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View alignment of MAF (12-files) vs LASTZ top hits (20-flies)

View all possible LASTZ hits (20-flies)

dme-mir-4969

chr3R:17624235-17624393 -

Known_mirbase

[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}]

intron


Legend:

   mature strand at position 17624350-17624373
   star strand at position 17624257-17624278
   mutations
   read mismatches

Notes: droTak1 has only the miR region of the sequence missing; the other regions look very confident


20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF


Species Coordinate Source Confidence Alignment
dm3 chr3R:17624220-17624408 - 1 TATATATATGTTTTTGTATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCT---------GCCATTGTTTGGTT-GATAAGGGAGCCTGGCGC----------------------------------------------------------------------ACTATTACCTGGCTCTCTG----------------------------------AAACGAGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCGAT---GCGAC-------------------------ATCATCATAATAATCATCGCCTTT
droSim1 chr3R:17429869-17430050 - LASTZ 1 TGTTTT--------TGTATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCA---------GCCATTGTTTGGTT-GATAAGGGAGCCTGGCGC----------------------------------------------------------------------ACTATTACCTGGCTCTCTG----------------------------------AAACGAGAGCCCA---------------------CCTGTAAATCAATACCACCCCGCCGAA---GCGAC-------------------------ATCATCATAATAATCATCGCCTGC
droSec1 super_0:17996591-17996767 - LASTZ 1 TATATATATGTTTTTATATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCA---------GCCATTGTTTGGTT-GATAAGGAAGCCTGGCGC----------------------------------------------------------------------ACTATTACCTGGCTCTCTG----------------------------------AAACGAGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCGAA---GCGAC-------------------------A------------TCATCGCCTTT
droYak2 chr3R:18444204-18444378 - LASTZ 1 ---------------GTATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCA---------GCCATTGTTTGGCT-GATAAGGGAGCCTGGCGC----------------------------------------------------------------------ACTATTACCTGGCCCTCTG----------------------------------AAACGAGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCGAA---CCGAC-------------------------ATCATCATAATAATCATCGCCAGC
droEre2 scaffold_4820:10462895-10463063 + LASTZ 1 T--------------GTATGAATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCA---------GCCATTGTTTGGCT-GATAAGGGAGCCTGGCGC----------------------------------------------------------------------ACTATTACCTGGCCCTGTG----------------------------------AAACGAGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCGAA---CCGAC-------------------------ATCATCATAGTAATCAT-------
droEug1 scf7180000409490:922102-922283 - LASTZ 5 T-------------TGTATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCC--------TGCTATTGTTCGGTT-GATAAGGGAGCCTGGC-----------------------------------------------------------------------AACTATTACCTGGCGC--TG----------------------------------AAACGGGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCG---------CATCAACATCATCGAACCACACCGACATCATCATAATA------------
droBia1 scf7180000302402:6490942-6491130 + LASTZ 5 TTTATT--------TGTATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCC--------TGCCATTGTTCGGCC-GATAAGGGAGCCTGCC-----------------------------------------------------------------------AACTATTACCTGGCGC--TG----------------------------------AAACGGGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCG---------CATCAGCA----------GCAACGACACCATCATAATAATCACCGTCATC
droTak1 scf7180000415711:1522484-1522611 + LASTZ 5 T-------------TGTATGGATTTTTCGGCGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCATTGTTCGGCT-GATAAGGGAGCCTGGC-----------------------------------------------------------------------AACTATTACCTGGCGC--TG----------------------------------AAACGGGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCG---------CATCA-------------------------GCATCAACATCACCG-----
droEle1 scf7180000491212:2052035-2052195 - LASTZ 5 AT---ATATATTTTTGTATGGATTATTCGGCGTGGC-----------------AGTAAATTGAATGA------------------------------------------CGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCT---------GCCATTGTTCGCCT-GATAAGGGAGCCGGGCCA----------------------------------------------------------------------ACTATTACCTGGCGCGCTG----------------------------------AAACGGGAGCCCA---------------------CCTGTCAATCAATACCACACCGCCG---------CATCA---------------------------------------------
droRho1 scf7180000767859:662-810 + LASTZ 5 TT------------TGTATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------CGAGCGGG----------------AG--------------------------------------------------------------------------------------------------GATATCGCT---------GCCATTGTTCGGCT-GATAAGGGAGCCGGGC-----------------------------------------------------------------------AACTATTACCTGGCGC--TG----------------------------------AAACGGGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCG---------CATCA---------------------------------------------
droFic1 scf7180000454106:760656-760852 - LASTZ 0 C-------------TGTATGGATTTTTCGGCGTGGC-------GT--------GGTAAATTGAATGATGAGTGGGTA--------------------------------TG--GGAGTGGGAGTGGCAGTGGGGG--------------------------------------------------------------------------------------------------GATGTCGCA---------GCCATTGTTCGGCT-GATAAGGGAGCCGGGC-------------------------------------------------------------------AGGCAACTATTACCTGCCGC--TG----------------------------------GAACGGGAGTCCG---------------------CCTGTCAATCAATACCACCCCGCGG---------CATCA-------------------------TCGCACC-GACATCATCGTC
droKik1 scf7180000302344:1257937-1258077 - LASTZ 0 TATATATATACTAATGTATATA--------TTTA--------------------------------G------------------------------------------CCAACAGG----------------GGGTTAACTTTCTTAT-------CGATGG-TTTTCGAGCATTTAAAA-----------------------------------------------------TTGGTTGCT-----------GATTGCTGTCTT-CAAAATAAAGCCCAGCTT----------------------------------------------------------------------AGGTTTAACTTGGTCTAAG------------------------------------------AGCCA-----------------------------------------------------------------------------------------------------CCCT
droAna3 scaffold_13417:705028-705198 + LASTZ 0 TGTATATGT--------GTGGGTGTAGAGGTGTGTA-----------------GGTGTGCAGGTGTA------------------------------------------CGGTTGTG----------------TG--------------------------------------------------------------------------------------------------TGTGTGGCATTCGTTGCTACTTATGTTT----AAGCTTCGTATTTAAG-------------------------------------------------------------------------------------------------------CTTTTTGCACGATTTCCTCTAACAAATGGATTTTCA---------------------CTTGTTG----------CCCAGCCAGACGAACGAA-------------------------GCCATCACAAAAAT----------
droBip1 scf7180000396708:224669-224886 + LASTZ 0 TT-----------------------CTCGGCGGGATACGGCCTCT--------CGTAAATTGAATGA------------------------------------------TGAGCAGA----------------AGGGTGGGGTTTGGGT-------GGGTGGACGGTCTGGCATGACAAT-----------------------------------------------------GATGTCGCC--------TGCCATTGTTTGGGA-GATAAGGGACCCAGGGTC-----------------------------------------------------------------TGGGAACTATTACCTGGTCGGGTG-----------------------------GGGAGAAACGAGATCCTG--------GCGGAGTCGGGAGCCTGTCAATCAATGGGATGCCACC------------------------------------------------GCCGCCGCCAGT
dp4 chr4_group3:1192892-1193069 - LASTZ 0 TATATG--------------GCCTATCCAGCAGGAA-------TTTATCCAGCG--------GATGGTAGCTAGAGA--------------------------------TG--CAGTTGG-------------AG--------------------------------------------------------------------------------------------------GGGGGC------------ACCATAGTTTGGAG-TAGCCAAATGCCAGGCGA-----------------------------------------------------------TAAGG------CATGAAA------AA--TA----------------------------------CAACTAATAAACATAAACCAG-------------TCTTCTTTTAAAAGCTGCT---------------C-------------------------ATCATCATCATCATCATGATCATC
droPer1 super_7:2291330-2291534 - LASTZ 0 CATAAAAGGGTCTGAGTATC--------TGAG--------------------------------CGT----------CTGGGTGGAACCTC---TGTG----------CTG--CTAA----------------TG---------------------------------------------TTAGCTGATCCCTCTCCTCCCTCCCACTCGGTCCCTGCCCCC----------------------------------------GCT-C-CCTTGGTGGCTGTTGC----------------------------------------------------------------------ACTTTCCCCCGGGGCTCTGGAGTGTGCACACTTTTGGCATAATA----CAACAAAATTGATT---------------------------------------------TGCAG--------CA-------------------------TGCATCATTATCAACATCGTCGTT
droWil1 scaffold_181089:335812-335995 + LASTZ 0 TTTTTTGAAATGTTTGTA--------AATGTGTGTG-----------------TGTTTGTGTGTGAA------------------------------------------GAAGAAT--------------G--TG-------------TGTATGTG------------------------CTGACTAGTT----------------------------CAATAATGCCCAGAGAATGTTA-------------------------------------------C----------------------------------------------------------------------AAGTTTAATGGAAGTTTTCA---------------------------------AATAGAAAAGCTA---------------------AAAGGAATTTAATTTTAGACATCAGTT---TCGAA-----------------GC------ATCGGCATCACAATCATCCCCATT
droVir3 scaffold_12963:15197471-15197651 + LASTZ 0 TATATATATAGATATATATATA--------TATATA-----------------TGCT--GGGTTATA-----------------------------------------TGA--CTTT---------------------------------------------------------------------------------------------------------------------TGG-----------------------GTGCT-GATAAGAGG--CGTTCAG---------------CTCA-------GTGCCAGAGCCCAGCGGCTAATTGACAGCCCCACGGGCCATG--CGGTTAA------AT--TA----------------------------------AAACGAAAAATCA---------------------TTTGCCAGC-AGCA-------------------AC------AGCAGCA-GCAGCAGCGGCAGCAGC-----------------A
droMoj3 scaffold_6496:7093711-7093898 - LASTZ 0 TAGCAACTCGTTTCTGTTGC--------TGTA-------------------------TGTGTAGCTG-----------------TAGCTGTATCTGTAGCTGTATCTG-TGGCTGT--------------A--TC-------------TGTATCTG------------------------GCAGCTGG------------------------------CAGCAGTAGCTGGTAGCTGCTG---------CTGGCTCT-------------------------------------------------------------------------------------------------GTTGCTGCCAGAGTATCTG---------TATCTGTGGCGCGTCA----T----------------------------------------TGTTGT----------------GCG---TTGCC-------------------------GTTGCCATCGTAACCAACGCCGTC
droGri2 scaffold_15126:1496468-1496644 - LASTZ 0 TACATCCACATCGCTGCT--------TCGGCTTATG-------------TTGTGGTAAGTCATTAGA------------------------------------------TG--CAGA----------------TG--------------------------------------------------------------------------------------------------ATTGGCGTC---------ATCATCGCCTGCTTCCACATCATAGTCAAGGGTATTCTTTTCTGCCGTCTCAATGAGCG---CTAGCG-------------------C---------------CGATGAG-------------------------------ATATCA----A----------------------------------------CGA--------GGTGCT---------------C-------------------------TTCATCATCATCATCATCGTCATC

Legend

0- The ortholog is absent. A better synthenic sequence candidate could not be found.
1- Reads w/ good pileup on mature and star strand & folds into hairpin structure.
2- Reads w/ good pileup on mature and star strand BUT does not fold into hairpin structure.
3- Sporadic reads & folds into a hairpin structure.
4- No reads but folds into a hairpin structure.
5- Ortholog is confident but miRNA appears absent (no reads and does not fold into a hairpin)

Re-alignment after removal of non-confident orthologs

Species Alignment
dm3 TATATATATGTTTTTGTATGGATTTTTCGGCGTGGCGGTAAATTGAATGATGAGTGGGAGGATGTCGC-TGCCATTGTTTGGTTGATAAGGGAGCCTGGCGCACTATTACCTGGCTCTCTGAAACGAGAGCCCACCTGTCAATCAATACCACCCCGCCGAT---------GCGAC-----------ATCATCATAATAATCATCGCCTTT
droSim1 T--------GTTTTTGTATGGATTTTTCGGCGTGGCGGTAAATTGAATGATGAGTGGGAGGATGTCGC-AGCCATTGTTTGGTTGATAAGGGAGCCTGGCGCACTATTACCTGGCTCTCTGAAACGAGAGCCCACCTGTAAATCAATACCACCCCGCCGAA---------GCGAC-----------ATCATCATAATAATCATCGCCTGC
droSec1 TATATATATGTTTTTATATGGATTTTTCGGCGTGGCGGTAAATTGAATGATGAGTGGGAGGATGTCGC-AGCCATTGTTTGGTTGATAAGGAAGCCTGGCGCACTATTACCTGGCTCTCTGAAACGAGAGCCCACCTGTCAATCAATACCACCCCGCCGAA---------GCGAC-----------ATC------------ATCGCCTTT
droYak2 ---------------GTATGGATTTTTCGGCGTGGCGGTAAATTGAATGATGAGTGGGAGGATGTCGC-AGCCATTGTTTGGCTGATAAGGGAGCCTGGCGCACTATTACCTGGCCCTCTGAAACGAGAGCCCACCTGTCAATCAATACCACCCCGCCGAA---------CCGAC-----------ATCATCATAATAATCATCGCCAGC
droEre2 T--------------GTATGAATTTTTCGGCGTGGCGGTAAATTGAATGATGAGTGGGAGGATGTCGC-AGCCATTGTTTGGCTGATAAGGGAGCCTGGCGCACTATTACCTGGCCCTGTGAAACGAGAGCCCACCTGTCAATCAATACCACCCCGCCGAA---------CCGAC-----------ATCATCATAGTAATCAT-------
droEug1 T-------------TGTATGGATTTTTCGGCGTGGCGGTAAATTGAATGATGAGTGGGAGGATGTCGCCTGCTATTGTTCGGTTGATAAGGGAGCCTGGCA-ACTATTACCTGGCGC--TGAAACGGGAGCCCACCTGTCAATCAATACCACCCCGCCGCATCAACATCATCGA-ACCACACCGACATCATCATAATA------------
droBia1 TTTA--------TTTGTATGGATTTTTCGGCGTGGCGGTAAATTGAATGATGAGTGGGAGGATGTCGCCTGCCATTGTTCGGCCGATAAGGGAGCCTGCCA-ACTATTACCTGGCGC--TGAAACGGGAGCCCACCTGTCAATCAATACCACCCCGCCGCATCAGCAGCAACGAC-----------ACCATCATAATAATCACCGTCATC
droTak1 T-------------TGTATGGATTTTTCGGCGT------------------------------------TGCCATTGTTCGGCTGATAAGGGAGCCTGGCA-ACTATTACCTGGCGC--TGAAACGGGAGCCCACCTGTCAATCAATACCACCCCGCCGCATCA---------GC-----------AT------CAACATCACCG-----
droEle1 ---ATATATATTTTTGTATGGATTATTCGGCGTGGCAGTAAATTGAATGACGAGTGGGAGGATGTCGC-TGCCATTGTTCGCCTGATAAGGGAGCCGGGCCAACTATTACCTGGCGCGCTGAAACGGGAGCCCACCTGTCAATCAATACCACACCGCCGCATCA----------------------------------------------
droRho1 T------------TTGTATGGATTTTTCGGCGTGGCGGTAAATTGAATGACGAGCGGGAGGATATCGC-TGCCATTGTTCGGCTGATAAGGGAGCCGGGCA-ACTATTACCTGGCGC--TGAAACGGGAGCCCACCTGTCAATCAATACCACCCCGCCGCATCA----------------------------------------------

20-way Secondary Structure

dm3 droSim1 droSec1 droYak2 droEre2 droEug1 droBia1 droTak1 droEle1 droRho1 droFic1 droKik1 droAna3 droBip1 dp4 droPer1 droWil1 droVir3 droMoj3 droGri2
RNAfold Image
UNAFold Image

Small RNA-seq read pileup

Species Alignment
droSim1
TGTTTT--------TGTATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCA---------GCCATTGTTTGGTT-GATAAGGGAGCCTGGCGC----------------------------------------------------------------------ACTATTACCTGGCTCTCTG----------------------------------AAACGAGAGCCCA---------------------CCTGTAAATCAATACCACCCCGCCGAA---GCGAC-------------------------ATCATCATAATAATCATCGCCTGCSizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGGGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2311.000.001.000.000.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2411.000.001.000.000.00
...................................C-----------------GGTAAATCGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.000.001.000.000.00
droSec1
TATATATATGTTTTTATATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCA---------GCCATTGTTTGGTT-GATAAGGAAGCCTGGCGC----------------------------------------------------------------------ACTATTACCTGGCTCTCTG----------------------------------AAACGAGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCGAA---GCGAC-------------------------A------------TCATCGCCTTTSizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................221198.0012.009.00177.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................241138.003.00122.0013.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23152.007.0012.0033.00
.....................................................GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................23112.004.004.004.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................21110.000.002.008.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2018.000.000.008.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AT--------------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................................................2514.000.001.003.00
...................GGATTTTTCGGCGTGGC-----------------GG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.001.003.000.00
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCA---------------------CCTGTCAATCAATACCACC.................................................................2214.000.004.000.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------T.......................................................................................................................................................................................................................................................................................................................................................................................................2413.002.000.001.00
.....................................................GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2213.001.000.002.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAG............................................................................................................................................................................................................................................................................................................................................................................................................................1913.000.000.003.00
...................................C-----------------GGTAAATTGAGTGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2212.001.001.000.00
...................................T-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2412.000.002.000.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGA----------------........................................................................................................................................................................................................................................................................................................................................................................................................2312.000.000.002.00
......................................................GTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2212.000.002.000.00
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCA---------------------CCTGTCAATCAATACCACT.................................................................2212.000.002.000.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGT----------------........................................................................................................................................................................................................................................................................................................................................................................................................2312.000.001.001.00
..................................GC-----------------GGTAAATTGAATGA------------------------------------------TGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.000.000.001.00
...................................C-----------------GTTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2411.000.001.000.00
.....................................................GGTAAATTGAACGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.000.000.001.00
.....................................................CGTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2211.000.000.001.00
.......................................................TAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.000.000.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------C.......................................................................................................................................................................................................................................................................................................................................................................................................2411.000.000.001.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGCGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2411.000.001.000.00
........................................................AAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2011.001.000.000.00
..............................................................................................................................................................................................................................................................ATTGTTTGGTT-GATAAGGAAGCCTG.....................................................................................................................................................................................................................................................2511.000.001.000.00
...................................A-----------------GGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.000.000.001.00
...................................C-----------------GGTACATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.000.000.001.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGATTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.000.000.00
................................TGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.000.000.00
...................................C-----------------GGTAAAATGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.000.000.001.00
........................................................AAATTGAATGA------------------------------------------TGAGTGGG----------------T.......................................................................................................................................................................................................................................................................................................................................................................................................2011.001.000.000.00
...................................C-----------------GGTAAATTAAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.000.000.001.00
.....................................................GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------C.......................................................................................................................................................................................................................................................................................................................................................................................................2311.000.001.000.00
...................................C-----------------GTTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2311.000.000.001.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TTAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.000.000.001.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAATGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2311.000.000.001.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGATTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2411.000.001.000.00
...................................C-----------------GGTAACTTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2411.000.001.000.00
.....................................................CGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.000.000.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGCGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2311.000.000.001.00
.......................................................TAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2011.001.000.000.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------TC--------------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................................................2511.000.000.001.00
...................................C-----------------GGTAAATTGAATAA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2311.000.001.000.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.000.000.001.00
...................................T-----------------GGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.000.000.001.00
............TTTATATGGATTTTTCGGCGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.000.000.001.00
...............................................................................................................................................................................................................................................................TGGTTTGCTT-GATAAGGA...........................................................................................................................................................................................................................................................1811.000.000.001.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGGGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2411.000.001.000.00
...........................................................TTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATG................................................................................................................................................................................................................................................................................................2211.000.000.001.00
...................................C-----------------TGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.000.000.001.00
droYak2
---------------GTATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCA---------GCCATTGTTTGGCT-GATAAGGGAGCCTGGCGC----------------------------------------------------------------------ACTATTACCTGGCCCTCTG----------------------------------AAACGAGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCGAA---CCGAC-------------------------ATCATCATAATAATCATCGCCAGCSizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................223128.332.6713.0041.0071.670.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C223128.332.6713.0041.0071.670.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C233107.337.0023.6728.000.0048.67
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................233107.337.0023.6728.000.0048.67
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24356.670.005.3324.0027.330.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C24356.670.005.3324.0027.330.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C20347.330.002.674.3318.3322.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................20347.330.002.674.3318.3322.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAG............................................................................................................................................................................................................................................................................................................................................................................................................................19313.670.001.331.335.006.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C19313.670.001.331.335.006.00
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCA---------------------CCTGTCAATCAATACCACC.................................................................22313.0011.000.000.000.002.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C24310.330.001.330.006.003.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------T.......................................................................................................................................................................................................................................................................................................................................................................................................24310.330.001.330.006.003.00
.....................................................GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2338.331.000.334.003.000.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2135.330.330.000.333.671.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2135.330.330.000.333.671.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2434.000.000.000.000.333.67
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------G.......................................................................................................................................................................................................................................................................................................................................................................................................2434.000.000.000.000.333.67
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2332.670.000.670.002.000.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGTG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2332.670.000.670.002.000.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2432.330.670.000.001.000.67
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------C.......................................................................................................................................................................................................................................................................................................................................................................................................2432.330.670.000.001.000.67
......................................................GTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2232.000.330.001.000.670.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2232.000.000.000.331.670.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................2232.000.000.000.331.670.00
...................................C-----------------GGTAAATTGACTGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2331.670.000.000.001.670.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2231.670.000.000.001.670.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2331.670.000.330.001.330.00
...................................C-----------------GGCAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2231.670.000.000.001.670.00
...................................C-----------------GGCAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2331.670.000.330.001.330.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2331.670.000.000.001.670.00
.....................................................GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2231.670.000.330.001.330.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGATTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2331.330.000.000.001.330.00
..................................GC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2331.330.000.000.000.001.33
.......................................................TAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2131.330.000.001.330.000.00
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC2331.330.000.000.000.001.33
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2331.330.000.000.001.330.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2231.000.000.000.000.670.33
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2531.000.330.000.000.000.67
...................................C-----------------GGGAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2231.000.000.000.000.670.33
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AT--------------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................................................2531.000.330.000.000.000.67
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................2031.000.000.000.000.001.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2331.000.330.000.000.670.00
...................................C-----------------GGTAAATTGAGTGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2331.000.330.000.000.670.00
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCA---------------------CCTGTCAATCAATACCACT.................................................................2231.001.000.000.000.000.00
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C2031.000.000.000.000.001.00
droEre2
T--------------GTATGAATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCA---------GCCATTGTTTGGCT-GATAAGGGAGCCTGGCGC----------------------------------------------------------------------ACTATTACCTGGCCCTGTG----------------------------------AAACGAGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCGAA---CCGAC-------------------------ATCATCATAGTAATCAT-------SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2219588.0011.00217.000.009360.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2315037.0038.00326.000.004673.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2412136.00143.00105.000.001888.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111364.005.0041.000.001318.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2011225.000.0048.000.001177.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAG............................................................................................................................................................................................................................................................................................................................................................................................................................191616.000.0017.000.00599.00
.....................................................GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................231246.005.007.000.00234.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------T.......................................................................................................................................................................................................................................................................................................................................................................................................241150.000.004.000.00146.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................221127.000.008.000.00119.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTTGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................231110.000.001.000.00109.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TTAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................221101.000.000.000.00101.00
...................................A-----------------GGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................221100.000.000.000.00100.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................22190.000.000.000.0090.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................22185.000.004.000.0081.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGT----------------........................................................................................................................................................................................................................................................................................................................................................................................................23178.000.004.000.0074.00
...................................C-----------------TGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22178.000.000.000.0078.00
.....................................................GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................22176.000.006.000.0070.00
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCA---------------------CCTGTCAATCAATACCACC.................................................................22167.0016.002.000.0049.00
.....................................................GGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................21162.000.002.000.0060.00
...................................C-----------------GGTAAATTTAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22159.000.000.000.0059.00
...................................C-----------------GGTAAATTGAATTA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22156.000.000.000.0056.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTTGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24154.003.000.000.0051.00
...................................C-----------------TGTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23148.000.000.000.0048.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TTAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23148.001.000.000.0047.00
...................................A-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23145.000.000.000.0045.00
...................................C-----------------GTTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22144.000.000.000.0044.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGA----------------........................................................................................................................................................................................................................................................................................................................................................................................................23144.000.001.000.0043.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGC----------------........................................................................................................................................................................................................................................................................................................................................................................................................23140.000.002.000.0038.00
..................................GC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................23135.000.002.000.0033.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AT--------------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................................................25135.000.002.000.0033.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGATTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23134.000.004.000.0030.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGTG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24132.006.003.000.0023.00
...................................C-----------------GTTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23131.000.001.000.0030.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGATTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22131.000.001.000.0030.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGTG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23129.001.0010.000.0018.00
...................................C-----------------GGCAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22128.000.000.000.0028.00
...................................C-----------------GGTAAATTTAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23127.000.000.000.0027.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGT----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24126.003.000.000.0023.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TTAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24125.002.001.000.0022.00
...................................C-----------------TGTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24124.000.000.000.0024.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGC----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24124.000.000.000.0024.00
......................................................GTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................20120.000.001.000.0019.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TTAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................21120.000.000.000.0020.00
...................................C-----------------GGTAAATTAAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22119.000.000.000.0019.00
......................................................GTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................22119.000.000.000.0019.00
......................................................GTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................21119.000.001.000.0018.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AA--------------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................................................25117.000.001.000.0016.00
...................................A-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24117.000.000.000.0017.00
...................................A-----------------GGTAAATTGAATGA------------------------------------------TGAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................21117.000.000.000.0017.00
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCA---------------------CCTGTCAATCAATACCAC..................................................................21117.001.002.000.0014.00
...................................C-----------------GATAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22117.000.000.000.0017.00
...................................T-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23116.000.000.000.0016.00
...................................C-----------------GGTAAATTTAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24116.001.000.000.0015.00
...................................T-----------------GGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22116.000.002.000.0014.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------C.......................................................................................................................................................................................................................................................................................................................................................................................................24116.002.003.000.0011.00
...................................C-----------------GGTAAATTGAATTA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23115.000.000.000.0015.00
...................................C-----------------GGTAAATTTAATGA------------------------------------------TGAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................21114.000.000.000.0014.00
.......................................................TAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................20113.000.000.000.0013.00
...................................C-----------------GGTAAATTGAGTGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22113.000.000.000.0013.00
...................................C-----------------GGCAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23113.000.003.000.0010.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22113.000.000.000.0013.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGA----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24113.000.000.000.0013.00
...................................C-----------------GCTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22113.000.000.000.0013.00
...................................C-----------------CGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22112.000.001.000.0011.00
...................................C-----------------GGAAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22112.000.000.000.0012.00
.....................................................GGTAAATTGAATGA------------------------------------------TGAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................20112.000.000.000.0012.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TTAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................20112.000.000.000.0012.00
...................................C-----------------TGTAAATTGAATGA------------------------------------------TGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................20111.000.000.000.0011.00
...................................C-----------------GGTAAATTGAATGG------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22111.000.000.000.0011.00
...................................C-----------------GGTAAATTAAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23110.000.001.000.009.00
...................................C-----------------GGTAAATTGAATTA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24110.000.000.000.0010.00
...................................C-----------------GGTAAACTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22110.000.000.000.0010.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGA.............................................................................................................................................................................................................................................................................................................................................................................................................................18110.000.000.000.0010.00
...................................C-----------------GCTAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23110.000.000.000.0010.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TTAG............................................................................................................................................................................................................................................................................................................................................................................................................................19110.000.000.000.0010.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGACTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22110.000.000.000.0010.00
...................................C-----------------GATAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................23110.000.001.000.009.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22110.000.000.000.0010.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGGGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22110.000.001.000.009.00
...................................C-----------------GTTAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................24110.003.000.000.007.00
...................................C-----------------GGTxAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................21110.000.000.000.0010.00
...................................C-----------------AGTAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22110.000.000.000.0010.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TAAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22110.000.000.000.0010.00
...................................C-----------------GGTAAGTTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................22110.000.001.000.009.00
...................................A-----------------GGTAAATTGAATGA------------------------------------------TGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2019.000.001.000.008.00
.......................................................TAAATTGAATGA------------------------------------------TGAGTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2119.000.000.000.009.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................2219.000.002.000.007.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGATTGGG----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................2419.003.000.000.006.00
...................................C-----------------GGTAAATTTAATGA------------------------------------------TGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2019.000.000.000.009.00
...................................C-----------------GGTAAATCGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2219.000.000.000.009.00
...................................C-----------------TGTAAATTGAATGA------------------------------------------TGAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2119.000.000.000.009.00
...................................C-----------------GGTAAATTGAATAA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2219.000.000.000.009.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------CGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2219.000.000.000.009.00
...................................C-----------------GGTAAATTGAATGC------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2318.000.001.000.007.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2218.000.001.000.007.00
...................................C-----------------GGAAAATTGAATGA------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2318.000.002.000.006.00
...................................C-----------------GGTAAATTGAATGC------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2218.000.000.000.008.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------TT--------------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................................................2518.000.000.000.008.00
...................................C-----------------GGGAAATTGAATGA------------------------------------------TGAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2218.000.001.000.007.00
...................................C-----------------GGTAAATTGAATGA------------------------------------------TGCGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2218.000.000.000.008.00
...................................C-----------------GGTAAATTGAATGG------------------------------------------TGAGTGGG----------------........................................................................................................................................................................................................................................................................................................................................................................................................2318.000.001.000.007.00
droEug1
T-------------TGTATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCC--------TGCTATTGTTCGGTT-GATAAGGGAGCCTGGC-----------------------------------------------------------------------AACTATTACCTGGCGC--TG----------------------------------AAACGGGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCG---------CATCAACATCATCGAACCACACCGACATCATCATAATA------------SizeHit CountTotal Norm
droBia1
TTTATT--------TGTATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------TGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCC--------TGCCATTGTTCGGCC-GATAAGGGAGCCTGCC-----------------------------------------------------------------------AACTATTACCTGGCGC--TG----------------------------------AAACGGGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCG---------CATCAGCA----------GCAACGACACCATCATAATAATCACCGTCATCSizeHit CountTotal Norm
droTak1
T-------------TGTATGGATTTTTCGGCGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCATTGTTCGGCT-GATAAGGGAGCCTGGC-----------------------------------------------------------------------AACTATTACCTGGCGC--TG----------------------------------AAACGGGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCG---------CATCA-------------------------GCATCAACATCACCG-----SizeHit CountTotal Norm
droEle1
AT---ATATATTTTTGTATGGATTATTCGGCGTGGC-----------------AGTAAATTGAATGA------------------------------------------CGAGTGGG----------------AG--------------------------------------------------------------------------------------------------GATGTCGCT---------GCCATTGTTCGCCT-GATAAGGGAGCCGGGCCA----------------------------------------------------------------------ACTATTACCTGGCGCGCTG----------------------------------AAACGGGAGCCCA---------------------CCTGTCAATCAATACCACACCGCCG---------CATCA---------------------------------------------SizeHit CountTotal Norm
droRho1
TT------------TGTATGGATTTTTCGGCGTGGC-----------------GGTAAATTGAATGA------------------------------------------CGAGCGGG----------------AG--------------------------------------------------------------------------------------------------GATATCGCT---------GCCATTGTTCGGCT-GATAAGGGAGCCGGGC-----------------------------------------------------------------------AACTATTACCTGGCGC--TG----------------------------------AAACGGGAGCCCA---------------------CCTGTCAATCAATACCACCCCGCCG---------CATCA---------------------------------------------SizeHit CountTotal Norm
droFic1
C-------------TGTATGGATTTTTCGGCGTGGC-------GT--------GGTAAATTGAATGATGAGTGGGTA--------------------------------TG--GGAGTGGGAGTGGCAGTGGGGG--------------------------------------------------------------------------------------------------GATGTCGCA---------GCCATTGTTCGGCT-GATAAGGGAGCCGGGC-------------------------------------------------------------------AGGCAACTATTACCTGCCGC--TG----------------------------------GAACGGGAGTCCG---------------------CCTGTCAATCAATACCACCCCGCGG---------CATCA-------------------------TCGCACC-GACATCATCGTCSizeHit CountTotal Norm
droKik1
TATATATATACTAATGTATATA--------TTTA--------------------------------G------------------------------------------CCAACAGG----------------GGGTTAACTTTCTTAT-------CGATGG-TTTTCGAGCATTTAAAA-----------------------------------------------------TTGGTTGCT-----------GATTGCTGTCTT-CAAAATAAAGCCCAGCTT----------------------------------------------------------------------AGGTTTAACTTGGTCTAAG------------------------------------------AGCCA-----------------------------------------------------------------------------------------------------CCCTSizeHit CountTotal Norm
droAna3
TGTATATGT--------GTGGGTGTAGAGGTGTGTA-----------------GGTGTGCAGGTGTA------------------------------------------CGGTTGTG----------------TG--------------------------------------------------------------------------------------------------TGTGTGGCATTCGTTGCTACTTATGTTT----AAGCTTCGTATTTAAG-------------------------------------------------------------------------------------------------------CTTTTTGCACGATTTCCTCTAACAAATGGATTTTCA---------------------CTTGTTG----------CCCAGCCAGACGAACGAA-------------------------GCCATCACAAAAAT----------SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
........T--------GTGGGCGTAGGGGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.000.000.001.000.00
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------2190.110.000.000.000.11
........T--------GTGGGTGTAGGGGCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.000.000.001.000.00
.....ATGT--------GTGGGTGxGGAGGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.000.001.000.000.00
droBip1
TT-----------------------CTCGGCGGGATACGGCCTCT--------CGTAAATTGAATGA------------------------------------------TGAGCAGA----------------AGGGTGGGGTTTGGGT-------GGGTGGACGGTCTGGCATGACAAT-----------------------------------------------------GATGTCGCC--------TGCCATTGTTTGGGA-GATAAGGGACCCAGGGTC-----------------------------------------------------------------TGGGAACTATTACCTGGTCGGGTG-----------------------------GGGAGAAACGAGATCCTG--------GCGGAGTCGGGAGCCTGTCAATCAATGGGATGCCACC------------------------------------------------GCCGCCGCCAGTSizeHit CountTotal Norm
dp4
TATATG--------------GCCTATCCAGCAGGAA-------TTTATCCAGCG--------GATGGTAGCTAGAGA--------------------------------TG--CAGTTGG-------------AG--------------------------------------------------------------------------------------------------GGGGGC------------ACCATAGTTTGGAG-TAGCCAAATGCCAGGCGA-----------------------------------------------------------TAAGG------CATGAAA------AA--TA----------------------------------CAACTAATAAACATAAACCAG-------------TCTTCTTTTAAAAGCTGCT---------------C-------------------------ATCATCATCATCATCATGATCATCSizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCATCATCATCATCATC19440.020.000.020.000.00
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT---------------C-------------------------ATCATCATCATCATC.........19440.020.000.020.000.00
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCATCATCATCATCATC22270.040.040.000.000.00
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------ATCATCATCATCATCAGCA.....20340.030.030.000.000.00
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT19440.020.000.020.000.00
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCATCATCATCATCATC...19440.020.000.020.000.00
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------ATCATCATCACCATCATCA.....20360.030.000.030.000.00
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------ATCATCATCATCATCACT......19200.050.050.000.000.00
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCATCACCATCATCA..20360.030.000.030.000.00
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------ATCATCATCATCATCATCATC...22270.040.040.000.000.00
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCATCATCATCAGCA..20340.030.030.000.000.00
......................................................................CGTGAGA--------------------------------TG--CAGTTGG-------------AG--------------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................................................1811.001.000.000.000.00
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------TTCATCATCATCATCATC......19440.020.000.020.000.00
droPer1
CATAAAAGGGTCTGAGTATC--------TGAG--------------------------------CGT----------CTGGGTGGAACCTC---TGTG----------CTG--CTAA----------------TG---------------------------------------------TTAGCTGATCCCTCTCCTCCCTCCCACTCGGTCCCTGCCCCC----------------------------------------GCT-C-CCTTGGTGGCTGTTGC----------------------------------------------------------------------ACTTTCCCCCGGGGCTCTGGAGTGTGCACACTTTTGGCATAATA----CAACAAAATTGATT---------------------------------------------TGCAG--------CA-------------------------TGCATCATTATCAACATCGTCGTTSizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
.................................................................................GTGGxACCTC---TGTT----------CTG--CT..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.000.000.000.000.001.00
...............................................................................GGGTGGxACCTC---TGTT----------CTG--CT..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.000.000.000.000.001.00
droWil1
TTTTTTGAAATGTTTGTA--------AATGTGTGTG-----------------TGTTTGTGTGTGAA------------------------------------------GAAGAAT--------------G--TG-------------TGTATGTG------------------------CTGACTAGTT----------------------------CAATAATGCCCAGAGAATGTTA-------------------------------------------C----------------------------------------------------------------------AAGTTTAATGGAAGTTTTCA---------------------------------AATAGAAAAGCTA---------------------AAAGGAATTTAATTTTAGACATCAGTT---TCGAA-----------------GC------ATCGGCATCACAATCATCCCCATTSizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------AGAGGGATTTAATTTTA...................................................................1828.000.008.000.000.00
.............ATGTA--------AATGAGTGTG-----------------TGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1825.500.000.505.000.00
...........................ATGTGTGTG-----------------TGTGTGTATGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.500.000.360.140.00
..........TGTATGTA--------AATGAGTGTG-----------------TGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.000.000.006.000.00
...................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------AAAGGGATTTAATTTTT...................................................................1816.000.005.001.000.00
.............ATGTA--------AATGAGTGTG-----------------TGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.000.000.003.000.00
...................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------AGAGGAATTTAATTTTT...................................................................1813.000.002.001.000.00
.............ATGTA--------AATGTGTGTG-----------------TATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.750.000.750.000.00
droVir3
TATATATATAGATATATATATA--------TATATA-----------------TGCT--GGGTTATA-----------------------------------------TGA--CTTT---------------------------------------------------------------------------------------------------------------------TGG-----------------------GTGCT-GATAAGAGG--CGTTCAG---------------CTCA-------GTGCCAGAGCCCAGCGGCTAATTGACAGCCCCACGGGCCATG--CGGTTAA------AT--TA----------------------------------AAACGAAAAATCA---------------------TTTGCCAGC-AGCA-------------------AC------AGCAGCA-GCAGCAGCGGCAGCAGC-----------------ASizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------AGCAGCA-GxAGCAGCGGC........................19310.130.130.000.000.000.00
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------------------AC------AGCAGCA-GCAGCAGTGGAAGC.....................25220.050.050.000.000.000.00
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------------------AC------AGCAGAA-GCAGCAGCGGCAGGA....................26100.100.000.000.100.000.00
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------AC------AGAAGCA-GCAGCAGCGGC........................216050.000.000.000.000.000.00
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCGGCAGCGGC-----------------A19380.030.000.000.030.000.00
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------AC------AGCAGCA-GCAGCAGTGGAAG......................23370.030.000.030.000.000.00
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------AC------AGCAGCA-GCAGCAGCGCCA.......................22170.060.060.000.000.000.00
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------------------AC------AGCAGCA-GCTGGAGCGGC........................22330.030.000.000.030.000.00
.......................................................................................................................................................................................................................................................................................TTTAG---------------CTCA-------GTGGCAGAG..............................................................................................................................................................................................................1811.000.000.001.000.000.00
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA-GCAGCAGCGTCAGCAGC-----------------A25410.020.000.000.020.000.00
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-------------------AC------AGCAGCA-GCAGCAGTGGAAG......................25300.030.000.000.030.000.00
droMoj3
TAGCAACTCGTTTCTGTTGC--------TGTA-------------------------TGTGTAGCTG-----------------TAGCTGTATCTGTAGCTGTATCTG-TGGCTGT--------------A--TC-------------TGTATCTG------------------------GCAGCTGG------------------------------CAGCAGTAGCTGGTAGCTGCTG---------CTGGCTCT-------------------------------------------------------------------------------------------------GTTGCTGCCAGAGTATCTG---------TATCTGTGGCGCGTCA----T----------------------------------------TGTTGT----------------GCG---TTGCC-------------------------GTTGCCATCGTAACCAACGCCGTCSizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
..........................................................GAGTAGCTG-----------------TATCTGTATCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2150.200.000.000.000.20
..................................................................G-----------------TAGCTGTAGCTGTAGCTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................20100.100.100.000.000.00
............................................................GTAGCTG-----------------TAGCTGTAGCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................20100.100.100.000.000.00
droGri2
TACATCCACATCGCTGCT--------TCGGCTTATG-------------TTGTGGTAAGTCATTAGA------------------------------------------TG--CAGA----------------TG--------------------------------------------------------------------------------------------------ATTGGCGTC---------ATCATCGCCTGCTTCCACATCATAGTCAAGGGTATTCTTTTCTGCCGTCTCAATGAGCG---CTAGCG-------------------C---------------CGATGAG-------------------------------ATATCA----A----------------------------------------CGA--------GGTGCT---------------C-------------------------TTCATCATCATCATCATCGTCATCSizeHit CountTotal NormV109
Male body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATCCTCATCATCATCGTC...21170.060.06

Generated: 04/20/2012 at 05:28:54 EDT