Possible Orthologs for dme-mir-87

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2L:9739846-9739974 -	93.87	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT CTTAAGTCCTTTGGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATCATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGATTT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...........................................................................TTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 6683.00 5937.00 155.00 20.00 571.00 ...........................TCGCGCCTGTATCTTGCTGAACC............................................................................... 23 1 1924.00 13.00 347.00 37.00 1527.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTG............................... 23 1 1922.00 1222.00 289.00 17.00 394.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGA.............................. 23 1 1237.00 931.00 95.00 10.00 201.00 ...........................TCGCGCCTGTATCTTGCTGAAC................................................................................ 22 1 632.00 8.00 307.00 47.00 270.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGT................................ 22 1 391.00 76.00 268.00 30.00 17.00 ............................................................................TGAGCAAAATTTCAGGTGTGTG............................... 22 1 309.00 92.00 146.00 8.00 63.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGG.............................. 24 1 229.00 12.00 43.00 5.00 169.00 ...........................................................................TTGAGCAAAATTTCAGGTGTG................................. 21 1 152.00 17.00 78.00 18.00 39.00 ...........................................................................TTGAGCAAAATTTCAGGTG................................... 19 1 116.00 0.00 77.00 17.00 22.00 ............................CGCGCCTGTATCTTGCTGAACC............................................................................... 22 1 107.00 0.00 11.00 0.00 96.00 ...........................TCGCGCCTGTATCTTGCTGA.................................................................................. 20 1 99.00 0.00 83.00 9.00 7.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGT.............................. 24 1 82.00 51.00 20.00 3.00 8.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGG.............................. 23 1 79.00 1.00 8.00 3.00 67.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGC................................ 22 1 61.00 0.00 54.00 6.00 1.00 ............................................................................TGAGCAAAATTTCAGGTGTG................................. 20 1 47.00 0.00 25.00 2.00 20.00 ............................................................................TGAGCAAAATTTCAGGTGTGT................................ 21 1 46.00 1.00 37.00 8.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGG................................ 22 1 41.00 0.00 32.00 6.00 3.00 ...........................................................................TTGAGCAAAATTTCAGGCGTGTGA.............................. 24 1 37.00 36.00 1.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGC.............................. 24 1 33.00 23.00 5.00 0.00 5.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAT............................. 25 1 26.00 6.00 10.00 1.00 9.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGT.............................. 23 1 25.00 5.00 17.00 2.00 1.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAA............................. 24 1 23.00 6.00 12.00 0.00 5.00 ...........................TCGCGCCTGTATCTTGCTGAA................................................................................. 21 1 22.00 0.00 17.00 0.00 5.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAT............................. 24 1 21.00 2.00 12.00 3.00 4.00 ...........................................................................TTGAGCAAAATTTCCGGTGTGTGA.............................. 24 1 19.00 19.00 0.00 0.00 0.00 ...........................TCGCGCCTGTATCTTGCTGG.................................................................................. 20 1 18.00 0.00 16.00 1.00 1.00 .............................GCGCCTGTATCTTGCTGAACC............................................................................... 21 1 17.00 0.00 1.00 2.00 14.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTTA.............................. 24 1 17.00 17.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAACTTTCAGGTGTGTGA.............................. 24 1 16.00 16.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGGGTGTGA.............................. 24 1 15.00 14.00 0.00 0.00 1.00 ...........................................................................TGGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 14.00 14.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGCGTGA.............................. 24 1 14.00 14.00 0.00 0.00 0.00 ............................................................................TGAGCAAAATTTCAGGTG................................... 18 1 14.00 0.00 6.00 1.00 7.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAA............................. 25 1 13.00 10.00 1.00 0.00 2.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGCGA.............................. 24 1 13.00 11.00 0.00 0.00 2.00 ...........................TCTCGCCTGTATCTTGCTGAACC............................................................................... 23 1 12.00 0.00 2.00 0.00 10.00 ...........................................................................TTGGGCAAAATTTCAGGTGTGTGA.............................. 24 1 11.00 10.00 1.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCTGGTGTGTGA.............................. 24 1 11.00 11.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTAAGGTGTGTGA.............................. 24 1 10.00 10.00 0.00 0.00 0.00 ...........................................................................TTAAGCAAAATTTCAGGTGTGTGA.............................. 24 1 10.00 10.00 0.00 0.00 0.00 ............................................................................TGAGCAAAATTTCAGGTGTGG................................ 21 1 10.00 0.00 8.00 1.00 1.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTT............................... 23 1 9.00 4.00 4.00 1.00 0.00 ............................................................................TGAGCAAAATTTCAGGTGTGC................................ 21 1 9.00 0.00 8.00 1.00 0.00 ...........................TCTCGCCTGTATCTTGCTGAAC................................................................................ 22 1 8.00 0.00 7.00 0.00 1.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGC.............................. 23 1 8.00 4.00 4.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGAGTGTGA.............................. 24 1 8.00 8.00 0.00 0.00 0.00 ...........................................................................TTGAGCACAATTTCAGGTGTGTGA.............................. 24 1 8.00 8.00 0.00 0.00 0.00 ...........................................................................TTGAGCAGAATTTCAGGTGTGTGA.............................. 24 1 8.00 8.00 0.00 0.00 0.00 ...........................TCGCTCCTGTATCTTGCTGAACC............................................................................... 23 1 7.00 0.00 1.00 0.00 6.00 ...........................TCGCGCCTGCATCTTGCTGAACC............................................................................... 23 1 7.00 0.00 0.00 0.00 7.00 ...........................................................................CTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 7.00 7.00 0.00 0.00 0.00 ............................................................................TGAGCAAAATTTCAGGCGTGTGA.............................. 23 1 7.00 7.00 0.00 0.00 0.00 .................................................CGCTGCCATCATGGCCAACGATCCGGT..................................................... 27 1 7.00 0.00 2.00 1.00 4.00 ...........................................................................TTGAGAAAAATTTCAGGTGTGTGA.............................. 24 1 7.00 7.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGGGTGA.............................. 24 1 7.00 6.00 1.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTTAGGTGTGTGA.............................. 24 1 7.00 6.00 0.00 0.00 1.00 ...........................................................................TTGAGCAAAATTTCAGTTGTGTGA.............................. 24 1 7.00 5.00 0.00 0.00 2.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAGT............................ 25 1 6.00 1.00 0.00 0.00 5.00 ...........................................................................TTGAGCAACATTTCAGGTGTGTGA.............................. 24 1 6.00 6.00 0.00 0.00 0.00 ............................................................................TGAGAAAAATTTCAGGTGTGTGA.............................. 23 1 6.00 6.00 0.00 0.00 0.00 ...........................................................................TTGAGAAAAATTTCAGGTGTGTG............................... 23 1 6.00 6.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCGGGTGTGTGA.............................. 24 1 6.00 6.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAC............................. 25 1 6.00 0.00 4.00 0.00 2.00 ...........................................................................TTGAGCAAGATTTCAGGTGTGTGA.............................. 24 1 6.00 6.00 0.00 0.00 0.00 ...........................................................................ATGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 6.00 6.00 0.00 0.00 0.00 ...........................TCGCGCCTGGATCTTGCTGAACC............................................................................... 23 1 6.00 0.00 1.00 0.00 5.00 ............................................................................TGAGCAAAATTTCAGGGGTGTGA.............................. 23 1 6.00 4.00 2.00 0.00 0.00 .............................................................................GAGCAAAATTTCAGGTGTGTGA.............................. 22 1 6.00 6.00 0.00 0.00 0.00 ...........................................................................TTGAACAAAATTTCAGGTGTGTGA.............................. 24 1 6.00 6.00 0.00 0.00 0.00 ...........................TCGCGCCTGTATCTTGCTGAACA............................................................................... 23 1 6.00 0.00 3.00 1.00 2.00 ...........................TCGCGCCTGTATCTTGCTGAAA................................................................................ 22 1 6.00 0.00 5.00 1.00 0.00 ...........................................................................TTGAGCGAAATTTCAGGTGTGTGA.............................. 24 1 5.00 5.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGCGTGTG............................... 23 1 5.00 5.00 0.00 0.00 0.00 ..........................................................................CTTGAGCAAAATTTCAGGTGTGTGA.............................. 25 1 5.00 5.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGGGTGTG............................... 23 1 5.00 2.00 0.00 0.00 3.00 ..................................................GCTGCCATCATGGCCAACGATCCGG...................................................... 25 1 5.00 2.00 0.00 0.00 3.00 ...........................TCGCGCCCGTATCTTGCTGAACC............................................................................... 23 1 5.00 0.00 1.00 0.00 4.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAAT............................ 25 1 5.00 0.00 2.00 0.00 3.00 ...........................TCGCGCCTGTATCTTGCTGAACT............................................................................... 23 1 5.00 0.00 3.00 0.00 2.00 ............................................................................TGAGCAAAATTTCAGGTGTGTTA.............................. 23 1 5.00 5.00 0.00 0.00 0.00 ...........................................................................GTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 5.00 5.00 0.00 0.00 0.00 ............................................................................TGAGCAAAATTTCAGGTGCGTGA.............................. 23 1 5.00 5.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTTTGTGA.............................. 24 1 4.00 3.00 0.00 0.00 1.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAC............................. 24 1 4.00 1.00 0.00 0.00 3.00 ............................................................................TGAGCAAAATTTCATGTGTGTGA.............................. 23 1 4.00 4.00 0.00 0.00 0.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAAA............................ 25 1 4.00 0.00 3.00 0.00 1.00 ...........................TCCCGCCTGTATCTTGCTGAAC................................................................................ 22 1 4.00 0.00 2.00 0.00 2.00 ...........................................................................TCGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 4.00 4.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGGGTGT................................ 22 1 4.00 0.00 3.00 0.00 1.00 ...........................................................................TTGAGCAAAATGTCAGGTGTGTGA.............................. 24 1 4.00 4.00 0.00 0.00 0.00 ............................................................................TGAGCAAAATTTCAGTTGTGTGA.............................. 23 1 4.00 0.00 1.00 0.00 3.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGA................................ 22 1 4.00 0.00 2.00 0.00 2.00 ...........................TCGCGCCTTTATCTTGCTGAACC............................................................................... 23 1 4.00 0.00 4.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGGGT................................ 22 1 4.00 2.00 1.00 1.00 0.00 ...........................................................................TTGAGCAAAATTCCAGGTGTGTGA.............................. 24 1 4.00 4.00 0.00 0.00 0.00 ............................TCCGCCTGTATCTTGCTGAACC............................................................................... 22 1 3.00 0.00 0.00 0.00 3.00 ...........................................................................TTGAGTAAAATTTCAGGTGTGTG............................... 23 1 3.00 3.00 0.00 0.00 0.00 ............................................................................TTAGCAAAATTTCAGGTG................................... 18 1 3.00 0.00 0.00 0.00 3.00 ...........................................................................TTGAGCAAAATTTCAGGTTTG................................. 21 1 3.00 0.00 1.00 1.00 1.00 ...........................................................................TTGAGCAAAATTTTAGGTGTGTG............................... 23 1 3.00 3.00 0.00 0.00 0.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_3:5397127-5397255 -	93.87	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT ACCAAGTCCTTTGGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATCATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGATTT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ...........................................................................TTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 18964.00 4012.00 12194.00 2758.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTG............................... 23 1 6067.00 2222.00 2110.00 1735.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGT................................ 22 1 5082.00 2886.00 258.00 1938.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGA.............................. 23 1 3274.00 646.00 1921.00 707.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGT.............................. 24 1 868.00 447.00 69.00 352.00 ............................................................................TGAGCAAAATTTCAGGTGTGTG............................... 22 1 802.00 304.00 174.00 324.00 ...........................................................................TTGAGCAAAATTTCAGGTGTG................................. 21 1 706.00 352.00 41.00 313.00 ............................................................................TGAGCAAAATTTCAGGTGTGT................................ 21 1 239.00 113.00 7.00 119.00 ...........................TCGCGCCTGTATCTTGCTGAACC............................................................................... 23 1 184.00 2.00 182.00 0.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGT.............................. 23 1 167.00 82.00 6.00 79.00 ...........................................................................TTGAGCAAAATTTCAGGTGT.................................. 20 1 136.00 69.00 6.00 61.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAA............................. 25 1 123.00 33.00 72.00 18.00 ...........................................................................TTGAGCxxAATTTCAGGTGTGTGA.............................. 22 1 106.00 5.00 97.00 4.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGA................................ 22 1 103.00 27.00 57.00 19.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAT............................. 25 1 100.00 47.00 34.00 19.00 ...........................................................................TTGAGCxAAATTTCAGGTGTGTGA.............................. 23 1 75.00 3.00 70.00 2.00 ...........................TCGCGCCTGTATCTTGCTGAAC................................................................................ 22 1 74.00 6.00 60.00 8.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAA............................. 24 1 56.00 8.00 35.00 13.00 ...........................................................................TTGAGTAAAATTTCAGGTGTGTGA.............................. 24 1 54.00 0.00 52.00 2.00 ...........................................................................TTGAGCAAAATTTCAGGCGTGTGA.............................. 24 1 49.00 15.00 34.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTCTGTGA.............................. 24 1 47.00 31.00 13.00 3.00 ...........................................................................CTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 39.00 9.00 26.00 4.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAT............................. 24 1 37.00 7.00 20.00 10.00 ...........................................................................TTGAGCAAAAATTCAGGTGTGTGA.............................. 24 1 37.00 2.00 34.00 1.00 ...........................................................................TTGAGCAAAATTTCAGGTATGTGA.............................. 24 1 35.00 31.00 3.00 1.00 ...........................................................................TTGAGCAAAATTTCGGGTGTGTGA.............................. 24 1 35.00 6.00 25.00 4.00 ...........................................................................TTGAGCAAAATTTTAGGTGTGTGA.............................. 24 1 35.00 2.00 31.00 2.00 ...........................................................................TTGAGCAAAATTTCAGGGGTGTGA.............................. 24 1 33.00 12.00 13.00 8.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGG.............................. 24 1 31.00 6.00 21.00 4.00 ...........................................................................TTGAGCAAAATTTCAGGTTTGTGA.............................. 24 1 29.00 22.00 5.00 2.00 ..........................................................................CTTGAGCAAAATTTCAGGTGTGTGA.............................. 25 1 28.00 0.00 21.00 7.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTT............................... 23 1 26.00 16.00 2.00 8.00 ...........................................................................TTGAGCxxAATTTCAGGTGTGTG............................... 21 1 26.00 2.00 20.00 4.00 ...........................................................................TTGAGCAAAATTTCAGGTCTGT................................ 22 1 26.00 24.00 0.00 2.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGCGA.............................. 24 1 26.00 6.00 18.00 2.00 ...........................................................................TTGAGCAAAATTTCAGGTATGT................................ 22 1 24.00 23.00 0.00 1.00 ...........................................................................TTGAGCAAAATTTCCGGTGTGTGA.............................. 24 1 23.00 6.00 15.00 2.00 ............................................................................TGAGCAAAATTTCAGGTGTG................................. 20 1 21.00 5.00 2.00 14.00 ...........................................................................TTGAGCAAAATTTCAGGCGTGTG............................... 23 1 19.00 16.00 0.00 3.00 ...........................................................................TTGAGCAAAATTTCAGGTGCGTGA.............................. 24 1 19.00 2.00 9.00 8.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAG............................. 24 1 19.00 1.00 15.00 3.00 ...........................................................................TTGACCAAAATTTCAGGTGTGTGA.............................. 24 1 19.00 2.00 17.00 0.00 ...........................................................................TTGAGCAAAACTTCAGGTGTGTGA.............................. 24 1 18.00 4.00 12.00 2.00 ...........................................................................TTGAGCAAAATTTCGTGTGTGTGA.............................. 24 1 18.00 2.00 16.00 0.00 ...........................................................................TTGAGCAGAATTTCAGGTGTGTGA.............................. 24 1 18.00 2.00 15.00 1.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGC.............................. 24 1 18.00 7.00 3.00 8.00 ...........................................................................TTGAGCAAAATTTCTGGTGTGTGA.............................. 24 1 18.00 2.00 16.00 0.00 ...........................................................................TTGAGCAAAGTTTCAGGTGTGTGA.............................. 24 1 17.00 0.00 15.00 2.00 ...........................................................................TTGAGCAAAATTTCAGGTGCGT................................ 22 1 16.00 9.00 1.00 6.00 ...........................................................................TTGAGAAAAATTTCAGGTGTGTGA.............................. 24 1 16.00 3.00 10.00 3.00 .............................................................................GAGCAAAATTTCAGGTGTGTGA.............................. 22 1 16.00 5.00 8.00 3.00 ...........................................................................TTGAGCAAAATTTCAGGTxTGTGA.............................. 23 2 8.00 0.50 7.50 0.00 ...........................................................................TTGAGCGAAATTTCAGGTGTGTGA.............................. 24 1 15.00 3.00 9.00 3.00 ...........................................................................TTGAGCAAAATTTCAGGTTTGTG............................... 23 1 15.00 7.00 2.00 6.00 ...........................................................................TTGAGCAAAATTTCAGGTCTGTG............................... 23 1 15.00 10.00 5.00 0.00 ...........................................................................TTGGGCAAAATTTCAGGTGTGTGA.............................. 24 1 14.00 1.00 11.00 2.00 ...........................................................................TCGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 14.00 8.00 6.00 0.00 ...........................................................................TTGAGCAAAATTCCAGGTGTGTGA.............................. 24 1 14.00 3.00 10.00 1.00 ...........................................................................TTGAGCAAACTTTCAGGTGTGTGA.............................. 24 1 13.00 0.00 11.00 2.00 ...........................................................................TTGAGCAAAATTTCATGTGTGTGA.............................. 24 1 13.00 2.00 9.00 2.00 ...........................................................................TTGAGCAAAATTTCAGGTATGTG............................... 23 1 13.00 12.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGCGTGT................................ 22 1 13.00 11.00 0.00 2.00 ............................................................................TGAGCAAAATTTCAGGTGTGA................................ 21 1 13.00 2.00 9.00 2.00 ...........................................................................TTGAGCAAAATCTCAGGTGTGTGA.............................. 24 1 13.00 2.00 11.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTC............................... 23 1 12.00 3.00 4.00 5.00 ...........................................................................TTGAGCAAGATTTCAGGTGTGTGA.............................. 24 1 12.00 1.00 8.00 3.00 ...........................................................................TTGAGCAAAATTTAAGGTGTGTGA.............................. 24 1 12.00 3.00 7.00 2.00 ...........................................................................TTGAGCAAAATTTCAGGTTTGT................................ 22 1 12.00 11.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGC................................ 22 1 12.00 9.00 0.00 3.00 ............................................................................TGAGCxxAATTTCAGGTGTGTGA.............................. 21 1 12.00 0.00 11.00 1.00 ...........................................................................TTGAGCAGAATTTCAGGTGTGTG............................... 23 1 12.00 4.00 6.00 2.00 ...........................................................................TTGAGCAAAAxTTCAGGTGTGTGA.............................. 23 1 12.00 2.00 9.00 1.00 ...........................................................................TTGAGCAAAATTTCGGGTGTGTG............................... 23 1 12.00 2.00 8.00 2.00 ...........................................................................TTGAGCAAAATTTCAGTTGTGTGA.............................. 24 1 12.00 2.00 8.00 2.00 ...........................................................................TTGAGAAAAATTTCAGGTGTGTG............................... 23 1 11.00 2.00 1.00 8.00 ...........................................................................TTCAGCAAAATTTCAGGTGTGTGA.............................. 24 1 11.00 2.00 8.00 1.00 ...........................................................................TTGATCAAAATTTCAGGTGTGTGA.............................. 24 1 11.00 1.00 8.00 2.00 ...........................................................................TTGAGCxAAATTTCAGGTGTGTG............................... 22 1 11.00 1.00 8.00 2.00 ...........................................................................TTTAGCAAAATTTCAGGTGTGTGA.............................. 24 1 11.00 2.00 6.00 3.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAG............................. 25 1 11.00 1.00 9.00 1.00 ...........................................................................TTGAACAAAATTTCAGGTGTGTGA.............................. 24 1 11.00 4.00 7.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTTTGA.............................. 24 1 11.00 2.00 8.00 1.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAAA............................ 25 1 10.00 2.00 6.00 2.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTA............................... 23 1 10.00 4.00 4.00 2.00 ............................................................................TTAGCAAAATTTCAGGTGTGTGA.............................. 23 1 10.00 0.00 8.00 2.00 ...........................................................................TTGAGCAAAATTTCACGTGTGTGA.............................. 24 1 10.00 3.00 5.00 2.00 ...........................................................................TTGAGCAAAATTTCAxGTGTGTGA.............................. 23 2 5.00 0.50 4.50 0.00 ...........................................................................TTGAGCAAAATTTCAGATGTGTGA.............................. 24 1 10.00 4.00 6.00 0.00 ...........................................................................TTGAGCxxAATTTCAGGTGTGT................................ 20 1 10.00 5.00 1.00 4.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAAA............................ 26 1 10.00 2.00 7.00 1.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTTA.............................. 24 1 10.00 3.00 5.00 2.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGTT............................. 25 1 9.00 6.00 1.00 2.00 ...........................................................................TTGAGCAAAATTTCAGCTGTGTGA.............................. 24 1 9.00 3.00 5.00 1.00 ............................................................................TGAGTAAAATTTCAGGTGTGTGA.............................. 23 1 9.00 0.00 8.00 1.00 ...........................................................................TTGAGCAAAATTTCAGGTGTCTGA.............................. 24 1 9.00 2.00 7.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGGGTGTG............................... 23 1 9.00 7.00 0.00 2.00 ...........................................................................TTGAGTAAAATTTCAGGTGTGTG............................... 23 1 8.00 1.00 6.00 1.00 ...........................................................................TTGAGCAAAATTTCAGTTGTGTG............................... 23 1 8.00 2.00 2.00 4.00 ...........................................................................TTGAGCAAAATTTCCGGTGTGT................................ 22 1 8.00 6.00 0.00 2.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2L:12640967-12641095 -	88.53	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT TCCAAGTCCTTTGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACAATTATGGTCTTCGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGAGGATTT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...........................................................................TTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 6376.00 2419.00 159.00 3398.00 384.00 16.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTG............................... 23 1 1949.00 482.00 69.00 1254.00 134.00 10.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGT................................ 22 1 996.00 16.00 58.00 767.00 150.00 5.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGA.............................. 23 1 631.00 313.00 21.00 247.00 47.00 3.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGT.............................. 24 1 357.00 6.00 8.00 297.00 45.00 1.00 ...........................................................................TTGAGCAAAATTTCAGGTGTG................................. 21 1 150.00 13.00 5.00 109.00 17.00 6.00 ............................................................................TGAGCAAAATTTCAGGTGTGTG............................... 22 1 127.00 37.00 8.00 61.00 18.00 3.00 ...........................TCGCGCCTGTATCTTGCTGAACC............................................................................... 23 1 115.00 10.00 0.00 1.00 0.00 104.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAT............................. 25 1 66.00 1.00 4.00 47.00 12.00 2.00 ...........................TCGCGCCTGTATCTTGCTGAAC................................................................................ 22 1 62.00 2.00 0.00 1.00 0.00 59.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAA............................. 25 1 45.00 6.00 2.00 31.00 6.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGGGTGTGA.............................. 24 1 37.00 5.00 0.00 28.00 3.00 1.00 ...........................................................................TTGAGCAAAATTTCAGGTGT.................................. 20 1 36.00 0.00 3.00 30.00 3.00 0.00 ............................................................................TGAGCAAAATTTCAGGTGTGT................................ 21 1 34.00 1.00 4.00 23.00 5.00 1.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGT.............................. 23 1 31.00 2.00 4.00 19.00 6.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGCGTGA.............................. 24 1 23.00 5.00 0.00 18.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGC.............................. 24 1 17.00 7.00 0.00 3.00 7.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGCGTGTGA.............................. 24 1 16.00 2.00 1.00 9.00 4.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTTA.............................. 24 1 15.00 2.00 2.00 2.00 9.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGTT............................. 25 1 13.00 0.00 0.00 12.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTT............................... 23 1 12.00 1.00 3.00 6.00 2.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGCGA.............................. 24 1 12.00 5.00 0.00 5.00 2.00 0.00 ...........................................................................TTGGGCAAAATTTCAGGTGTGTGA.............................. 24 1 9.00 5.00 1.00 2.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGGGTGT................................ 22 1 9.00 0.00 1.00 7.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCCGGTGTGTGA.............................. 24 1 9.00 5.00 0.00 3.00 1.00 0.00 ...........................................................................CTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 8.00 4.00 1.00 3.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGCGTG............................... 23 1 8.00 3.00 0.00 5.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGG.............................. 24 1 8.00 3.00 0.00 0.00 2.00 3.00 ...........................................................................TTGAGCAAAATTTTAGGTGTGTGA.............................. 24 1 8.00 4.00 0.00 4.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTG................................... 19 1 8.00 0.00 0.00 1.00 0.00 7.00 ...........................................................................TTGAGCAAAATTTAAGGTGTGTGA.............................. 24 1 7.00 4.00 0.00 3.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGAGTGA.............................. 24 1 7.00 1.00 0.00 6.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGTTGTGTGA.............................. 24 1 7.00 1.00 0.00 1.00 5.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTTTGA.............................. 24 1 7.00 2.00 0.00 3.00 2.00 0.00 ...........................................................................TTGAGCGAAATTTCAGGTGTGTGA.............................. 24 1 6.00 2.00 0.00 3.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGCGTGTG............................... 23 1 6.00 6.00 0.00 0.00 0.00 0.00 ...........................................................................TTGAGCACAATTTCAGGTGTGTGA.............................. 24 1 6.00 1.00 0.00 4.00 1.00 0.00 ...........................................................................TTGAGCAAAGTTTCAGGTGTGTGA.............................. 24 1 6.00 3.00 0.00 2.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGGGTGTG............................... 23 1 6.00 0.00 1.00 4.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGATT............................ 26 1 5.00 0.00 0.00 5.00 0.00 0.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAT............................. 24 1 5.00 0.00 1.00 3.00 0.00 1.00 ...........................................................................TTGAGCAAAATTTCAGGTGTTTG............................... 23 1 5.00 0.00 1.00 1.00 3.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTCTGTGA.............................. 24 1 5.00 0.00 0.00 5.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCGGGTGTGTGA.............................. 24 1 5.00 1.00 0.00 4.00 0.00 0.00 ..........................................................................CTTGAGCAAAATTTCAGGTGTGTGA.............................. 25 1 5.00 3.00 0.00 1.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGCTGTGTG............................... 23 1 5.00 0.00 0.00 5.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCGTGTGTGTGA.............................. 24 1 5.00 0.00 0.00 5.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGCGTGT.............................. 24 1 5.00 1.00 0.00 4.00 0.00 0.00 ...........................................................................TTGAGCAAAATTCCAGGTGTGTGA.............................. 24 1 5.00 2.00 0.00 2.00 1.00 0.00 ...........................................................................TTGAACAAAATTTCAGGTGTGTGA.............................. 24 1 5.00 3.00 0.00 1.00 1.00 0.00 ...........................................................................TTGAGCAAAATCTCAGGTGTGTGA.............................. 24 1 5.00 2.00 1.00 0.00 2.00 0.00 ...........................................................................TGGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 4.00 2.00 0.00 0.00 2.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTATGTGA.............................. 24 1 4.00 2.00 0.00 1.00 1.00 0.00 ...........................................................................TTGAGCAAAGTTTCAGGTGTGTG............................... 23 1 4.00 1.00 0.00 1.00 2.00 0.00 ...........................................................................TTGAGTAAAATTTCAGGTGTGTGA.............................. 24 1 4.00 2.00 0.00 2.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGAGTGTGA.............................. 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAGATTTCAGGTGTGTGA.............................. 24 1 4.00 1.00 1.00 1.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGA................................ 22 1 4.00 0.00 0.00 2.00 2.00 0.00 ...........................................................................TTGAGCAAAATTTCAAGTGTGTGA.............................. 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ...........................................................................TTAAGCAAAATTTCAGGTGTGTGA.............................. 24 1 4.00 0.00 1.00 2.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTATGA.............................. 24 1 4.00 2.00 0.00 2.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGGGTG............................... 23 1 4.00 2.00 0.00 2.00 0.00 0.00 ...........................................................................TTGAGCxxAATTTCAGGTGTGTGA.............................. 22 1 4.00 0.00 0.00 4.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAAA............................ 26 1 4.00 0.00 0.00 3.00 1.00 0.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAA............................. 24 1 4.00 0.00 0.00 4.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCCGGTGTGTG............................... 23 1 4.00 2.00 0.00 2.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCTGGTGTGTGA.............................. 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ...........................................................................TTGAGCAACATTTCAGGTGTGTGA.............................. 24 1 3.00 1.00 0.00 1.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTTTGTGA.............................. 24 1 3.00 0.00 0.00 3.00 0.00 0.00 ............................................................................TGAGAAAAATTTCAGGTGTGTGA.............................. 23 1 3.00 2.00 1.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGCGT................................ 22 1 3.00 0.00 0.00 2.00 1.00 0.00 ...........................................................................TTGAGCAAACTTTCAGGTGTGTGA.............................. 24 1 3.00 0.00 0.00 1.00 2.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTAA.............................. 24 1 3.00 1.00 0.00 2.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGTTGTGTG............................... 23 1 3.00 0.00 0.00 2.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGCG............................... 23 1 3.00 0.00 0.00 2.00 1.00 0.00 ...........................TCTCGCCTGTATCTTGCTGAAC................................................................................ 22 1 3.00 0.00 0.00 0.00 0.00 3.00 ...........................................................................TCGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 3.00 1.00 0.00 1.00 1.00 0.00 ...........................................................................TTGAGCATAATTTCAGGTGTGTGA.............................. 24 1 3.00 3.00 0.00 0.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGCTGTGTGA.............................. 24 1 3.00 0.00 0.00 3.00 0.00 0.00 ............................................................................TGAGCAAAATTTCAGGTGTTTGA.............................. 23 1 3.00 1.00 1.00 1.00 0.00 0.00 ...........................................................................TTGAGCAACATTTCAGGTGTGTG............................... 23 1 3.00 1.00 0.00 1.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTATGTG............................... 23 1 3.00 0.00 1.00 1.00 1.00 0.00 ............................................................................TGAGCAAAATTTCAGGTG................................... 18 1 3.00 0.00 0.00 0.00 0.00 3.00 ............................................................................TGCGCAAAATTTCAGGTGTGTGA.............................. 23 1 3.00 2.00 0.00 1.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGGGTGA.............................. 24 1 3.00 0.00 0.00 3.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGC................................ 22 1 3.00 0.00 0.00 1.00 0.00 2.00 ...........................................................................TTTAGCAAAATTTCAGGTGTGTGA.............................. 24 1 3.00 0.00 0.00 3.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGGGTGT.............................. 24 1 3.00 0.00 0.00 3.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGATGTGT................................ 22 1 3.00 0.00 0.00 2.00 1.00 0.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAG............................. 25 1 3.00 1.00 0.00 2.00 0.00 0.00 ...........................................................................TTGAGCAAACTTTCAGGTGTGTG............................... 23 1 3.00 2.00 0.00 0.00 1.00 0.00 ...........................................................................TTGCGCAAAATTTCAGGTGTGTGA.............................. 24 1 3.00 0.00 0.00 3.00 0.00 0.00 ...........................................................................TTGAGCAAAATTTCAGATGTGTG............................... 23 1 3.00 0.00 0.00 0.00 3.00 0.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_4929:10570531-10570659 -	90.05	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT CACGAGTCCTTTGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTGCCATTATGGCCTACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGACGATTT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ...........................................................................TTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 12529.00 3094.00 346.00 0.00 9089.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTG............................... 23 1 5486.00 694.00 187.00 0.00 4605.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGT................................ 22 1 2415.00 54.00 133.00 0.00 2228.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGA.............................. 23 1 1831.00 535.00 61.00 0.00 1235.00 ...........................................................................TTGAGCAAAATTTCAGGTGTG................................. 21 1 789.00 25.00 42.00 0.00 722.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGT.............................. 24 1 735.00 13.00 18.00 0.00 704.00 ............................................................................TGAGCAAAATTTCAGGTGTGTG............................... 22 1 546.00 60.00 28.00 0.00 458.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTTA.............................. 24 1 193.00 67.00 2.00 0.00 124.00 ...........................................................................TTGAGCAAAATTTCATGTGTGTGA.............................. 24 1 124.00 25.00 1.00 0.00 98.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAT............................. 25 1 118.00 2.00 8.00 0.00 108.00 ...........................................................................TTTAGCAAAATTTCAGGTGTGTGA.............................. 24 1 109.00 7.00 0.00 0.00 102.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGT.............................. 23 1 94.00 7.00 2.00 0.00 85.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGAA............................. 25 1 85.00 6.00 3.00 0.00 76.00 ...........................................................................TTGATCAAAATTTCAGGTGTGTGA.............................. 24 1 78.00 6.00 0.00 0.00 72.00 ............................................................................TGAGCAAAATTTCAGGTGTGT................................ 21 1 78.00 1.00 3.00 0.00 74.00 ...........................................................................TTGAGCAAAATTTCAGGTGT.................................. 20 1 77.00 0.00 1.00 0.00 76.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTAA.............................. 24 1 75.00 2.00 1.00 0.00 72.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTT............................... 23 1 72.00 16.00 2.00 0.00 54.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTCA.............................. 24 1 71.00 3.00 1.00 0.00 67.00 ...........................................................................TTGAGCAAAATTTCAGTTGTGTGA.............................. 24 1 58.00 23.00 5.00 0.00 30.00 ...........................................................................TTGAGCAAAATTTCATGTGTGTG............................... 23 1 56.00 2.00 0.00 0.00 54.00 ...........................................................................TTGAGCAAAATTTCAGGTTTGTGA.............................. 24 1 55.00 18.00 0.00 0.00 37.00 ...........................................................................TTTAGCAAAATTTCAGGTGTGTG............................... 23 1 55.00 1.00 0.00 0.00 54.00 ...........................................................................TTGAGCAAAATTTCAGGCGTGTGA.............................. 24 1 45.00 17.00 1.00 0.00 27.00 ...........................................................................TTGATCAAAATTTCAGGTGTGTG............................... 23 1 43.00 3.00 0.00 0.00 40.00 ...........................................................................TTGAGCAAAATTTCAGGTGTTTGA.............................. 24 1 43.00 11.00 2.00 0.00 30.00 ...........................................................................TTGAGCAAAATTTCAGGGGTGTGA.............................. 24 1 41.00 13.00 1.00 0.00 27.00 ...........................................................................TTGAGAAAAATTTCAGGTGTGTGA.............................. 24 1 41.00 2.00 0.00 0.00 39.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTC............................... 23 1 38.00 0.00 0.00 0.00 38.00 ...........................................................................TTGAGCAAAATTTAAGGTGTGTGA.............................. 24 1 37.00 2.00 1.00 0.00 34.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAA............................. 24 1 34.00 3.00 3.00 0.00 28.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTA............................... 23 1 32.00 1.00 1.00 0.00 30.00 ...........................................................................TTGAGCAAAATTTCAGTTGTGTG............................... 23 1 31.00 5.00 4.00 0.00 22.00 ...........................TCGCGCCTGTATCTTGCTGAAC................................................................................ 22 1 31.00 5.00 1.00 0.00 25.00 ...........................TCGCGCCTGTATCTTGCTGAACC............................................................................... 23 1 30.00 8.00 1.00 0.00 21.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGC.............................. 24 1 29.00 11.00 4.00 0.00 14.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGA................................ 22 1 27.00 1.00 4.00 0.00 22.00 ...........................................................................TTGAGCAAAATTTCAGGGGTGTG............................... 23 1 26.00 5.00 1.00 0.00 20.00 ...........................................................................TTGAGCAAAATTTCAGGTGTTTG............................... 23 1 25.00 13.00 0.00 0.00 12.00 ...........................................................................TTGAGAAAAATTTCAGGTGTGTG............................... 23 1 23.00 1.00 0.00 0.00 22.00 ...........................................................................TTCAGCAAAATTTCAGGTGTGTGA.............................. 24 1 23.00 10.00 0.00 0.00 13.00 ...........................................................................TTGAGCAAAATTTCATGTGTGT................................ 22 1 23.00 0.00 1.00 0.00 22.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGG.............................. 24 1 23.00 11.00 1.00 0.00 11.00 ...........................................................................TTTAGCAAAATTTCAGGTGTGT................................ 22 1 22.00 0.00 0.00 0.00 22.00 ...........................................................................TTGAGCAAAATTTCAGGTGCGTGA.............................. 24 1 22.00 7.00 1.00 0.00 14.00 ............................................................................TGAGCAAAATTTCATGTGTGTGA.............................. 23 1 21.00 6.00 0.00 0.00 15.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGCGA.............................. 24 1 21.00 7.00 1.00 0.00 13.00 ...........................................................................TTGAGCAAAATTTCAGGTTTGTG............................... 23 1 21.00 7.00 0.00 0.00 14.00 ............................................................................TGAGCAAAATTTCAGGTGTG................................. 20 1 21.00 0.00 0.00 0.00 21.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGAT............................. 24 1 20.00 2.00 0.00 0.00 18.00 ...........................................................................TTGAGCAAAATTTCGGGTGTGTGA.............................. 24 1 20.00 6.00 0.00 0.00 14.00 ...........................................................................TTGAGCAAAATTTCAGGCGTGTG............................... 23 1 20.00 5.00 0.00 0.00 15.00 ..........................................................................CTTGAGCAAAATTTCAGGTGTGTGA.............................. 25 1 19.00 3.00 3.00 0.00 13.00 ...........................................................................CTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 18.00 9.00 0.00 0.00 9.00 ...........................................................................TTGAGCAAAATTTAAGGTGTGTG............................... 23 1 18.00 0.00 0.00 0.00 18.00 ............................................................................TGAGCAAAATTTCAGGTGTGTGC.............................. 23 1 17.00 3.00 0.00 0.00 14.00 ...........................................................................TTGAGCAAAATTTCCGGTGTGTGA.............................. 24 1 16.00 7.00 1.00 0.00 8.00 ............................................................................TGAGCAAAATTTCAGGTGTGTTA.............................. 23 1 16.00 8.00 0.00 0.00 8.00 ...........................................................................TTGAGCAAAATTTCAGGAGTGTGA.............................. 24 1 16.00 4.00 0.00 0.00 12.00 ...........................................................................TTGAGCAAAATTTCAGGGGTGT................................ 22 1 15.00 0.00 0.00 0.00 15.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTGTT............................. 25 1 15.00 0.00 0.00 0.00 15.00 ...........................................................................TTGAGCAAAATTCCAGGTGTGTGA.............................. 24 1 14.00 3.00 0.00 0.00 11.00 ...........................................................................TTGAGCAAAATTTCAGGTGTCTGA.............................. 24 1 14.00 9.00 0.00 0.00 5.00 ...........................................................................TTAAGCAAAATTTCAGGTGTGTGA.............................. 24 1 14.00 3.00 0.00 0.00 11.00 ...........................................................................TTGGGCAAAATTTCAGGTGTGTGA.............................. 24 1 13.00 4.00 1.00 0.00 8.00 ............................................................................TTAGCAAAATTTCAGGTGTGTGA.............................. 23 1 13.00 1.00 0.00 0.00 12.00 ...........................................................................TTGAGCAAAGTTTCAGGTGTGTGA.............................. 24 1 13.00 5.00 0.00 0.00 8.00 ...........................................................................TTGAGCxxAATTTCAGGTGTGTGA.............................. 22 1 13.00 0.00 0.00 0.00 13.00 ...........................................................................TTGACCAAAATTTCAGGTGTGTGA.............................. 24 1 13.00 2.00 1.00 0.00 10.00 ...........................................................................TTGAGCAGAATTTCAGGTGTGTGA.............................. 24 1 13.00 1.00 0.00 0.00 12.00 ...........................................................................TTGAGCAAAACTTCAGGTGTGTGA.............................. 24 1 12.00 4.00 1.00 0.00 7.00 ...........................................................................TCGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 12.00 5.00 0.00 0.00 7.00 ...........................................................................TTGAGCAAAATTTAAGGTGTGT................................ 22 1 12.00 0.00 0.00 0.00 12.00 ...........................................................................TTGAGCAAAATTTTAGGTGTGTGA.............................. 24 1 12.00 1.00 0.00 0.00 11.00 ...........................................................................TTGAGCAAAATTTCAGGTCTGTGA.............................. 24 1 12.00 6.00 0.00 0.00 6.00 ...........................................................................TTGAGCGAAATTTCAGGTGTGTGA.............................. 24 1 11.00 5.00 0.00 0.00 6.00 ...........................................................................TTGAGCAAAATTTCACGTGTGTGA.............................. 24 1 11.00 4.00 0.00 0.00 7.00 ...........................................................................TTGAGCAAACTTTCAGGTGTGTGA.............................. 24 1 11.00 6.00 0.00 0.00 5.00 ...........................................................................TTGAGAAAAATTTCAGGTGTGT................................ 22 1 11.00 1.00 1.00 0.00 9.00 ...........................................................................TTTAGCAAAATTTCAGGTGTGTGT.............................. 24 1 11.00 0.00 0.00 0.00 11.00 ...........................TCGCGCCTGTATCTTGCTGA.................................................................................. 20 1 11.00 0.00 2.00 0.00 9.00 ..........................................................................CTTGAGCAAAATTTCAGGTGTGT................................ 23 1 11.00 0.00 1.00 0.00 10.00 ...........................................................................TTGCGCAAAATTTCAGGTGTGTGA.............................. 24 1 11.00 5.00 0.00 0.00 6.00 ...........................................................................TTGAACAAAATTTCAGGTGTGTGA.............................. 24 1 10.00 4.00 0.00 0.00 6.00 ...........................................................................TTGAGCAAAATTTCAAGTGTGTGA.............................. 24 1 10.00 7.00 0.00 0.00 3.00 ...........................................................................TTGAGCAAAATCTCAGGTGTGTGA.............................. 24 1 10.00 2.00 0.00 0.00 8.00 ...........................................................................TTGAGCAAAATTTCATGTGTG................................. 21 1 9.00 0.00 1.00 0.00 8.00 ...........................................................................TTGAGCAAAATTTCAGGTATGTGA.............................. 24 1 9.00 3.00 0.00 0.00 6.00 ...........................................................................TTGAGCAAAATTTCAGCTGTGTGA.............................. 24 1 9.00 7.00 0.00 0.00 2.00 ............................................................................TGAGCAAAATTTCAGGTTTGTGA.............................. 23 1 9.00 2.00 0.00 0.00 7.00 ...........................................................................TTGAGCAAAATTTCAGGTGTCTG............................... 23 1 9.00 4.00 0.00 0.00 5.00 ............................................................................TTAGCAAAATTTCAGGTGTGTG............................... 22 1 9.00 0.00 0.00 0.00 9.00 ...........................................................................TTGGGCAAAATTTCAGGTGTGTG............................... 23 1 9.00 1.00 0.00 0.00 8.00 ...........................................................................TTGATCAAAATTTCAGGTGTGT................................ 22 1 9.00 0.00 0.00 0.00 9.00 ...........................................................................TTGAGCAAAATTTCTGGTGTGTGA.............................. 24 1 9.00 3.00 0.00 0.00 6.00 ...........................................................................TTGAGCAAAATTTCAGGTGTGTTT.............................. 24 1 8.00 0.00 0.00 0.00 8.00 ...........................................................................TTGAGCAAAATTTCAGTTGTGT................................ 22 1 8.00 0.00 0.00 0.00 8.00 ...........................................................................TTGAGCAAAATTTCAGGTTTGT................................ 22 1 8.00 2.00 1.00 0.00 5.00 ............................................................................TGAGCAAAATTTAAGGTGTGTGA.............................. 23 1 8.00 0.00 0.00 0.00 8.00 .............................................................................GAGCAAAATTTCAGGTGTGTGA.............................. 22 1 8.00 2.00 0.00 0.00 6.00 ............................................................................TGAGAAAAATTTCAGGTGTGTGA.............................. 23 1 8.00 0.00 0.00 0.00 8.00

droFic1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000449513:87-213 +	86.15	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTA-TGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT CAAAACTCCTTTGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTGCCAATATTGGCCTACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCAACTGTAAA--- Size Hit Count Total Norm
4	scf7180000453838:152056-152182 -	85.38	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCG-GAGAATTT CAAAACTCCTTTGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCAATATTGGCTACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCAACTGTAGAA--- Size Hit Count Total Norm
2	scf7180000449513:284-367 +	33.84	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGT-GTGAGAAATGTGTTTAGCATTCATCGGAGAATTT T--------------------------------------------GTAAAGCTGTCAGAAGTTCCAAAAATTTTGGAAAGAACTATATTGGATAACTCAAGAAAAACGATCACC--TAACTAGAGAGTTT Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000409554:4961907-4962035 +	85.48	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT TTTAAGTCCTTTAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCATATTGGCCCAAGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCGAAGGATTT Size Hit Count Total Norm

droBia1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000301468:52263-52391 -	83.19	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT CCAAAAATCCTAGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTGCCACTTTGGCCTACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCTTTCATCGAGGGATGA Size Hit Count Total Norm
1	scf7180000301468:51966-52010 -	18.9	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT ------------------------------------------------------------------------------------ATTATAGCAGACTAAAACATATACTTAGAACTTAACAGACGTTTA Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415667:562565-562692 +	78.45	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT TTACTTAAATTAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCACTTTGGCCTTCGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAACCATCGAGGGAT-T Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000491186:3003977-3004106 -	81.3	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGA--ATTT ---AGCTCCTTTGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTTACCATATTGGCCTTCGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCAAAAAAGTGT Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000779234:243647-243807 +	56.2	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATC--------------------------------GGAGAATTT T-ACAGTCCTTTGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCATATTGGCCATCGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCACGAAAGTGTTCTGGAAACGATATGGTACAAGGAGATCTT Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302677:173647-173776 +	79.66	CCAAAGTCCTTT-GGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT TTATAATCCTTCGGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCATTTGGGCCTACAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAATGGGTTT Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_12916:13789760-13789886 -	75.97	CCAAAGTCCTTT--GGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT TGA--ATCCTTTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCGATATGGCACAGAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAAAAGAT-- Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo .............................................................................TTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 6084.00 2367.00 2992.00 321.00 404.00 .............................................................................TTGAGCAAAATTTCAGGTGTGTG............................... 23 1 2860.00 1094.00 1496.00 123.00 147.00 .............................................................................TTGAGCAAAATTTCAGGTGTGT................................ 22 1 2068.00 898.00 980.00 186.00 4.00 .............................................................................TTGAGCAAAATTTCAGGTGTGTGT.............................. 24 1 615.00 252.00 331.00 27.00 5.00 ..............................................................................TGAGCAAAATTTCAGGTGTGTGA.............................. 23 1 592.00 126.00 389.00 29.00 48.00 .............................................................................TTGAGCAAAATTTCAGGTGTG................................. 21 1 496.00 170.00 292.00 30.00 4.00 ..............................................................................TGAGCAAAATTTCAGGTGTGTG............................... 22 1 260.00 56.00 178.00 12.00 14.00 .............................................................................TTGAGCAAAATTTCAGGTGT.................................. 20 1 119.00 39.00 68.00 9.00 3.00 ..............................................................................TGAGCAAAATTTCAGGTGTGT................................ 21 1 114.00 34.00 71.00 9.00 0.00 .............................................................................TTTAGCAAAATTTCAGGTGTGTGA.............................. 24 1 76.00 9.00 66.00 0.00 1.00 .............................................................................TTGAGCAAAATTTCAGGTGTATGA.............................. 24 1 53.00 28.00 25.00 0.00 0.00 ..............................................................................TGAGCAAAATTTCAGGTGTGTGT.............................. 23 1 52.00 14.00 32.00 6.00 0.00 .............................................................................TTGAGAAAAATTTCAGGTGTGTGA.............................. 24 1 45.00 14.00 31.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTGTGTTA.............................. 24 1 43.00 7.00 15.00 0.00 21.00 .............................................................................TTTAGCAAAATTTCAGGTGTGT................................ 22 1 35.00 5.00 30.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTGTGTGAA............................. 25 1 35.00 18.00 14.00 1.00 2.00 .............................................................................TTGAGCAAAATTTCATGTGTGTGA.............................. 24 1 33.00 8.00 18.00 0.00 7.00 .............................................................................TTGAGCAAAATTTCAGGTGTGTGAT............................. 25 1 32.00 14.00 13.00 3.00 2.00 .............................................................................TTTAGCAAAATTTCAGGTGTGTG............................... 23 1 31.00 4.00 26.00 0.00 1.00 .............................................................................TTGAGCAAAATTTCAGGTGTGTT............................... 23 1 30.00 10.00 13.00 2.00 5.00 .............................................................................TTGAGCAAAATTTCAGGTGTCTGA.............................. 24 1 28.00 18.00 10.00 0.00 0.00 .............................................................................TTGATCAAAATTTCAGGTGTGTGA.............................. 24 1 24.00 8.00 14.00 1.00 1.00 ..............................................................................TGAGCAAAATTTCAGGTGTG................................. 20 1 19.00 4.00 15.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTGTAT................................ 22 1 18.00 7.00 10.00 1.00 0.00 .............................................................................TTGAGCAAAATTTCATGTGTGTG............................... 23 1 18.00 5.00 12.00 0.00 1.00 .............................................................................TTGAGAAAAATTTCAGGTGTGTG............................... 23 1 18.00 6.00 12.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTGTATG............................... 23 1 17.00 8.00 8.00 0.00 1.00 .............................................................................TTGAGCAAAATTTCAGGTGTGTGG.............................. 24 1 16.00 7.00 6.00 0.00 3.00 .............................................................................TTGAGCAAAATTTCAGGTGTTTGA.............................. 24 1 16.00 4.00 8.00 0.00 4.00 .............................................................................TTGAGCAAAATTTCAGGTGTGTGC.............................. 24 1 16.00 9.00 2.00 4.00 1.00 .............................................................................TTGAGCxxAATTTCAGGTGTGTGA.............................. 22 1 15.00 6.00 9.00 0.00 0.00 ..............................................................................TGAGCAAAATTTCAGGTGTGTGAA............................. 24 1 15.00 9.00 6.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTGCGTGA.............................. 24 1 14.00 1.00 7.00 5.00 1.00 .............................................................................TTGAGAAAAATTTCAGGTGTGT................................ 22 1 14.00 4.00 7.00 3.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTGTGTGTT............................. 25 1 14.00 7.00 6.00 1.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTGTCT................................ 22 1 13.00 6.00 7.00 0.00 0.00 .............................................................................TTTAGCAAAATTTCAGGTGTGTGT.............................. 24 1 13.00 1.00 12.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAAGTGTGTGA.............................. 24 1 13.00 10.00 1.00 0.00 2.00 .............................................................................TTGAGCAAAATCTCAGGTGTGTGA.............................. 24 1 13.00 11.00 0.00 1.00 1.00 .............................................................................TTGAGCAAAATTTCAGGTGTTTG............................... 23 1 12.00 2.00 7.00 0.00 3.00 .............................................................................TTGAGCAAAATTTCACGTGTGTGA.............................. 24 1 12.00 9.00 1.00 0.00 2.00 .............................................................................TTGAGCAAAATTTCAGGTGTGA................................ 22 1 12.00 4.00 8.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGGCGTGTGA.............................. 24 1 12.00 2.00 4.00 0.00 6.00 .............................................................................TTGATCAAAATTTCAGGTGTGTG............................... 23 1 12.00 4.00 8.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCATGTGTGT................................ 22 1 11.00 4.00 7.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGTTGTGTGA.............................. 24 1 11.00 3.00 2.00 1.00 5.00 .............................................................................GTGAGCAAAGTTTCAGGTGTGT................................ 22 1 10.00 0.00 0.00 10.00 0.00 ..............................................................................TTAGCAAAATTTCAGGTGTGTGA.............................. 23 1 10.00 0.00 10.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGGGGTGTGA.............................. 24 1 10.00 3.00 3.00 1.00 3.00 .............................................................................TTGAGCAAAATTTCAGGTGTGCGA.............................. 24 1 10.00 3.00 6.00 0.00 1.00 .............................................................................TTGAGCAAAATATCAGGTGTGTGA.............................. 24 1 10.00 9.00 0.00 0.00 1.00 .............................................................................TTGAGCAAAATTCCAGGTGTGTGA.............................. 24 1 10.00 4.00 6.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTTTGTGA.............................. 24 1 9.00 2.00 6.00 1.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTGTATGT.............................. 24 1 9.00 3.00 6.00 0.00 0.00 .............................................................................TTGAGCAAAATTTAAGGTGTGTGA.............................. 24 1 9.00 4.00 4.00 1.00 0.00 .............................................................................TTGCGCAAAATTTCAGGTGTGTGA.............................. 24 1 9.00 8.00 0.00 1.00 0.00 .............................................................................TTGAGCGAAATTTCAGGTGTGTGA.............................. 24 1 8.00 5.00 3.00 0.00 0.00 .............................................................................TGGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 8.00 4.00 0.00 4.00 0.00 .............................................................................TTGAGCAAAAATTCAGGTGTGTGA.............................. 24 1 8.00 7.00 1.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGTTGTGTG............................... 23 1 8.00 2.00 2.00 1.00 3.00 .............................................................................TTGAGAAAAATTTCAGGTGTGTGT.............................. 24 1 8.00 2.00 6.00 0.00 0.00 .............................................................................TCGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 8.00 5.00 3.00 0.00 0.00 .............................................................................TTGAGAAAAATTTCAGGTGTG................................. 21 1 8.00 3.00 5.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTGTCTG............................... 23 1 8.00 5.00 3.00 0.00 0.00 .............................................................................TTGAGCAAAATTACAGGTGTGTGA.............................. 24 1 8.00 8.00 0.00 0.00 0.00 .............................TCGCGCCTGTATCTTGCTGAAC................................................................................ 22 1 7.00 1.00 2.00 4.00 0.00 .............................................................................TTGAGCAAAATATCAGGTGTGT................................ 22 1 7.00 7.00 0.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCCGGTGTGTGA.............................. 24 1 7.00 1.00 3.00 1.00 2.00 .............................................................................TTTAGCAAAATTTCAGGTGTGTT............................... 23 1 6.00 1.00 5.00 0.00 0.00 .............................................................................TTGGGCAAAATTTCAGGTGTGTGA.............................. 24 1 6.00 0.00 3.00 1.00 2.00 .............................................................................TTCAGCAAAATTTCAGGTGTGTGA.............................. 24 1 6.00 1.00 4.00 1.00 0.00 .............................................................................TTGAGCGAAATTTCAGGTGTGT................................ 22 1 6.00 4.00 1.00 1.00 0.00 .............................................................................TTGAGCAAAATTTCGGGTGTGTGA.............................. 24 1 6.00 3.00 2.00 0.00 1.00 .............................................................................TTGAGCAAAATTACAGGTGTGTG............................... 23 1 6.00 6.00 0.00 0.00 0.00 .............................................................................TGGAGCAAAATTTCAGGTGTGTG............................... 23 1 6.00 5.00 1.00 0.00 0.00 .............................................................................TTAAGCAAAATTTCAGGTGTGT................................ 22 1 6.00 3.00 2.00 1.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTGCGTG............................... 23 1 6.00 4.00 1.00 0.00 1.00 .............................................................................TTGAGCAAAATTTAAGGTGTGT................................ 22 1 6.00 0.00 5.00 1.00 0.00 .............................................................................TTGATCAAAATTTCAGGTGTGT................................ 22 1 6.00 4.00 2.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTTTGTG............................... 23 1 6.00 1.00 4.00 0.00 1.00 .............................................................................TTGAGCAAAATTTCAGGCGTGT................................ 22 1 6.00 2.00 1.00 2.00 1.00 .............................................................................CTGAGCAAAATTTCAGGTGTGT................................ 22 1 6.00 3.00 2.00 1.00 0.00 .............................................................................TAGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 6.00 5.00 0.00 1.00 0.00 .............................................................................TTGAGCAAAACTTCAGGTGTGTGA.............................. 24 1 5.00 3.00 1.00 0.00 1.00 ..............................................................................TTAGCAAAATTTCAGGTGTGTG............................... 22 1 5.00 1.00 4.00 0.00 0.00 .............................................................................TTGAGCAACATTTCAGGTGTGTGA.............................. 24 1 5.00 3.00 0.00 0.00 2.00 .............................................................................TTGAGCAAAATTTCAGGTCTGTGA.............................. 24 1 5.00 0.00 2.00 3.00 0.00 .............................................................................TTGAGCAAAATATCAGGTGTGTG............................... 23 1 5.00 5.00 0.00 0.00 0.00 .............................................................................TTGAGCAAGATTTCAGGTGTGTG............................... 23 1 5.00 2.00 2.00 1.00 0.00 .............................................................................TTGAGCAAAATTTCAAGTGTGT................................ 22 1 5.00 4.00 1.00 0.00 0.00 .............................................................................TTGAGCAAAACTTCAGGTGTGTG............................... 23 1 5.00 3.00 2.00 0.00 0.00 .............................................................................TTGAGCAAAATTTCAGGTTTGT................................ 22 1 5.00 0.00 5.00 0.00 0.00 .............................................................................TTGAGCAAAGTTTCAGGTGTGTGA.............................. 24 1 5.00 3.00 2.00 0.00 0.00 .............................................................................TTGAGCAAAATTCCAGGTGTGTG............................... 23 1 5.00 3.00 1.00 0.00 1.00 .............................................................................TTTAGCAAAATTTCAGGTGTG................................. 21 1 5.00 0.00 5.00 0.00 0.00 .............................................................................TCGAGCAAAATTTCAGGTGTGT................................ 22 1 5.00 1.00 1.00 3.00 0.00 .............................................................................TTTAGCAAAATTTCAGGTGTGTTA.............................. 24 1 5.00 0.00 4.00 0.00 1.00 ..............................................................................TGAGCAAAATTTCAGGTGTGTT............................... 22 1 5.00 0.00 5.00 0.00 0.00 .............................................................................TTGAACAAAATTTCAGGTGTGTG............................... 23 1 5.00 2.00 2.00 1.00 0.00 ..............................................................................TGAGCAAAATTTCAGGTGT.................................. 19 1 5.00 1.00 3.00 1.00 0.00 .............................................................................TTGAGCAAAATTTCGGGTGTGT................................ 22 1 5.00 1.00 4.00 0.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396535:753813-753942 -	78.45	CCAA-AGTCCTTT--GGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT TGAAGAATCCTTTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCAATGTGGCACACAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCATCAAATGAT-- Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr4_group3:220105-220226 +	70.94	CCAAAGTCCTTTGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATTATGGCCAACGATC-CGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTT TCCTAC-CGTGTGCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTAGCCATAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAC------- Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ............................................................................TTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 5928.00 2413.00 2998.00 517.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGT................................ 22 1 1866.00 1490.00 140.00 235.00 1.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTG............................... 23 1 1742.00 993.00 536.00 213.00 0.00 .............................................................................TGAGCAAAATTTCAGGTGTGTGA.............................. 23 1 1054.00 390.00 571.00 93.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTG................................. 21 1 737.00 498.00 133.00 104.00 2.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTGT.............................. 24 1 200.00 148.00 30.00 22.00 0.00 .............................................................................TGAGCAAAATTTCAGGTGTGTG............................... 22 1 200.00 121.00 49.00 30.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGT.................................. 20 1 148.00 127.00 10.00 11.00 0.00 .............................................................................TGAGCAAAATTTCAGGTGTGT................................ 21 1 102.00 79.00 2.00 20.00 1.00 .............................................................................TGAGCAAAATTTCAGGTGTGTGT.............................. 23 1 40.00 34.00 2.00 4.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTGAA............................. 25 1 27.00 16.00 10.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTT............................... 23 1 23.00 21.00 1.00 0.00 1.00 ............................................................................TTGAGCAAAATTTCAGGGGTGTGA.............................. 24 1 20.00 4.00 16.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGCGTGTGA.............................. 24 1 19.00 3.00 16.00 0.00 0.00 ............................................................................TGGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 17.00 0.00 12.00 5.00 0.00 .............................................................................TGAGCAAAATTTCAGGTGTG................................. 20 1 17.00 12.00 1.00 4.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTGC.............................. 24 1 17.00 3.00 11.00 3.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTGG.............................. 24 1 14.00 6.00 8.00 0.00 0.00 .............................................................................TGAGCAAAATTTCAGGTGTGTGAA............................. 24 1 14.00 7.00 4.00 3.00 0.00 ............................................................................TTGAGCAAAATTTCAGGAGTGTGA.............................. 24 1 13.00 1.00 12.00 0.00 0.00 ............................................................................TTGAGCAAAGTTTCAGGTGTGTGA.............................. 24 1 13.00 3.00 10.00 0.00 0.00 ............................................................................TTGAGCAAACTTTCAGGTGTGTGA.............................. 24 1 12.00 3.00 8.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGCGTGA.............................. 24 1 12.00 3.00 9.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTGAT............................. 25 1 12.00 8.00 3.00 1.00 0.00 ...........................TCGCGCCTGTATCTTGCTGAAC................................................................................. 22 1 12.00 5.00 3.00 3.00 1.00 ...........................................................................CTTGAGCAAAATTTCAGGTGTGTGA.............................. 25 1 11.00 4.00 7.00 0.00 0.00 ............................................................................CTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 10.00 0.00 10.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCGGGTGTGTGA.............................. 24 1 10.00 2.00 6.00 2.00 0.00 ............................................................................TTGAGCAAGATTTCAGGTGTGTGA.............................. 24 1 10.00 5.00 3.00 2.00 0.00 ............................................................................TTGAGAAAAATTTCAGGTGTGTGA.............................. 24 1 10.00 1.00 9.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGA................................ 22 1 10.00 9.00 1.00 0.00 0.00 ............................................................................TTGGGCAAAATTTCAGGTGTGTGA.............................. 24 1 9.00 5.00 3.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTTA.............................. 24 1 9.00 0.00 7.00 2.00 0.00 ............................................................................TTGAGCAAAATCTCAGGTGTGTGA.............................. 24 1 9.00 2.00 6.00 1.00 0.00 .............................................................................TGAGAAAAATTTCAGGTGTGTGA.............................. 23 1 8.00 0.00 7.00 1.00 0.00 ............................................................................TTGAGCAAAATTTAAGGTGTGTGA.............................. 24 1 8.00 2.00 5.00 1.00 0.00 ...........................TCGCGCCTGTATCTTGCTGAACC................................................................................ 23 1 8.00 0.00 7.00 1.00 0.00 ............................................................................TTGAGCGAAATTTCAGGTGTGTGA.............................. 24 1 7.00 2.00 4.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCAGCTGTGTGA.............................. 24 1 7.00 3.00 3.00 1.00 0.00 ............................................................................TTGAGCxAAATTTCAGGTGTGTGA.............................. 23 1 7.00 7.00 0.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCCGGTGTGTGA.............................. 24 1 6.00 1.00 4.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGCGTG............................... 23 1 6.00 3.00 3.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGCGA.............................. 24 1 6.00 4.00 1.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCAGGGGTGTG............................... 23 1 6.00 0.00 4.00 2.00 0.00 ............................................................................TTGAGCAAAATTTCAGGCGTGT................................ 22 1 6.00 4.00 1.00 1.00 0.00 ............................................................................TTGAGCAAAATTCCAGGTGTGTGA.............................. 24 1 6.00 2.00 4.00 0.00 0.00 ............................................................................TTGCGCAAAATTTCAGGTGTGTGA.............................. 24 1 6.00 1.00 4.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCAGGCGTGTG............................... 23 1 5.00 2.00 2.00 1.00 0.00 .............................................................................TGAGCAAAATTTCAGGTGTGTGAT............................. 24 1 5.00 3.00 1.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCATGTGTGTGA.............................. 24 1 5.00 2.00 3.00 0.00 0.00 ............................................................................TTGAGCACAATTTCAGGTGTGTGA.............................. 24 1 5.00 0.00 5.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGGGTGA.............................. 24 1 5.00 0.00 5.00 0.00 0.00 ............................................................................TTGAGCAAAATTTTAGGTGTGTGA.............................. 24 1 5.00 1.00 3.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTTTGA.............................. 24 1 5.00 1.00 4.00 0.00 0.00 .............................................................................TGAGCAAAATTTCAGGTGTGTGAG............................. 24 1 5.00 0.00 4.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCTGGTGTGTGA.............................. 24 1 5.00 0.00 5.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTCT................................ 22 1 4.00 4.00 0.00 0.00 0.00 ............................................................................TTGAGCAACATTTCAGGTGTGTGA.............................. 24 1 4.00 1.00 3.00 0.00 0.00 ............................................................................TTCAGCAAAATTTCAGGTGTGTGA.............................. 24 1 4.00 1.00 1.00 2.00 0.00 ............................................................................TTGAGCAAAAGTTCAGGTGTGTGA.............................. 24 1 4.00 0.00 4.00 0.00 0.00 ............................................................................TTGAGCCAAATTTCAGGTGTGTGA.............................. 24 1 4.00 1.00 3.00 0.00 0.00 ............................................................................TTAAGCAAAATTTCAGGTGTGT................................ 22 1 4.00 1.00 1.00 2.00 0.00 ............................................................................TTGAGCTAAATTTCAGGTGTGTGA.............................. 24 1 4.00 0.00 4.00 0.00 0.00 ............................................................................TTAAGCAAAATTTCAGGTGTGTGA.............................. 24 1 4.00 0.00 4.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTATGA.............................. 24 1 4.00 0.00 3.00 1.00 0.00 ...........................................................................GTTGAGCAAAATTTCAGGTGTGTG............................... 24 1 4.00 1.00 3.00 0.00 0.00 .............................................................................TGAGCAAAATTTCAGGGGTGTGA.............................. 23 1 4.00 0.00 4.00 0.00 0.00 ............................................................................TTGAGCAAAATTTGAGGTGTGTGA.............................. 24 1 4.00 2.00 2.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTGAG............................. 25 1 4.00 2.00 2.00 0.00 0.00 ...........................................................................CTTGAGCAAAATTTCAGGTGTGT................................ 23 1 4.00 2.00 0.00 2.00 0.00 ............................................................................TTGAGCAGAATTTCAGGTGTGTGA.............................. 24 1 4.00 0.00 4.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGTTGTGTGA.............................. 24 1 4.00 2.00 2.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGGGA.............................. 24 1 4.00 2.00 2.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTAA.............................. 24 1 3.00 1.00 2.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTTTG............................... 23 1 3.00 1.00 2.00 0.00 0.00 ............................................................................TTGAGCxxAATTTCAGGTGTGTG............................... 21 1 3.00 3.00 0.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTA............................... 23 1 3.00 2.00 1.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGCG............................... 23 1 3.00 2.00 1.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGTGTGTT............................. 25 1 3.00 3.00 0.00 0.00 0.00 .............................................................................TGAGCAAAATTTCAGGCGTGTGA.............................. 23 1 3.00 0.00 2.00 1.00 0.00 .............................................................................TGAGCAAAATTTCAGGTGTGTGC.............................. 23 1 3.00 1.00 0.00 2.00 0.00 ............................................................................TCGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 3.00 1.00 2.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGGGTGT................................ 22 1 3.00 2.00 1.00 0.00 0.00 ............................................................................TTGAGCAAGATTTCAGGTGTGTG............................... 23 1 3.00 0.00 2.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCAGCTGTGTG............................... 23 1 3.00 2.00 0.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCAGTTGTGT................................ 22 1 3.00 3.00 0.00 0.00 0.00 ............................................................................ATGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 3.00 1.00 2.00 0.00 0.00 ............................................................................TTGAGCGAAATTTCAGGTGTGTG............................... 23 1 3.00 0.00 2.00 1.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTGGGTGG.............................. 24 1 3.00 0.00 2.00 1.00 0.00 ............................................................................TTGAGCAAACTTTCAGGCGTGTGA.............................. 24 1 3.00 0.00 3.00 0.00 0.00 ............................................................................TGGAGCAAAATTTCAGGTGTGTGT.............................. 24 1 3.00 0.00 2.00 1.00 0.00 ............................................................................TTGATCAAAATTTCAGGTGTGT................................ 22 1 3.00 2.00 0.00 1.00 0.00 .............................................................................TAAGCAAAATTTCAGGTGTGTGA.............................. 23 1 3.00 1.00 2.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGATGTGTGA.............................. 24 1 3.00 0.00 3.00 0.00 0.00 ............................................................................TTGAGCAAAATCTCAGGTGTGTG............................... 23 1 3.00 2.00 1.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCAGGTTTGTG............................... 23 1 3.00 1.00 2.00 0.00 0.00 ..............................................................................GAGCAAAATTTCAGGTGTGTGA.............................. 22 1 3.00 2.00 1.00 0.00 0.00 ............................................................................TTGAGCAAAATTTCGTGTGTGTGA.............................. 24 1 3.00 3.00 0.00 0.00 0.00 .............................................................................TGAGCAAAATTTCAGGTGT.................................. 19 1 3.00 1.00 0.00 2.00 0.00 ............................................................................GTGAGCAAAATTTCAGGTGTGTGA.............................. 24 1 3.00 0.00 2.00 1.00 0.00 .............................................................................TGAGCAAAATTTCAGGTGCGTGA.............................. 23 1 3.00 0.00 2.00 1.00 0.00

droPer1 - 1 hit found