 ...........................................................................TGAAACCGTCCAAAACTGGGG.............................. 21 1 40.00 13.00 0.00 27.00 ...........................................................................TGAAACCGCCCAAAACTGAGG.............................. 21 1 39.00 7.00 1.00 31.00 ...........................................................................TGAAACCGTCCAAAACTAAGGC............................. 22 1 37.00 3.00 0.00 34.00 ...........................................................................TGAAACCGTCCAAAACTGATG.............................. 21 1 37.00 1.00 0.00 36.00 ...........................................................................TGAAAACGTCCAAAACTGAGG.............................. 21 1 37.00 0.00 0.00 37.00 ...........................................................................CGAAACCGTCCAAAACTGAGG.............................. 21 1 36.00 2.00 0.00 34.00 ...........................................................................TGAAACCGTCCAAAACTTAGGC............................. 22 1 36.00 4.00 0.00 32.00 ...........................................................................TGAAGCCGTCCAAAACTGAGGC............................. 22 1 35.00 4.00 1.00 30.00 ............................................................................GAAACCGTCCAAAACTGAGG.............................. 20 1 35.00 5.00 0.00 30.00 ...........................................................................TGAAACCGCCCAAAACTGAGGC............................. 22 1 34.00 3.00 3.00 28.00 ...........................................................................TGAAAACGTCCAAAACTGAGGC............................. 22 1 34.00 0.00 0.00 34.00 ...........................................................................TGAAACCGTCCAAAACTGAGC.............................. 21 1 32.00 6.00 0.00 26.00 ...........................................................................TGAAACCGTCCAAAACTGGGGC............................. 22 1 32.00 16.00 0.00 16.00 ...........................................................................TGAAACCGTCCxAAACTGAGGC............................. 21 1 31.00 1.00 2.00 28.00 ...........................................................................TTAAACCGTCCAAAACTGAGG.............................. 21 1 30.00 3.00 0.00 27.00 ...........................................................................CGAAACCGTCCAAAACTGAGGC............................. 22 1 30.00 1.00 3.00 26.00 ...........................................................................TGAGACCGTCCAAAACTGAGG.............................. 21 1 30.00 7.00 0.00 23.00 ...........................................................................TGAAACCTTCCAAAACTGAGGC............................. 22 1 29.00 1.00 0.00 28.00 ...........................................................................TGAAACCGTCCAACACTGAGGC............................. 22 1 27.00 4.00 0.00 23.00 ...........................................................................TGAAACTGTCCAAAACTGAGGC............................. 22 1 27.00 2.00 5.00 20.00 ...........................................................................TGAAACCGTCCAAAACTGAGT.............................. 21 1 27.00 3.00 0.00 24.00 ...........................................................................TGAAACCGTCCAAGACTGAGG.............................. 21 1 26.00 2.00 0.00 24.00 ...........................................................................TGAAACCGTCCAAAACTGAGTC............................. 22 1 26.00 2.00 0.00 24.00 ...........................................................................TGAAACCGTCCAAAACTGACG.............................. 21 1 25.00 2.00 0.00 23.00 ...........................................................................TGAAACCGTACAAAACTGAGGC............................. 22 1 25.00 0.00 0.00 25.00 ...........................................................................TGAAACTGTCCAAAACTGAGG.............................. 21 1 25.00 1.00 0.00 24.00 ...........................................................................TGAAACCGTCCAAAACTGAGAC............................. 22 1 25.00 3.00 2.00 20.00 ...........................................................................TGAAACCGTCCAAAACTGATGC............................. 22 1 24.00 1.00 0.00 23.00 ...........................................................................TGAAACCGTCCAAGACTGAGGC............................. 22 1 24.00 2.00 0.00 22.00 ...........................................................................TGAAACCGTCCAAAACCGAGG.............................. 21 1 24.00 4.00 0.00 20.00 ...........................................................................TGGAACCGTCCAAAACTGAGG.............................. 21 1 24.00 3.00 0.00 21.00 ...........................................................................TGGAACCGTCCAAAACTGAGGC............................. 22 1 24.00 2.00 0.00 22.00 ...........................................................................TGAAACCGTCCAACACTGAGG.............................. 21 1 23.00 1.00 0.00 22.00 ...........................................................................TGAAACCGTCCxxAACTGAGG.............................. 19 1 23.00 1.00 0.00 22.00 ...........................................................................TGAAACCGTCAAAAACTGAGG.............................. 21 1 23.00 0.00 0.00 23.00 ...........................................................................TGAAACCGTCCAAAACCGAGGC............................. 22 1 23.00 2.00 1.00 20.00 ...........................................................................TGAAACCGTCCAAAACTGAAGC............................. 22 1 23.00 1.00 0.00 22.00 ...........................................................................TTAAACCGTCCAAAACTGAGGC............................. 22 1 22.00 3.00 0.00 19.00 .............................CTTAGTTTTCGACGTGTTTTGG........................................................................... 22 1 22.00 6.00 2.00 14.00 ...........................................................................TGAGACCGTCCAAAACTGAGGC............................. 22 1 21.00 3.00 1.00 17.00 ...........................................................................TGAAACCGACCAAAACTGAGGC............................. 22 1 20.00 1.00 0.00 19.00 .............................................................................AAACCGTCCAAAACTGAGG.............................. 19 1 20.00 1.00 0.00 19.00 ...........................................................................TCAAACCGTCCAAAACTGAGG.............................. 21 1 20.00 2.00 0.00 18.00 ...........................................................................TGAAACCGACCAAAACTGAGG.............................. 21 1 20.00 0.00 0.00 20.00 ...........................................................................TGAAACCGTCCAAAACTCAGGC............................. 22 1 20.00 5.00 0.00 15.00 ...........................................................................TGAAACCCTCCAAAACTGAGG.............................. 21 1 20.00 2.00 0.00 18.00 ...........................................................................AGAAACCGTCCAAAACTGAGGC............................. 22 1 20.00 0.00 0.00 20.00 ...........................................................................TGAAACCGTTCAAAACTGAGG.............................. 21 1 19.00 3.00 0.00 16.00 ...........................................................................TGAAACCGTCCAAAACTGTGGC............................. 22 1 19.00 17.00 0.00 2.00 ...........................................................................TGAAACCGTCCGAAACTGAGGC............................. 22 1 18.00 3.00 0.00 15.00 ...........................................................................TGAAACCCTCCAAAACTGAGGC............................. 22 1 18.00 0.00 1.00 17.00 ...........................................................................TGAAACCGTTCAAAACTGAGGC............................. 22 1 17.00 0.00 4.00 13.00 ...........................................................................TGAAACCGTCCCAAACTGAGG.............................. 21 1 17.00 2.00 0.00 15.00 ...........................................................................AGAAACCGTCCAAAACTGAGG.............................. 21 1 17.00 0.00 0.00 17.00 ...........................................................................TGAAACCGTCCGAAACTGAGG.............................. 21 1 17.00 3.00 0.00 14.00 ...........................................................................TGAAACCGTCCAAAACTGACGC............................. 22 1 16.00 0.00 0.00 16.00 ...........................................................................TGAAACCGTCCCAAACTGAGGC............................. 22 1 16.00 1.00 0.00 15.00 ...........................................................................TGAAACCGTCAAAAACTGAGGC............................. 22 1 16.00 1.00 0.00 15.00 ...........................................................................TGAAACCGTCCAAAACTAGG............................... 20 1 15.00 3.00 0.00 12.00 .............................................................................AAACCGTCCAAAACTGAGGC............................. 20 1 15.00 0.00 0.00 15.00 ...........................................................................TGAAACCGTCCxxAACTGAGGC............................. 20 1 15.00 0.00 2.00 13.00 ...........................................................................TGAAACCGTCCAAAACTGTGG.............................. 21 1 15.00 11.00 0.00 4.00 ...........................................................................TGAAACCGTCCAAAATTGAGG.............................. 21 1 14.00 2.00 0.00 12.00 ...........................................................................TGAAACCGTCCAAAACTG................................. 18 1 14.00 0.00 0.00 14.00 ...........................................................................TGAAATCGTCCAAAACTGAGGC............................. 22 1 14.00 1.00 3.00 10.00 ...........................................................................TGAAACCGTCCAAAAATGAGG.............................. 21 1 14.00 2.00 0.00 12.00

droYak2 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
28	chr3L:22973852-22973977 -	95.29	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA TCATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGTGAGCAACTATCCAAA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...........................................................................TGAAACCGTCCAAAACTGAGGC............................. 22 2 48270.00 20.50 1668.50 453.00 5230.50 40897.50 ...........................................................................TGAAACCGTCCAAAACTGAGG.............................. 21 2 10963.00 1.00 1305.50 567.00 4168.00 4921.50 ...........................................................................TGAAACCGTCCAAAACTGAGGCT............................ 23 2 2376.50 0.00 29.00 6.00 108.50 2233.00 ...........................................................................TGAAACCGTCCAAAACTGAGAC............................. 22 2 1084.50 0.00 1.50 1.00 6.50 1075.50 ...........................................................................TGAAACCGTCCAAAACTGAG............................... 20 2 909.50 0.00 62.00 30.00 225.50 592.00 ...........................................................................TGAAACCGTCCAAAACTGA................................ 19 2 588.50 0.00 8.00 0.00 18.50 562.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCC............................ 23 2 490.00 0.00 5.50 0.50 10.50 473.50 ...........................................................................TGAAACCGTCCAAAACTGAGGCA............................ 23 2 293.00 0.00 39.00 7.50 130.00 116.50 ...........................................................................TGAAACCGTCCAAAACTGAGGCTT........................... 24 2 267.00 0.00 3.00 0.00 10.00 254.00 ...........................................................................TGAAACCGTCCAAAACTG................................. 18 2 191.50 0.00 0.00 0.00 0.00 191.50 ...........................................................................TGAAACCGTCCAAAACTGCGGC............................. 22 2 156.50 0.00 4.00 0.00 58.50 94.00 ...........................................................................TGAAACCGTCCAAACCTGAGGC............................. 22 2 118.50 0.00 6.00 1.00 110.00 1.50 ...........................................................................TGAAACCGTCCCAAACTGAGGC............................. 22 2 114.50 0.00 19.50 0.00 47.00 48.00 ...........................................................................TGAAACCGTCCAACACTGAGGC............................. 22 2 105.00 0.50 12.50 0.50 90.50 1.00 ...........................................................................TGAAACCGTCCAAACCTGAGG.............................. 21 2 102.00 0.00 4.50 1.50 96.00 0.00 ............................................................................GAAACCGTCCAAAACTGAGGC............................. 21 2 98.50 0.00 2.50 0.00 1.50 94.50 ...........................................................................TGAAACCGTCCACAACTGAGGC............................. 22 2 97.50 0.00 11.00 1.00 84.50 1.00 ...........................................................................TGAAACCGTCCAAAACTGCGG.............................. 21 2 97.00 0.00 4.00 1.00 81.50 10.50 ...........................................................................TGAAACCGTCCAAAACTGG................................ 19 2 94.00 0.00 0.00 0.00 0.00 94.00 ...........................................................................TGAAGCCGTCCAAAACTGAGGC............................. 22 2 90.00 0.00 4.00 0.00 11.50 74.50 ...........................................................................TGAAACCGTCCAACACTGAGG.............................. 21 2 88.50 0.00 6.00 0.00 82.50 0.00 ...........................................................................TGAAACCGCCCAAAACTGAGGC............................. 22 2 83.00 0.00 1.00 0.00 16.50 65.50 ...........................................................................TGAAACCGTCCAAAGCTGAGGC............................. 22 2 72.50 0.00 4.50 0.00 16.50 51.50 ...........................................................................TGAAACCGTCCCAAACTGAGG.............................. 21 2 71.50 0.00 19.00 0.00 45.00 7.50 ...........................................................................TGAAACCGTCCACAACTGAGG.............................. 21 2 69.50 0.00 7.50 1.50 60.50 0.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCG............................ 23 2 66.50 0.00 2.50 0.00 4.00 60.00 ...........................................................................TGAAACCGTCCAAAACTGAGGT............................. 22 2 66.50 0.00 8.50 2.50 27.00 28.50 ...........................................................................TGAAACCGTCCAAAACTGAGGG............................. 22 2 62.00 0.00 1.50 0.00 1.00 59.50 ...........................................................................TGAAACCGTCCAAAACTGGGGC............................. 22 2 60.00 0.00 1.00 0.00 9.00 50.00 ...........................................................................TGAAACCGTCCAAAACTGAGGA............................. 22 2 57.50 0.00 7.50 0.50 27.00 22.50 ...........................................................................TGAAACCGTCCAAGACTGAGGC............................. 22 2 55.00 0.50 3.00 0.00 11.50 40.00 ...........................................................................TGAAACCGGCCAAAACTGAGGC............................. 22 2 51.00 0.00 4.50 0.00 37.00 9.50 ...........................................................................TGAAACCGTCCATAACTGAGG.............................. 21 2 50.00 0.00 7.00 0.00 42.50 0.50 ...........................................................................TGAAACCGTCCAAAACTGAGTC............................. 22 2 45.00 0.00 6.00 1.00 34.00 4.00 ...........................................................................TGAAACCGTCCATAACTGAGGC............................. 22 2 43.50 0.00 6.00 0.00 36.50 1.00 .............................................................................AAACCGTCCAAAACTGAGGC............................. 20 2 41.00 0.00 0.50 0.00 0.50 40.00 ...........................................................................TTAAACCGTCCAAAACTGAGGC............................. 22 2 38.50 0.00 0.00 0.00 3.00 35.50 ...........................................................................TCAAACCGTCCAAAACTGAGGC............................. 22 2 38.50 0.00 0.00 0.50 3.00 35.00 ...........................................................................CGAAACCGTCCAAAACTGAGGC............................. 22 2 37.50 0.00 3.50 1.50 10.50 22.00 ...........................................................................TGAAACCGTCCAAAACTGAGCC............................. 22 2 31.50 0.00 1.00 3.00 17.00 10.50 ...........................................................................TAAAACCGTCCAAAACTGAGGC............................. 22 2 31.50 0.00 1.00 0.50 5.50 24.50 ...........................................................................TGAAACCATCCAAAACTGAGGC............................. 22 2 31.00 0.00 1.50 0.00 3.50 26.00 ...........................................................................TGAAACCGGCCAAAACTGAGG.............................. 21 2 31.00 0.00 3.00 0.00 26.00 2.00 ...........................................................................TGAAACCGTCCAAAACTCAGGC............................. 22 2 30.00 0.00 1.50 1.00 15.50 12.00 ...........................................................................TGAAACCGTCCAAAACTAAGGC............................. 22 2 29.50 0.00 1.00 1.00 10.00 17.50 ...........................................................................TGAAACCGTCCAAAACTGATGC............................. 22 2 27.00 0.00 4.00 0.00 19.00 4.00 ...........................................................................TGAAACCGTCCAAAGCTGAGG.............................. 21 2 26.00 0.00 2.50 1.00 16.50 6.00 ...........................................................................TGGAACCGTCCAAAACTGAGGC............................. 22 2 25.50 0.00 1.00 0.00 9.00 15.50 ...........................................................................TGAAACCGTCCAAAACTGAC............................... 20 2 25.50 0.00 0.50 0.00 0.00 25.00 ...........................................................................TGAAACCGTCCGAAACTGAGGC............................. 22 2 25.00 0.00 1.50 0.00 18.50 5.00 ...........................................................................TGAAACAGTCCAAAACTGAGGC............................. 22 2 25.00 0.00 0.50 0.00 6.50 18.00 ...........................................................................TGAAACCGTCCAAAACTCAGG.............................. 21 2 24.00 0.00 1.50 3.50 19.00 0.00 ...........................................................................TGAAACCGTCTAAAACTGAGGC............................. 22 2 23.50 0.00 11.50 0.00 4.50 7.50 ...........................................................................TGAAACCGTCCAAAACTGACG.............................. 21 2 23.50 0.00 6.00 0.50 12.00 5.00 ...........................................................................TGAAACCGTCCAAGACTGAGG.............................. 21 2 23.00 0.00 2.50 1.00 5.00 14.50 ...........................................................................TGAGACCGTCCAAAACTGAGGC............................. 22 2 23.00 0.00 2.50 0.00 11.50 9.00 ..........................................................................CTGAAACCGTCCAAAACTGAGGC............................. 23 2 22.50 0.00 2.00 1.50 11.00 8.00 ...........................................................................TGAAACCGTCCAAAACTGAGT.............................. 21 2 22.00 0.00 1.50 0.00 18.50 2.00 ...........................................................................TGAAACCGTCCAAAACTGATG.............................. 21 2 21.00 0.00 4.50 1.00 12.50 3.00 ...........................................................................TGAAACCGCCCAAAACTGAGG.............................. 21 2 20.50 0.00 2.00 1.50 9.50 7.50 ...........................................................................TGAAACCGTCCAGAACTGAGGC............................. 22 2 20.50 0.00 2.00 1.00 10.50 7.00 ...........................................................................TGAAACCGTCCAAAACTTAGGC............................. 22 2 19.50 0.00 0.00 2.00 4.00 13.50 ...........................................................................TGAAACCGTCCAAAACTGACGC............................. 22 2 19.50 0.00 2.50 0.00 11.00 6.00 ...........................................................................TGGAACCGTCCAAAACTGAGG.............................. 21 2 19.00 0.00 2.50 0.00 14.00 2.50 ...........................................................................TGAAACCGTCCAAAACCGAGGC............................. 22 2 19.00 0.00 2.00 1.00 8.00 8.00 ...........................................................................TGAAACCGTCCAAAAATGAGGC............................. 22 2 18.50 0.00 3.00 0.50 12.00 3.00 ...........................................................................TGAAACCGTCCAAAACTGTGG.............................. 21 2 18.50 0.00 0.00 0.00 9.00 9.50 ...........................................................................TGAAACCGTCCAAAACTGAGC.............................. 21 2 18.00 0.00 0.50 0.00 11.00 6.50 ...........................................................................TGAAACCGTCCAAAACTGAGA.............................. 21 2 17.00 0.00 2.50 0.50 9.50 4.50 ...........................................................................TGAAACCGTCCGAAACTGAGG.............................. 21 2 17.00 0.00 3.50 0.00 11.50 2.00 ...........................................................................TGAAGCCGTCCAAAACTGAGG.............................. 21 2 16.50 0.00 1.50 0.50 7.00 7.50 ...........................................................................TGAAACTGTCCAAAACTGAGGC............................. 22 2 16.00 0.00 1.50 0.00 5.00 9.50 ...........................................................................TGAAACCGTCCAAAACGGAGGC............................. 22 2 15.00 0.00 1.00 0.00 13.00 1.00 ...........................................................................TGAAACAGTCCAAAACTGAGG.............................. 21 2 15.00 0.00 2.00 0.00 9.50 3.50 ...........................................................................TGAAACCGTCCAAAACCGAGG.............................. 21 2 15.00 0.00 3.00 1.00 10.00 1.00 ...........................................................................TGAAACCGTCAAAAACTGAGGC............................. 22 2 14.00 0.00 0.00 0.00 8.00 6.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCCT........................... 24 2 14.00 0.00 0.00 0.00 1.50 12.50 ...........................................................................CGAAACCGTCCAAAACTGAGG.............................. 21 2 13.50 0.00 1.50 0.50 10.00 1.50 ...........................................................................TGAAACCGTCCxAAACTGAGGC............................. 21 2 13.50 0.00 1.00 0.50 2.00 10.00 ...........................................................................TGAAACCGTCCAAAACTGTGGC............................. 22 2 13.00 0.00 1.50 0.00 7.00 4.50 ...........................................................................TGAAACCGTCTAAAACTGAGG.............................. 21 2 13.00 0.00 10.00 0.50 2.00 0.50 ...........................................................................TGAAACCGTACAAAACTGAGGC............................. 22 2 12.50 0.00 1.50 0.00 6.50 4.50 ...........................................................................TGAAACCGTTCAAAACTGAGGC............................. 22 2 12.50 0.00 1.50 0.50 5.00 5.50 ...........................................................................TGAAACCGTCCAAAACTGGGG.............................. 21 2 12.50 0.00 0.00 0.00 7.00 5.50 ...........................................................................TAAAACCGTCCAAAACTGAGG.............................. 21 2 11.50 0.00 2.00 1.00 4.00 4.50 ...........................................................................TGAAATCGTCCAAAACTGAGGC............................. 22 2 11.50 0.00 0.50 0.50 2.00 8.50 ...........................................................................TGAAACCGTCCAGAACTGAGG.............................. 21 2 11.50 0.00 0.50 0.00 10.00 1.00 ..............................................................................AACCGTCCAAAACTGAGGC............................. 19 2 11.00 0.00 0.00 0.00 0.00 11.00 ...........................................................................TGAAACCATCCAAAACTGAGG.............................. 21 2 11.00 0.00 3.00 0.00 6.00 2.00 ...........................................................................TGAAACCTTCCAAAACTGAGG.............................. 21 2 11.00 0.00 0.00 0.00 4.00 7.00 .............................CTTAGTTTTCGACGTGTTTTGGT.......................................................................... 23 2 10.50 1.00 3.50 0.50 3.50 2.00 ..........................................................................CTGAAACCGTCCAAAACTGAGG.............................. 22 2 10.00 0.00 1.50 0.00 6.00 2.50 ...........................................................................TGACACCGTCCAAAACTGAGGC............................. 22 2 10.00 0.00 2.00 0.00 7.50 0.50 ...........................................................................TGAGACCGTCCAAAACTGAGG.............................. 21 2 10.00 0.00 1.50 0.00 6.50 2.00 ...........................................................................TGAAACCGTCCACAACTGCGG.............................. 21 2 9.50 0.00 0.50 0.00 9.00 0.00 ...........................................................................TGAAACCGTCCAATACTGAGGC............................. 22 2 9.50 0.00 1.00 0.00 8.50 0.00 ...........................................................................TGAAACCGACCAAAACTGAGG.............................. 21 2 9.50 0.00 0.00 0.50 8.00 1.00 ...........................................................................TGAAACCGTCCAAAACTAAGG.............................. 21 2 9.50 0.00 1.00 1.00 6.00 1.50 ............................................................................GAAACCGTCCAAAACTGAGG.............................. 20 2 9.50 0.00 0.50 0.50 2.50 6.00 ...........................................................................TGAAACCGTCCAACACTGCGG.............................. 21 2 9.50 0.00 1.50 0.00 8.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGAAGC............................. 22 2 9.50 0.00 2.00 0.00 1.00 6.50
27	chr3L:22971971-22972096 -	95.29	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA TCATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGTGAGCAACTATCCAAA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...........................................................................TGAAACCGTCCAAAACTGAGGC............................. 22 2 48270.00 20.50 1668.50 453.00 5230.50 40897.50 ...........................................................................TGAAACCGTCCAAAACTGAGG.............................. 21 2 10963.00 1.00 1305.50 567.00 4168.00 4921.50 ...........................................................................TGAAACCGTCCAAAACTGAGGCT............................ 23 2 2376.50 0.00 29.00 6.00 108.50 2233.00 ...........................................................................TGAAACCGTCCAAAACTGAGAC............................. 22 2 1084.50 0.00 1.50 1.00 6.50 1075.50 ...........................................................................TGAAACCGTCCAAAACTGAG............................... 20 2 909.50 0.00 62.00 30.00 225.50 592.00 ...........................................................................TGAAACCGTCCAAAACTGA................................ 19 2 588.50 0.00 8.00 0.00 18.50 562.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCC............................ 23 2 490.00 0.00 5.50 0.50 10.50 473.50 ...........................................................................TGAAACCGTCCAAAACTGAGGCA............................ 23 2 293.00 0.00 39.00 7.50 130.00 116.50 ...........................................................................TGAAACCGTCCAAAACTGAGGCTT........................... 24 2 267.00 0.00 3.00 0.00 10.00 254.00 ...........................................................................TGAAACCGTCCAAAACTG................................. 18 2 191.50 0.00 0.00 0.00 0.00 191.50 ...........................................................................TGAAACCGTCCAAAACTGCGGC............................. 22 2 156.50 0.00 4.00 0.00 58.50 94.00 ...........................................................................TGAAACCGTCCAAACCTGAGGC............................. 22 2 118.50 0.00 6.00 1.00 110.00 1.50 ...........................................................................TGAAACCGTCCCAAACTGAGGC............................. 22 2 114.50 0.00 19.50 0.00 47.00 48.00 ...........................................................................TGAAACCGTCCAACACTGAGGC............................. 22 2 105.00 0.50 12.50 0.50 90.50 1.00 ...........................................................................TGAAACCGTCCAAACCTGAGG.............................. 21 2 102.00 0.00 4.50 1.50 96.00 0.00 ............................................................................GAAACCGTCCAAAACTGAGGC............................. 21 2 98.50 0.00 2.50 0.00 1.50 94.50 ...........................................................................TGAAACCGTCCACAACTGAGGC............................. 22 2 97.50 0.00 11.00 1.00 84.50 1.00 ...........................................................................TGAAACCGTCCAAAACTGCGG.............................. 21 2 97.00 0.00 4.00 1.00 81.50 10.50 ...........................................................................TGAAACCGTCCAAAACTGG................................ 19 2 94.00 0.00 0.00 0.00 0.00 94.00 ...........................................................................TGAAGCCGTCCAAAACTGAGGC............................. 22 2 90.00 0.00 4.00 0.00 11.50 74.50 ...........................................................................TGAAACCGTCCAACACTGAGG.............................. 21 2 88.50 0.00 6.00 0.00 82.50 0.00 ...........................................................................TGAAACCGCCCAAAACTGAGGC............................. 22 2 83.00 0.00 1.00 0.00 16.50 65.50 ...........................................................................TGAAACCGTCCAAAGCTGAGGC............................. 22 2 72.50 0.00 4.50 0.00 16.50 51.50 ...........................................................................TGAAACCGTCCCAAACTGAGG.............................. 21 2 71.50 0.00 19.00 0.00 45.00 7.50 ...........................................................................TGAAACCGTCCACAACTGAGG.............................. 21 2 69.50 0.00 7.50 1.50 60.50 0.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCG............................ 23 2 66.50 0.00 2.50 0.00 4.00 60.00 ...........................................................................TGAAACCGTCCAAAACTGAGGT............................. 22 2 66.50 0.00 8.50 2.50 27.00 28.50 ...........................................................................TGAAACCGTCCAAAACTGAGGG............................. 22 2 62.00 0.00 1.50 0.00 1.00 59.50 ...........................................................................TGAAACCGTCCAAAACTGGGGC............................. 22 2 60.00 0.00 1.00 0.00 9.00 50.00 ...........................................................................TGAAACCGTCCAAAACTGAGGA............................. 22 2 57.50 0.00 7.50 0.50 27.00 22.50 ...........................................................................TGAAACCGTCCAAGACTGAGGC............................. 22 2 55.00 0.50 3.00 0.00 11.50 40.00 ...........................................................................TGAAACCGGCCAAAACTGAGGC............................. 22 2 51.00 0.00 4.50 0.00 37.00 9.50 ...........................................................................TGAAACCGTCCATAACTGAGG.............................. 21 2 50.00 0.00 7.00 0.00 42.50 0.50 ...........................................................................TGAAACCGTCCAAAACTGAGTC............................. 22 2 45.00 0.00 6.00 1.00 34.00 4.00 ...........................................................................TGAAACCGTCCATAACTGAGGC............................. 22 2 43.50 0.00 6.00 0.00 36.50 1.00 .............................................................................AAACCGTCCAAAACTGAGGC............................. 20 2 41.00 0.00 0.50 0.00 0.50 40.00 ...........................................................................TTAAACCGTCCAAAACTGAGGC............................. 22 2 38.50 0.00 0.00 0.00 3.00 35.50 ...........................................................................TCAAACCGTCCAAAACTGAGGC............................. 22 2 38.50 0.00 0.00 0.50 3.00 35.00 ...........................................................................CGAAACCGTCCAAAACTGAGGC............................. 22 2 37.50 0.00 3.50 1.50 10.50 22.00 ...........................................................................TGAAACCGTCCAAAACTGAGCC............................. 22 2 31.50 0.00 1.00 3.00 17.00 10.50 ...........................................................................TAAAACCGTCCAAAACTGAGGC............................. 22 2 31.50 0.00 1.00 0.50 5.50 24.50 ...........................................................................TGAAACCATCCAAAACTGAGGC............................. 22 2 31.00 0.00 1.50 0.00 3.50 26.00 ...........................................................................TGAAACCGGCCAAAACTGAGG.............................. 21 2 31.00 0.00 3.00 0.00 26.00 2.00 ...........................................................................TGAAACCGTCCAAAACTCAGGC............................. 22 2 30.00 0.00 1.50 1.00 15.50 12.00 ...........................................................................TGAAACCGTCCAAAACTAAGGC............................. 22 2 29.50 0.00 1.00 1.00 10.00 17.50 ...........................................................................TGAAACCGTCCAAAACTGATGC............................. 22 2 27.00 0.00 4.00 0.00 19.00 4.00 ...........................................................................TGAAACCGTCCAAAGCTGAGG.............................. 21 2 26.00 0.00 2.50 1.00 16.50 6.00 ...........................................................................TGGAACCGTCCAAAACTGAGGC............................. 22 2 25.50 0.00 1.00 0.00 9.00 15.50 ...........................................................................TGAAACCGTCCAAAACTGAC............................... 20 2 25.50 0.00 0.50 0.00 0.00 25.00 ...........................................................................TGAAACCGTCCGAAACTGAGGC............................. 22 2 25.00 0.00 1.50 0.00 18.50 5.00 ...........................................................................TGAAACAGTCCAAAACTGAGGC............................. 22 2 25.00 0.00 0.50 0.00 6.50 18.00 ...........................................................................TGAAACCGTCCAAAACTCAGG.............................. 21 2 24.00 0.00 1.50 3.50 19.00 0.00 ...........................................................................TGAAACCGTCTAAAACTGAGGC............................. 22 2 23.50 0.00 11.50 0.00 4.50 7.50 ...........................................................................TGAAACCGTCCAAAACTGACG.............................. 21 2 23.50 0.00 6.00 0.50 12.00 5.00 ...........................................................................TGAAACCGTCCAAGACTGAGG.............................. 21 2 23.00 0.00 2.50 1.00 5.00 14.50 ...........................................................................TGAGACCGTCCAAAACTGAGGC............................. 22 2 23.00 0.00 2.50 0.00 11.50 9.00 ..........................................................................CTGAAACCGTCCAAAACTGAGGC............................. 23 2 22.50 0.00 2.00 1.50 11.00 8.00 ...........................................................................TGAAACCGTCCAAAACTGAGT.............................. 21 2 22.00 0.00 1.50 0.00 18.50 2.00 ...........................................................................TGAAACCGTCCAAAACTGATG.............................. 21 2 21.00 0.00 4.50 1.00 12.50 3.00 ...........................................................................TGAAACCGCCCAAAACTGAGG.............................. 21 2 20.50 0.00 2.00 1.50 9.50 7.50 ...........................................................................TGAAACCGTCCAGAACTGAGGC............................. 22 2 20.50 0.00 2.00 1.00 10.50 7.00 ...........................................................................TGAAACCGTCCAAAACTTAGGC............................. 22 2 19.50 0.00 0.00 2.00 4.00 13.50 ...........................................................................TGAAACCGTCCAAAACTGACGC............................. 22 2 19.50 0.00 2.50 0.00 11.00 6.00 ...........................................................................TGGAACCGTCCAAAACTGAGG.............................. 21 2 19.00 0.00 2.50 0.00 14.00 2.50 ...........................................................................TGAAACCGTCCAAAACCGAGGC............................. 22 2 19.00 0.00 2.00 1.00 8.00 8.00 ...........................................................................TGAAACCGTCCAAAAATGAGGC............................. 22 2 18.50 0.00 3.00 0.50 12.00 3.00 ...........................................................................TGAAACCGTCCAAAACTGTGG.............................. 21 2 18.50 0.00 0.00 0.00 9.00 9.50 ...........................................................................TGAAACCGTCCAAAACTGAGC.............................. 21 2 18.00 0.00 0.50 0.00 11.00 6.50 ...........................................................................TGAAACCGTCCAAAACTGAGA.............................. 21 2 17.00 0.00 2.50 0.50 9.50 4.50 ...........................................................................TGAAACCGTCCGAAACTGAGG.............................. 21 2 17.00 0.00 3.50 0.00 11.50 2.00 ...........................................................................TGAAGCCGTCCAAAACTGAGG.............................. 21 2 16.50 0.00 1.50 0.50 7.00 7.50 ...........................................................................TGAAACTGTCCAAAACTGAGGC............................. 22 2 16.00 0.00 1.50 0.00 5.00 9.50 ...........................................................................TGAAACCGTCCAAAACGGAGGC............................. 22 2 15.00 0.00 1.00 0.00 13.00 1.00 ...........................................................................TGAAACAGTCCAAAACTGAGG.............................. 21 2 15.00 0.00 2.00 0.00 9.50 3.50 ...........................................................................TGAAACCGTCCAAAACCGAGG.............................. 21 2 15.00 0.00 3.00 1.00 10.00 1.00 ...........................................................................TGAAACCGTCAAAAACTGAGGC............................. 22 2 14.00 0.00 0.00 0.00 8.00 6.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCCT........................... 24 2 14.00 0.00 0.00 0.00 1.50 12.50 ...........................................................................CGAAACCGTCCAAAACTGAGG.............................. 21 2 13.50 0.00 1.50 0.50 10.00 1.50 ...........................................................................TGAAACCGTCCxAAACTGAGGC............................. 21 2 13.50 0.00 1.00 0.50 2.00 10.00 ...........................................................................TGAAACCGTCCAAAACTGTGGC............................. 22 2 13.00 0.00 1.50 0.00 7.00 4.50 ...........................................................................TGAAACCGTCTAAAACTGAGG.............................. 21 2 13.00 0.00 10.00 0.50 2.00 0.50 ...........................................................................TGAAACCGTACAAAACTGAGGC............................. 22 2 12.50 0.00 1.50 0.00 6.50 4.50 ...........................................................................TGAAACCGTTCAAAACTGAGGC............................. 22 2 12.50 0.00 1.50 0.50 5.00 5.50 ...........................................................................TGAAACCGTCCAAAACTGGGG.............................. 21 2 12.50 0.00 0.00 0.00 7.00 5.50 ...........................................................................TAAAACCGTCCAAAACTGAGG.............................. 21 2 11.50 0.00 2.00 1.00 4.00 4.50 ...........................................................................TGAAATCGTCCAAAACTGAGGC............................. 22 2 11.50 0.00 0.50 0.50 2.00 8.50 ...........................................................................TGAAACCGTCCAGAACTGAGG.............................. 21 2 11.50 0.00 0.50 0.00 10.00 1.00 ..............................................................................AACCGTCCAAAACTGAGGC............................. 19 2 11.00 0.00 0.00 0.00 0.00 11.00 ...........................................................................TGAAACCATCCAAAACTGAGG.............................. 21 2 11.00 0.00 3.00 0.00 6.00 2.00 ...........................................................................TGAAACCTTCCAAAACTGAGG.............................. 21 2 11.00 0.00 0.00 0.00 4.00 7.00 .............................CTTAGTTTTCGACGTGTTTTGGT.......................................................................... 23 2 10.50 1.00 3.50 0.50 3.50 2.00 ..........................................................................CTGAAACCGTCCAAAACTGAGG.............................. 22 2 10.00 0.00 1.50 0.00 6.00 2.50 ...........................................................................TGACACCGTCCAAAACTGAGGC............................. 22 2 10.00 0.00 2.00 0.00 7.50 0.50 ...........................................................................TGAGACCGTCCAAAACTGAGG.............................. 21 2 10.00 0.00 1.50 0.00 6.50 2.00 ...........................................................................TGAAACCGTCCACAACTGCGG.............................. 21 2 9.50 0.00 0.50 0.00 9.00 0.00 ...........................................................................TGAAACCGTCCAATACTGAGGC............................. 22 2 9.50 0.00 1.00 0.00 8.50 0.00 ...........................................................................TGAAACCGACCAAAACTGAGG.............................. 21 2 9.50 0.00 0.00 0.50 8.00 1.00 ...........................................................................TGAAACCGTCCAAAACTAAGG.............................. 21 2 9.50 0.00 1.00 1.00 6.00 1.50 ............................................................................GAAACCGTCCAAAACTGAGG.............................. 20 2 9.50 0.00 0.50 0.50 2.50 6.00 ...........................................................................TGAAACCGTCCAACACTGCGG.............................. 21 2 9.50 0.00 1.50 0.00 8.00 0.00 ...........................................................................TGAAACCGTCCAAAACTGAAGC............................. 22 2 9.50 0.00 2.00 0.00 1.00 6.50
13	chrU:2036162-2036201 +	18.55	TTATATCCGTAGTGTT--GTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA ATTTATCCGTGGGCTTGGGTCCATTACGGATTTCGCGTTT---------------------------------------------------------------------------------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..................GTACATTACGGAxTTCGCGT.......................................................................................... 19 1 1.00 1.00 0.00 0.00 0.00 0.00 ATTTATTCGTGGGATTGGGT............................................................................................................ 20 1 1.00 0.00 0.00 1.00 0.00 0.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
42	scaffold_4784:22180738-22180863 -	96.07	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA CCATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGTGAGCATCTATCCAAA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ...........................................................................TGAAACCGTCCAAAACTGAGGC............................. 22 1 55581.00 97.00 6010.00 0.00 49474.00 ...........................................................................TGAAACCGTCCAAAACTGAGG.............................. 21 1 52965.00 7.00 5443.00 0.00 47515.00 ...........................................................................TGAAACCGTCCAAAACTGAG............................... 20 1 1710.00 0.00 188.00 0.00 1522.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCA............................ 23 1 895.00 0.00 170.00 0.00 725.00 ...........................................................................TGAAACCGTCCAAAACTGAGGA............................. 22 1 632.00 0.00 39.00 0.00 593.00 ...........................................................................TGAAACCGTCCAAAACTTAGG.............................. 21 1 528.00 0.00 7.00 0.00 521.00 ...........................................................................TGAAACCGTCCAAAACTTAGGC............................. 22 1 517.00 0.00 9.00 0.00 508.00 ...........................................................................TGAAACCGTCAAAAACTGAGG.............................. 21 1 467.00 0.00 4.00 0.00 463.00 ...........................................................................TGAAACCGTCCAAAACTGATGC............................. 22 1 462.00 1.00 10.00 0.00 451.00 ...........................................................................TGAAACCGTCAAAAACTGAGGC............................. 22 1 461.00 0.00 6.00 0.00 455.00 ...........................................................................TGAAACCGTCCAAAACTGATG.............................. 21 1 415.00 0.00 11.00 0.00 404.00 ...........................................................................TGAAACCGTACAAAACTGAGGC............................. 22 1 378.00 0.00 4.00 0.00 374.00 ...........................................................................TTAAACCGTCCAAAACTGAGG.............................. 21 1 358.00 0.00 6.00 0.00 352.00 ...........................................................................TGAAACAGTCCAAAACTGAGGC............................. 22 1 354.00 0.00 5.00 0.00 349.00 ...........................................................................TGAAACCGTACAAAACTGAGG.............................. 21 1 350.00 0.00 5.00 0.00 345.00 ...........................................................................TTAAACCGTCCAAAACTGAGGC............................. 22 1 348.00 1.00 1.00 0.00 346.00 ...........................................................................TGAAACAGTCCAAAACTGAGG.............................. 21 1 333.00 0.00 4.00 0.00 329.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCT............................ 23 1 328.00 0.00 44.00 0.00 284.00 ...........................................................................TGAAACCGTCCAAAACTGAGTC............................. 22 1 297.00 1.00 22.00 0.00 274.00 ...........................................................................TGAAACCTTCCAAAACTGAGG.............................. 21 1 230.00 0.00 2.00 0.00 228.00 ...........................................................................TGAAACCTTCCAAAACTGAGGC............................. 22 1 226.00 0.00 1.00 0.00 225.00 ...........................................................................TGAAACCGTCCAAAACTGAGT.............................. 21 1 195.00 0.00 12.00 0.00 183.00 .............................CTTAGTTTTCGACGTGTTTTGGT.......................................................................... 23 1 178.00 3.00 10.00 0.00 165.00 ...........................................................................TGAAAACGTCCAAAACTGAGG.............................. 21 1 147.00 0.00 4.00 0.00 143.00 ...........................................................................TGAAACCGTCCAAAACTGA................................ 19 1 131.00 0.00 8.00 0.00 123.00 ...........................................................................TGAAAACGTCCAAAACTGAGGC............................. 22 1 130.00 0.00 3.00 0.00 127.00 ...........................................................................TGAAACCGTCCAAAGCTGAGGC............................. 22 1 128.00 0.00 16.00 0.00 112.00 ...........................................................................TGAAACCGTCCAAACCTGAGG.............................. 21 1 127.00 0.00 84.00 0.00 43.00 ............................................................................GAAACCGTCCAAAACTGAGGC............................. 21 1 122.00 0.00 8.00 0.00 114.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCC............................ 23 1 120.00 0.00 13.00 0.00 107.00 ...........................................................................TGAAACCGTCCAACACTGAGGC............................. 22 1 116.00 0.00 66.00 0.00 50.00 ...........................................................................TGAAACCGTCCAAAAATGAGG.............................. 21 1 116.00 0.00 5.00 0.00 111.00 ...........................................................................TGAAACCGTCCAAACCTGAGGC............................. 22 1 113.00 0.00 59.00 0.00 54.00 ...........................................................................TGAAACCGTCCAAAAATGAGGC............................. 22 1 111.00 1.00 6.00 0.00 104.00 ...........................................................................TGAAACCGTCCAAAACTGAGGT............................. 22 1 107.00 0.00 24.00 0.00 83.00 ..........................................................................CTGAAACCGTCCAAAACTGAGGC............................. 23 1 100.00 0.00 6.00 0.00 94.00 ...........................................................................TGAAGCCGTCCAAAACTGAGGC............................. 22 1 97.00 0.00 8.00 0.00 89.00 ...........................................................................TGAAACCGTCCAAAGCTGAGG.............................. 21 1 97.00 0.00 11.00 0.00 86.00 ...........................................................................TGAAACCGTCCAAAACTGCGG.............................. 21 1 91.00 0.00 48.00 0.00 43.00 ...........................................................................TGAAACTGTCCAAAACTGAGGC............................. 22 1 90.00 1.00 4.00 0.00 85.00 ............................................................................GAAACCGTCCAAAACTGAGG.............................. 20 1 89.00 0.00 7.00 0.00 82.00 ...........................................................................TGAGACCGTCCAAAACTGAGGC............................. 22 1 88.00 0.00 7.00 0.00 81.00 ...........................................................................TGAAGCCGTCCAAAACTGAGG.............................. 21 1 87.00 0.00 3.00 0.00 84.00 ...........................................................................TGAAACCGTCTAAAACTGAGGC............................. 22 1 87.00 0.00 42.00 0.00 45.00 ..........................................................................CTGAAACCGTCCAAAACTGAGG.............................. 22 1 86.00 0.00 5.00 0.00 81.00 ...........................................................................TGGAACCGTCCAAAACTGAGG.............................. 21 1 85.00 0.00 12.00 0.00 73.00 ...........................................................................TAAAACCGTCCAAAACTGAGG.............................. 21 1 83.00 0.00 4.00 0.00 79.00 ...........................................................................TAAAACCGTCCAAAACTGAGGC............................. 22 1 83.00 0.00 5.00 0.00 78.00 ...........................................................................TGAAACCGTCCAACACTGAGG.............................. 21 1 82.00 0.00 42.00 0.00 40.00 ...........................................................................TGGAACCGTCCAAAACTGAGGC............................. 22 1 82.00 0.00 7.00 0.00 75.00 ...........................................................................TGAAACCGTCCAAAACTCAGG.............................. 21 1 79.00 0.00 10.00 0.00 69.00 ...........................................................................TGAAACCGCCCAAAACTGAGG.............................. 21 1 75.00 0.00 4.00 0.00 71.00 ...........................................................................TGAAACCGCCCAAAACTGAGGC............................. 22 1 75.00 0.00 8.00 0.00 67.00 ...........................................................................TGAAACCGTCTAAAACTGAGG.............................. 21 1 74.00 0.00 32.00 0.00 42.00 ...........................................................................CGAAACCGTCCAAAACTGAGG.............................. 21 1 73.00 0.00 7.00 0.00 66.00 ...........................................................................TGAAACCGTCCAAAACCGAGG.............................. 21 1 73.00 0.00 11.00 0.00 62.00 ...........................................................................TGAAACCGTCCACAACTGAGG.............................. 21 1 72.00 0.00 54.00 0.00 18.00 ...........................................................................TGAAACCGTCCAAAACTCAGGC............................. 22 1 71.00 2.00 15.00 0.00 54.00 ...........................................................................TGAAACCGTCCxAAACTGAGG.............................. 20 1 70.00 0.00 6.00 0.00 64.00 ...........................................................................TGAAACCATCCAAAACTGAGG.............................. 21 1 68.00 0.00 7.00 0.00 61.00 ...........................................................................CGAAACCGTCCAAAACTGAGGC............................. 22 1 68.00 0.00 7.00 0.00 61.00 ...........................................................................TGAGACCGTCCAAAACTGAGG.............................. 21 1 68.00 0.00 6.00 0.00 62.00 ...........................................................................TGAAACCGTCCAAAACTGCGGC............................. 22 1 66.00 0.00 32.00 0.00 34.00 ...........................................................................TGAAACCGTCCAAAACTGAGCC............................. 22 1 66.00 1.00 12.00 0.00 53.00 ...........................................................................TGAAACCGTCCAAGACTGAGGC............................. 22 1 65.00 0.00 14.00 0.00 51.00 ...........................................................................TGAAACCGTCCAAAACTGAGA.............................. 21 1 65.00 0.00 10.00 0.00 55.00 ...........................................................................TGAAACCGTCCAAAACCGAGGC............................. 22 1 64.00 0.00 11.00 0.00 53.00 ...........................................................................TGAAACCGTCCACAACTGAGGC............................. 22 1 64.00 0.00 43.00 0.00 21.00 ...........................................................................TGAAACTGTCCAAAACTGAGG.............................. 21 1 63.00 0.00 7.00 0.00 56.00 ...........................................................................TGAAACCGTCCAAAACTAAGG.............................. 21 1 62.00 0.00 9.00 0.00 53.00 ...........................................................................TGCAACCGTCCAAAACTGAGG.............................. 21 1 60.00 0.00 2.00 0.00 58.00 ...........................................................................TGAAACCGTCCAAAACTAAGGC............................. 22 1 60.00 2.00 9.00 0.00 49.00 ...........................................................................TGAAACCGTTCAAAACTGAGG.............................. 21 1 58.00 0.00 3.00 0.00 55.00 ...........................................................................TGAAACCGTCCAAAACTGGGG.............................. 21 1 56.00 0.00 9.00 0.00 47.00 ...........................................................................TGAAACCATCCAAAACTGAGGC............................. 22 1 55.00 0.00 7.00 0.00 48.00 ...........................................................................TGAAACCGTCCAAGACTGAGG.............................. 21 1 54.00 0.00 7.00 0.00 47.00 ...........................................................................TGCAACCGTCCAAAACTGAGGC............................. 22 1 54.00 0.00 2.00 0.00 52.00 ...........................................................................TGAAACCGTCCxAAACTGAGGC............................. 21 1 53.00 0.00 1.00 0.00 52.00 ...........................................................................TGAAACCGTCCCAAACTGAGGC............................. 22 1 51.00 0.00 32.00 0.00 19.00 ...........................................................................TGAAACCGTCCAAAACTGAGC.............................. 21 1 50.00 0.00 6.00 0.00 44.00 ...........................................................................TGAAACCGTCCCAAACTGAGG.............................. 21 1 48.00 0.00 20.00 0.00 28.00 ...........................................................................TGAAACCGTCCAAAACTGAGGCG............................ 23 1 47.00 0.00 5.00 0.00 42.00 ...........................................................................TGAAACCGTCCGAAACTGAGG.............................. 21 1 47.00 0.00 14.00 0.00 33.00 ...........................................................................TGAAACCGTCCGAAACTGAGGC............................. 22 1 42.00 0.00 13.00 0.00 29.00 ...........................................................................TGAAACCGTCCAAAACTGACG.............................. 21 1 42.00 0.00 9.00 0.00 33.00 ...........................................................................TGAAACCGTCCAAAACTGAGAC............................. 22 1 42.00 0.00 6.00 0.00 36.00 ...........................................................................TGAAACCGTCCAAAACTGACGC............................. 22 1 41.00 0.00 8.00 0.00 33.00 ...........................................................................TGAAACCGTCCAAAACTGGGGC............................. 22 1 40.00 0.00 4.00 0.00 36.00 ...........................................................................TGAAACCGTCCAGAACTGAGG.............................. 21 1 40.00 0.00 9.00 0.00 31.00 ...........................................................................TGAAACCGTCCAAAACTGAAG.............................. 21 1 39.00 0.00 14.00 0.00 25.00 ...........................................................................TGAAACCGTTCAAAACTGAGGC............................. 22 1 38.00 0.00 2.00 0.00 36.00 ...........................................................................TGAAACCGTCCxxAACTGAGGC............................. 20 1 34.00 0.00 0.00 0.00 34.00 ...........................................................................TCAAACCGTCCAAAACTGAGGC............................. 22 1 34.00 0.00 4.00 0.00 30.00 ...........................................................................TGAAACCGTCCATAACTGAGGC............................. 22 1 34.00 0.00 27.00 0.00 7.00 ...........................................................................TGAAACCGTCCATAACTGAGG.............................. 21 1 33.00 0.00 21.00 0.00 12.00 ...........................................................................TGAAACCGTCCAGAACTGAGGC............................. 22 1 33.00 0.00 6.00 0.00 27.00 ...........................................................................TGAAACCGTCCAAAACTGAAGC............................. 22 1 33.00 1.00 7.00 0.00 25.00 ...........................................................................TGAACCCGTCCAAAACTGAGGC............................. 22 1 31.00 0.00 4.00 0.00 27.00 ...........................................................................TGAAACCCTCCAAAACTGAGG.............................. 21 1 31.00 0.00 1.00 0.00 30.00 ...........................................................................TGAAACCCTCCAAAACTGAGGC............................. 22 1 30.00 0.00 0.00 0.00 30.00 ...........................................................................TGTAACCGTCCAAAACTGAGGC............................. 22 1 29.00 0.00 2.00 0.00 27.00

droFic1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000453830:518566-518689 +	84.13	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA TCAAAGTAG-AGTGTGGCCCGCAATGAACCTTAGTTTTAGACGTGTTTTGGTGTG-TGGGGAGCGATATTCCGATTGAAACCGTCCAAAACTGAGGCTAACTGTGAGGCGTGAGCGTCTAACCAAA Size Hit Count Total Norm
2	scf7180000454050:604757-604866 +	38.02	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA TTTTTTTCAGTGTCTTTCCTACTTTCCAGCGTTCTCTTTGATGATTT--------------ATTTTTGGTTCAAGTGAAGCAG--CTGGCTTCAAGTTTACCGCCCAGCCCCATCATATTTTTCAC Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
6	scf7180000409801:98857-98979 -	89.75	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA CTG-ATGTGGAGTGTTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGAGAGCATCTGACCA-- Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
33	scf7180000302377:742013-742139 +	84.57	TTATATCCGTAG--TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA TCCCA-GCGTAGAATGATGTCCACAATGAACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTGAATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGCGGCGTGAGCATCTAACCAAA Size Hit Count Total Norm

droTak1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
265	scf7180000415491:455692-455815 -	91.27	TTATATCCGTAG--TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA CTA-AT--GTAGCGTGTTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGTGAGCATCTAACCAA- Size Hit Count Total Norm
95	scf7180000415278:75575-75643 +	23.39	TT--------------ATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA ATTGTTTTTAATTTACATATTTATTGTATCAGCCAAAGATTACCCTTACTTTTGGTAGATTTTCTTGTG----------------------------------------------------------------------- Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
6	scf7180000491199:234612-234734 +	90.53	TT-ATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA TTTATAT--AGAGTGTTGCCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGTGAGCATCTAAC--AA Size Hit Count Total Norm

droRho1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
140	scf7180000779133:19458-19582 +	90.54	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA TTTAAATAG-AGTGTTGCCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGTGAGCATCCAACCAAA Size Hit Count Total Norm
321	scf7180000779312:188861-188930 -	28.99	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCC--AACTGTGAGGCGCGA-GCATCTATCCA---AA GG----------------------------------------------------------GGATTGCATTCG----GGATTCATTCCGAACTGGAACTGGAACTGCCAATCGCAATACAGCGCTCCCATCGA Size Hit Count Total Norm
21	scf7180000764001:364-375 +	7.26	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA ------------------------------------------------------------------------------------------------------------------CATATACCCAGA Size Hit Count Total Norm	None	None
162	scf7180000779914:100597-100605 +	4.03	TTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAA CTTTT---------------------------------------------------------------------------------------------------------------------CGAT Size Hit Count Total Norm	None	None

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302808:850777-850909 -	78.62	TTATATCCGT----AGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCC--------AAA T-----CCATACAGAGTGATGTCCACAATGAACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGTGAGCGTCTACCAAACCAAGTAAA Size Hit Count Total Norm

droAna3 - 1 hit found