dme-mir-87- 12- and 20-way alignments

dme-mir-87	chr2L:9950418-9950516 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 9950433-9950456
   star strand at position 9950483-9950504
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chr2L:9950403-9950531 -	CCAAAGTC-CTTT--GGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCC-ATTATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCG----GAGAATTT
droSim1	chr2L:9739846-9739974 -	CTTAAGTC-CTTT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCC-ATCATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCG----GAGGATTT
droSec1	super_3:5397127-5397255 -	ACCAAGTC-CTTT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCC-ATCATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCG----GAGGATTT
droYak2	chr2L:12640967-12641095 -	TCCAAGTC-CTTT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACA-ATTATGGTCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCG----GAGGATTT
droEre2	scaffold_4929:10570531-10570659 -	CACGAGTC-CTTT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTGCC-ATTATGGCCTACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCG----GACGATTT
droAna3	scaffold_12916:13789760-13789888 -	AGTGAATC-CTTTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACC-GATATGGCACAGA-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCA----AAAGAT--
dp4	chr4_group3:220105-220229 +	TCCTA-CC-GTGT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTAGCC-ATAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCA----CT----CC
droPer1	super_1:1694906-1695025 +	TCCTA-CC-GTGT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTAGCC-ATAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC-------------
droWil1	scaffold_180708:12250842-12250963 -	AATTA-ACATTTG--GCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCAATTGTGATCTTCATTTCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTGACGGTAACATC-------------
droVir3	scaffold_12723:3996236-3996344 +	TGCTATCC-CTTG--GCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACA-ATTGAGACATCTAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT-------------------------
droMoj3	scaffold_6500:14729857-14729982 -	AGCTA-TC-CTTA--GCCGGCATCTTTCATTCGCGCCTGTATCTTGCTGAACCGTTACA-ATTGTCACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTCTCATCA----AAGCA---
droGri2	scaffold_15252:3661299-3661428 -	TGTTA-TC-CTTG--ACCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACC-ATTGTGACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGCTTCATCACTTGGTGGA---

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chr2L:9950403-9950531 -	NA	CCAA-AGTCCT-----------T-TGG-CAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCA-TTATGGCCAACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATC--------------------------------GGAGAATTT
droSim1	chr2L:9739846-9739974 -	1	CTTA-AGTCCT-----------T-TGG-CGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCA-TCATGGCCAACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATC--------------------------------GGAGGATTT
droSec1	super_3:5397127-5397255 -	1	ACCA-AGTCCT-----------T-TGG-CGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCA-TCATGGCCAACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATC--------------------------------GGAGGATTT
droYak2	chr2L:12640967-12641095 -	1	TCCA-AGTCCT-----------T-TGG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAA-TTATGGTCTTCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATC--------------------------------GGAGGATTT
droEre2	scaffold_4929:10570531-10570659 -	2	CACG-AGTCCT-----------T-TGG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCA-TTATGGCCTACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATC--------------------------------GGACGATTT
droEug1	scf7180000409554:4961907-4962035 +	2	TTTA-AGTCCT-----------T-TAG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TATTGGCCCAAGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATC--------------------------------GAAGGATTT
droBia1	scf7180000301468:52263-52391 -	2	CCAA-AAATCC-----------T-AGG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCA-CTTTGGCCTACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCTTTCATC--------------------------------GAGGGATGA
droTak1	scf7180000415667:562565-562692 +	1	TTAC-TTAAAT-----------T-AAG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-CTTTGGCCTTCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAACCATC--------------------------------GAGGGAT-T
droEle1	scf7180000491186:3003977-3004106 -	2	AG----CTCCT-----------T-TGG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTTACCA-TATTGGCCTTCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCAA------------------------------AAAAGTGT
droRho1	scf7180000779234:243647-243807 +	1	TAC--AGTCCT-----------T-TGG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TATTGGCCATCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCACGAAAGTGTTCTGGAAACGATATGGTACAAGGAGATCTT
droFic1	scf7180000449513:87-213 +	1	CAAA-ACTCCT-----------T-TGG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCAATATTGGCCTACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCAAC--------------------------------TGTAAA---
droKik1	scf7180000302677:173647-173776 +	1	TTAT-AATCCT-----------TCGGG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TTTGGGCCTACAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC--------------------------------AATGGGTTT
droAna3	scaffold_12916:13789760-13789886 -	1	TG---AATCCTTT---------C-AAG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCG-ATATGGCACAGAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC--------------------------------AAAAGAT--
droBip1	scf7180000396535:753813-753942 -	1	TGAAGAATCCTTT---------C-AAG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-ATGTGGCACACAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCATC--------------------------------AAATGAT--
dp4	chr4_group3:220105-220226 +	1	TCCT-A--CCG-----------TGTGC-TGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCA-TAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC--------------------------------AC-------
droPer1	super_1:1694906-1695025 +	1	TCCT-A--CCG-----------TGTGC-TGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCA-TAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC-----------------------------------------
droWil1	scaffold_180708:12250833-12250971 -	2	CCAA---TCAA--AATTAACATT-TGGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAATTGTGATCTTCATTTCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTGACGGTAACATC--------------------------------GTTGGAATA
droVir3	scaffold_12723:3996238-3996344 +	1	CT----ATCCC-----------T-TGGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAA-TTGAGACATCTAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT-----------------------------------------------------
droMoj3	scaffold_6500:14729857-14729979 -	3	------ATCCT-----------T-AGC-CGGCATCTTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAA-TTGTCACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTCTCATC--------------------------------AAAGCA---
droGri2	scaffold_15252:3661296-3661426 -	2	TT----ATCCT-----------T-GAC-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TTGTGACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGCTTCATCACTT----------------------------GGTGGATAG

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

CCAAAGTC-CTTT--GGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCC-ATTATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCG----GAGAATTT

Size

Hit Count

Total Norm

droSim1

CTTAAGTC-CTTT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCC-ATCATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCG----GAGGATTT	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
................................................................................TTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	6683.00	5937.00	155.00	20.00	571.00
..............................TCGCGCCTGTATCTTGCTGAACC.....................................................................................	23	1	1924.00	13.00	347.00	37.00	1527.00
................................................................................TTGAGCAAAATTTCAGGTGTGTG...................................	23	1	1922.00	1222.00	289.00	17.00	394.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGA..................................	23	1	1237.00	931.00	95.00	10.00	201.00
..............................TCGCGCCTGTATCTTGCTGAAC......................................................................................	22	1	632.00	8.00	307.00	47.00	270.00
................................................................................TTGAGCAAAATTTCAGGTGTGT....................................	22	1	391.00	76.00	268.00	30.00	17.00
.................................................................................TGAGCAAAATTTCAGGTGTGTG...................................	22	1	309.00	92.00	146.00	8.00	63.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGG..................................	24	1	229.00	12.00	43.00	5.00	169.00
................................................................................TTGAGCAAAATTTCAGGTGTG.....................................	21	1	152.00	17.00	78.00	18.00	39.00
................................................................................TTGAGCAAAATTTCAGGTG.......................................	19	1	116.00	0.00	77.00	17.00	22.00
...............................CGCGCCTGTATCTTGCTGAACC.....................................................................................	22	1	107.00	0.00	11.00	0.00	96.00
..............................TCGCGCCTGTATCTTGCTGA........................................................................................	20	1	99.00	0.00	83.00	9.00	7.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGT..................................	24	1	82.00	51.00	20.00	3.00	8.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGG..................................	23	1	79.00	1.00	8.00	3.00	67.00
................................................................................TTGAGCAAAATTTCAGGTGTGC....................................	22	1	61.00	0.00	54.00	6.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGTG.....................................	20	1	47.00	0.00	25.00	2.00	20.00
.................................................................................TGAGCAAAATTTCAGGTGTGT....................................	21	1	46.00	1.00	37.00	8.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGG....................................	22	1	41.00	0.00	32.00	6.00	3.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGA..................................	24	1	37.00	36.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGC..................................	24	1	33.00	23.00	5.00	0.00	5.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.................................	25	1	26.00	6.00	10.00	1.00	9.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGT..................................	23	1	25.00	5.00	17.00	2.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAA.................................	24	1	23.00	6.00	12.00	0.00	5.00
..............................TCGCGCCTGTATCTTGCTGAA.......................................................................................	21	1	22.00	0.00	17.00	0.00	5.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAT.................................	24	1	21.00	2.00	12.00	3.00	4.00
................................................................................TTGAGCAAAATTTCCGGTGTGTGA..................................	24	1	19.00	19.00	0.00	0.00	0.00
..............................TCGCGCCTGTATCTTGCTGG........................................................................................	20	1	18.00	0.00	16.00	1.00	1.00
................................GCGCCTGTATCTTGCTGAACC.....................................................................................	21	1	17.00	0.00	1.00	2.00	14.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTA..................................	24	1	17.00	17.00	0.00	0.00	0.00
................................................................................TTGAGCAAACTTTCAGGTGTGTGA..................................	24	1	16.00	16.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	15.00	14.00	0.00	0.00	1.00
................................................................................TGGAGCAAAATTTCAGGTGTGTGA..................................	24	1	14.00	14.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTGA..................................	24	1	14.00	14.00	0.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTG.......................................	18	1	14.00	0.00	6.00	1.00	7.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.................................	25	1	13.00	10.00	1.00	0.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGTGCGA..................................	24	1	13.00	11.00	0.00	0.00	2.00
..............................TCTCGCCTGTATCTTGCTGAACC.....................................................................................	23	1	12.00	0.00	2.00	0.00	10.00
................................................................................TTGGGCAAAATTTCAGGTGTGTGA..................................	24	1	11.00	10.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATTTCTGGTGTGTGA..................................	24	1	11.00	11.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTAAGGTGTGTGA..................................	24	1	10.00	10.00	0.00	0.00	0.00
................................................................................TTAAGCAAAATTTCAGGTGTGTGA..................................	24	1	10.00	10.00	0.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGG....................................	21	1	10.00	0.00	8.00	1.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTT...................................	23	1	9.00	4.00	4.00	1.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGC....................................	21	1	9.00	0.00	8.00	1.00	0.00
..............................TCTCGCCTGTATCTTGCTGAAC......................................................................................	22	1	8.00	0.00	7.00	0.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGC..................................	23	1	8.00	4.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGAGTGTGA..................................	24	1	8.00	8.00	0.00	0.00	0.00
................................................................................TTGAGCACAATTTCAGGTGTGTGA..................................	24	1	8.00	8.00	0.00	0.00	0.00
................................................................................TTGAGCAGAATTTCAGGTGTGTGA..................................	24	1	8.00	8.00	0.00	0.00	0.00
..............................TCGCTCCTGTATCTTGCTGAACC.....................................................................................	23	1	7.00	0.00	1.00	0.00	6.00
..............................TCGCGCCTGCATCTTGCTGAACC.....................................................................................	23	1	7.00	0.00	0.00	0.00	7.00
................................................................................CTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	7.00	7.00	0.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGCGTGTGA..................................	23	1	7.00	7.00	0.00	0.00	0.00
....................................................CGCTGCC-ATCATGGCCAACG-ATCCGGT.........................................................	27	1	7.00	0.00	2.00	1.00	4.00
................................................................................TTGAGAAAAATTTCAGGTGTGTGA..................................	24	1	7.00	7.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGGGTGA..................................	24	1	7.00	6.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATTTTAGGTGTGTGA..................................	24	1	7.00	6.00	0.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGTTGTGTGA..................................	24	1	7.00	5.00	0.00	0.00	2.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAGT................................	25	1	6.00	1.00	0.00	0.00	5.00
................................................................................TTGAGCAACATTTCAGGTGTGTGA..................................	24	1	6.00	6.00	0.00	0.00	0.00
.................................................................................TGAGAAAAATTTCAGGTGTGTGA..................................	23	1	6.00	6.00	0.00	0.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGTG...................................	23	1	6.00	6.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCGGGTGTGTGA..................................	24	1	6.00	6.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.................................	25	1	6.00	0.00	4.00	0.00	2.00
................................................................................TTGAGCAAGATTTCAGGTGTGTGA..................................	24	1	6.00	6.00	0.00	0.00	0.00
................................................................................ATGAGCAAAATTTCAGGTGTGTGA..................................	24	1	6.00	6.00	0.00	0.00	0.00
..............................TCGCGCCTGGATCTTGCTGAACC.....................................................................................	23	1	6.00	0.00	1.00	0.00	5.00
.................................................................................TGAGCAAAATTTCAGGGGTGTGA..................................	23	1	6.00	4.00	2.00	0.00	0.00
..................................................................................GAGCAAAATTTCAGGTGTGTGA..................................	22	1	6.00	6.00	0.00	0.00	0.00
................................................................................TTGAACAAAATTTCAGGTGTGTGA..................................	24	1	6.00	6.00	0.00	0.00	0.00
..............................TCGCGCCTGTATCTTGCTGAACA.....................................................................................	23	1	6.00	0.00	3.00	1.00	2.00
..............................TCGCGCCTGTATCTTGCTGAAA......................................................................................	22	1	6.00	0.00	5.00	1.00	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGTGA..................................	24	1	5.00	5.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGTG...................................	23	1	5.00	5.00	0.00	0.00	0.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGTGA..................................	25	1	5.00	5.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGTG...................................	23	1	5.00	2.00	0.00	0.00	3.00
.....................................................GCTGCC-ATCATGGCCAACG-ATCCGG..........................................................	25	1	5.00	2.00	0.00	0.00	3.00
..............................TCGCGCCCGTATCTTGCTGAACC.....................................................................................	23	1	5.00	0.00	1.00	0.00	4.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAAT................................	25	1	5.00	0.00	2.00	0.00	3.00
..............................TCGCGCCTGTATCTTGCTGAACT.....................................................................................	23	1	5.00	0.00	3.00	0.00	2.00
.................................................................................TGAGCAAAATTTCAGGTGTGTTA..................................	23	1	5.00	5.00	0.00	0.00	0.00
................................................................................GTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	5.00	5.00	0.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGCGTGA..................................	23	1	5.00	5.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTTTGTGA..................................	24	1	4.00	3.00	0.00	0.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAC.................................	24	1	4.00	1.00	0.00	0.00	3.00
.................................................................................TGAGCAAAATTTCATGTGTGTGA..................................	23	1	4.00	4.00	0.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAAA................................	25	1	4.00	0.00	3.00	0.00	1.00
..............................TCCCGCCTGTATCTTGCTGAAC......................................................................................	22	1	4.00	0.00	2.00	0.00	2.00
................................................................................TCGAGCAAAATTTCAGGTGTGTGA..................................	24	1	4.00	4.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGT....................................	22	1	4.00	0.00	3.00	0.00	1.00
................................................................................TTGAGCAAAATGTCAGGTGTGTGA..................................	24	1	4.00	4.00	0.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGTTGTGTGA..................................	23	1	4.00	0.00	1.00	0.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTGA....................................	22	1	4.00	0.00	2.00	0.00	2.00
..............................TCGCGCCTTTATCTTGCTGAACC.....................................................................................	23	1	4.00	0.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGGGT....................................	22	1	4.00	2.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTCCAGGTGTGTGA..................................	24	1	4.00	4.00	0.00	0.00	0.00
...............................TCCGCCTGTATCTTGCTGAACC.....................................................................................	22	1	3.00	0.00	0.00	0.00	3.00
................................................................................TTGAGTAAAATTTCAGGTGTGTG...................................	23	1	3.00	3.00	0.00	0.00	0.00
.................................................................................TTAGCAAAATTTCAGGTG.......................................	18	1	3.00	0.00	0.00	0.00	3.00
................................................................................TTGAGCAAAATTTCAGGTTTG.....................................	21	1	3.00	0.00	1.00	1.00	1.00
................................................................................TTGAGCAAAATTTTAGGTGTGTG...................................	23	1	3.00	3.00	0.00	0.00	0.00

droSec1

ACCAAGTC-CTTT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCC-ATCATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCG----GAGGATTT	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
................................................................................TTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	18964.00	4012.00	12194.00	2758.00
................................................................................TTGAGCAAAATTTCAGGTGTGTG...................................	23	1	6067.00	2222.00	2110.00	1735.00
................................................................................TTGAGCAAAATTTCAGGTGTGT....................................	22	1	5082.00	2886.00	258.00	1938.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGA..................................	23	1	3274.00	646.00	1921.00	707.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGT..................................	24	1	868.00	447.00	69.00	352.00
.................................................................................TGAGCAAAATTTCAGGTGTGTG...................................	22	1	802.00	304.00	174.00	324.00
................................................................................TTGAGCAAAATTTCAGGTGTG.....................................	21	1	706.00	352.00	41.00	313.00
.................................................................................TGAGCAAAATTTCAGGTGTGT....................................	21	1	239.00	113.00	7.00	119.00
..............................TCGCGCCTGTATCTTGCTGAACC.....................................................................................	23	1	184.00	2.00	182.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGT..................................	23	1	167.00	82.00	6.00	79.00
................................................................................TTGAGCAAAATTTCAGGTGT......................................	20	1	136.00	69.00	6.00	61.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.................................	25	1	123.00	33.00	72.00	18.00
................................................................................TTGAGCxxAATTTCAGGTGTGTGA..................................	22	1	106.00	5.00	97.00	4.00
................................................................................TTGAGCAAAATTTCAGGTGTGA....................................	22	1	103.00	27.00	57.00	19.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.................................	25	1	100.00	47.00	34.00	19.00
................................................................................TTGAGCxAAATTTCAGGTGTGTGA..................................	23	1	75.00	3.00	70.00	2.00
..............................TCGCGCCTGTATCTTGCTGAAC......................................................................................	22	1	74.00	6.00	60.00	8.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAA.................................	24	1	56.00	8.00	35.00	13.00
................................................................................TTGAGTAAAATTTCAGGTGTGTGA..................................	24	1	54.00	0.00	52.00	2.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGA..................................	24	1	49.00	15.00	34.00	0.00
................................................................................TTGAGCAAAATTTCAGGTCTGTGA..................................	24	1	47.00	31.00	13.00	3.00
................................................................................CTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	39.00	9.00	26.00	4.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAT.................................	24	1	37.00	7.00	20.00	10.00
................................................................................TTGAGCAAAAATTCAGGTGTGTGA..................................	24	1	37.00	2.00	34.00	1.00
................................................................................TTGAGCAAAATTTCAGGTATGTGA..................................	24	1	35.00	31.00	3.00	1.00
................................................................................TTGAGCAAAATTTCGGGTGTGTGA..................................	24	1	35.00	6.00	25.00	4.00
................................................................................TTGAGCAAAATTTTAGGTGTGTGA..................................	24	1	35.00	2.00	31.00	2.00
................................................................................TTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	33.00	12.00	13.00	8.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGG..................................	24	1	31.00	6.00	21.00	4.00
................................................................................TTGAGCAAAATTTCAGGTTTGTGA..................................	24	1	29.00	22.00	5.00	2.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGTGA..................................	25	1	28.00	0.00	21.00	7.00
................................................................................TTGAGCAAAATTTCAGGTGTGTT...................................	23	1	26.00	16.00	2.00	8.00
................................................................................TTGAGCxxAATTTCAGGTGTGTG...................................	21	1	26.00	2.00	20.00	4.00
................................................................................TTGAGCAAAATTTCAGGTCTGT....................................	22	1	26.00	24.00	0.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGTGCGA..................................	24	1	26.00	6.00	18.00	2.00
................................................................................TTGAGCAAAATTTCAGGTATGT....................................	22	1	24.00	23.00	0.00	1.00
................................................................................TTGAGCAAAATTTCCGGTGTGTGA..................................	24	1	23.00	6.00	15.00	2.00
.................................................................................TGAGCAAAATTTCAGGTGTG.....................................	20	1	21.00	5.00	2.00	14.00
................................................................................TTGAGCAAAATTTCAGGCGTGTG...................................	23	1	19.00	16.00	0.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGCGTGA..................................	24	1	19.00	2.00	9.00	8.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAG.................................	24	1	19.00	1.00	15.00	3.00
................................................................................TTGACCAAAATTTCAGGTGTGTGA..................................	24	1	19.00	2.00	17.00	0.00
................................................................................TTGAGCAAAACTTCAGGTGTGTGA..................................	24	1	18.00	4.00	12.00	2.00
................................................................................TTGAGCAAAATTTCGTGTGTGTGA..................................	24	1	18.00	2.00	16.00	0.00
................................................................................TTGAGCAGAATTTCAGGTGTGTGA..................................	24	1	18.00	2.00	15.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGC..................................	24	1	18.00	7.00	3.00	8.00
................................................................................TTGAGCAAAATTTCTGGTGTGTGA..................................	24	1	18.00	2.00	16.00	0.00
................................................................................TTGAGCAAAGTTTCAGGTGTGTGA..................................	24	1	17.00	0.00	15.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGCGT....................................	22	1	16.00	9.00	1.00	6.00
................................................................................TTGAGAAAAATTTCAGGTGTGTGA..................................	24	1	16.00	3.00	10.00	3.00
..................................................................................GAGCAAAATTTCAGGTGTGTGA..................................	22	1	16.00	5.00	8.00	3.00
................................................................................TTGAGCAAAATTTCAGGTxTGTGA..................................	23	2	8.00	0.50	7.50	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGTGA..................................	24	1	15.00	3.00	9.00	3.00
................................................................................TTGAGCAAAATTTCAGGTTTGTG...................................	23	1	15.00	7.00	2.00	6.00
................................................................................TTGAGCAAAATTTCAGGTCTGTG...................................	23	1	15.00	10.00	5.00	0.00
................................................................................TTGGGCAAAATTTCAGGTGTGTGA..................................	24	1	14.00	1.00	11.00	2.00
................................................................................TCGAGCAAAATTTCAGGTGTGTGA..................................	24	1	14.00	8.00	6.00	0.00
................................................................................TTGAGCAAAATTCCAGGTGTGTGA..................................	24	1	14.00	3.00	10.00	1.00
................................................................................TTGAGCAAACTTTCAGGTGTGTGA..................................	24	1	13.00	0.00	11.00	2.00
................................................................................TTGAGCAAAATTTCATGTGTGTGA..................................	24	1	13.00	2.00	9.00	2.00
................................................................................TTGAGCAAAATTTCAGGTATGTG...................................	23	1	13.00	12.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGT....................................	22	1	13.00	11.00	0.00	2.00
.................................................................................TGAGCAAAATTTCAGGTGTGA....................................	21	1	13.00	2.00	9.00	2.00
................................................................................TTGAGCAAAATCTCAGGTGTGTGA..................................	24	1	13.00	2.00	11.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTC...................................	23	1	12.00	3.00	4.00	5.00
................................................................................TTGAGCAAGATTTCAGGTGTGTGA..................................	24	1	12.00	1.00	8.00	3.00
................................................................................TTGAGCAAAATTTAAGGTGTGTGA..................................	24	1	12.00	3.00	7.00	2.00
................................................................................TTGAGCAAAATTTCAGGTTTGT....................................	22	1	12.00	11.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGC....................................	22	1	12.00	9.00	0.00	3.00
.................................................................................TGAGCxxAATTTCAGGTGTGTGA..................................	21	1	12.00	0.00	11.00	1.00
................................................................................TTGAGCAGAATTTCAGGTGTGTG...................................	23	1	12.00	4.00	6.00	2.00
................................................................................TTGAGCAAAAxTTCAGGTGTGTGA..................................	23	1	12.00	2.00	9.00	1.00
................................................................................TTGAGCAAAATTTCGGGTGTGTG...................................	23	1	12.00	2.00	8.00	2.00
................................................................................TTGAGCAAAATTTCAGTTGTGTGA..................................	24	1	12.00	2.00	8.00	2.00
................................................................................TTGAGAAAAATTTCAGGTGTGTG...................................	23	1	11.00	2.00	1.00	8.00
................................................................................TTCAGCAAAATTTCAGGTGTGTGA..................................	24	1	11.00	2.00	8.00	1.00
................................................................................TTGATCAAAATTTCAGGTGTGTGA..................................	24	1	11.00	1.00	8.00	2.00
................................................................................TTGAGCxAAATTTCAGGTGTGTG...................................	22	1	11.00	1.00	8.00	2.00
................................................................................TTTAGCAAAATTTCAGGTGTGTGA..................................	24	1	11.00	2.00	6.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.................................	25	1	11.00	1.00	9.00	1.00
................................................................................TTGAACAAAATTTCAGGTGTGTGA..................................	24	1	11.00	4.00	7.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTTTGA..................................	24	1	11.00	2.00	8.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAAA................................	25	1	10.00	2.00	6.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGTGTA...................................	23	1	10.00	4.00	4.00	2.00
.................................................................................TTAGCAAAATTTCAGGTGTGTGA..................................	23	1	10.00	0.00	8.00	2.00
................................................................................TTGAGCAAAATTTCACGTGTGTGA..................................	24	1	10.00	3.00	5.00	2.00
................................................................................TTGAGCAAAATTTCAxGTGTGTGA..................................	23	2	5.00	0.50	4.50	0.00
................................................................................TTGAGCAAAATTTCAGATGTGTGA..................................	24	1	10.00	4.00	6.00	0.00
................................................................................TTGAGCxxAATTTCAGGTGTGT....................................	20	1	10.00	5.00	1.00	4.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAAA................................	26	1	10.00	2.00	7.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTA..................................	24	1	10.00	3.00	5.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.................................	25	1	9.00	6.00	1.00	2.00
................................................................................TTGAGCAAAATTTCAGCTGTGTGA..................................	24	1	9.00	3.00	5.00	1.00
.................................................................................TGAGTAAAATTTCAGGTGTGTGA..................................	23	1	9.00	0.00	8.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTCTGA..................................	24	1	9.00	2.00	7.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGTG...................................	23	1	9.00	7.00	0.00	2.00
................................................................................TTGAGTAAAATTTCAGGTGTGTG...................................	23	1	8.00	1.00	6.00	1.00
................................................................................TTGAGCAAAATTTCAGTTGTGTG...................................	23	1	8.00	2.00	2.00	4.00
................................................................................TTGAGCAAAATTTCCGGTGTGT....................................	22	1	8.00	6.00	0.00	2.00

droYak2

TCCAAGTC-CTTT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACA-ATTATGGTCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCG----GAGGATTT	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
................................................................................TTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	6376.00	2419.00	159.00	3398.00	384.00	16.00
................................................................................TTGAGCAAAATTTCAGGTGTGTG...................................	23	1	1949.00	482.00	69.00	1254.00	134.00	10.00
................................................................................TTGAGCAAAATTTCAGGTGTGT....................................	22	1	996.00	16.00	58.00	767.00	150.00	5.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGA..................................	23	1	631.00	313.00	21.00	247.00	47.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGT..................................	24	1	357.00	6.00	8.00	297.00	45.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTG.....................................	21	1	150.00	13.00	5.00	109.00	17.00	6.00
.................................................................................TGAGCAAAATTTCAGGTGTGTG...................................	22	1	127.00	37.00	8.00	61.00	18.00	3.00
..............................TCGCGCCTGTATCTTGCTGAACC.....................................................................................	23	1	115.00	10.00	0.00	1.00	0.00	104.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.................................	25	1	66.00	1.00	4.00	47.00	12.00	2.00
..............................TCGCGCCTGTATCTTGCTGAAC......................................................................................	22	1	62.00	2.00	0.00	1.00	0.00	59.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.................................	25	1	45.00	6.00	2.00	31.00	6.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	37.00	5.00	0.00	28.00	3.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGT......................................	20	1	36.00	0.00	3.00	30.00	3.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGT....................................	21	1	34.00	1.00	4.00	23.00	5.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGT..................................	23	1	31.00	2.00	4.00	19.00	6.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTGA..................................	24	1	23.00	5.00	0.00	18.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGC..................................	24	1	17.00	7.00	0.00	3.00	7.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGA..................................	24	1	16.00	2.00	1.00	9.00	4.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTA..................................	24	1	15.00	2.00	2.00	2.00	9.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.................................	25	1	13.00	0.00	0.00	12.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTT...................................	23	1	12.00	1.00	3.00	6.00	2.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGCGA..................................	24	1	12.00	5.00	0.00	5.00	2.00	0.00
................................................................................TTGGGCAAAATTTCAGGTGTGTGA..................................	24	1	9.00	5.00	1.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGT....................................	22	1	9.00	0.00	1.00	7.00	1.00	0.00
................................................................................TTGAGCAAAATTTCCGGTGTGTGA..................................	24	1	9.00	5.00	0.00	3.00	1.00	0.00
................................................................................CTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	8.00	4.00	1.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTG...................................	23	1	8.00	3.00	0.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGG..................................	24	1	8.00	3.00	0.00	0.00	2.00	3.00
................................................................................TTGAGCAAAATTTTAGGTGTGTGA..................................	24	1	8.00	4.00	0.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTG.......................................	19	1	8.00	0.00	0.00	1.00	0.00	7.00
................................................................................TTGAGCAAAATTTAAGGTGTGTGA..................................	24	1	7.00	4.00	0.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGAGTGA..................................	24	1	7.00	1.00	0.00	6.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGTGA..................................	24	1	7.00	1.00	0.00	1.00	5.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTTTGA..................................	24	1	7.00	2.00	0.00	3.00	2.00	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGTGA..................................	24	1	6.00	2.00	0.00	3.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGTG...................................	23	1	6.00	6.00	0.00	0.00	0.00	0.00
................................................................................TTGAGCACAATTTCAGGTGTGTGA..................................	24	1	6.00	1.00	0.00	4.00	1.00	0.00
................................................................................TTGAGCAAAGTTTCAGGTGTGTGA..................................	24	1	6.00	3.00	0.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGTG...................................	23	1	6.00	0.00	1.00	4.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGATT................................	26	1	5.00	0.00	0.00	5.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAT.................................	24	1	5.00	0.00	1.00	3.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTTTG...................................	23	1	5.00	0.00	1.00	1.00	3.00	0.00
................................................................................TTGAGCAAAATTTCAGGTCTGTGA..................................	24	1	5.00	0.00	0.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTCGGGTGTGTGA..................................	24	1	5.00	1.00	0.00	4.00	0.00	0.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGTGA..................................	25	1	5.00	3.00	0.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGCTGTGTG...................................	23	1	5.00	0.00	0.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTCGTGTGTGTGA..................................	24	1	5.00	0.00	0.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTGT..................................	24	1	5.00	1.00	0.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTCCAGGTGTGTGA..................................	24	1	5.00	2.00	0.00	2.00	1.00	0.00
................................................................................TTGAACAAAATTTCAGGTGTGTGA..................................	24	1	5.00	3.00	0.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATCTCAGGTGTGTGA..................................	24	1	5.00	2.00	1.00	0.00	2.00	0.00
................................................................................TGGAGCAAAATTTCAGGTGTGTGA..................................	24	1	4.00	2.00	0.00	0.00	2.00	0.00
................................................................................TTGAGCAAAATTTCAGGTATGTGA..................................	24	1	4.00	2.00	0.00	1.00	1.00	0.00
................................................................................TTGAGCAAAGTTTCAGGTGTGTG...................................	23	1	4.00	1.00	0.00	1.00	2.00	0.00
................................................................................TTGAGTAAAATTTCAGGTGTGTGA..................................	24	1	4.00	2.00	0.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGAGTGTGA..................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
................................................................................TTGAGCAAGATTTCAGGTGTGTGA..................................	24	1	4.00	1.00	1.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGA....................................	22	1	4.00	0.00	0.00	2.00	2.00	0.00
................................................................................TTGAGCAAAATTTCAAGTGTGTGA..................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
................................................................................TTAAGCAAAATTTCAGGTGTGTGA..................................	24	1	4.00	0.00	1.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTATGA..................................	24	1	4.00	2.00	0.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGGGTG...................................	23	1	4.00	2.00	0.00	2.00	0.00	0.00
................................................................................TTGAGCxxAATTTCAGGTGTGTGA..................................	22	1	4.00	0.00	0.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAAA................................	26	1	4.00	0.00	0.00	3.00	1.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAA.................................	24	1	4.00	0.00	0.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTCCGGTGTGTG...................................	23	1	4.00	2.00	0.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCTGGTGTGTGA..................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
................................................................................TTGAGCAACATTTCAGGTGTGTGA..................................	24	1	3.00	1.00	0.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTTTGTGA..................................	24	1	3.00	0.00	0.00	3.00	0.00	0.00
.................................................................................TGAGAAAAATTTCAGGTGTGTGA..................................	23	1	3.00	2.00	1.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGT....................................	22	1	3.00	0.00	0.00	2.00	1.00	0.00
................................................................................TTGAGCAAACTTTCAGGTGTGTGA..................................	24	1	3.00	0.00	0.00	1.00	2.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTAA..................................	24	1	3.00	1.00	0.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGTG...................................	23	1	3.00	0.00	0.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGCG...................................	23	1	3.00	0.00	0.00	2.00	1.00	0.00
..............................TCTCGCCTGTATCTTGCTGAAC......................................................................................	22	1	3.00	0.00	0.00	0.00	0.00	3.00
................................................................................TCGAGCAAAATTTCAGGTGTGTGA..................................	24	1	3.00	1.00	0.00	1.00	1.00	0.00
................................................................................TTGAGCATAATTTCAGGTGTGTGA..................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGCTGTGTGA..................................	24	1	3.00	0.00	0.00	3.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTTTGA..................................	23	1	3.00	1.00	1.00	1.00	0.00	0.00
................................................................................TTGAGCAACATTTCAGGTGTGTG...................................	23	1	3.00	1.00	0.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTATGTG...................................	23	1	3.00	0.00	1.00	1.00	1.00	0.00
.................................................................................TGAGCAAAATTTCAGGTG.......................................	18	1	3.00	0.00	0.00	0.00	0.00	3.00
.................................................................................TGCGCAAAATTTCAGGTGTGTGA..................................	23	1	3.00	2.00	0.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGGGTGA..................................	24	1	3.00	0.00	0.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGC....................................	22	1	3.00	0.00	0.00	1.00	0.00	2.00
................................................................................TTTAGCAAAATTTCAGGTGTGTGA..................................	24	1	3.00	0.00	0.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGGGTGT..................................	24	1	3.00	0.00	0.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGATGTGT....................................	22	1	3.00	0.00	0.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.................................	25	1	3.00	1.00	0.00	2.00	0.00	0.00
................................................................................TTGAGCAAACTTTCAGGTGTGTG...................................	23	1	3.00	2.00	0.00	0.00	1.00	0.00
................................................................................TTGCGCAAAATTTCAGGTGTGTGA..................................	24	1	3.00	0.00	0.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGATGTGTG...................................	23	1	3.00	0.00	0.00	0.00	3.00	0.00

droEre2

CACGAGTC-CTTT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTGCC-ATTATGGCCTACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCG----GACGATTT	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
................................................................................TTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	15092.00	3094.00	346.00	2563.00	9089.00
................................................................................TTGAGCAAAATTTCAGGTGTGTG...................................	23	1	6235.00	694.00	187.00	749.00	4605.00
................................................................................TTGAGCAAAATTTCAGGTGTGT....................................	22	1	2552.00	54.00	133.00	137.00	2228.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGA..................................	23	1	2270.00	535.00	61.00	439.00	1235.00
................................................................................TTGAGCAAAATTTCAGGTGTG.....................................	21	1	818.00	25.00	42.00	29.00	722.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGT..................................	24	1	766.00	13.00	18.00	31.00	704.00
.................................................................................TGAGCAAAATTTCAGGTGTGTG...................................	22	1	603.00	60.00	28.00	57.00	458.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTA..................................	24	1	262.00	67.00	2.00	69.00	124.00
................................................................................TTGAGCAAAATTTCATGTGTGTGA..................................	24	1	140.00	25.00	1.00	16.00	98.00
................................................................................TTTAGCAAAATTTCAGGTGTGTGA..................................	24	1	122.00	7.00	0.00	13.00	102.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.................................	25	1	121.00	2.00	8.00	3.00	108.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGT..................................	23	1	96.00	7.00	2.00	2.00	85.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.................................	25	1	89.00	6.00	3.00	4.00	76.00
................................................................................TTGATCAAAATTTCAGGTGTGTGA..................................	24	1	85.00	6.00	0.00	7.00	72.00
................................................................................TTGAGCAAAATTTCAGGTGTGTT...................................	23	1	83.00	16.00	2.00	11.00	54.00
.................................................................................TGAGCAAAATTTCAGGTGTGT....................................	21	1	82.00	1.00	3.00	4.00	74.00
................................................................................TTGAGCAAAATTTCAGGTGTGTAA..................................	24	1	79.00	2.00	1.00	4.00	72.00
................................................................................TTGAGCAAAATTTCAGGTGTGTCA..................................	24	1	77.00	3.00	1.00	6.00	67.00
................................................................................TTGAGCAAAATTTCAGGTGT......................................	20	1	77.00	0.00	1.00	0.00	76.00
................................................................................TTGAGCAAAATTTCAGTTGTGTGA..................................	24	1	72.00	23.00	5.00	14.00	30.00
................................................................................TTGAGCAAAATTTCAGGTTTGTGA..................................	24	1	67.00	18.00	0.00	12.00	37.00
................................................................................TTGAGCAAAATTTCATGTGTGTG...................................	23	1	64.00	2.00	0.00	8.00	54.00
................................................................................TTGAGCAAAATTTCAGGTGTTTGA..................................	24	1	62.00	11.00	2.00	19.00	30.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGA..................................	24	1	58.00	17.00	1.00	13.00	27.00
................................................................................TTTAGCAAAATTTCAGGTGTGTG...................................	23	1	56.00	1.00	0.00	1.00	54.00
................................................................................TTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	54.00	13.00	1.00	13.00	27.00
................................................................................TTGATCAAAATTTCAGGTGTGTG...................................	23	1	45.00	3.00	0.00	2.00	40.00
................................................................................TTGAGAAAAATTTCAGGTGTGTGA..................................	24	1	42.00	2.00	0.00	1.00	39.00
................................................................................TTGAGCAAAATTTCAGGTGTGTC...................................	23	1	38.00	0.00	0.00	0.00	38.00
................................................................................TTGAGCAAAATTTAAGGTGTGTGA..................................	24	1	37.00	2.00	1.00	0.00	34.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAA.................................	24	1	37.00	3.00	3.00	3.00	28.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGC..................................	24	1	36.00	11.00	4.00	7.00	14.00
................................................................................TTGAGCAAAATTTCAGGTGTGTA...................................	23	1	34.00	1.00	1.00	2.00	30.00
................................................................................TTGAGCAAAATTTCAGTTGTGTG...................................	23	1	32.00	5.00	4.00	1.00	22.00
..............................TCGCGCCTGTATCTTGCTGAAC......................................................................................	22	1	32.00	5.00	1.00	1.00	25.00
................................................................................TTGAGCAAAATTTCAGGTGCGTGA..................................	24	1	31.00	7.00	1.00	9.00	14.00
..............................TCGCGCCTGTATCTTGCTGAACC.....................................................................................	23	1	31.00	8.00	1.00	1.00	21.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGG..................................	24	1	29.00	11.00	1.00	6.00	11.00
................................................................................TTGAGCAAAATTTCAGGGGTGTG...................................	23	1	29.00	5.00	1.00	3.00	20.00
................................................................................TTGAGCAAAATTTCAGGTGTTTG...................................	23	1	28.00	13.00	0.00	3.00	12.00
................................................................................TTGAGCAAAATTTCAGGTGTGCGA..................................	24	1	28.00	7.00	1.00	7.00	13.00
................................................................................TTGAGCAAAATTTCAGGTGTGA....................................	22	1	27.00	1.00	4.00	0.00	22.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAT.................................	24	1	25.00	2.00	0.00	5.00	18.00
................................................................................TTGAGCAAAATTTCGGGTGTGTGA..................................	24	1	25.00	6.00	0.00	5.00	14.00
................................................................................TTCAGCAAAATTTCAGGTGTGTGA..................................	24	1	25.00	10.00	0.00	2.00	13.00
................................................................................TTGAGCAAAATTTCATGTGTGT....................................	22	1	25.00	0.00	1.00	2.00	22.00
................................................................................CTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	24.00	9.00	0.00	6.00	9.00
................................................................................TTGAGCAAAATTTCAGGTTTGTG...................................	23	1	24.00	7.00	0.00	3.00	14.00
................................................................................TTGAGAAAAATTTCAGGTGTGTG...................................	23	1	23.00	1.00	0.00	0.00	22.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGTGA..................................	25	1	23.00	3.00	3.00	4.00	13.00
.................................................................................TGAGCAAAATTTCATGTGTGTGA..................................	23	1	22.00	6.00	0.00	1.00	15.00
................................................................................TTGAGCAAAATTTCCGGTGTGTGA..................................	24	1	22.00	7.00	1.00	6.00	8.00
.................................................................................TGAGCAAAATTTCAGGTGTGTTA..................................	23	1	22.00	8.00	0.00	6.00	8.00
................................................................................TTGAGCAAAATTTCAGGCGTGTG...................................	23	1	22.00	5.00	0.00	2.00	15.00
................................................................................TTTAGCAAAATTTCAGGTGTGT....................................	22	1	22.00	0.00	0.00	0.00	22.00
................................................................................TTGAGCAAAATTTCAGGAGTGTGA..................................	24	1	21.00	4.00	0.00	5.00	12.00
.................................................................................TGAGCAAAATTTCAGGTGTG.....................................	20	1	21.00	0.00	0.00	0.00	21.00
................................................................................TTGGGCAAAATTTCAGGTGTGTGA..................................	24	1	20.00	4.00	1.00	7.00	8.00
................................................................................TTGAGCAAAGTTTCAGGTGTGTGA..................................	24	1	20.00	5.00	0.00	7.00	8.00
................................................................................TTGAGCAAAATTTAAGGTGTGTG...................................	23	1	19.00	0.00	0.00	1.00	18.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGC..................................	23	1	18.00	3.00	0.00	1.00	14.00
................................................................................TTGAGCAAACTTTCAGGTGTGTGA..................................	24	1	18.00	6.00	0.00	7.00	5.00
................................................................................TTGAGCAAAATTTCAGGTGTCTGA..................................	24	1	18.00	9.00	0.00	4.00	5.00
................................................................................TTGAGCGAAATTTCAGGTGTGTGA..................................	24	1	17.00	5.00	0.00	6.00	6.00
................................................................................TTGAGCAGAATTTCAGGTGTGTGA..................................	24	1	17.00	1.00	0.00	4.00	12.00
................................................................................TTGAGCAAAATTTCAGGGGTGT....................................	22	1	16.00	0.00	0.00	1.00	15.00
................................................................................TTGAGCAAAATTCCAGGTGTGTGA..................................	24	1	16.00	3.00	0.00	2.00	11.00
................................................................................TTAAGCAAAATTTCAGGTGTGTGA..................................	24	1	16.00	3.00	0.00	2.00	11.00
................................................................................TTGAGCAAAACTTCAGGTGTGTGA..................................	24	1	15.00	4.00	1.00	3.00	7.00
................................................................................TTGAGCAAAATTTTAGGTGTGTGA..................................	24	1	15.00	1.00	0.00	3.00	11.00
................................................................................TTGACCAAAATTTCAGGTGTGTGA..................................	24	1	15.00	2.00	1.00	2.00	10.00
................................................................................TTGAGCAAAATTTCAGGTCTGTGA..................................	24	1	15.00	6.00	0.00	3.00	6.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.................................	25	1	15.00	0.00	0.00	0.00	15.00
................................................................................TCGAGCAAAATTTCAGGTGTGTGA..................................	24	1	14.00	5.00	0.00	2.00	7.00
.................................................................................TTAGCAAAATTTCAGGTGTGTGA..................................	23	1	14.00	1.00	0.00	1.00	12.00
................................................................................TTGAGCAAAATTTCAGCTGTGTGA..................................	24	1	13.00	7.00	0.00	4.00	2.00
................................................................................TTGAGCAAAATTTCACGTGTGTGA..................................	24	1	13.00	4.00	0.00	2.00	7.00
................................................................................TTGAGCxxAATTTCAGGTGTGTGA..................................	22	1	13.00	0.00	0.00	0.00	13.00
................................................................................TTGAGCAAAATTTCAGATGTGTGA..................................	24	1	13.00	5.00	0.00	5.00	3.00
................................................................................TTGAGCAAAATTTAAGGTGTGT....................................	22	1	12.00	0.00	0.00	0.00	12.00
................................................................................TTGAACAAAATTTCAGGTGTGTGA..................................	24	1	12.00	4.00	0.00	2.00	6.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGT....................................	23	1	12.00	0.00	1.00	1.00	10.00
................................................................................TTGCGCAAAATTTCAGGTGTGTGA..................................	24	1	12.00	5.00	0.00	1.00	6.00
................................................................................TTGAGCAAAATCTCAGGTGTGTGA..................................	24	1	12.00	2.00	0.00	2.00	8.00
................................................................................TTGAGCAAAATTTCAGGTGTCTG...................................	23	1	11.00	4.00	0.00	2.00	5.00
..................................................................................GAGCAAAATTTCAGGTGTGTGA..................................	22	1	11.00	2.00	0.00	3.00	6.00
................................................................................TTGAGAAAAATTTCAGGTGTGT....................................	22	1	11.00	1.00	1.00	0.00	9.00
................................................................................TTTAGCAAAATTTCAGGTGTGTGT..................................	24	1	11.00	0.00	0.00	0.00	11.00
..............................TCGCGCCTGTATCTTGCTGA........................................................................................	20	1	11.00	0.00	2.00	0.00	9.00
................................................................................TTGAGCAAAATTTCAGGTATGTGA..................................	24	1	10.00	3.00	0.00	1.00	6.00
.................................................................................TGAGCAAAATTTCAGGTTTGTGA..................................	23	1	10.00	2.00	0.00	1.00	7.00
................................................................................TTGAGCAACATTTCAGGTGTGTGA..................................	24	1	10.00	3.00	0.00	5.00	2.00
................................................................................TTGGGCAAAATTTCAGGTGTGTG...................................	23	1	10.00	1.00	0.00	1.00	8.00
................................................................................TTGATCAAAATTTCAGGTGTGT....................................	22	1	10.00	0.00	0.00	1.00	9.00
................................................................................TTGAGCAAAATTTCAAGTGTGTGA..................................	24	1	10.00	7.00	0.00	0.00	3.00
................................................................................TTGAGCAAAATTTCAGGAGTGTG...................................	23	1	10.00	0.00	0.00	3.00	7.00
................................................................................TTGAGCAAAATTTCATGTGTG.....................................	21	1	9.00	0.00	1.00	0.00	8.00
................................................................................TTGAGCAAGATTTCAGGTGTGTGA..................................	24	1	9.00	3.00	0.00	3.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTTTTA..................................	24	1	9.00	5.00	0.00	3.00	1.00
.................................................................................TGAGCAAAATTTAAGGTGTGTGA..................................	23	1	9.00	0.00	0.00	1.00	8.00
................................................................................TTGAGCAAAATTTCAGGTCTGTG...................................	23	1	9.00	2.00	0.00	6.00	1.00

droAna3

AGTGAATC-CTTTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACC-GATATGGCACAGA-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCA----AAAGAT--	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
................................................................................TTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	6084.00	2367.00	2992.00	321.00	404.00
................................................................................TTGAGCAAAATTTCAGGTGTGTG...................................	23	1	2860.00	1094.00	1496.00	123.00	147.00
................................................................................TTGAGCAAAATTTCAGGTGTGT....................................	22	1	2068.00	898.00	980.00	186.00	4.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGT..................................	24	1	615.00	252.00	331.00	27.00	5.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGA..................................	23	1	592.00	126.00	389.00	29.00	48.00
................................................................................TTGAGCAAAATTTCAGGTGTG.....................................	21	1	496.00	170.00	292.00	30.00	4.00
.................................................................................TGAGCAAAATTTCAGGTGTGTG...................................	22	1	260.00	56.00	178.00	12.00	14.00
................................................................................TTGAGCAAAATTTCAGGTGT......................................	20	1	119.00	39.00	68.00	9.00	3.00
.................................................................................TGAGCAAAATTTCAGGTGTGT....................................	21	1	114.00	34.00	71.00	9.00	0.00
................................................................................TTTAGCAAAATTTCAGGTGTGTGA..................................	24	1	76.00	9.00	66.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTATGA..................................	24	1	53.00	28.00	25.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGT..................................	23	1	52.00	14.00	32.00	6.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGTGA..................................	24	1	45.00	14.00	31.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTA..................................	24	1	43.00	7.00	15.00	0.00	21.00
................................................................................TTTAGCAAAATTTCAGGTGTGT....................................	22	1	35.00	5.00	30.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.................................	25	1	35.00	18.00	14.00	1.00	2.00
................................................................................TTGAGCAAAATTTCATGTGTGTGA..................................	24	1	33.00	8.00	18.00	0.00	7.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.................................	25	1	32.00	14.00	13.00	3.00	2.00
................................................................................TTTAGCAAAATTTCAGGTGTGTG...................................	23	1	31.00	4.00	26.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTT...................................	23	1	30.00	10.00	13.00	2.00	5.00
................................................................................TTGAGCAAAATTTCAGGTGTCTGA..................................	24	1	28.00	18.00	10.00	0.00	0.00
................................................................................TTGATCAAAATTTCAGGTGTGTGA..................................	24	1	24.00	8.00	14.00	1.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGTG.....................................	20	1	19.00	4.00	15.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTAT....................................	22	1	18.00	7.00	10.00	1.00	0.00
................................................................................TTGAGCAAAATTTCATGTGTGTG...................................	23	1	18.00	5.00	12.00	0.00	1.00
................................................................................TTGAGAAAAATTTCAGGTGTGTG...................................	23	1	18.00	6.00	12.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTATG...................................	23	1	17.00	8.00	8.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGC..................................	24	1	16.00	9.00	2.00	4.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGG..................................	24	1	16.00	7.00	6.00	0.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTTTGA..................................	24	1	16.00	4.00	8.00	0.00	4.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAA.................................	24	1	15.00	9.00	6.00	0.00	0.00
................................................................................TTGAGCxxAATTTCAGGTGTGTGA..................................	22	1	15.00	6.00	9.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTGA..................................	24	1	14.00	1.00	7.00	5.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.................................	25	1	14.00	7.00	6.00	1.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGT....................................	22	1	14.00	4.00	7.00	3.00	0.00
................................................................................TTGAGCAAAATCTCAGGTGTGTGA..................................	24	1	13.00	11.00	0.00	1.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTCT....................................	22	1	13.00	6.00	7.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAAGTGTGTGA..................................	24	1	13.00	10.00	1.00	0.00	2.00
................................................................................TTTAGCAAAATTTCAGGTGTGTGT..................................	24	1	13.00	1.00	12.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGA..................................	24	1	12.00	2.00	4.00	0.00	6.00
................................................................................TTGAGCAAAATTTCAGGTGTTTG...................................	23	1	12.00	2.00	7.00	0.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTGA....................................	22	1	12.00	4.00	8.00	0.00	0.00
................................................................................TTGATCAAAATTTCAGGTGTGTG...................................	23	1	12.00	4.00	8.00	0.00	0.00
................................................................................TTGAGCAAAATTTCACGTGTGTGA..................................	24	1	12.00	9.00	1.00	0.00	2.00
................................................................................TTGAGCAAAATTTCATGTGTGT....................................	22	1	11.00	4.00	7.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGTGA..................................	24	1	11.00	3.00	2.00	1.00	5.00
.................................................................................TTAGCAAAATTTCAGGTGTGTGA..................................	23	1	10.00	0.00	10.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGCGA..................................	24	1	10.00	3.00	6.00	0.00	1.00
................................................................................TTGAGCAAAATATCAGGTGTGTGA..................................	24	1	10.00	9.00	0.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	10.00	3.00	3.00	1.00	3.00
................................................................................GTGAGCAAAGTTTCAGGTGTGT....................................	22	1	10.00	0.00	0.00	10.00	0.00
................................................................................TTGAGCAAAATTCCAGGTGTGTGA..................................	24	1	10.00	4.00	6.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTTTGTGA..................................	24	1	9.00	2.00	6.00	1.00	0.00
................................................................................TTGAGCAAAATTTAAGGTGTGTGA..................................	24	1	9.00	4.00	4.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTATGT..................................	24	1	9.00	3.00	6.00	0.00	0.00
................................................................................TTGCGCAAAATTTCAGGTGTGTGA..................................	24	1	9.00	8.00	0.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTCTG...................................	23	1	8.00	5.00	3.00	0.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGTGT..................................	24	1	8.00	2.00	6.00	0.00	0.00
................................................................................TTGAGCAAAAATTCAGGTGTGTGA..................................	24	1	8.00	7.00	1.00	0.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTG.....................................	21	1	8.00	3.00	5.00	0.00	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGTGA..................................	24	1	8.00	5.00	3.00	0.00	0.00
................................................................................TGGAGCAAAATTTCAGGTGTGTGA..................................	24	1	8.00	4.00	0.00	4.00	0.00
................................................................................TTGAGCAAAATTACAGGTGTGTGA..................................	24	1	8.00	8.00	0.00	0.00	0.00
................................................................................TCGAGCAAAATTTCAGGTGTGTGA..................................	24	1	8.00	5.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGTG...................................	23	1	8.00	2.00	2.00	1.00	3.00
..............................TCGCGCCTGTATCTTGCTGAAC......................................................................................	22	1	7.00	1.00	2.00	4.00	0.00
................................................................................TTGAGCAAAATTTCCGGTGTGTGA..................................	24	1	7.00	1.00	3.00	1.00	2.00
................................................................................TTGAGCAAAATATCAGGTGTGT....................................	22	1	7.00	7.00	0.00	0.00	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGT....................................	22	1	6.00	4.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGT....................................	22	1	6.00	2.00	1.00	2.00	1.00
................................................................................TTGGGCAAAATTTCAGGTGTGTGA..................................	24	1	6.00	0.00	3.00	1.00	2.00
................................................................................TAGAGCAAAATTTCAGGTGTGTGA..................................	24	1	6.00	5.00	0.00	1.00	0.00
................................................................................TTGAGCAAAATTTCGGGTGTGTGA..................................	24	1	6.00	3.00	2.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGTTTGTG...................................	23	1	6.00	1.00	4.00	0.00	1.00
................................................................................CTGAGCAAAATTTCAGGTGTGT....................................	22	1	6.00	3.00	2.00	1.00	0.00
................................................................................TTTAGCAAAATTTCAGGTGTGTT...................................	23	1	6.00	1.00	5.00	0.00	0.00
................................................................................TGGAGCAAAATTTCAGGTGTGTG...................................	23	1	6.00	5.00	1.00	0.00	0.00
................................................................................TTCAGCAAAATTTCAGGTGTGTGA..................................	24	1	6.00	1.00	4.00	1.00	0.00
................................................................................TTGATCAAAATTTCAGGTGTGT....................................	22	1	6.00	4.00	2.00	0.00	0.00
................................................................................TTAAGCAAAATTTCAGGTGTGT....................................	22	1	6.00	3.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTG...................................	23	1	6.00	4.00	1.00	0.00	1.00
................................................................................TTGAGCAAAATTACAGGTGTGTG...................................	23	1	6.00	6.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTAAGGTGTGT....................................	22	1	6.00	0.00	5.00	1.00	0.00
................................................................................TTGAGCAAAACTTCAGGTGTGTG...................................	23	1	5.00	3.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTTTGT....................................	22	1	5.00	0.00	5.00	0.00	0.00
................................................................................TTTAGCAAAATTTCAGGTGTGTTA..................................	24	1	5.00	0.00	4.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGTCTGTGA..................................	24	1	5.00	0.00	2.00	3.00	0.00
................................................................................TTGAGCAACATTTCAGGTGTGTGA..................................	24	1	5.00	3.00	0.00	0.00	2.00
................................................................................TTGAGCAAAGTTTCAGGTGTGTGA..................................	24	1	5.00	3.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATATCAGGTGTGTG...................................	23	1	5.00	5.00	0.00	0.00	0.00
.................................................................................TTAGCAAAATTTCAGGTGTGTG...................................	22	1	5.00	1.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTAAGGTGTGTG...................................	23	1	5.00	0.00	4.00	0.00	1.00
................................................................................TTGAACAAAATTTCAGGTGTGTG...................................	23	1	5.00	2.00	2.00	1.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTT...................................	22	1	5.00	0.00	5.00	0.00	0.00
................................................................................TTTAGCAAAATTTCAGGTGTG.....................................	21	1	5.00	0.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTCGGGTGTGT....................................	22	1	5.00	1.00	4.00	0.00	0.00
................................................................................TCGAGCAAAATTTCAGGTGTGT....................................	22	1	5.00	1.00	1.00	3.00	0.00
................................................................................TTGAGCAAGATTTCAGGTGTGTG...................................	23	1	5.00	2.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTCCAGGTGTGTG...................................	23	1	5.00	3.00	1.00	0.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGT......................................	19	1	5.00	1.00	3.00	1.00	0.00
................................................................................TTGAGCAAAACTTCAGGTGTGTGA..................................	24	1	5.00	3.00	1.00	0.00	1.00

dp4

TCCTA-CC-GTGT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTAGCC-ATAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCA----CT----CC	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
................................................................................TTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	5928.00	2413.00	2998.00	517.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGT....................................	22	1	1866.00	1490.00	140.00	235.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTG...................................	23	1	1742.00	993.00	536.00	213.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGA..................................	23	1	1054.00	390.00	571.00	93.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTG.....................................	21	1	737.00	498.00	133.00	104.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGT..................................	24	1	200.00	148.00	30.00	22.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTG...................................	22	1	200.00	121.00	49.00	30.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGT......................................	20	1	148.00	127.00	10.00	11.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGT....................................	21	1	102.00	79.00	2.00	20.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGT..................................	23	1	40.00	34.00	2.00	4.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.................................	25	1	27.00	16.00	10.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTT...................................	23	1	23.00	21.00	1.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	20.00	4.00	16.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGA..................................	24	1	19.00	3.00	16.00	0.00	0.00
................................................................................TGGAGCAAAATTTCAGGTGTGTGA..................................	24	1	17.00	0.00	12.00	5.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTG.....................................	20	1	17.00	12.00	1.00	4.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGC..................................	24	1	17.00	3.00	11.00	3.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGG..................................	24	1	14.00	6.00	8.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAA.................................	24	1	14.00	7.00	4.00	3.00	0.00
................................................................................TTGAGCAAAATTTCAGGAGTGTGA..................................	24	1	13.00	1.00	12.00	0.00	0.00
................................................................................TTGAGCAAAGTTTCAGGTGTGTGA..................................	24	1	13.00	3.00	10.00	0.00	0.00
................................................................................TTGAGCAAACTTTCAGGTGTGTGA..................................	24	1	12.00	3.00	8.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTGA..................................	24	1	12.00	3.00	9.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.................................	25	1	12.00	8.00	3.00	1.00	0.00
..............................TCGCGCCTGTATCTTGCTGAAC......................................................................................	22	1	12.00	5.00	3.00	3.00	1.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGTGA..................................	25	1	11.00	4.00	7.00	0.00	0.00
................................................................................CTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	10.00	0.00	10.00	0.00	0.00
................................................................................TTGAGCAAAATTTCGGGTGTGTGA..................................	24	1	10.00	2.00	6.00	2.00	0.00
................................................................................TTGAGCAAGATTTCAGGTGTGTGA..................................	24	1	10.00	5.00	3.00	2.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGTGA..................................	24	1	10.00	1.00	9.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGA....................................	22	1	10.00	9.00	1.00	0.00	0.00
................................................................................TTGGGCAAAATTTCAGGTGTGTGA..................................	24	1	9.00	5.00	3.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTA..................................	24	1	9.00	0.00	7.00	2.00	0.00
................................................................................TTGAGCAAAATCTCAGGTGTGTGA..................................	24	1	9.00	2.00	6.00	1.00	0.00
.................................................................................TGAGAAAAATTTCAGGTGTGTGA..................................	23	1	8.00	0.00	7.00	1.00	0.00
................................................................................TTGAGCAAAATTTAAGGTGTGTGA..................................	24	1	8.00	2.00	5.00	1.00	0.00
..............................TCGCGCCTGTATCTTGCTGAACC.....................................................................................	23	1	8.00	0.00	7.00	1.00	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGTGA..................................	24	1	7.00	2.00	4.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGCTGTGTGA..................................	24	1	7.00	3.00	3.00	1.00	0.00
................................................................................TTGAGCxAAATTTCAGGTGTGTGA..................................	23	1	7.00	7.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCCGGTGTGTGA..................................	24	1	6.00	1.00	4.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTG...................................	23	1	6.00	3.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGCGA..................................	24	1	6.00	4.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGTG...................................	23	1	6.00	0.00	4.00	2.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGT....................................	22	1	6.00	4.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTCCAGGTGTGTGA..................................	24	1	6.00	2.00	4.00	0.00	0.00
................................................................................TTGCGCAAAATTTCAGGTGTGTGA..................................	24	1	6.00	1.00	4.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGTG...................................	23	1	5.00	2.00	2.00	1.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAT.................................	24	1	5.00	3.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTTCATGTGTGTGA..................................	24	1	5.00	2.00	3.00	0.00	0.00
................................................................................TTGAGCACAATTTCAGGTGTGTGA..................................	24	1	5.00	0.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGGGTGA..................................	24	1	5.00	0.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTTAGGTGTGTGA..................................	24	1	5.00	1.00	3.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTTTGA..................................	24	1	5.00	1.00	4.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAG.................................	24	1	5.00	0.00	4.00	1.00	0.00
................................................................................TTGAGCAAAATTTCTGGTGTGTGA..................................	24	1	5.00	0.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTCT....................................	22	1	4.00	4.00	0.00	0.00	0.00
................................................................................TTGAGCAACATTTCAGGTGTGTGA..................................	24	1	4.00	1.00	3.00	0.00	0.00
................................................................................TTCAGCAAAATTTCAGGTGTGTGA..................................	24	1	4.00	1.00	1.00	2.00	0.00
................................................................................TTGAGCAAAAGTTCAGGTGTGTGA..................................	24	1	4.00	0.00	4.00	0.00	0.00
................................................................................TTGAGCCAAATTTCAGGTGTGTGA..................................	24	1	4.00	1.00	3.00	0.00	0.00
................................................................................TTAAGCAAAATTTCAGGTGTGT....................................	22	1	4.00	1.00	1.00	2.00	0.00
................................................................................TTGAGCTAAATTTCAGGTGTGTGA..................................	24	1	4.00	0.00	4.00	0.00	0.00
................................................................................TTAAGCAAAATTTCAGGTGTGTGA..................................	24	1	4.00	0.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTATGA..................................	24	1	4.00	0.00	3.00	1.00	0.00
...............................................................................GTTGAGCAAAATTTCAGGTGTGTG...................................	24	1	4.00	1.00	3.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGGGTGTGA..................................	23	1	4.00	0.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTGAGGTGTGTGA..................................	24	1	4.00	2.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.................................	25	1	4.00	2.00	2.00	0.00	0.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGT....................................	23	1	4.00	2.00	0.00	2.00	0.00
................................................................................TTGAGCAGAATTTCAGGTGTGTGA..................................	24	1	4.00	0.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGTGA..................................	24	1	4.00	2.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGGGA..................................	24	1	4.00	2.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTAA..................................	24	1	3.00	1.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTTTG...................................	23	1	3.00	1.00	2.00	0.00	0.00
................................................................................TTGAGCxxAATTTCAGGTGTGTG...................................	21	1	3.00	3.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTA...................................	23	1	3.00	2.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGCG...................................	23	1	3.00	2.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.................................	25	1	3.00	3.00	0.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGCGTGTGA..................................	23	1	3.00	0.00	2.00	1.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGC..................................	23	1	3.00	1.00	0.00	2.00	0.00
................................................................................TCGAGCAAAATTTCAGGTGTGTGA..................................	24	1	3.00	1.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGT....................................	22	1	3.00	2.00	1.00	0.00	0.00
................................................................................TTGAGCAAGATTTCAGGTGTGTG...................................	23	1	3.00	0.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGCTGTGTG...................................	23	1	3.00	2.00	0.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGT....................................	22	1	3.00	3.00	0.00	0.00	0.00
................................................................................ATGAGCAAAATTTCAGGTGTGTGA..................................	24	1	3.00	1.00	2.00	0.00	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGTG...................................	23	1	3.00	0.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGGGTGG..................................	24	1	3.00	0.00	2.00	1.00	0.00
................................................................................TTGAGCAAACTTTCAGGCGTGTGA..................................	24	1	3.00	0.00	3.00	0.00	0.00
................................................................................TGGAGCAAAATTTCAGGTGTGTGT..................................	24	1	3.00	0.00	2.00	1.00	0.00
................................................................................TTGATCAAAATTTCAGGTGTGT....................................	22	1	3.00	2.00	0.00	1.00	0.00
.................................................................................TAAGCAAAATTTCAGGTGTGTGA..................................	23	1	3.00	1.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGATGTGTGA..................................	24	1	3.00	0.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATCTCAGGTGTGTG...................................	23	1	3.00	2.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTTTGTG...................................	23	1	3.00	1.00	2.00	0.00	0.00
..................................................................................GAGCAAAATTTCAGGTGTGTGA..................................	22	1	3.00	2.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATTTCGTGTGTGTGA..................................	24	1	3.00	3.00	0.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGT......................................	19	1	3.00	1.00	0.00	2.00	0.00
................................................................................GTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	3.00	0.00	2.00	1.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGCGTGA..................................	23	1	3.00	0.00	2.00	1.00	0.00

droPer1

TCCTA-CC-GTGT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTAGCC-ATAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC-------------	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
................................................................................TTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	3883.00	2131.00	566.00	360.00	808.00	18.00
................................................................................TTGAGCAAAATTTCAGGTGTGT....................................	22	1	2072.00	935.00	40.00	221.00	868.00	8.00
................................................................................TTGAGCAAAATTTCAGGTGTGTG...................................	23	1	1175.00	632.00	193.00	123.00	220.00	7.00
..............................TCGCGCCTGTATCTTGCTGAACC.....................................................................................	23	1	840.00	1.00	4.00	1.00	2.00	832.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGA..................................	23	1	685.00	294.00	130.00	53.00	202.00	6.00
................................................................................TTGAGCAAAATTTCAGGTGTG.....................................	21	1	506.00	217.00	50.00	68.00	167.00	4.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGT..................................	24	1	286.00	186.00	9.00	21.00	70.00	0.00
..............................TCGCGCCTGTATCTTGCTGAAC......................................................................................	22	1	189.00	0.00	0.00	1.00	3.00	185.00
.................................................................................TGAGCAAAATTTCAGGTGTGTG...................................	22	1	166.00	73.00	26.00	20.00	46.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGTGT....................................	21	1	107.00	43.00	1.00	11.00	52.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGT......................................	20	1	107.00	35.00	0.00	14.00	58.00	0.00
...............................CGCGCCTGTATCTTGCTGAACC.....................................................................................	22	1	76.00	0.00	1.00	0.00	0.00	75.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.................................	25	1	44.00	17.00	3.00	1.00	20.00	3.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGT..................................	23	1	39.00	25.00	2.00	5.00	7.00	0.00
..............................TCGCGCCTGTATCTTGCTGAACCG....................................................................................	24	1	25.00	0.00	0.00	0.00	0.00	25.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAA.................................	24	1	20.00	5.00	2.00	5.00	6.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.................................	25	1	15.00	8.00	0.00	2.00	4.00	1.00
................................................................................TTGAGCAAAATTTCAGGTG.......................................	19	1	13.00	0.00	0.00	1.00	4.00	8.00
................................................................................TGGAGCAAAATTTCAGGTGTGTGA..................................	24	1	12.00	0.00	2.00	0.00	10.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	12.00	6.00	2.00	3.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGT....................................	22	1	11.00	0.00	0.00	0.00	11.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTG.....................................	20	1	11.00	5.00	1.00	0.00	3.00	2.00
................................................................................TGGAGCAAAATTTCAGGTGTGT....................................	22	1	11.00	0.00	0.00	1.00	10.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGA....................................	22	1	10.00	5.00	0.00	1.00	4.00	0.00
..............................TCTCGCCTGTATCTTGCTGAACC.....................................................................................	23	1	10.00	0.00	0.00	0.00	0.00	10.00
................................................................................TTGAGCAAAATTTCAGTTGTGTGA..................................	24	1	10.00	1.00	0.00	1.00	8.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTT...................................	23	1	9.00	3.00	1.00	0.00	5.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGG..................................	24	1	9.00	1.00	0.00	0.00	1.00	7.00
................................................................................TTGAGCAAAATTTCAGGTGTGC....................................	22	1	9.00	4.00	0.00	1.00	4.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGA..................................	24	1	9.00	0.00	2.00	0.00	7.00	0.00
..............................TCGCGCCTGTATCTTGCTGAA.......................................................................................	21	1	9.00	0.00	0.00	1.00	0.00	8.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAT.................................	24	1	8.00	2.00	1.00	0.00	4.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGCGT....................................	22	1	8.00	2.00	0.00	2.00	4.00	0.00
................................................................................TTGAGCAAAGTTTCAGGTGTGTGA..................................	24	1	8.00	2.00	1.00	0.00	5.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGT....................................	22	1	8.00	1.00	0.00	2.00	5.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAG.................................	24	1	8.00	6.00	1.00	0.00	1.00	0.00
................................................................................TTGAGCAAGATTTCAGGTGTGTGA..................................	24	1	7.00	2.00	0.00	0.00	4.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGC..................................	24	1	7.00	1.00	0.00	1.00	5.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTGA..................................	24	1	6.00	2.00	1.00	1.00	2.00	0.00
................................................................................TTGAGCAAAATTTCAGCTGTGTGA..................................	24	1	6.00	0.00	0.00	1.00	5.00	0.00
................................................................................TTGAGCAAAATTTCAGGAGTGTGA..................................	24	1	6.00	4.00	1.00	0.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTG...................................	23	1	6.00	1.00	2.00	0.00	3.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGCGA..................................	24	1	6.00	3.00	0.00	1.00	1.00	1.00
................................................................................TTTAGCAAAATTTCAGGTGTGTGA..................................	24	1	6.00	5.00	1.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTA..................................	24	1	6.00	1.00	1.00	0.00	4.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGTG...................................	23	1	5.00	0.00	3.00	2.00	0.00	0.00
................................................................................CTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	5.00	3.00	0.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGTG...................................	23	1	5.00	2.00	0.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGCG...................................	23	1	5.00	1.00	1.00	1.00	2.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGT....................................	22	1	5.00	1.00	0.00	1.00	3.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGT....................................	22	1	5.00	0.00	0.00	1.00	4.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGTGA..................................	24	1	5.00	2.00	1.00	1.00	1.00	0.00
.................................................................................TGAGCAAAATTTCAGGGGTGTGA..................................	23	1	5.00	2.00	1.00	0.00	2.00	0.00
.................................CGCCTGTATCTTGCTGAACC.....................................................................................	20	1	5.00	0.00	0.00	0.00	0.00	5.00
................................................................................TTGAGCAAAATTTCAGGTGGGT....................................	22	1	5.00	1.00	0.00	0.00	4.00	0.00
................................................................................TTGAGCAAGATTTCAGGTGTGT....................................	22	1	5.00	3.00	0.00	0.00	2.00	0.00
................................................................................TTGAGCAGAATTTCAGGTGTGTGA..................................	24	1	5.00	1.00	2.00	1.00	1.00	0.00
.................................................................................TGAGAAAAATTTCAGGTGTGTGA..................................	23	1	4.00	0.00	0.00	0.00	4.00	0.00
..............................TCTCGCCTGTATCTTGCTGAAC......................................................................................	22	1	4.00	0.00	0.00	0.00	0.00	4.00
................................................................................TTGAGCAGAATTTCAGGTGTGT....................................	22	1	4.00	1.00	0.00	1.00	2.00	0.00
................................................................................TTGAGCAAAATGTCAGGTGTGTGA..................................	24	1	4.00	0.00	0.00	0.00	4.00	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGTG...................................	23	1	4.00	1.00	1.00	0.00	2.00	0.00
..............................TCGCGCCTGTATCTTGCTGA........................................................................................	20	1	4.00	0.00	0.00	0.00	1.00	3.00
................................................................................TTGAGCAAAATTTTAGGTGTGTGA..................................	24	1	4.00	2.00	1.00	0.00	1.00	0.00
................................................................................TTGAGCAAAATGTCAGGTGTGT....................................	22	1	4.00	0.00	0.00	0.00	4.00	0.00
................................................................................TTAAGCAAAATTTCAGGTGTGTGA..................................	24	1	4.00	0.00	1.00	1.00	2.00	0.00
................................................................................TTGAGCAGAATTTCAGGTGTGTG...................................	23	1	4.00	3.00	0.00	0.00	1.00	0.00
................................................................................TTGAGCAAAAxTTCAGGTGTGTGA..................................	23	1	4.00	4.00	0.00	0.00	0.00	0.00
..................................GCCTGTATCTTGCTGAACC.....................................................................................	19	1	4.00	0.00	0.00	0.00	0.00	4.00
................................................................................TTGAGCxxAATTTCAGGTGTGT....................................	20	1	4.00	4.00	0.00	0.00	0.00	0.00
................................................................................TTGAACAAAATTTCAGGTGTGTGA..................................	24	1	4.00	2.00	1.00	0.00	1.00	0.00
................................................................................TTGCGCAAAATTTCAGGTGTGTGA..................................	24	1	4.00	0.00	1.00	1.00	2.00	0.00
................................................................................TTGAGCAAAATTTCAGGAGTGT....................................	22	1	4.00	1.00	0.00	0.00	3.00	0.00
................................................................................TTGCGCAAAATTTCAGGTGTGTG...................................	23	1	4.00	0.00	1.00	0.00	3.00	0.00
..............................TCGCGCCTGTATGTTGCTGAACC.....................................................................................	23	1	3.00	0.00	0.00	0.00	0.00	3.00
................................................................................TTGAGGAAAATTTCAGGTGTGT....................................	22	1	3.00	1.00	0.00	1.00	1.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAAA................................	25	1	3.00	1.00	0.00	0.00	2.00	0.00
................................................................................TTGAGCAAAATTTCAGGTCTGTGA..................................	24	1	3.00	0.00	2.00	0.00	1.00	0.00
................................................................................TTGAGCAAAATCTCAGGTGTGT....................................	22	1	3.00	0.00	0.00	0.00	3.00	0.00
................................................................................TTGAGCAAAAGTTCAGGTGTGTGA..................................	24	1	3.00	0.00	0.00	0.00	3.00	0.00
................................................................................TTGAGCAAAATTTCATGTGTGT....................................	22	1	3.00	1.00	0.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTTCATGTGTG.....................................	21	1	3.00	1.00	0.00	1.00	1.00	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGT....................................	22	1	3.00	0.00	0.00	0.00	3.00	0.00
..............................TCGCGCCTGTATCTTGCTTAACC.....................................................................................	23	1	3.00	0.00	0.00	0.00	1.00	2.00
................................................................................TTGAGGAAAATTTCAGGTGTGTGA..................................	24	1	3.00	0.00	0.00	1.00	2.00	0.00
.................................................................................TGAGTAAAATTTCAGGTGTGTGA..................................	23	1	3.00	0.00	2.00	0.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGT........................................	18	1	3.00	0.00	0.00	2.00	1.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGG..................................	23	1	3.00	0.00	1.00	0.00	1.00	1.00
................................................................................TTGAGCAAAATTTCACGTGTGTGA..................................	24	1	3.00	0.00	0.00	0.00	3.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTG.....................................	21	1	3.00	0.00	0.00	0.00	3.00	0.00
..............................TCGCGCCTGTATATTGCTGAACC.....................................................................................	23	1	3.00	0.00	0.00	0.00	0.00	3.00
..............................TCGCGCCTGGATCTTGCTGAACC.....................................................................................	23	1	3.00	0.00	0.00	0.00	0.00	3.00
................................................................................TTGAGCAAAGTTTCAGGTGTGT....................................	22	1	3.00	0.00	0.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGATGTGTGA..................................	24	1	3.00	2.00	0.00	0.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGATGTGT....................................	22	1	3.00	1.00	0.00	0.00	2.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGTT.................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGT....................................	23	1	3.00	0.00	0.00	1.00	2.00	0.00
................................................................................GTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	3.00	1.00	0.00	0.00	2.00	0.00
................................................................................TTGAGCxxAATTTCAGGTGTGTGA..................................	22	1	3.00	3.00	0.00	0.00	0.00	0.00
................................................................................GTGAGCAAAATTTCAGGTGTGT....................................	22	1	3.00	0.00	0.00	1.00	2.00	0.00

droWil1

AATTA-ACATTTG--GCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCAATTGTGATCTTCATTTCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTGACGGTAACATC-------------	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
................................................................................TTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	63139.00	1525.00	56747.00	4828.00	39.00
................................................................................TTGAGCAAAATTTCAGGTGTGTG...................................	23	1	18547.00	930.00	9461.00	8088.00	68.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGA..................................	23	1	3495.00	78.00	3046.00	364.00	7.00
................................................................................TTGAGCAAAATTTCAGGTGTGT....................................	22	1	2047.00	575.00	597.00	841.00	34.00
.................................................................................TGAGCAAAATTTCAGGTGTGTG...................................	22	1	774.00	29.00	302.00	436.00	7.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGT..................................	24	1	650.00	96.00	228.00	324.00	2.00
..............................TCGCGCCTGTATCTTGCTGAACC.....................................................................................	23	1	642.00	0.00	264.00	6.00	372.00
................................................................................TTGAGCAAAATTTCAGGTGTG.....................................	21	1	597.00	41.00	103.00	433.00	20.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGA..................................	24	1	276.00	6.00	257.00	13.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.................................	25	1	268.00	4.00	244.00	20.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	166.00	7.00	141.00	18.00	0.00
..............................TCGCGCCTGTATCTTGCTGAAC......................................................................................	22	1	132.00	1.00	52.00	1.00	78.00
................................................................................TTGAGCAAAATTTCATGTGTGTGA..................................	24	1	129.00	2.00	122.00	5.00	0.00
................................................................................TTTAGCAAAATTTCAGGTGTGTGA..................................	24	1	121.00	1.00	113.00	7.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGTGA..................................	24	1	120.00	1.00	92.00	27.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTA..................................	24	1	109.00	0.00	102.00	7.00	0.00
................................................................................TTGATCAAAATTTCAGGTGTGTGA..................................	24	1	107.00	1.00	102.00	4.00	0.00
................................................................................TTGAGCAAAATTTAAGGTGTGTGA..................................	24	1	98.00	0.00	83.00	15.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTGA..................................	24	1	95.00	3.00	85.00	7.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGA....................................	22	1	91.00	3.00	78.00	9.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.................................	25	1	89.00	6.00	67.00	15.00	1.00
................................................................................TTGAGCxxAATTTCAGGTGTGTGA..................................	22	1	86.00	1.00	82.00	3.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGCGA..................................	24	1	79.00	0.00	64.00	15.00	0.00
................................................................................CTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	74.00	3.00	58.00	13.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGTG...................................	23	1	70.00	2.00	38.00	30.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGG..................................	24	1	69.00	1.00	55.00	6.00	7.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGTGA..................................	25	1	67.00	0.00	62.00	5.00	0.00
................................................................................TTGAGCAAAATTTCAGGTTTGTGA..................................	24	1	66.00	1.00	61.00	4.00	0.00
................................................................................TTGAGCAAAATTTCGGGTGTGTGA..................................	24	1	65.00	3.00	57.00	5.00	0.00
................................................................................TTGAGCAAAATTCCAGGTGTGTGA..................................	24	1	63.00	2.00	57.00	4.00	0.00
................................................................................TCGAGCAAAATTTCAGGTGTGTGA..................................	24	1	61.00	2.00	48.00	11.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGC..................................	24	1	60.00	0.00	19.00	39.00	2.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAA.................................	24	1	59.00	0.00	55.00	3.00	1.00
................................................................................TTGAGCAGAATTTCAGGTGTGTGA..................................	24	1	59.00	1.00	54.00	4.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGT......................................	20	1	58.00	11.00	16.00	31.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGT....................................	21	1	58.00	14.00	16.00	28.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGTGA..................................	24	1	54.00	2.00	47.00	4.00	1.00
................................................................................TTGAGCAAAATTTCGTGTGTGTGA..................................	24	1	54.00	2.00	47.00	5.00	0.00
................................................................................TTGAGCAAAATTTCAGGTCTGTGA..................................	24	1	51.00	2.00	42.00	7.00	0.00
................................................................................TTGAGCAAAGTTTCAGGTGTGTGA..................................	24	1	51.00	2.00	43.00	6.00	0.00
................................................................................TTGAGCAAAATTTCAGGAGTGTGA..................................	24	1	51.00	0.00	45.00	6.00	0.00
................................................................................TTGGGCAAAATTTCAGGTGTGTGA..................................	24	1	50.00	0.00	45.00	5.00	0.00
................................................................................TTGAGTAAAATTTCAGGTGTGTGA..................................	24	1	49.00	0.00	44.00	5.00	0.00
................................................................................TTGAGCxAAATTTCAGGTGTGTGA..................................	23	1	49.00	0.00	44.00	5.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTTTGA..................................	24	1	49.00	1.00	48.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTA...................................	23	1	49.00	3.00	27.00	19.00	0.00
................................................................................TTGACCAAAATTTCAGGTGTGTGA..................................	24	1	48.00	0.00	45.00	3.00	0.00
................................................................................TTGAGCAAAATCTCAGGTGTGTGA..................................	24	1	47.00	2.00	37.00	8.00	0.00
................................................................................TTGAGCAAAATTTCCGGTGTGTGA..................................	24	1	46.00	2.00	36.00	8.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGTG...................................	23	1	44.00	1.00	21.00	21.00	1.00
................................................................................TTAAGCAAAATTTCAGGTGTGTGA..................................	24	1	43.00	0.00	34.00	9.00	0.00
................................................................................TTCAGCAAAATTTCAGGTGTGTGA..................................	24	1	42.00	0.00	40.00	2.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTCTGA..................................	24	1	42.00	2.00	37.00	3.00	0.00
................................................................................TTGAGCAAAACTTCAGGTGTGTGA..................................	24	1	42.00	1.00	31.00	10.00	0.00
................................................................................TTGAGCAAAATTTCAGATGTGTGA..................................	24	1	41.00	0.00	33.00	8.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTATGA..................................	24	1	41.00	0.00	32.00	9.00	0.00
................................................................................TTGAGCAAAATTTCAGGTATGTGA..................................	24	1	41.00	0.00	33.00	8.00	0.00
................................................................................TTGAACAAAATTTCAGGTGTGTGA..................................	24	1	38.00	0.00	27.00	11.00	0.00
................................................................................TTGAGCAAACTTTCAGGTGTGTGA..................................	24	1	38.00	0.00	37.00	1.00	0.00
.................................................................................TTAGCAAAATTTCAGGTGTGTGA..................................	23	1	37.00	0.00	37.00	0.00	0.00
................................................................................TTGAGCAAAATTTAAGGTGTGTG...................................	23	1	36.00	0.00	10.00	26.00	0.00
................................................................................TTGAGCAAAATTTCAGGTxTGTGA..................................	23	2	17.50	1.00	16.00	0.50	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGTGA..................................	24	1	35.00	2.00	30.00	3.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGTG...................................	23	1	35.00	0.00	11.00	24.00	0.00
................................................................................TTGAGCAAGATTTCAGGTGTGTGA..................................	24	1	33.00	0.00	33.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGT..................................	23	1	32.00	4.00	12.00	16.00	0.00
................................................................................CTGAGCAAAATTTCAGGTGTGTG...................................	23	1	32.00	1.00	9.00	22.00	0.00
................................................................................TTGCGCAAAATTTCAGGTGTGTGA..................................	24	1	30.00	2.00	26.00	2.00	0.00
................................................................................TTGAGCAACATTTCAGGTGTGTGA..................................	24	1	28.00	2.00	23.00	3.00	0.00
................................................................................TTGAGCAAAATTTTAGGTGTGTGA..................................	24	1	28.00	2.00	22.00	4.00	0.00
................................................................................TTGAGCAAAATTTCAGGAGTGTG...................................	23	1	27.00	0.00	11.00	16.00	0.00
................................................................................TTGAGCAAAATTTCAGCTGTGTGA..................................	24	1	27.00	0.00	24.00	3.00	0.00
................................................................................TTGAGCAAAAxTTCAGGTGTGTGA..................................	23	1	27.00	0.00	24.00	3.00	0.00
................................................................................TTGAGCAAAATTTCGGGTGTGTG...................................	23	1	27.00	1.00	14.00	12.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGGGTGA..................................	24	1	26.00	0.00	22.00	3.00	1.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGTG...................................	24	1	26.00	0.00	17.00	9.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGCG...................................	23	1	26.00	1.00	12.00	13.00	0.00
................................................................................TTTAGCAAAATTTCAGGTGTGTG...................................	23	1	26.00	0.00	20.00	6.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTG...................................	23	1	26.00	2.00	13.00	11.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTCA..................................	24	1	25.00	0.00	24.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAAGTGTGTGA..................................	24	1	25.00	1.00	19.00	5.00	0.00
................................................................................TTGAGCACAATTTCAGGTGTGTGA..................................	24	1	25.00	1.00	18.00	6.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTAA..................................	24	1	24.00	1.00	20.00	3.00	0.00
................................................................................TTGAGCAAAAATTCAGGTGTGTGA..................................	24	1	22.00	0.00	20.00	2.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTC...................................	23	1	22.00	2.00	5.00	15.00	0.00
..................................................................................GAGCAAAATTTCAGGTGTGTGA..................................	22	1	22.00	0.00	18.00	4.00	0.00
................................................................................TTGAGCAAAATTTCATGTGTGTG...................................	23	1	22.00	0.00	16.00	6.00	0.00
................................................................................TTGATCAAAATTTCAGGTGTGTG...................................	23	1	22.00	0.00	16.00	6.00	0.00
................................................................................TTGAGCAAAATTTCACGTGTGTGA..................................	24	1	22.00	1.00	19.00	2.00	0.00
................................................................................TTAAGCAAAATTTCAGGTGTGTG...................................	23	1	20.00	0.00	7.00	13.00	0.00
................................................................................TTGAGCAAAATTTCCGGTGTGTG...................................	23	1	19.00	0.00	8.00	11.00	0.00
................................................................................TTGAGCAAAATTTCAGGTTTGTG...................................	23	1	19.00	0.00	10.00	9.00	0.00
................................................................................TTGAGCAAAATTTCAGGTG.......................................	19	1	19.00	0.00	3.00	2.00	14.00
................................................................................TTGAGCAAAATTTCAGGTGTGTT...................................	23	1	18.00	1.00	11.00	6.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGGGA..................................	24	1	18.00	0.00	12.00	6.00	0.00
................................................................................TTGAGCxxAATTTCAGGTGTGTG...................................	21	1	18.00	0.00	8.00	10.00	0.00
................................................................................ATGAGCAAAATTTCAGGTGTGTGA..................................	24	1	18.00	0.00	9.00	9.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTATG...................................	23	1	17.00	0.00	1.00	16.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTTTG...................................	23	1	16.00	0.00	8.00	7.00	1.00
................................................................................TTGGGCAAAATTTCAGGTGTGTG...................................	23	1	16.00	0.00	8.00	8.00	0.00

droVir3

TGCTATCC-CTTG--GCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACA-ATTGAGACATCTAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT-------------------------	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
................................................................................TTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	6242.00	3147.00	524.00	2563.00	2.00	6.00
................................................................................TTGAGCAAAATTTCAGGTGTGT....................................	22	1	3212.00	2379.00	659.00	137.00	4.00	33.00
................................................................................TTGAGCAAAATTTCAGGTGTGTG...................................	23	1	2641.00	1592.00	281.00	749.00	6.00	13.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGA..................................	23	1	796.00	274.00	77.00	439.00	2.00	4.00
................................................................................TTGAGCAAAATTTCAGGTGTG.....................................	21	1	376.00	268.00	66.00	29.00	2.00	11.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGT..................................	24	1	275.00	208.00	36.00	31.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTG...................................	22	1	189.00	100.00	28.00	57.00	0.00	4.00
..............................TCGCGCCTGTATCTTGCTGAACC.....................................................................................	23	1	152.00	1.00	0.00	1.00	47.00	103.00
.................................................................................TGAGCAAAATTTCAGGTGTGT....................................	21	1	119.00	70.00	42.00	4.00	1.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGT......................................	20	1	73.00	60.00	13.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTA..................................	24	1	73.00	2.00	2.00	69.00	0.00	0.00
................................................................................GTGAGCAAAGTTTCAGGTGTGT....................................	22	1	56.00	0.00	56.00	0.00	0.00	0.00
..............................TCGCGCCTGTATCTTGCTGAAC......................................................................................	22	1	54.00	1.00	0.00	1.00	10.00	42.00
................................................................................TTGAGCAAAATTTCAGGTGTGTT...................................	23	1	34.00	18.00	5.00	11.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	29.00	13.00	3.00	13.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.................................	25	1	26.00	21.00	1.00	3.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGA..................................	24	1	26.00	7.00	6.00	13.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTGA..................................	24	1	25.00	11.00	4.00	9.00	0.00	1.00
..............................TCGCGCCTGTATCTTGCTGA........................................................................................	20	1	24.00	0.00	0.00	0.00	8.00	16.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGT..................................	23	1	22.00	14.00	6.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGC....................................	22	1	20.00	5.00	4.00	0.00	5.00	6.00
................................................................................TTGAGCAAAATTTCAGGTGTTTGA..................................	24	1	19.00	0.00	0.00	19.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.................................	25	1	19.00	10.00	4.00	4.00	0.00	1.00
................................................................................TTGAGCAAAATTTCATGTGTGTGA..................................	24	1	18.00	2.00	0.00	16.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGTGA..................................	24	1	17.00	3.00	0.00	14.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGAGTGTGA..................................	24	1	17.00	9.00	3.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGG..................................	24	1	15.00	2.00	2.00	6.00	1.00	4.00
................................................................................TTGAGCAAAATTTCAGGTGTGG....................................	22	1	15.00	5.00	1.00	0.00	6.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTGCGA..................................	24	1	15.00	6.00	2.00	7.00	0.00	0.00
................................................................................TTTAGCAAAATTTCAGGTGTGTGA..................................	24	1	14.00	1.00	0.00	13.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTAA..................................	24	1	14.00	8.00	2.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGATGTGTGA..................................	24	1	13.00	8.00	0.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTG.......................................	19	1	12.00	0.00	0.00	0.00	2.00	10.00
................................................................................TTGAGCAAAATTTCAGGCGTGT....................................	22	1	12.00	6.00	5.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGTG...................................	23	1	12.00	6.00	4.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGC..................................	24	1	12.00	2.00	3.00	7.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTTTGTGA..................................	24	1	12.00	0.00	0.00	12.00	0.00	0.00
................................................................................TTGAGCAAAGTTTCAGGTGTGTGA..................................	24	1	11.00	3.00	1.00	7.00	0.00	0.00
................................................................................TTGAGCAAAATTTCCGGTGTGTGA..................................	24	1	11.00	5.00	0.00	6.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGTG...................................	23	1	10.00	6.00	1.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCGGGTGTGTGA..................................	24	1	10.00	3.00	1.00	5.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGA....................................	22	1	10.00	10.00	0.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGTG...................................	23	1	10.00	4.00	4.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTA...................................	23	1	10.00	8.00	0.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGGGTGT....................................	22	1	9.00	5.00	3.00	1.00	0.00	0.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGTGA..................................	25	1	9.00	4.00	1.00	4.00	0.00	0.00
................................................................................TTGAGCAGAATTTCAGGTGTGTGA..................................	24	1	9.00	4.00	1.00	4.00	0.00	0.00
................................................................................TTGGGCAAAATTTCAGGTGTGTGA..................................	24	1	9.00	2.00	0.00	7.00	0.00	0.00
................................................................................TTGAGCAAAATTTCATGTGTGTG...................................	23	1	9.00	1.00	0.00	8.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGT....................................	22	1	9.00	4.00	5.00	0.00	0.00	0.00
................................................................................TTGATCAAAATTTCAGGTGTGTGA..................................	24	1	9.00	2.00	0.00	7.00	0.00	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGTGA..................................	24	1	8.00	2.00	0.00	6.00	0.00	0.00
................................................................................CTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	8.00	2.00	0.00	6.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTCA..................................	24	1	8.00	1.00	1.00	6.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAT.................................	24	1	8.00	2.00	1.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTCTGTG...................................	23	1	8.00	1.00	1.00	6.00	0.00	0.00
................................................................................TTGAGCAAACTTTCAGGTGTGTGA..................................	24	1	8.00	0.00	1.00	7.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAA.................................	24	1	8.00	3.00	0.00	3.00	1.00	1.00
..................................................................................GAGCAAAATTTCAGGTGTGTGA..................................	22	1	7.00	3.00	1.00	3.00	0.00	0.00
................................................................................TTGAGCAAAGTTTCAGGTGTGT....................................	22	1	7.00	5.00	2.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGCGT....................................	22	1	7.00	4.00	2.00	1.00	0.00	0.00
................................................................................TTGAGCAACATTTCAGGTGTGTGA..................................	24	1	7.00	0.00	2.00	5.00	0.00	0.00
................................................................................TTGAGCAAAATTTCGGGTGTGT....................................	22	1	7.00	6.00	1.00	0.00	0.00	0.00
................................................................................TGGAGCAAAATTTCAGGTGTGTGA..................................	24	1	7.00	0.00	5.00	2.00	0.00	0.00
................................................................................TGGAGCAAAATTTCAGGTGTGT....................................	22	1	7.00	0.00	7.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCCGGTGTGTG...................................	23	1	6.00	1.00	1.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTCTGA..................................	24	1	6.00	1.00	1.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTCTG...................................	23	1	6.00	3.00	1.00	2.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTTA..................................	23	1	6.00	0.00	0.00	6.00	0.00	0.00
..............................TCGCGCCTGTATCTTGCTGG........................................................................................	20	1	6.00	0.00	0.00	0.00	4.00	2.00
................................................................................TTGAGAAAAATTTCAGGTGTGTGA..................................	24	1	6.00	2.00	3.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGCG...................................	23	1	6.00	2.00	2.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTCCAGGTGTGTGA..................................	24	1	6.00	4.00	0.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGCTGTGT....................................	22	1	6.00	2.00	3.00	1.00	0.00	0.00
................................................................................TTGAGCxxAATTTCAGGTGTGT....................................	20	1	5.00	4.00	1.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGAGTGTG...................................	23	1	5.00	2.00	0.00	3.00	0.00	0.00
................................................................................GTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	5.00	2.00	1.00	2.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGG..................................	23	1	5.00	2.00	1.00	0.00	0.00	2.00
................................................................................TTGAGCAAAATTTCGGGTGTGTG...................................	23	1	5.00	4.00	1.00	0.00	0.00	0.00
................................................................................TTGAGCAAGATTTCAGGTGTGTGA..................................	24	1	5.00	0.00	2.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATCTCAGGTGTGTG...................................	23	1	5.00	1.00	0.00	4.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGAGA..................................	24	1	5.00	3.00	0.00	2.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGCTGTGTGA..................................	24	1	5.00	0.00	1.00	4.00	0.00	0.00
................................................................................TTGAGCAAAACTTCAGGTGTGTGA..................................	24	1	5.00	2.00	0.00	3.00	0.00	0.00
..............................TCGCGCCTGTATCTTGCTGAA.......................................................................................	21	1	5.00	1.00	0.00	0.00	0.00	4.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGT....................................	23	1	5.00	4.00	0.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATCTCAGGTGTGTGA..................................	24	1	5.00	3.00	0.00	2.00	0.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGT....................................	22	1	5.00	3.00	2.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTCTGTGA..................................	24	1	5.00	2.00	0.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGAGTGT....................................	22	1	5.00	4.00	1.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAxGTGTGT....................................	21	2	2.50	2.50	0.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCGTGTGTGTGA..................................	24	1	5.00	5.00	0.00	0.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTT...................................	22	1	5.00	2.00	1.00	2.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTTTGA..................................	23	1	4.00	0.00	1.00	3.00	0.00	0.00
................................................................................TTAAGCAAAATTTCAGGTGTGTGA..................................	24	1	4.00	2.00	0.00	2.00	0.00	0.00
................................................................................TTGAGTAAAATTTCAGGTGTGTGA..................................	24	1	4.00	3.00	1.00	0.00	0.00	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGT....................................	22	1	4.00	4.00	0.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGATGTGTG...................................	23	1	4.00	4.00	0.00	0.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGC..................................	23	1	4.00	1.00	1.00	1.00	0.00	1.00
................................................................................GTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	4.00	0.00	0.00	4.00	0.00	0.00

droMoj3

AGCTA-TC-CTTA--GCCGGCATCTTTCATTCGCGCCTGTATCTTGCTGAACCGTTACA-ATTGTCACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTCTCATCA----AAGCA---	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
................................................................................TTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	4667.00	2048.00	254.00	144.00	2221.00
................................................................................TTGAGCAAAATTTCAGGTGTGT....................................	22	1	2582.00	1774.00	446.00	277.00	85.00
................................................................................TTGAGCAAAATTTCAGGTGTGTG...................................	23	1	1234.00	801.00	77.00	66.00	290.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGA..................................	23	1	620.00	239.00	51.00	31.00	299.00
................................................................................TTGAGCAAAATTTCAGGTGTG.....................................	21	1	298.00	204.00	41.00	28.00	25.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGT..................................	24	1	166.00	121.00	16.00	11.00	18.00
.................................................................................TGAGCAAAATTTCAGGTGTGT....................................	21	1	131.00	81.00	32.00	14.00	4.00
.................................................................................TGAGCAAAATTTCAGGTGTGTG...................................	22	1	122.00	68.00	20.00	11.00	23.00
................................................................................TTGAGCAAAATTTCAGGTGT......................................	20	1	93.00	64.00	14.00	12.00	3.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGT..................................	23	1	26.00	15.00	10.00	1.00	0.00
..............................TCGCGCCTGTATCTTGCTGAACC.....................................................................................	23	1	24.00	1.00	2.00	0.00	21.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.................................	25	1	21.00	8.00	5.00	1.00	7.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGA..................................	24	1	18.00	1.00	1.00	0.00	16.00
................................................................................TTGAGCAAAATTTCAGGTGTGTC...................................	23	1	17.00	13.00	3.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGG..................................	24	1	12.00	6.00	0.00	2.00	4.00
................................................................................TTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	10.00	3.00	3.00	1.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.................................	25	1	10.00	7.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTA..................................	24	1	10.00	2.00	2.00	1.00	5.00
..............................TCGCGCCTGTATCTTGCTGAAC......................................................................................	22	1	9.00	1.00	3.00	0.00	5.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGC..................................	24	1	9.00	0.00	0.00	0.00	9.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAA.................................	24	1	9.00	3.00	0.00	1.00	5.00
................................................................................TTGAGCAAAATTTCAGGTGCGTGA..................................	24	1	8.00	6.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGGCGTGTG...................................	23	1	7.00	2.00	1.00	2.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGTGTT...................................	23	1	7.00	4.00	1.00	2.00	0.00
................................................................................TTGAGCAAAATTTCGGGTGTGTGA..................................	24	1	7.00	2.00	1.00	0.00	4.00
................................................................................TTGAGCAAAATTTCAGGGGTGT....................................	22	1	7.00	2.00	3.00	2.00	0.00
................................................................................TTGATCAAAATTTCAGGTGTGTGA..................................	24	1	7.00	6.00	0.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGA....................................	22	1	7.00	5.00	0.00	0.00	2.00
................................................................................TTGAGCAAAATTTCAGGTTTGTGA..................................	24	1	6.00	4.00	0.00	0.00	2.00
................................................................................TTGAGCAAAGTTTCAGGTGTGTGA..................................	24	1	6.00	2.00	0.00	0.00	4.00
................................................................................TTGAGCAAAATTTCAGGTGTGC....................................	22	1	6.00	3.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTCTGA..................................	24	1	6.00	4.00	0.00	0.00	2.00
................................................................................TTGAGCxxAATTTCAGGTGTGT....................................	20	1	6.00	5.00	1.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGATGTGT....................................	22	1	6.00	3.00	1.00	2.00	0.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGT....................................	23	1	6.00	1.00	3.00	2.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTG.....................................	20	1	6.00	2.00	1.00	3.00	0.00
................................................................................TTTAGCAAAATTTCAGGTGTGT....................................	22	1	5.00	5.00	0.00	0.00	0.00
.................................................................................TGAGAAAAATTTCAGGTGTGTGA..................................	23	1	5.00	0.00	0.00	0.00	5.00
................................................................................TTGAGCAAAATTTCAGGTGCGT....................................	22	1	5.00	1.00	3.00	0.00	1.00
................................................................................TTGAGCAAAATTTCATGTGTGTGA..................................	24	1	5.00	3.00	0.00	1.00	1.00
................................................................................TTGAGCAAAATTTCATGTGTGTG...................................	23	1	5.00	5.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCCGGTGTGTGA..................................	24	1	5.00	0.00	0.00	1.00	4.00
................................................................................TTGAGCAAAATTTCAGTTGTGT....................................	22	1	5.00	2.00	0.00	3.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGCGA..................................	24	1	5.00	1.00	1.00	1.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGGGTGA..................................	24	1	5.00	2.00	0.00	0.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTATGA..................................	24	1	5.00	1.00	0.00	0.00	4.00
................................................................................TTGAGCAAAATTTCGGGTGTGT....................................	22	1	5.00	1.00	2.00	2.00	0.00
................................................................................TTGAGCAAAATTTCAGTTGTGTGA..................................	24	1	5.00	2.00	0.00	1.00	2.00
................................................................................TGGAGCAAAATTTCAGGTGTGT....................................	22	1	5.00	2.00	3.00	0.00	0.00
................................................................................TGGAGCAAAATTTCAGGTGTGTGA..................................	24	1	4.00	0.00	0.00	0.00	4.00
................................................................................TTGAGCAAAATTTCAGGTGTGTA...................................	23	1	4.00	4.00	0.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.................................	25	1	4.00	3.00	0.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAGCTGTGTGA..................................	24	1	4.00	1.00	2.00	0.00	1.00
...............................................................................CTTGAGCAAAATTTCAGGTGTGTGA..................................	25	1	4.00	2.00	1.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGC..................................	24	1	4.00	0.00	0.00	0.00	4.00
................................................................................TTGATCAAAATTTCAGGTGTGT....................................	22	1	4.00	4.00	0.00	0.00	0.00
................................................................................TTTAGCAAAATTTCAGGTGTGTGA..................................	24	1	4.00	4.00	0.00	0.00	0.00
................................................................................TTAAGCAAAATTTCAGGTGTGTGA..................................	24	1	4.00	0.00	0.00	0.00	4.00
................................................................................TTGAGCAAAATTTCAGGCGTGT....................................	22	1	4.00	2.00	1.00	1.00	0.00
................................................................................TTGAGCAAACTTTCAGGTGTGTG...................................	23	1	4.00	0.00	0.00	2.00	2.00
................................................................................TTGAGCAAAATTCCAGGTGTGT....................................	22	1	4.00	1.00	3.00	0.00	0.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTT..................................	24	1	3.00	2.00	1.00	0.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGT....................................	22	1	3.00	1.00	2.00	0.00	0.00
................................................................................TTGAGAAAAATTTCAGGTGTGTG...................................	23	1	3.00	2.00	0.00	0.00	1.00
................................................................................TCGAGCAAAATTTCAGGTGTGTGA..................................	24	1	3.00	0.00	0.00	0.00	3.00
................................................................................TTGAGCAAAATTTCAGGTATGTGA..................................	24	1	3.00	1.00	0.00	0.00	2.00
................................................................................TTGCGCAAAATTTCAGGTGTGT....................................	22	1	3.00	0.00	1.00	2.00	0.00
................................................................................TTGAGCGAAATTTCAGGTGTGT....................................	22	1	3.00	2.00	0.00	1.00	0.00
................................................................................TTGAGTAAAATTTCAGGTGTGTGA..................................	24	1	3.00	2.00	0.00	0.00	1.00
................................................................................TTGAGCAAAATTTCAGGAGTGTGA..................................	24	1	3.00	1.00	0.00	1.00	1.00
................................................................................TTGAGCAGAATTTCAGGTGTGT....................................	22	1	3.00	0.00	0.00	3.00	0.00
................................................................................TTGAGCAAGATTTCAGGTGTGTGA..................................	24	1	3.00	1.00	0.00	0.00	2.00
................................................................................TTGAGCAAACTTTCAGGTGTGT....................................	22	1	3.00	1.00	1.00	1.00	0.00
................................................................................TTGAGCAAAATTTAAGGTGTGTGA..................................	24	1	3.00	1.00	0.00	1.00	1.00
................................................................................TTGAGCAAAATTTCAGGTTTGT....................................	22	1	3.00	3.00	0.00	0.00	0.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGG..................................	23	1	3.00	2.00	0.00	0.00	1.00
..............................TCGCGCCTGTATCTTGCTGA........................................................................................	20	1	3.00	0.00	2.00	1.00	0.00
................................................................................TGGAGCAAAATTTCAGGTGTGTGT..................................	24	1	3.00	0.00	0.00	0.00	3.00
................................................................................TTGAGCAAAATGTCAGGTGTGT....................................	22	1	3.00	0.00	2.00	1.00	0.00
................................................................................TTGAGCAAAATTTCAAGTGTGTGA..................................	24	1	3.00	0.00	0.00	0.00	3.00
................................................................................TTGAGCAAAATTTCAGATGTGTGA..................................	24	1	3.00	0.00	0.00	1.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGAGTGA..................................	24	1	3.00	3.00	0.00	0.00	0.00
................................................................................TTGAGCAAGATTTCAGGTGTGT....................................	22	1	3.00	1.00	2.00	0.00	0.00
................................................................................CTGAGCAAAATTTCAGGTGTGT....................................	22	1	3.00	3.00	0.00	0.00	0.00
................................................................................TTGAGCAGAATTTCAGGTGTGTGA..................................	24	1	3.00	0.00	1.00	0.00	2.00
................................................................................TTGAGCAAAATTCCAGGTGTGTGA..................................	24	1	3.00	1.00	0.00	0.00	2.00
................................................................................TTGAACAAAATTTCAGGTGTGTGA..................................	24	1	3.00	0.00	0.00	0.00	3.00
................................................................................TTGAGTAAAATTTCAGGTGTGT....................................	22	1	3.00	2.00	1.00	0.00	0.00

droGri2

TGTTA-TC-CTTG--ACCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACC-ATTGTGACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGCTTCATCACTTGGTGGA---	Size	Hit Count	Total Norm	V109 Male body
................................................................................TTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	470.00	470.00
................................................................................TTGAGCAAAATTTCAGGTGTGT....................................	22	1	230.00	230.00
................................................................................TTGAGCAAAATTTCAGGTGTGTG...................................	23	1	144.00	144.00
................................................................................TTGAGCAAAATTTCAGGTGTG.....................................	21	1	45.00	45.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGA..................................	23	1	42.00	42.00
.................................................................................TGAGCAAAATTTCAGGTGTGT....................................	21	1	7.00	7.00
................................................................................TTGAGCAAAATTTCAGGTGTGTCA..................................	24	1	7.00	7.00
.................................................................................TGAGCAAAATTTCAGGTGTGTG...................................	22	1	6.00	6.00
................................................................................TTGAGCAAAATTTCAGGCGTGTGA..................................	24	1	6.00	6.00
................................................................................TTGAGCAAAATTTCAGGCGTGTG...................................	23	1	5.00	5.00
................................................................................TTGAGCAAAATTTCAGGCGTGT....................................	22	1	5.00	5.00
................................................................................TTGAGCAAAATTTCAGGTGTGTTA..................................	24	1	4.00	4.00
................................................................................TTGAGCAAAATTTCAGGAGTGTGA..................................	24	1	4.00	4.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGT..................................	24	1	4.00	4.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.................................	25	1	3.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.................................	25	1	3.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTCTGA..................................	24	1	3.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGTGA....................................	22	1	3.00	3.00
................................................................................TTGAGCAAAATTTCAGGTGT......................................	20	1	3.00	3.00
................................................................................TTGAGCAAAATTTCAGGGGTGTGA..................................	24	1	2.00	2.00
................................................................................TTGAGCAAAATTTCAAGTGTG.....................................	21	1	2.00	2.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAA.................................	24	1	2.00	2.00
................................................................................TTGAGCCAAATTTCAGGTGTGTGA..................................	24	1	2.00	2.00
................................................................................TTGAGCAACATTTCAGGTGTGTG...................................	23	1	2.00	2.00
................................................................................TTGAGCAAGATTTCAGGTGTGTGA..................................	24	1	2.00	2.00
................................................................................TTGAACAAAATTTCAGGTGTGT....................................	22	1	2.00	2.00
................................................................................CTGAGCAAAATTTCAGGTGTGTGA..................................	24	1	2.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGTGTAA..................................	24	1	2.00	2.00
................................................................................TTCAGCAAAATTTCAGGTGTGT....................................	22	1	2.00	2.00
................................................................................TTGAGCTAAATTTCAGGTGTGTGA..................................	24	1	2.00	2.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGT..................................	23	1	2.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGTGTT...................................	23	1	2.00	2.00
................................................................................TTGAGCAAAATTTCAGGTGTGTA...................................	23	1	2.00	2.00
................................................................................GTGAGCAAAGTTTCAGGTGTGT....................................	22	1	1.00	1.00
................................................................................TTGAGCAAAATTTCAGGTCTGTGA..................................	24	1	1.00	1.00
..............................TCGCGCCTGTATCTTGCTGAAC......................................................................................	22	1	1.00	1.00
................................................................................TTGAGCAAAATTTCGTGTGTGTGA..................................	24	1	1.00	1.00
................................................................................TTGAGCAAAATTTCAGCTGTGTGA..................................	24	1	1.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTCT....................................	22	1	1.00	1.00
................................................................................TTAAGCAAAATTTCCGGTGTGTGA..................................	24	1	1.00	1.00
................................................................................TTGAGCAAAATTTCAGGAGTGTG...................................	23	1	1.00	1.00
................................................................................TTGAGCAACATTTCAGGTGTGTGA..................................	24	1	1.00	1.00
................................................................................TTGAGCAAAATTTTAGGTGTGTGA..................................	24	1	1.00	1.00
................................................................................TTGAGCCAAATTTCAGGTGTGT....................................	22	1	1.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGTGTC...................................	23	1	1.00	1.00
................................................................................TTGAGCAAAGTTTCAGGTGTGTCA..................................	24	1	1.00	1.00
................................................................................TTGAGCAAAATTTCAGGAGTGT....................................	22	1	1.00	1.00
................................................................................TTGAGCAAAATTTCAGCTGTGT....................................	22	1	1.00	1.00
................................................................................TTGAGCAAAATTTCxGGTGTGTGA..................................	23	1	1.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGTGTGAT.................................	24	1	1.00	1.00
................................................................................TTTAGCAAAATTTCAGGTGTGT....................................	22	1	1.00	1.00
................................................................................TTGAGAAAAATTTCAGGTGTGTGA..................................	24	1	1.00	1.00
................................................................................TTCAGCAAAATTTCAGGTGTGTGA..................................	24	1	1.00	1.00
................................................................................TTGAGCAAAATTTCAGGTGCGT....................................	22	1	1.00	1.00
................................................................................TTCAGCAAAATTTCAGGTGTGTG...................................	23	1	1.00	1.00
................................................................................TTGAGCCAAATTTCAxGTGTGTGA..................................	23	1	1.00	1.00
................................................................................TTGAGCAAAATTTCTGGTGTGT....................................	22	1	1.00	1.00
................................................................................TTGACCAAAATTTCAGGTGTGTGA..................................	24	1	1.00	1.00
................................................................................TTGAGCAACATTTCAGGTGTGA....................................	22	1	1.00	1.00
................................................................................TTGAGCAAAACTTCAGGTGTGT....................................	22	1	1.00	1.00
................................................................................TTGAGCAAACTTTCAGGTGTGTGA..................................	24	1	1.00	1.00
................................................................................TTGAGCAATATTTCAGGTGT......................................	20	1	1.00	1.00
................................................................................TTGAGCAAAATTCCAGGTGTGT....................................	22	1	1.00	1.00
................................................................................TTAAGCAAAATTTCAGGTGTGT....................................	22	1	1.00	1.00
.................................................................................TGAGCAAAATTTCAGGTGTGA....................................	21	1	1.00	1.00
................................................................................TTGAGCAACATTTCAGGTGTGT....................................	22	1	1.00	1.00
................................................................................TTGAGGAAAATTTCAGGTGTGT....................................	22	1	1.00	1.00
................................................................................TTGAGCAAAATTTCAGGGGTGTG...................................	23	1	1.00	1.00
................................................................................TTGAGCxAAATTTCAGGTGTGTGA..................................	23	1	1.00	1.00
................................................................................TTGAGCAAAATTTCAGGTG.......................................	19	1	1.00	1.00
.................................................................................TGAGCAAAATTTCAGGTCTGTGA..................................	23	1	1.00	1.00
................................................................................TTAAGCAAAATTTCAGCTGTGT....................................	22	1	1.00	1.00
................................................................................TTGAGCAAGATTTCAGGTGTGT....................................	22	1	1.00	1.00
................................................................................TTGAACAAAATTTCAGGTGTGTGA..................................	24	1	1.00	1.00
................................................................................TTGAGCGAAATTTCAGGTGTGTG...................................	23	1	1.00	1.00
................................................................................TTGAGCAAAATTTAAGGTGTGTGA..................................	24	1	1.00	1.00
................................................................................TTGAGCAAAATTTCAAGTGTGTG...................................	23	1	1.00	1.00

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image