dme-mir-284- 12- and 20-way alignments

dme-mir-284	chr3R:8377237-8377336 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	three_prime_UTR

Legend:

   mature strand at position 8377249-8377269
   star strand at position 8377302-8377327
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chr3R:8377222-8377351 -	---------------------ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGA--------------------------------TATTCCTCAACAATG
droSim1	chr3R:13050845-13050974 +	---------------------ATAACGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAATACTGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGA--------------------------------TATTCCGCAACAATG
droSec1	super_0:13609227-13609356 +	---------------------ATAATGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAATACTGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGA--------------------------------TATTCCGCAACAATG
droYak2	chr3R:12662228-12662357 -	---------------------ATAATGGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAA--------------------------------TATTCCGCAACAATG
droEre2	scaffold_4770:13275536-13275665 +	---------------------TTAATGGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAA--------------------------------TATTCCGCAACAATG
droAna3	scaffold_12911:3307955-3308116 -	---------------------ACAAAAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGAACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAGTACAGCAGAAAGAGCCGTGAACCGTGTTCAATATGCCACGACAATG
dp4	chr2:2484975-2485100 -	---------------------ATCAGAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGGGAAGG-CAAGGCTTGAGCACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAG------------------------------------CACAACGCTG
droPer1	super_7:2652965-2653090 -	---------------------ATCAGAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGGGAAGG-CAAGGCTTGAGCACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAG------------------------------------CACAACGCTG
droWil1	scaffold_181130:2186204-2186341 -	AGTAA------G----TATGTGTGTGTGACAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTTAGGGGAAAGGCTTGAGCATTGCATACTAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAG------------------------------------CTCAACGTTC
droVir3	scaffold_12855:584449-584590 +	TGTAT-TCAATT----TTTGGATAAATGGAAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTAAAGG-GAAGGCTTGTGCACTGCTTACAAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAG------------------------------------GACAACGTTG
droMoj3	scaffold_6540:12381805-12381927 -	---------------------TGTAT---TAATTGCGTTGCAGTTCCTGGAATAAAGTTGACTGTGTCGCCTGTAAGGG-GAAGGCTTTTGCATTGCTTACAAAGTCAGCAACTTGATTCCAGCAACTGCGGCCCAAG------------------------------------CTCAACGTGG
droGri2	scaffold_14906:1700680-1700824 +	GTTGTTTCTCTTTACTAAT--AGATATGGAAATTGGGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTAAGAG-GAAGGCTTGTGCACTGCTTACAAAGTCAGCAACTTGATTCCAGCAATTGCGGCTCAAA------------------------------------CTCAACGTTG

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chr3R:8377222-8377351 -	NA	ATA---------ATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CGA-----------------------------------TATTCCTCAACAATG
droSim1	chr3R:13050845-13050974 +	1	ATA---------ACGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAATACTGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CGA-----------------------------------TATTCCGCAACAATG
droSec1	super_0:13609227-13609356 +	1	ATA---------ATGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAATACTGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CGA-----------------------------------TATTCCGCAACAATG
droYak2	chr3R:12662228-12662357 -	3	ATA---------ATGGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAA-----------------------------------TATTCCGCAACAATG
droEre2	scaffold_4770:13275536-13275665 +	1	TTA---------ATGGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAA-----------------------------------TATTCCGCAACAATG
droEug1	scf7180000409615:590796-590934 -	1	ATGATGATTACAATGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTATTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAA-----------------------------------TATTCCGCAACGAAG
droBia1	scf7180000302402:52708-52835 -	1	ACA---------ACAGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTACTGCTTCCGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAA-----------------------------------TAATCCGCAACAA--
droTak1	scf7180000415366:178200-178329 +	1	ACG---------ATGGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAA-----------------------------------TATTCCGCAACAATG
droEle1	scf7180000490994:49794-49921 -	3	ACG---------AAAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAA-----------------------------------TATTCCGCAACAA--
droRho1	scf7180000779135:15068-15197 +	1	AGG---------AAAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAA-----------------------------------TATTCCGCAACAAAG
droFic1	scf7180000453812:740387-740517 +	1	AGTA--------AAAGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGAAATTCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAA-----------------------------------TATTCCGCAACAATA
droKik1	scf7180000302256:694399-694526 +	1	ATAT--------AGAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTACTGCTTCCGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCGCAA-----------------------------------TAATCCGCATC----
droAna3	scaffold_12911:3307955-3308116 -	1	ACA---------AAAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGAACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAAGTACAGCA---GAAAGAGCCGTGAACCGTGTTCAATATGCCACGACAATG
droBip1	scf7180000396640:173076-173237 -	1	ACA---------AAAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGAACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAAGTACAGCA---GAAAGAGCCGTGAACCGTGTTCAATATGCCACGACAATG
dp4	chr2:2484958-2485100 -	2	ATC---------AGAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGGGAAGG-CAAGGCTTGAGCACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAAGCACAACGCTGAATGG------------TGCTCAAAATAC----------
droPer1	super_7:2652948-2653090 -	2	ATC---------AGAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGGGAAGG-CAAGGCTTGAGCACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAAGCACAACGCTGAATGG------------TGCTCAAAATAC----------
droWil1	scaffold_181130:2186197-2186330 -	2	GTG---------TGTGACAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTTAGGGGAAAGGCTTGAGCATTGCATACTAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAAGCTCAA-----------------------------CGTT---CAACAGTG
droVir3	scaffold_12855:584465-584599 +	1	ATA---------AATGGAAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTAAAGG-GAAGGCTTGTGCACTGCTTACAAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CAAGGACAACGTTGGAAAGTGTC------------------------------
droMoj3	scaffold_6540:12381805-12381927 -	3	TGT---------AT---TAATTGCGTTGCAGTTCCTGGAATAAAGTTGACTGTGTCGCCTGTAAGGG-GAAGGCTTTTGCATTGCTTACAAAGTCAGCAACTTGATTCCAGCAACTGCGGCC-CAAG---------------------------------------CTCAACGTGG
droGri2	scaffold_14906:1700701-1700824 +	1	ATA-----------TGGAAATTGGGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTAAGAG-GAAGGCTTGTGCACTGCTTACAAAGTCAGCAACTTGATTCCAGCAATTGCGGCT-CAAA---------------------------------------CTCAACGTTG

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

---------------------ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGA--------------------------------TATTCCTCAACAATG

Size

Hit Count

Total Norm

droSim1

---------------------ATAACGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAATACTGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGA--------------------------------TATTCCGCAACAATG	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
.............................................CCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	111259.00	18.00	94052.00	6869.00	10320.00
.............................................CCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	62496.00	23.00	52569.00	6868.00	3036.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCT................................................................................................................	27	1	6840.00	1.00	5989.00	781.00	69.00
........................................................................................................GTCAGCAACTTGATTCCAGCAA..........................................................	22	1	4973.00	75.00	4320.00	229.00	349.00
........................................................................................................GTCAGCAACTTGATTCCAGC............................................................	20	1	3862.00	0.00	3777.00	71.00	14.00
.............................................CCTGGAATTAAGTTGACTGTGTAG...................................................................................................................	24	1	3762.00	3.00	3080.00	568.00	111.00
........................................................................................................GTCAGCAACTTGATTCCAGCA...........................................................	21	1	3735.00	24.00	3579.00	89.00	43.00
.............................................CCTGGAATTAAGTTGACTGTGTAGAC.................................................................................................................	26	1	1985.00	0.00	1702.00	91.00	192.00
.............................................CCTGGAATTAAGTTGACTGTGT.....................................................................................................................	22	1	1767.00	0.00	1615.00	142.00	10.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCT.................................................................................................................	26	1	1546.00	0.00	1384.00	149.00	13.00
........................................................................................................GTCAGCAACTTGATTCCAGCAC..........................................................	22	1	1225.00	0.00	1118.00	50.00	57.00
.............................................CCTGGAATTAAGTTGACTG........................................................................................................................	19	1	910.00	0.00	812.00	85.00	13.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCC................................................................................................................	27	1	652.00	0.00	582.00	61.00	9.00
.............................................CCTGGAATTAAGTTGACTGTGG.....................................................................................................................	22	1	343.00	0.00	312.00	30.00	1.00
.............................................CCTGGAATTAAGTTGACTGTTTAGCC.................................................................................................................	26	1	322.00	0.00	295.00	7.00	20.00
.............................................CCTGGAATTAAGTTGACTGTGTCGCC.................................................................................................................	26	1	318.00	0.00	259.00	25.00	34.00
.............................................CCTGGAATTAAGTTGACTGTG......................................................................................................................	21	1	314.00	0.00	283.00	28.00	3.00
.............................................CCTGGAATTAAGTTGACTGTGC.....................................................................................................................	22	1	302.00	0.00	284.00	17.00	1.00
.............................................CCTGGAATTAAGTTGACTTTGTAGCC.................................................................................................................	26	1	275.00	0.00	246.00	9.00	20.00
.............................................CCTGGAATTAAGTTGACxxTGTAGCC.................................................................................................................	24	1	261.00	0.00	230.00	13.00	18.00
........................................................................................................GTCAGCAACTTGATTCCAGCAT..........................................................	22	1	258.00	0.00	245.00	9.00	4.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCG................................................................................................................	27	1	250.00	0.00	217.00	29.00	4.00
.............................................CCTGGAATTAAGTTGACTGTGTA....................................................................................................................	23	1	241.00	0.00	200.00	31.00	10.00
.............................................CCTGGAATTAAGTTGACTGTGTAGA..................................................................................................................	25	1	224.00	0.00	162.00	59.00	3.00
.............................................CCTGGAATTAAGTTGACTGTGTGG...................................................................................................................	24	1	183.00	0.00	148.00	28.00	7.00
.............................................CCTGGAATTAAGTTGACTGT.......................................................................................................................	20	1	179.00	0.00	153.00	25.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTCGC..................................................................................................................	25	1	175.00	0.00	150.00	14.00	11.00
.............................................CCTTGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	160.00	0.00	134.00	5.00	21.00
.............................................CCTGGAATTAGGTTGACTGTGTAGCC.................................................................................................................	26	1	153.00	0.00	141.00	10.00	2.00
.............................................CCTGGAATTAAGTTGACTGTxTAGCC.................................................................................................................	25	1	146.00	0.00	116.00	11.00	19.00
.............................................CCTGGAATTAAGTTGACTGTGTAGG..................................................................................................................	25	1	142.00	1.00	108.00	21.00	12.00
.............................................CCTGGAATTAATTTGACTGTGTAGCC.................................................................................................................	26	1	137.00	1.00	125.00	4.00	7.00
.............................................CCTGAAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	131.00	0.00	115.00	7.00	9.00
........................................................................................................GTCAGCAACTTGATTCCAGCG...........................................................	21	1	131.00	0.00	125.00	5.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCA.................................................................................................................	26	1	124.00	0.00	102.00	15.00	7.00
.............................................CCTGGAATTAAGTTGACTCTGTAGCC.................................................................................................................	26	1	117.00	1.00	104.00	3.00	9.00
.............................................CCTGGAATTAAGTTGACTGTGTAAC..................................................................................................................	25	1	117.00	0.00	98.00	13.00	6.00
..............................................CTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	115.00	0.00	99.00	6.00	10.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAA.........................................................	23	1	115.00	0.00	104.00	9.00	2.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAT.........................................................	23	1	114.00	0.00	105.00	6.00	3.00
...................................................ATTAAGTTGACTGTGTAGCC.................................................................................................................	20	1	111.00	0.00	88.00	11.00	12.00
.............................................CCTGGAATTAAGTTGACTGTTTAGC..................................................................................................................	25	1	92.00	0.00	83.00	6.00	3.00
.............................................CCTGGAATTAAGTTGACTGTCTAGCC.................................................................................................................	26	1	91.00	0.00	75.00	0.00	16.00
.............................................CCTGGAATTAAGTTGACTGTGTAA...................................................................................................................	24	1	85.00	0.00	81.00	4.00	0.00
........................................................................................................GTCAGCAACTTxATTCCAGC............................................................	19	1	84.00	0.00	82.00	2.00	0.00
.............................................CCTTGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	80.00	0.00	64.00	12.00	4.00
.............................................CCTGGAATTAAGTTGGCTGTGTAGCC.................................................................................................................	26	1	80.00	0.00	69.00	2.00	9.00
.............................................CCTGGAATTAAGTTGACTGCGTAGCC.................................................................................................................	26	1	80.00	0.00	68.00	4.00	8.00
.............................................CCTGGGATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	79.00	0.00	69.00	7.00	3.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCTT...............................................................................................................	28	1	77.00	0.00	50.00	26.00	1.00
.............................................CCTGGAATTAAGCTGACTGTGTAGCC.................................................................................................................	26	1	75.00	0.00	62.00	8.00	5.00
.............................................CCTCGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	74.00	0.00	63.00	2.00	9.00
........................................................................................................GTCAGCAACTTGATTCCAG.............................................................	19	1	68.00	0.00	67.00	0.00	1.00
........................................................................................................GTCAGCAACTTTATTCCAGC............................................................	20	1	67.00	0.00	67.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTGCGTAGC..................................................................................................................	25	1	63.00	0.00	55.00	5.00	3.00
.............................................CCTGGAATTAAGTTGACTGTGCAGCC.................................................................................................................	26	1	61.00	0.00	55.00	3.00	3.00
.............................................CCTGGAATTAAGTTGGCTGTGTAGC..................................................................................................................	25	1	58.00	0.00	55.00	2.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTAGT..................................................................................................................	25	1	57.00	0.00	51.00	5.00	1.00
..............................................CCTGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	57.00	0.00	47.00	2.00	8.00
.............................................CCTGGGATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	57.00	1.00	49.00	5.00	2.00
........................................................................................................GTCAGCAACTTGATTCCAGCAG..........................................................	22	1	56.00	1.00	50.00	1.00	4.00
.............................................CCTGGAATTAAGTTGACTGTGTGGCC.................................................................................................................	26	1	54.00	0.00	45.00	4.00	5.00
.............................................CCTGGAATTAAGTTGACTGTGTGAC..................................................................................................................	25	1	54.00	0.00	54.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTxTGTAGCC.................................................................................................................	25	1	54.00	0.00	53.00	1.00	0.00
..............................................CTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	54.00	0.00	48.00	3.00	3.00
.............................................CCTGGAATTAAGTTGACTGGGTAGCC.................................................................................................................	26	1	53.00	0.00	45.00	3.00	5.00
.............................................CCTGGAATTAAGTTGACTGTGTT....................................................................................................................	23	1	52.00	0.00	48.00	4.00	0.00
.............................................CCCGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	52.00	0.00	42.00	5.00	5.00
.............................................CCTCGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	50.00	0.00	45.00	2.00	3.00
.............................................CCTGGAATTAAGTTGACCGTGTAGCC.................................................................................................................	26	1	45.00	0.00	36.00	4.00	5.00
...................................................ATTAAGTTGACTGTGTAGC..................................................................................................................	19	1	45.00	0.00	37.00	4.00	4.00
.............................................CCCGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	45.00	0.00	39.00	5.00	1.00
.............................................CCTGGAATTAAGTTGACTGTAG.....................................................................................................................	22	1	44.00	0.00	40.00	2.00	2.00
.............................................CCTGGAATTAGGTTGACTGTGTAGC..................................................................................................................	25	1	44.00	0.00	38.00	6.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCT...........................................................	21	1	43.00	0.00	42.00	1.00	0.00
..................................................AATTAAGTTGACTGTGTAGCC.................................................................................................................	21	1	42.00	0.00	38.00	2.00	2.00
....................................................TTAAGTTGACTGTGTAGCC.................................................................................................................	19	1	42.00	0.00	31.00	3.00	8.00
..............................................CCTGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	41.00	0.00	34.00	4.00	3.00
.............................................CCTGGAATTAAGTTGACTGGGTAGC..................................................................................................................	25	1	40.00	0.00	33.00	5.00	2.00
.............................................CCTGGAATTAAGTTTACTGTGTAGCC.................................................................................................................	26	1	39.00	1.00	29.00	2.00	7.00
.............................................CCTGGAATTAAGCTGACTGTGTAGC..................................................................................................................	25	1	39.00	0.00	29.00	7.00	3.00
.............................................TCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	38.00	0.00	33.00	1.00	4.00
.............................................CCTGGAATTAAGTTGACTGTATAGCC.................................................................................................................	26	1	38.00	0.00	34.00	1.00	3.00
.............................................CCTGGAATTAAGTTGACT.........................................................................................................................	18	1	38.00	0.00	35.00	2.00	1.00
........................................................................................................GTCAGCAACTTCATTCCAGC............................................................	20	1	37.00	0.00	37.00	0.00	0.00
.............................................CCTGGAATTAAGTCGACTGTGTAGCC.................................................................................................................	26	1	37.00	0.00	31.00	2.00	4.00
.............................................CCTGGAATTAAGTTGACTGTGTGGC..................................................................................................................	25	1	37.00	0.00	30.00	6.00	1.00
.............................................CCTGGAATTAAGTTGACTATGTAGCC.................................................................................................................	26	1	36.00	0.00	28.00	5.00	3.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCG.................................................................................................................	26	1	36.00	0.00	29.00	5.00	2.00
.............................................CCTGGAATTAAGTTGACTGTGTAGTC.................................................................................................................	26	1	36.00	0.00	32.00	2.00	2.00
.............................................CCTGGAATTAAGTTGACTGG.......................................................................................................................	20	1	36.00	0.00	34.00	1.00	1.00
.............................................CCTGGAATTAAGTTAACTGTGTAGCC.................................................................................................................	26	1	36.00	0.00	30.00	3.00	3.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCTT................................................................................................................	27	1	35.00	0.00	31.00	3.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTATCC.................................................................................................................	26	1	34.00	0.00	28.00	1.00	5.00
.............................................CCTGGAATTAAGTTGACTTTGTAGC..................................................................................................................	25	1	33.00	0.00	28.00	4.00	1.00
.............................................CCTGGAATTAAGTTGACTGTCTAGC..................................................................................................................	25	1	32.00	0.00	29.00	1.00	2.00
........................................................................................................GTCAGCAACTTxATTCCAGCAA..........................................................	21	1	32.00	0.00	28.00	1.00	3.00
.........................................AGTTCCTGGAATTAAGTTGACTG........................................................................................................................	23	1	31.00	0.00	10.00	0.00	21.00
.............................................CCTGTAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	31.00	0.00	23.00	5.00	3.00
........................................................................................................GTCAGCAACTTxATTCCAGCA...........................................................	20	1	30.00	0.00	29.00	0.00	1.00
.............................................CCTGGAATTAAGTTGACTTTGTAG...................................................................................................................	24	1	30.00	0.00	26.00	3.00	1.00

droSec1

---------------------ATAATGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAATACTGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGA--------------------------------TATTCCGCAACAATG	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
........................................................................................................GTCAGCAACTTGATTCCAGCA...........................................................	21	1	7381.00	282.00	120.00	6979.00
........................................................................................................GTCAGCAACTTGATTCCAGCAA..........................................................	22	1	3910.00	490.00	549.00	2871.00
.............................................CCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	3624.00	907.00	609.00	2108.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	2680.00	503.00	908.00	1269.00
.............................................CCTGGAATTAAGTTGACTGTGTAG...................................................................................................................	24	1	454.00	174.00	51.00	229.00
.............................................CCTGGAATTAAGTTGACTGTGT.....................................................................................................................	22	1	199.00	51.00	5.00	143.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCT................................................................................................................	27	1	180.00	60.00	6.00	114.00
........................................................................................................GTCAGCAACTTGATTCCAGCAT..........................................................	22	1	170.00	25.00	2.00	143.00
.............................................CCTGGAATTAAGTTGACTGTG......................................................................................................................	21	1	164.00	38.00	3.00	123.00
........................................................................................................GTCAGCAACTTGATTCCAGCAC..........................................................	22	1	118.00	13.00	4.00	101.00
........................................................................................................GTCAGCAACTTGATTCCAGC............................................................	20	1	111.00	3.00	1.00	107.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAA.........................................................	23	1	78.00	10.00	8.00	60.00
.............................................CCTGGAATTAAGTTGACTGTGTA....................................................................................................................	23	1	70.00	29.00	3.00	38.00
........................................................................................................GTCAGCAACTTGATTCCAG.............................................................	19	1	60.00	0.00	0.00	60.00
..........................GGGTAATTGCGTTGCAGTT...........................................................................................................................................	19	1	51.00	6.00	18.00	27.00
.........................TGGGTAATTGCGTTGCAGTT...........................................................................................................................................	20	1	48.00	3.00	24.00	21.00
........................................................................................................GTCAGCAACTTGATTCCAGCT...........................................................	21	1	46.00	3.00	0.00	43.00
.........................................................................................................TCAGCAACTTGATTCCAGCA...........................................................	20	1	39.00	0.00	0.00	39.00
..............................................CTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	32.00	7.00	7.00	18.00
.........................................................................................................TCAGCAACTTGATTCCAGCAA..........................................................	21	1	27.00	6.00	2.00	19.00
........................................................................................................GTCAGCAACTTGATTCCAGT............................................................	20	1	27.00	1.00	0.00	26.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAT.........................................................	23	1	27.00	1.00	1.00	25.00
..............................................CTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	25.00	4.00	10.00	11.00
........................................................................................................GTCAGCAACTTGATTCCAGCTT..........................................................	22	1	24.00	1.00	0.00	23.00
.............................................CCTGGAATTAAGTTGACTGT.......................................................................................................................	20	1	20.00	3.00	0.00	17.00
........................ATGGGTAATTGCGTTGCAGTT...........................................................................................................................................	21	1	19.00	4.00	6.00	9.00
........................................................................................................GTCAGCAACTTGATTCCAACA...........................................................	21	1	15.00	1.00	0.00	14.00
........................................................................................................TTCAGCAACTTGATTCCAGCA...........................................................	21	1	15.00	0.00	1.00	14.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCT.................................................................................................................	26	1	15.00	5.00	2.00	8.00
.............................................CCTGGAATTAAGTTGACTGTGTAGA..................................................................................................................	25	1	14.00	9.00	0.00	5.00
........................................................................................................GTCAGCAACTTGATTCCAGCC...........................................................	21	1	13.00	0.00	0.00	13.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCTT...............................................................................................................	28	1	13.00	13.00	0.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCATT.........................................................	23	1	13.00	0.00	0.00	13.00
........................................................................................................ATCAGCAACTTGATTCCAGCA...........................................................	21	1	12.00	1.00	1.00	10.00
...........................................................................................................AGCAACTTGATTCCAGCA...........................................................	18	1	12.00	0.00	1.00	11.00
.............................................CCTGGAATTAAGTTGACTATGTAGC..................................................................................................................	25	1	11.00	5.00	0.00	6.00
........................................................................................................GTCAGCAAATTGATTCCAGCA...........................................................	21	1	11.00	1.00	1.00	9.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAAA........................................................	24	1	11.00	0.00	2.00	9.00
........................................................................................................GTCATCAACTTGATTCCAGCA...........................................................	21	1	11.00	1.00	0.00	10.00
........................................................................................................GTCAGCAGCTTGATTCCAGCA...........................................................	21	1	9.00	0.00	1.00	8.00
........................................................................................................TTCAGCAACTTGATTCCAGCAA..........................................................	22	1	9.00	0.00	0.00	9.00
........................................................................................................ATCAGCAACTTGATTCCAGCAA..........................................................	22	1	9.00	1.00	3.00	5.00
........................................................................................................GTCAGCAACTTGATTCCATCAA..........................................................	22	1	9.00	4.00	0.00	5.00
........................................................................................................GTCAGCAACTTGATTCCAACAA..........................................................	22	1	9.00	5.00	0.00	4.00
.............................................CCTGGAATTAAGTTGACTGCGTAGC..................................................................................................................	25	1	9.00	3.00	2.00	4.00
........................................................................................................GTCGGCAACTTGATTCCAGCA...........................................................	21	1	9.00	0.00	0.00	9.00
.......................................................................................................CGTCAGCAACTTGATTCCAGCA...........................................................	22	1	9.00	1.00	0.00	8.00
.............................................CCTGGAATTAAGTTGACTGTGTAGT..................................................................................................................	25	1	8.00	3.00	2.00	3.00
.............................................CCTGGAATTAAGTTGACxxTGTAGCC.................................................................................................................	24	1	8.00	0.00	4.00	4.00
........................................................................................................GTCAGCAACTTGATTCCAA.............................................................	19	1	8.00	1.00	0.00	7.00
.............................................CCTGGAATTAAGTTGACTGTGTT....................................................................................................................	23	1	8.00	2.00	0.00	6.00
........................................................................................................GTCACCAACTTGATTCCAGCA...........................................................	21	1	8.00	0.00	0.00	8.00
........................................................................................................GTCAGCAACTTGGTTCCAGCA...........................................................	21	1	8.00	0.00	1.00	7.00
........................................................................................................GTCAGCAACTTGATTCCGGCAA..........................................................	22	1	8.00	0.00	1.00	7.00
........................................................................................................GTCAGCAACTTGATCCCAGCA...........................................................	21	1	8.00	1.00	0.00	7.00
.............................................CCTGGAATTAAGTTGATTGTGTAGCC.................................................................................................................	26	1	7.00	0.00	7.00	0.00
........................................................................................................GTCATCAACTTGATTCCAGCAA..........................................................	22	1	7.00	0.00	1.00	6.00
........................................................................................................GTCAGCAACTTGATTCCACCAA..........................................................	22	1	7.00	6.00	0.00	1.00
.............................................CCTTGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	7.00	1.00	2.00	4.00
........................................................................................................GTCAGCAACTTGATTCCATCA...........................................................	21	1	7.00	1.00	0.00	6.00
.............................................TCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	7.00	1.00	3.00	3.00
.............................................CCTGGAATTAAGTTGACTGTGCAGCC.................................................................................................................	26	1	7.00	1.00	1.00	5.00
........................................................................................................GTCAGCAACTTGATTCCACCA...........................................................	21	1	7.00	1.00	0.00	6.00
........................................................................................................GTCAGCAACCTGATTCCAGCA...........................................................	21	1	7.00	1.00	0.00	6.00
.............................................................................................................CAACTTGATTCCAGCAATTGCG.....................................................	22	1	7.00	0.00	3.00	4.00
...........................................................................................................AGCAACTTGATTCCAGCAA..........................................................	19	1	7.00	0.00	1.00	6.00
.............................................CCTGGAATTAAGTTGACTGTGA.....................................................................................................................	22	1	6.00	4.00	0.00	2.00
........................................................................................................GTCAGCAACTTxATTCCAGCA...........................................................	20	1	6.00	1.00	0.00	5.00
.............................................CCTGGAATTAAGTTGACTGTTTAGC..................................................................................................................	25	1	6.00	1.00	1.00	4.00
.............................................CCTGGAATTAAGCTGACTGTGTAGC..................................................................................................................	25	1	6.00	0.00	4.00	2.00
.........................................AGTTCCTGGAATTAAGTTGACT.........................................................................................................................	22	1	6.00	2.00	0.00	4.00
........................................................................................................GTCAGCAACTTGATTCAAGCA...........................................................	21	1	6.00	0.00	1.00	5.00
.............................................CCTGGAATTAAGTTGACTCTGTAGCC.................................................................................................................	26	1	6.00	4.00	1.00	1.00
........................................................................................................GTCAGAAACTTGATTCCAGCA...........................................................	21	1	6.00	0.00	0.00	6.00
........................................................................................................GCCAGCAACTTGATTCCAGCA...........................................................	21	1	6.00	0.00	0.00	6.00
........................................................................................................GCCAGCAACTTGATTCCAGCAA..........................................................	22	1	6.00	2.00	0.00	4.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCA.................................................................................................................	26	1	6.00	1.00	1.00	4.00
........................................................................................................GTCAGCGACTTGATTCCAGCA...........................................................	21	1	6.00	0.00	0.00	6.00
........................................................................................................GTCAGCAACTTGACTCCAGCA...........................................................	21	1	6.00	1.00	0.00	5.00
........................................................................................................GTCAGCAACTTGCTTCCAGCA...........................................................	21	1	6.00	1.00	0.00	5.00
........................................................................................................GTCAGCAACTTGATTCCGGCA...........................................................	21	1	6.00	0.00	1.00	5.00
.............................................CCTGGGATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	6.00	0.00	6.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGTA...........................................................	21	1	5.00	0.00	0.00	5.00
.......................................................................................................CGTCAGCAACTTGATTCCAGCAA..........................................................	23	1	5.00	0.00	0.00	5.00
.............................................CCTGGAATTAAGTTGACTATGTAGCC.................................................................................................................	26	1	5.00	4.00	0.00	1.00
........................................................................................................GTCAGCAACTTGATTCCCGCA...........................................................	21	1	5.00	0.00	0.00	5.00
.............................................CCTGGAATTAAGTTCACTGTGTAGC..................................................................................................................	25	1	5.00	1.00	1.00	3.00
........................................................................................................GTCAGCAACTTGACTCCAGCAA..........................................................	22	1	5.00	1.00	0.00	4.00
.............................................CCTGGAATTAAGTTAACTGTGTAGCC.................................................................................................................	26	1	5.00	2.00	2.00	1.00
........................................................................................................GTCAGCAACTCGATTCCAGCA...........................................................	21	1	5.00	0.00	0.00	5.00
........................................................................................................GTCAGCAACTTGATTCCA..............................................................	18	1	5.00	0.00	0.00	5.00
.............................................CCTGGAATTAAGTTGACTGCGTAGCC.................................................................................................................	26	1	5.00	2.00	1.00	2.00
........................................................................................................GTCAGCAATTTGATTCCAGCA...........................................................	21	1	5.00	0.00	1.00	4.00
........................................................................................................CTCAGCAACTTGATTCCAGCA...........................................................	21	1	5.00	0.00	0.00	5.00
.............................................CCTGGAATTAAGTTGACTTTGTAGCC.................................................................................................................	26	1	5.00	4.00	0.00	1.00
..........................................................................................................CAGCAACTTGATTCCAGCAA..........................................................	20	1	5.00	1.00	2.00	2.00
...........................................................................................................GTCAACTTGATTCCAGCA...........................................................	18	2	2.50	0.00	0.00	2.50
.............................................CCTGGAATTAAGTTGACTGTGCAGC..................................................................................................................	25	1	5.00	2.00	0.00	3.00
..............................................CCTGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	5.00	0.00	2.00	3.00
..........................................................................................................CAGCAACTTGATTCCAGCA...........................................................	19	1	5.00	0.00	0.00	5.00
........................................................................................................GTCAGCAACTTGATTCTAGCAA..........................................................	22	1	5.00	1.00	1.00	3.00

droYak2

---------------------ATAATGGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAA--------------------------------TATTCCGCAACAATG	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
.............................................CCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	24887.00	13.00	144.00	110.00	418.00	24202.00
.............................................CCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	18693.00	13.00	187.00	306.00	610.00	17577.00
........................................................................................................GTCAGCAACTTGATTCCAGCAA..........................................................	22	1	3489.00	71.00	578.00	243.00	1138.00	1459.00
........................................................................................................GTCAGCAACTTGATTCCAGCA...........................................................	21	1	3104.00	32.00	732.00	98.00	1383.00	859.00
.............................................CCTGGAATTAAGTTGACTGTGTAG...................................................................................................................	24	1	1346.00	1.00	40.00	47.00	164.00	1094.00
........................................................................................................GTCAGCAACTTGATTCCAGC............................................................	20	1	1133.00	0.00	15.00	2.00	37.00	1079.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCT................................................................................................................	27	1	1075.00	0.00	0.00	6.00	24.00	1045.00
........................................................................................................GTCAGCAACTTGATTCCAGCAC..........................................................	22	1	636.00	0.00	9.00	2.00	53.00	572.00
.............................................CCTGGAATTAAGTTGACTGTGT.....................................................................................................................	22	1	507.00	0.00	31.00	20.00	117.00	339.00
.............................................CCTGGAATTAAGTTGACTGTGTAGAC.................................................................................................................	26	1	505.00	0.00	0.00	0.00	0.00	505.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCT.................................................................................................................	26	1	312.00	0.00	0.00	1.00	1.00	310.00
.............................................CCTGGAATTAAGTTGACTG........................................................................................................................	19	1	153.00	0.00	1.00	3.00	1.00	148.00
.............................................CCTGGAATTAAGTTGACTGTG......................................................................................................................	21	1	140.00	0.00	26.00	5.00	78.00	31.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCC................................................................................................................	27	1	134.00	0.00	0.00	0.00	1.00	133.00
........................................................................................................GTCAGCAACTTGATTCCAGCAT..........................................................	22	1	131.00	1.00	25.00	13.00	36.00	56.00
.............................................CCTGGAATTAAGTTGACTGTTTAGCC.................................................................................................................	26	1	102.00	0.00	1.00	0.00	2.00	99.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAA.........................................................	23	1	96.00	1.00	14.00	8.00	39.00	34.00
.............................................CCTGGAATTAAGTTGACTTTGTAGCC.................................................................................................................	26	1	93.00	0.00	0.00	0.00	4.00	89.00
..........................GGGTGATTGCGTTGCAGTT...........................................................................................................................................	19	1	88.00	8.00	23.00	10.00	43.00	4.00
.............................................CCTGGAATTAAGTTGACTGTGTA....................................................................................................................	23	1	82.00	0.00	7.00	6.00	19.00	50.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAT.........................................................	23	1	68.00	0.00	3.00	0.00	9.00	56.00
.............................................CCTGGAATTAAGTTGACTGTGC.....................................................................................................................	22	1	65.00	0.00	0.00	0.00	0.00	65.00
........................................................................................................GTCAGCAACTTGATTCCAGCT...........................................................	21	1	61.00	0.00	16.00	0.00	21.00	24.00
.............................................CCTGGAATTAAGTTGACTGTGG.....................................................................................................................	22	1	59.00	0.00	0.00	0.00	0.00	59.00
.............................................CCTGGAATTAAGTTGACTGTGTGG...................................................................................................................	24	1	55.00	0.00	0.00	0.00	1.00	54.00
.............................................CCTGGAATTAATTTGACTGTGTAGCC.................................................................................................................	26	1	52.00	0.00	0.00	0.00	0.00	52.00
.............................................CCTGGAATTAAGTTGACTGTTTAGC..................................................................................................................	25	1	46.00	0.00	4.00	0.00	10.00	32.00
........................................................................................................GTCAGCAACTTGATTCCAGCCA..........................................................	22	1	46.00	1.00	16.00	1.00	24.00	4.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCG................................................................................................................	27	1	46.00	0.00	0.00	0.00	0.00	46.00
.............................................CCTGGAATTAAGTTGACTGTGTAAC..................................................................................................................	25	1	44.00	0.00	0.00	0.00	0.00	44.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCTT...............................................................................................................	28	1	44.00	0.00	0.00	0.00	1.00	43.00
.............................................CCTGGAATTAAGTTGACTGTGTAGA..................................................................................................................	25	1	44.00	0.00	0.00	2.00	3.00	39.00
........................................................................................................GTCAGCAACTTGATTCCAGCC...........................................................	21	1	43.00	1.00	5.00	0.00	26.00	11.00
...........................GGTGATTGCGTTGCAGTT...........................................................................................................................................	18	1	39.00	5.00	12.00	1.00	20.00	1.00
.............................................CCTGGAATTAAGTTGACxxTGTAGCC.................................................................................................................	24	1	38.00	0.00	0.00	0.00	0.00	38.00
.............................................CCTGGAATTAAGTTGACTGT.......................................................................................................................	20	1	36.00	0.00	1.00	2.00	7.00	26.00
.............................................CCTGGAATTAAGTTGACTGTxTAGCC.................................................................................................................	25	1	35.00	0.00	0.00	0.00	0.00	35.00
.............................................CCTGAAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	35.00	0.00	0.00	0.00	0.00	35.00
.............................................CCTGGAATTAAGTTGACTGGGTAGCC.................................................................................................................	26	1	34.00	0.00	0.00	0.00	0.00	34.00
.............................................CCTGGAATTAAGTTGACTGTGTATC..................................................................................................................	25	1	34.00	0.00	8.00	1.00	25.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAA...................................................................................................................	24	1	33.00	0.00	1.00	1.00	3.00	28.00
........................................................................................................GTCAGCAACTTGCTTCCAGCA...........................................................	21	1	32.00	0.00	7.00	0.00	25.00	0.00
..............................................CTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	29.00	0.00	2.00	0.00	1.00	26.00
........................................................................................................GTCAGCAACTTGATTCCAGCG...........................................................	21	1	29.00	0.00	1.00	0.00	4.00	24.00
........................................................................................................GTCAGCAACTTGATTCCAG.............................................................	19	1	29.00	0.00	5.00	1.00	5.00	18.00
.............................................CCTTGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	28.00	0.00	0.00	0.00	0.00	28.00
.............................................CCTGGAATTAAGTTGACTGTGCAGC..................................................................................................................	25	1	28.00	0.00	0.00	1.00	8.00	19.00
.............................................CCTCGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	28.00	0.00	0.00	0.00	0.00	28.00
........................................................................................................GTCAGCAACTTGATTCCAGCAG..........................................................	22	1	27.00	0.00	1.00	0.00	3.00	23.00
.............................................CCTGGAATTAAGTTGACTGTGTAGG..................................................................................................................	25	1	27.00	1.00	0.00	0.00	0.00	26.00
.............................................CCTGGAATTAAGTTGACTGCGTAGCC.................................................................................................................	26	1	26.00	0.00	0.00	0.00	2.00	24.00
...................................................ATTAAGTTGACTGTGTAGCC.................................................................................................................	20	1	26.00	0.00	0.00	1.00	0.00	25.00
.............................................CCTTGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	25.00	0.00	0.00	0.00	1.00	24.00
.............................................CCTGGAATTAAGTTGACTGCGTAGC..................................................................................................................	25	1	25.00	1.00	0.00	0.00	0.00	24.00
.............................................CCTGGAATTAAGTTGACTGGGTAGC..................................................................................................................	25	1	25.00	0.00	0.00	0.00	1.00	24.00
........................................................................................................GGCAGCAACTTGATTCCAGCA...........................................................	21	1	25.00	0.00	3.00	0.00	21.00	1.00
.............................................CCTGGGATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	24.00	0.00	2.00	0.00	15.00	7.00
.............................................CCTGGAATTAAGTTGGCTGTGTAGC..................................................................................................................	25	1	24.00	0.00	0.00	1.00	2.00	21.00
.............................................CCTGGAATTAAGTTGACTTTGTAGC..................................................................................................................	25	1	23.00	0.00	0.00	1.00	1.00	21.00
.............................................CCTGGAATTAAGTTGACTTTGTAG...................................................................................................................	24	1	23.00	0.00	0.00	1.00	1.00	21.00
.............................................CCTGGAATTAAGTTGACTGTGTAC...................................................................................................................	24	1	23.00	0.00	0.00	0.00	1.00	22.00
........................................................................................................GTCAGCAACTTxATTCCAGC............................................................	19	1	22.00	0.00	0.00	0.00	0.00	22.00
........................................................................................................GTCAGCAACTTGATTCCCGCA...........................................................	21	1	22.00	0.00	4.00	0.00	18.00	0.00
........................................................................................................GTCAGCAACTTGATTCCCGCAA..........................................................	22	1	21.00	0.00	5.00	0.00	15.00	1.00
.............................................CCTGGAATTAAGTTGACTGTCTAGCC.................................................................................................................	26	1	21.00	0.00	0.00	0.00	0.00	21.00
..............................................CTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	21.00	0.00	0.00	1.00	1.00	19.00
.............................................CCTGGAATTAAGTTGACTGTGCAGCC.................................................................................................................	26	1	20.00	0.00	0.00	0.00	3.00	17.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCA.................................................................................................................	26	1	20.00	0.00	0.00	2.00	0.00	18.00
.............................................CCTGCAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	20.00	0.00	0.00	0.00	0.00	20.00
.............................................CCTGGAATTAAGTTGACTGTGTGAC..................................................................................................................	25	1	19.00	0.00	0.00	0.00	0.00	19.00
.............................................CCTGGAATTAAGTTGACTGTGTATCC.................................................................................................................	26	1	19.00	0.00	2.00	0.00	13.00	4.00
........................................................................................................GTCAGCAACTTGATTCCATCA...........................................................	21	1	18.00	0.00	4.00	0.00	13.00	1.00
........................................................................................................GTCAGCAACTTTATTCCAGC............................................................	20	1	18.00	0.00	0.00	0.00	0.00	18.00
.............................................CCTGGACTTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	18.00	0.00	1.00	0.00	2.00	15.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCA................................................................................................................	27	1	17.00	0.00	0.00	0.00	1.00	16.00
.............................................CCTGGAATTAAGTTGGCTGTGTAGCC.................................................................................................................	26	1	17.00	0.00	0.00	0.00	0.00	17.00
.............................................CCTCGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	17.00	0.00	0.00	0.00	0.00	17.00
........................................................................................................GTCAGCAACTTGCTTCCAGCAA..........................................................	22	1	17.00	0.00	0.00	0.00	17.00	0.00
.........................TGGGTGATTGCGTTGCAGTT...........................................................................................................................................	20	1	17.00	1.00	7.00	6.00	3.00	0.00
.............................................CCTGGCATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	17.00	1.00	0.00	0.00	10.00	6.00
.............................................CCTGGAATTAAGTTTACTGTGTAGCC.................................................................................................................	26	1	16.00	0.00	0.00	0.00	0.00	16.00
..................................................AATTAAGTTGACTGTGTAGCC.................................................................................................................	21	1	16.00	0.00	0.00	0.00	1.00	15.00
.............................................CCTGGAATTAAGTTGACTCTGTAGCC.................................................................................................................	26	1	16.00	0.00	0.00	0.00	1.00	15.00
...................................................ATTAAGTTGACTGTGTAGC..................................................................................................................	19	1	16.00	0.00	0.00	2.00	0.00	14.00
........................................................................................................GTCAGCAACTTGATTCCAGCACC.........................................................	23	1	16.00	0.00	0.00	0.00	0.00	16.00
........................................................................................................GGCAGCAACTTGATTCCAGCAA..........................................................	22	1	16.00	0.00	3.00	0.00	13.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAATT........................................................	24	1	16.00	0.00	1.00	0.00	0.00	15.00
...........................................................................................................AGCAACTTGATTCCAGCA...........................................................	18	1	16.00	0.00	6.00	0.00	10.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTGGCC.................................................................................................................	26	1	15.00	0.00	0.00	0.00	0.00	15.00
.............................................CCCGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	15.00	0.00	0.00	0.00	0.00	15.00
.............................................CCCGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	15.00	0.00	0.00	0.00	2.00	13.00
..............................................CCTGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	14.00	0.00	0.00	0.00	0.00	14.00
........................................................................................................GCCAGCAACTTGATTCCAGCA...........................................................	21	1	14.00	0.00	2.00	0.00	12.00	0.00
.............................................CCTGGGATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	14.00	0.00	1.00	0.00	4.00	9.00
.............................................CCTGGAATTAAGTTGACTGTCTAGC..................................................................................................................	25	1	13.00	0.00	0.00	0.00	1.00	12.00
.............................................CCTGGAATTAAGTTGACTGTGTAGTC.................................................................................................................	26	1	13.00	1.00	1.00	0.00	2.00	9.00
............................................TCCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	26	1	13.00	0.00	0.00	0.00	1.00	12.00
.............................................CCTGGAATTAAGTTGACTGTATAGCC.................................................................................................................	26	1	13.00	0.00	1.00	1.00	0.00	11.00
.............................................CCTGGAATTAAGCTGACTGTGTAGC..................................................................................................................	25	1	13.00	0.00	0.00	1.00	1.00	11.00
.............................................CCTGGAATTAAGTTGACTGTGTAT...................................................................................................................	24	1	13.00	0.00	2.00	0.00	5.00	6.00
.............................................CCTGGAATTAAGTTGACTGTGTAGT..................................................................................................................	25	1	12.00	1.00	2.00	0.00	1.00	8.00

droEre2

---------------------TTAATGGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGTACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAA--------------------------------TATTCCGCAACAATG	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
........................................................................................................GTCAGCAACTTGATTCCAGCA...........................................................	21	1	12410.00	66.00	1027.00	21.00	11296.00
........................................................................................................GTCAGCAACTTGATTCCAGCAA..........................................................	22	1	5439.00	143.00	941.00	50.00	4305.00
.............................................CCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	3599.00	43.00	304.00	43.00	3209.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	2857.00	29.00	210.00	23.00	2595.00
.............................................CCTGGAATTAAGTTGACTGTG......................................................................................................................	21	1	553.00	0.00	94.00	0.00	459.00
.............................................CCTGGAATTAAGTTGACTGTGTAG...................................................................................................................	24	1	501.00	1.00	79.00	2.00	419.00
...........................GGTGATTGCGTTGCAGTT...........................................................................................................................................	18	1	219.00	13.00	5.00	0.00	201.00
........................................................................................................GTCAGCAACTTGATTCCAGC............................................................	20	1	213.00	3.00	22.00	0.00	188.00
..........................GGGTGATTGCGTTGCAGTT...........................................................................................................................................	19	1	204.00	8.00	25.00	0.00	171.00
.............................................CCTGGAATTAAGTTGACTGTGT.....................................................................................................................	22	1	178.00	0.00	33.00	0.00	145.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCT................................................................................................................	27	1	161.00	0.00	8.00	0.00	153.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAA.........................................................	23	1	130.00	3.00	28.00	2.00	97.00
........................................................................................................GTCAGAAACTTGATTCCAGCA...........................................................	21	1	110.00	0.00	0.00	0.00	110.00
........................................................................................................GTCAGCAACTTGATTCCATCA...........................................................	21	1	101.00	1.00	12.00	1.00	87.00
........................................................................................................GTCAGCAACTTGATTCCAGCAT..........................................................	22	1	97.00	1.00	29.00	2.00	65.00
........................................................................................................GTCATCAACTTGATTCCAGCA...........................................................	21	1	88.00	0.00	1.00	0.00	87.00
........................................................................................................GTCAGCAACTTGATTCCAGCAC..........................................................	22	1	83.00	1.00	27.00	0.00	55.00
.............................................CCTGGAATTAAGTTGACTGT.......................................................................................................................	20	1	81.00	0.00	6.00	0.00	75.00
........................................................................................................GTCAGCAACTTTATTCCAGCA...........................................................	21	1	80.00	0.00	1.00	0.00	79.00
........................................................................................................GTCAGCAACTTGATTCCAG.............................................................	19	1	77.00	0.00	3.00	0.00	74.00
........................................................................................................GTAAGCAACTTGATTCCAGCA...........................................................	21	1	71.00	0.00	2.00	0.00	69.00
........................................................................................................GTCAGCAACTTGATTCAAGCA...........................................................	21	1	62.00	0.00	1.00	0.00	61.00
.............................................CCTGGAATTAAGTTGACTGTGTA....................................................................................................................	23	1	60.00	0.00	25.00	0.00	35.00
.............................................CATGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	58.00	0.00	0.00	0.00	58.00
........................................................................................................GTCAGAAACTTGATTCCAGCAA..........................................................	22	1	49.00	0.00	0.00	0.00	49.00
.............................................CCTGGAATTAAGTTGACTGTGTCGC..................................................................................................................	25	1	48.00	0.00	0.00	1.00	47.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAT.........................................................	23	1	47.00	0.00	6.00	0.00	41.00
........................................................................................................GTCAGCAACTTGATTCCATCAA..........................................................	22	1	46.00	4.00	7.00	0.00	35.00
........................................................................................................GTCAGCAACTTGATTCCAGAA...........................................................	21	1	45.00	0.00	2.00	0.00	43.00
........................................................................................................GTCAGCAACTTGATTACAGCA...........................................................	21	1	45.00	0.00	2.00	0.00	43.00
.............................................CATGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	44.00	0.00	0.00	0.00	44.00
........................................................................................................TTCAGCAACTTGATTCCAGCA...........................................................	21	1	41.00	0.00	1.00	0.00	40.00
.........................................................................................................TCAGCAACTTGATTCCAGCA...........................................................	20	1	39.00	0.00	1.00	0.00	38.00
........................................................................................................GTCAGCAACTTGATTCCAGCT...........................................................	21	1	36.00	0.00	7.00	0.00	29.00
.............................................CCTGGAATTAAGTTGACTGTGTTGC..................................................................................................................	25	1	35.00	0.00	0.00	0.00	35.00
...........................................................................................................AGCAACTTGATTCCAGCA...........................................................	18	1	34.00	0.00	2.00	0.00	32.00
.............................................CCTGGAATTAAGTTGACTGTGTATCC.................................................................................................................	26	1	33.00	2.00	5.00	2.00	24.00
.............................................ACTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	32.00	0.00	0.00	0.00	32.00
........................................................................................................GTCAGCAAATTGATTCCAGCA...........................................................	21	1	32.00	0.00	1.00	0.00	31.00
.............................................CCTGGAATTAAGTTGACTGTGTCGCC.................................................................................................................	26	1	32.00	0.00	1.00	0.00	31.00
........................................................................................................GTCAGCAACTTTATTCCAGCAA..........................................................	22	1	31.00	0.00	0.00	0.00	31.00
.............................................CCTGGAATTAAGTTGACTGTGTATC..................................................................................................................	25	1	31.00	2.00	9.00	2.00	18.00
..............................................CTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	31.00	2.00	1.00	0.00	28.00
.............................................CCTGGAATTAAGTTGACTG........................................................................................................................	19	1	30.00	0.00	1.00	0.00	29.00
........................................................................................................GTCATCAACTTGATTCCAGCAA..........................................................	22	1	30.00	0.00	0.00	0.00	30.00
........................................................................................................GTCAGCAACTTGCTTCCAGCA...........................................................	21	1	30.00	0.00	8.00	0.00	22.00
.............................................CCTGGAATTAAGTTTACTGTGTAGC..................................................................................................................	25	1	29.00	0.00	1.00	1.00	27.00
........................................................................................................GTAAGCAACTTGATTCCAGCAA..........................................................	22	1	28.00	1.00	0.00	0.00	27.00
........................................................................................................GCCAGCAACTTGATTCCAGCA...........................................................	21	1	28.00	0.00	4.00	0.00	24.00
.............................................CCTTGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	27.00	0.00	0.00	0.00	27.00
.............................................CCTTGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	27.00	0.00	0.00	0.00	27.00
........................................................................................................GTCAGCAACTTGATTACAGCAA..........................................................	22	1	26.00	0.00	3.00	0.00	23.00
.............................................ACTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	26.00	0.00	0.00	0.00	26.00
........................................................................................................GTCAGCAACTTGATTCCAGCC...........................................................	21	1	25.00	0.00	9.00	0.00	16.00
.............................................CCTGGAATTAAGTTGACTGTGTGGC..................................................................................................................	25	1	24.00	0.00	0.00	0.00	24.00
.............................................CCTGGAATTAAGTTGACTGTGTGGCC.................................................................................................................	26	1	23.00	0.00	0.00	0.00	23.00
.........................................................................................................TCAGCAACTTGATTCCAGCAATT........................................................	23	1	23.00	1.00	0.00	0.00	22.00
........................................................................................................GTCAGCAACTTGATTCCAGAAA..........................................................	22	1	21.00	0.00	0.00	0.00	21.00
........................................................................................................GTCAGCAACTTGATTCAAGCAA..........................................................	22	1	21.00	1.00	3.00	0.00	17.00
........................................................................................................GTGAGCAACTTGATTCCAGCA...........................................................	21	1	20.00	1.00	0.00	0.00	19.00
........................................................................................................GTTAGCAACTTGATTCCAGCA...........................................................	21	1	20.00	0.00	0.00	0.00	20.00
..............................................CTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	19.00	0.00	2.00	0.00	17.00
........................................................................................................ATCAGCAACTTGATTCCAGCA...........................................................	21	1	19.00	0.00	0.00	0.00	19.00
........................................................................................................GTCAGCAACTTGATCCCAGCA...........................................................	21	1	19.00	1.00	0.00	0.00	18.00
.........................TGGGTGATTGCGTTGCAGTT...........................................................................................................................................	20	1	19.00	0.00	2.00	0.00	17.00
.........................................................................................................TCAGCAACTTGATTCCAGCAA..........................................................	21	1	19.00	0.00	2.00	0.00	17.00
.............................................CCTGTAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	18.00	0.00	0.00	0.00	18.00
........................................................................................................GTCAGCAACTTGATTCCAGCAG..........................................................	22	1	18.00	1.00	1.00	0.00	16.00
........................................................................................................GTCAGCAACTCGATTCCAGCA...........................................................	21	1	17.00	1.00	1.00	0.00	15.00
........................................................................................................GTCAGCAACTTGATTCCCGCAA..........................................................	22	1	16.00	1.00	9.00	0.00	6.00
........................................................................................................GTCGGCAACTTGATTCCAGCA...........................................................	21	1	16.00	0.00	1.00	0.00	15.00
...........................................................................................................AGCAACTTGATTCCAGCAA..........................................................	19	1	15.00	0.00	6.00	0.00	9.00
.............................................CCTGGAATTAAGTTGACTGTGTAGA..................................................................................................................	25	1	15.00	0.00	2.00	0.00	13.00
........................................................................................................GTCAGCAACTTGCTTCCAGCAA..........................................................	22	1	15.00	1.00	9.00	0.00	5.00
........................................................................................................GTCAGCAACTTGATTCCAGCCA..........................................................	22	1	15.00	6.00	7.00	1.00	1.00
........................................................................................................TTCAGCAACTTGATTCCAGCAA..........................................................	22	1	14.00	0.00	2.00	1.00	11.00
........................................................................................................GTCAGCAACTTGATTCTAGCA...........................................................	21	1	14.00	0.00	3.00	0.00	11.00
........................................................................................................GTCAGCAACTTGATTCCCGCA...........................................................	21	1	14.00	1.00	6.00	0.00	7.00
.............................................CCTGGAATTAAGTTTACTGTGTAGCC.................................................................................................................	26	1	13.00	0.00	0.00	0.00	13.00
........................................................................................................GTCAGCAACTTGACTCCAGCAA..........................................................	22	1	13.00	1.00	2.00	0.00	10.00
.............................................CCTGGAATTAAGTTGACTTTGTAGCC.................................................................................................................	26	1	13.00	0.00	1.00	1.00	11.00
........................................................................................................GTCAGCAACTTGATTCCACCA...........................................................	21	1	13.00	0.00	5.00	0.00	8.00
........................................................................................................GTCAGCAACTTGATTCCAGCG...........................................................	21	1	13.00	0.00	1.00	0.00	12.00
.............................................CCTGTAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	13.00	0.00	0.00	0.00	13.00
.............................................CCTGGAATTAAGTTGACTTTGTAGC..................................................................................................................	25	1	12.00	0.00	0.00	0.00	12.00
........................................................................................................GTCAGCAGCTTGATTCCAGCA...........................................................	21	1	12.00	0.00	0.00	0.00	12.00
........................................................................................................GTCAGCAACTTAATTCCAGCA...........................................................	21	1	12.00	0.00	4.00	0.00	8.00
.............................................CCTGGAATTAAGTTGAATGTGTAGC..................................................................................................................	25	1	12.00	0.00	0.00	0.00	12.00
.............................................CCTGGAATTAAGTTGAATGTGTAGCC.................................................................................................................	26	1	12.00	0.00	0.00	0.00	12.00
...........................................TTCCTGGAATTAAGTTGACTGTG......................................................................................................................	23	1	12.00	0.00	0.00	0.00	12.00
........................................................................................................GTCAGCAACTTGGTTCCAGCA...........................................................	21	1	12.00	0.00	2.00	0.00	10.00
........................................................................................................GTCAGCAACTTGACTCCAGCA...........................................................	21	1	12.00	0.00	0.00	0.00	12.00
.............................................CATGGAATTAAGTTGACTGTG......................................................................................................................	21	1	11.00	0.00	0.00	0.00	11.00
..........................................................................................................CAGCAACTTGATTCCAGCAA..........................................................	20	1	11.00	0.00	0.00	0.00	11.00
.............................................CCTGGAATTAATTTGACTGTGTAGCC.................................................................................................................	26	1	11.00	0.00	0.00	0.00	11.00
........................................................................................................GTCAGCAAATTGATTCCAGCAA..........................................................	22	1	11.00	0.00	3.00	0.00	8.00
........................................................................................................ATCAGCAACTTGATTCCAGCAA..........................................................	22	1	11.00	0.00	0.00	0.00	11.00
........................................................................................................GTCAGCACCTTGATTCCAGCA...........................................................	21	1	11.00	0.00	3.00	0.00	8.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAAA........................................................	24	1	11.00	0.00	2.00	0.00	9.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCA.................................................................................................................	26	1	11.00	0.00	1.00	0.00	10.00
........................................................................................................GTCAGCAACTTGATTCCGGCA...........................................................	21	1	11.00	0.00	0.00	0.00	11.00

droAna3

---------------------ACAAAAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGG-CAAGGCTTGAGAACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAGTACAGCAGAAAGAGCCGTGAACCGTGTTCAATATGCCACGACAATG	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
........................................................................................................GTCAGCAACTTGATTCCAGCA...........................................................	21	1	10156.00	145.00	9172.00	823.00	16.00
........................................................................................................GTCAGCAACTTGATTCCAGCAA..........................................................	22	1	2720.00	165.00	1940.00	589.00	26.00
.............................................CCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	2083.00	570.00	1114.00	395.00	4.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	1988.00	334.00	1150.00	504.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAG...................................................................................................................	24	1	315.00	100.00	96.00	119.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGT.....................................................................................................................	22	1	280.00	65.00	80.00	135.00	0.00
.............................................CCTGGAATTAAGTTGACTGTG......................................................................................................................	21	1	227.00	28.00	89.00	109.00	1.00
........................................................................................................GTCAGCAACTTGATTCCAGC............................................................	20	1	207.00	2.00	190.00	15.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCT................................................................................................................	27	1	131.00	13.00	89.00	29.00	0.00
........................................................................................................GTCAGCAACTTGATTCCATCA...........................................................	21	1	122.00	0.00	118.00	4.00	0.00
..........................AGGCAATTGCGTTGCAGTT...........................................................................................................................................	19	1	120.00	4.00	76.00	40.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCT...........................................................	21	1	95.00	5.00	60.00	30.00	0.00
........................................................................................................GTCAGAAACTTGATTCCAGCA...........................................................	21	1	88.00	0.00	79.00	9.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAT..........................................................	22	1	83.00	17.00	45.00	19.00	2.00
........................................................................................................GTCAGCAACTTGATTCCAG.............................................................	19	1	81.00	0.00	78.00	3.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAA.........................................................	23	1	80.00	7.00	49.00	21.00	3.00
.............................................CCTGGAATTAAGTTGACTGTGTA....................................................................................................................	23	1	72.00	27.00	24.00	21.00	0.00
.........................................................................................................TCAGCAACTTGATTCCAGCA...........................................................	20	1	64.00	1.00	62.00	1.00	0.00
........................................................................................................GTCATCAACTTGATTCCAGCA...........................................................	21	1	54.00	0.00	53.00	0.00	1.00
........................................................................................................GTCAGCAACTTGATTCCAGAA...........................................................	21	1	46.00	0.00	44.00	2.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAT.........................................................	23	1	46.00	1.00	43.00	2.00	0.00
........................................................................................................GTCAGCAACTTTATTCCAGCA...........................................................	21	1	41.00	1.00	38.00	2.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTATC..................................................................................................................	25	1	40.00	7.00	22.00	11.00	0.00
........................................................................................................GTCAGCAACTTGATTACAGCA...........................................................	21	1	39.00	1.00	35.00	3.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAC..........................................................	22	1	30.00	1.00	16.00	13.00	0.00
.............................................CCTGGAATTAAGTTGACTGT.......................................................................................................................	20	1	30.00	8.00	4.00	18.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAG..........................................................	22	1	29.00	0.00	22.00	7.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCG...........................................................	21	1	29.00	2.00	27.00	0.00	0.00
........................................................................................................GGCAGCAACTTGATTCCAGCA...........................................................	21	1	29.00	1.00	6.00	22.00	0.00
........................................................................................................GTGAGCAACTTGATTCCAGCA...........................................................	21	1	26.00	0.00	23.00	3.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTATCC.................................................................................................................	26	1	26.00	2.00	15.00	9.00	0.00
........................................................................................................GTCAGCAACTTGATTCAAGCA...........................................................	21	1	24.00	0.00	24.00	0.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCC...........................................................	21	1	23.00	1.00	16.00	5.00	1.00
........................................................................................................GTAAGCAACTTGATTCCAGCA...........................................................	21	1	22.00	1.00	19.00	2.00	0.00
........................................................................................................GCCAGCAACTTGATTCCAGCA...........................................................	21	1	21.00	1.00	13.00	7.00	0.00
........................................................................................................GACAGCAACTTGATTCCAGCA...........................................................	21	1	21.00	0.00	11.00	10.00	0.00
........................................................................................................GTCAGCAACTTGATTCCGGCA...........................................................	21	1	18.00	0.00	17.00	1.00	0.00
.............................................ACTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	17.00	3.00	10.00	4.00	0.00
........................................................................................................TTCAGCAACTTGATTCCAGCA...........................................................	21	1	17.00	0.00	16.00	1.00	0.00
........................................................................................................GTCAGAAACTTGATTCCAGCAA..........................................................	22	1	17.00	1.00	13.00	3.00	0.00
...........................................................................................................AGCAACTTGATTCCAGCA...........................................................	18	1	17.00	1.00	7.00	8.00	1.00
........................................................................................................GTCAGCAACTCGATTCCAGCA...........................................................	21	1	16.00	1.00	11.00	4.00	0.00
.............................................CCTGGAATTAAGTTGACTGTATAGC..................................................................................................................	25	1	15.00	4.00	11.00	0.00	0.00
........................................................................................................GTCAGCAACTTGATTCCATCAA..........................................................	22	1	15.00	0.00	12.00	3.00	0.00
.............................................ACTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	15.00	1.00	6.00	8.00	0.00
.........................................................................................................TCAGCAACTTGATTCCAGCAA..........................................................	21	1	15.00	0.00	13.00	2.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCTT..........................................................	22	1	15.00	1.00	11.00	3.00	0.00
.............................................CCTGGAATTAAGTTGACTGTCTAGC..................................................................................................................	25	1	14.00	9.00	5.00	0.00	0.00
........................................................................................................GTCAGCAGCTTGATTCCAGCA...........................................................	21	1	14.00	0.00	11.00	3.00	0.00
.............................................CATGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	14.00	3.00	9.00	2.00	0.00
.............................................CCTGGAATTAAGTTGACTG........................................................................................................................	19	1	14.00	4.00	6.00	4.00	0.00
........................................................................................................GTTAGCAACTTGATTCCAGCA...........................................................	21	1	13.00	0.00	13.00	0.00	0.00
........................................................................................................GTCAGCAACTTGATCCCAGCA...........................................................	21	1	12.00	0.00	7.00	5.00	0.00
........................................................................................................GGCAGCAACTTGATTCCAGCAA..........................................................	22	1	12.00	0.00	1.00	10.00	1.00
.............................................CCTGGAATTAAGTTTACTGTGTAGCC.................................................................................................................	26	1	11.00	0.00	10.00	1.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGT............................................................	20	1	11.00	1.00	10.00	0.00	0.00
........................................................................................................GTCATCAACTTGATTCCAGCAA..........................................................	22	1	11.00	0.00	10.00	1.00	0.00
........................................................................................................GTAAGCAACTTGATTCCAGCAA..........................................................	22	1	11.00	2.00	4.00	5.00	0.00
........................................................................................................GTCAGCAACTTGGTTCCAGCA...........................................................	21	1	11.00	1.00	8.00	2.00	0.00
.............................................CATGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	11.00	0.00	6.00	5.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAATT........................................................	24	1	11.00	1.00	9.00	1.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCTA..........................................................	22	1	11.00	3.00	6.00	1.00	1.00
........................................................................................................GTCAGCAACTTGCTTCCAGCAA..........................................................	22	1	10.00	2.00	2.00	6.00	0.00
........................................................................................................GTCAGCAACTTGATTTCAGCA...........................................................	21	1	10.00	1.00	8.00	1.00	0.00
........................................................................................................GTCGGCAACTTGATTCCAGCA...........................................................	21	1	10.00	0.00	10.00	0.00	0.00
........................................................................................................GCCAGCAACTTGATTCCAGCAA..........................................................	22	1	10.00	0.00	6.00	4.00	0.00
........................................................................................................GTCAGAAACTTGATTCCAGAA...........................................................	21	1	9.00	0.00	9.00	0.00	0.00
........................................................................................................GTCAGTAACTTGATTCCAGCA...........................................................	21	1	9.00	0.00	6.00	3.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGCAGC..................................................................................................................	25	1	9.00	1.00	3.00	5.00	0.00
........................................................................................................GTCAGCAACCTGATTCCAGCA...........................................................	21	1	9.00	0.00	9.00	0.00	0.00
........................................................................................................GTCAGCAAATTGATTCCAGCAA..........................................................	22	1	9.00	0.00	1.00	8.00	0.00
........................................................................................................GTCAGCAACTTGATTCTAGCA...........................................................	21	1	9.00	0.00	6.00	3.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGAAA..........................................................	22	1	9.00	0.00	8.00	1.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCT.................................................................................................................	26	1	9.00	3.00	2.00	4.00	0.00
.............................................CCGGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	9.00	0.00	8.00	1.00	0.00
........................................................................................................GTCAGCAACTTGCTTCCAGCA...........................................................	21	1	9.00	0.00	3.00	6.00	0.00
.............................................CCTGTAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	8.00	1.00	7.00	0.00	0.00
.............................................CCGGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	8.00	0.00	6.00	2.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGCAGCC.................................................................................................................	26	1	8.00	1.00	4.00	3.00	0.00
.........................AAGGCAATTGCGTTGCAGTT...........................................................................................................................................	20	1	8.00	1.00	4.00	3.00	0.00
........................................................................................................GTGAGCAACTTGATTCCAGCAA..........................................................	22	1	8.00	0.00	8.00	0.00	0.00
........................................................................................................ATCAGCAACTTGATTCCAGCA...........................................................	21	1	8.00	0.00	7.00	1.00	0.00
.............................................CCTGGAATTAAGTTGACTGTATAGCC.................................................................................................................	26	1	8.00	3.00	5.00	0.00	0.00
........................................................................................................GTCACCAACTTGATTCCAGCAA..........................................................	22	1	8.00	1.00	5.00	2.00	0.00
.............................................CCTGGAATTAAGTTGACTGTCTAGCC.................................................................................................................	26	1	8.00	1.00	5.00	1.00	1.00
........................................................................................................GTCAGCAACTTGATTCCAGCCA..........................................................	22	1	8.00	2.00	4.00	1.00	1.00
.............................................CCTGGAATTAAGTTTACTGTGTAGC..................................................................................................................	25	1	8.00	2.00	6.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTT....................................................................................................................	23	1	8.00	3.00	4.00	1.00	0.00
.............................................CCTGGGATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	8.00	0.00	1.00	7.00	0.00
........................................................................................................GTCAGCAACTTGATTCCGGCAA..........................................................	22	1	8.00	0.00	4.00	4.00	0.00
.............................................CCTTGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	7.00	2.00	5.00	0.00	0.00
........................................................................................................GTCAGCAAATTGATTCCAGCA...........................................................	21	1	7.00	0.00	1.00	6.00	0.00
........................................................................................................GTCAGCAACTTGATTCCACCA...........................................................	21	1	7.00	0.00	1.00	6.00	0.00
........................................................................................................GACAGCAACTTGATTCCAGCAA..........................................................	22	1	7.00	0.00	2.00	5.00	0.00
........................................................................................................GTCAGCGACTTGATTCCAGCA...........................................................	21	1	7.00	0.00	7.00	0.00	0.00
........................................................................................................GTCAGCAACTTAATTCCAGCA...........................................................	21	1	7.00	1.00	5.00	1.00	0.00
..........................................................................................................CAGCAACTTGATTCCAGCA...........................................................	19	1	7.00	0.00	7.00	0.00	0.00
........................................................................................................GTCAGCAACTCGATTCCAGCAA..........................................................	22	1	7.00	0.00	7.00	0.00	0.00
........................................................................................................GTCATCAACTTGATTCCATCA...........................................................	21	1	7.00	1.00	6.00	0.00	0.00
.............................................CCTGGAATTAATTTGACTGTGTAGC..................................................................................................................	25	1	7.00	3.00	1.00	2.00	1.00
........................................................................................................GTCACCAACTTGATTCCAGCA...........................................................	21	1	7.00	0.00	7.00	0.00	0.00

dp4

---------------------ATCAGAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGGGAAGG-CAAGGCTTGAGCACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAG------------------------------------CACAACGCTG	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
.............................................CCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	2041.00	493.00	127.00	867.00	554.00
........................................................................................................GTCAGCAACTTGATTCCAGCAA..........................................................	22	1	1653.00	181.00	244.00	1166.00	62.00
.............................................CCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	1317.00	502.00	67.00	423.00	325.00
........................................................................................................GTCAGCAACTTGATTCCAGCA...........................................................	21	1	1118.00	116.00	53.00	928.00	21.00
.............................................CCTGGAATTAAGTTGACTGTGTAG...................................................................................................................	24	1	356.00	113.00	3.00	201.00	39.00
..........................AGGCAATTGCGTTGCAGTT...........................................................................................................................................	19	1	164.00	7.00	6.00	151.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGT.....................................................................................................................	22	1	134.00	29.00	1.00	92.00	12.00
.............................................CCTGGAATTAAGTTGACTGTG......................................................................................................................	21	1	81.00	22.00	0.00	59.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTA....................................................................................................................	23	1	65.00	9.00	1.00	49.00	6.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCT................................................................................................................	27	1	48.00	16.00	0.00	21.00	11.00
........................................................................................................GTCAGCAACTTGATTCCAGC............................................................	20	1	42.00	5.00	0.00	31.00	6.00
........................................................................................................GTCAGCAACTTGATTCCAGCAC..........................................................	22	1	37.00	2.00	2.00	21.00	12.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAA.........................................................	23	1	28.00	4.00	3.00	20.00	1.00
........................................................................................................GTCAGCAACTTGATTCCAGCAT..........................................................	22	1	24.00	3.00	0.00	21.00	0.00
.............................................CCTGGAATTAAGTTGACTGT.......................................................................................................................	20	1	15.00	4.00	0.00	8.00	3.00
........................................................................................................GTCAGCAACTTGATTCCAGCC...........................................................	21	1	13.00	0.00	2.00	11.00	0.00
........................................................................................................GGCAGCAACTTGATTCCAGCAA..........................................................	22	1	13.00	0.00	0.00	13.00	0.00
.............................................CCTGGAATTAAGTTGACTG........................................................................................................................	19	1	12.00	4.00	0.00	3.00	5.00
........................................................................................................GTCAGCAACTTGATTCCAGCT...........................................................	21	1	11.00	0.00	2.00	9.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCCA..........................................................	22	1	11.00	1.00	5.00	5.00	0.00
........................................................................................................GTCAGCAACTTGATTCCCGCA...........................................................	21	1	9.00	0.00	1.00	8.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGCAGCC.................................................................................................................	26	1	9.00	0.00	1.00	7.00	1.00
........................................................................................................GACAGCAACTTGATTCCAGCAA..........................................................	22	1	9.00	1.00	4.00	4.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTCGCC.................................................................................................................	26	1	8.00	1.00	0.00	1.00	6.00
........................................................................................................GTCAGCAACTTGATTCAAGCAA..........................................................	22	1	8.00	0.00	0.00	8.00	0.00
...........................................................................................................AGCAACTTGATTCCAGCAA..........................................................	19	1	8.00	0.00	3.00	5.00	0.00
...........................................................................................................AGCAACTTGATTCCAGCA...........................................................	18	1	8.00	1.00	1.00	6.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGAC.................................................................................................................	26	1	7.00	1.00	1.00	2.00	3.00
..............................................CTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	7.00	5.00	0.00	1.00	1.00
.............................................CCTGGAATTAAGCTGACTGTGTAGCC.................................................................................................................	26	1	7.00	1.00	1.00	5.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTATCC.................................................................................................................	26	1	7.00	0.00	2.00	5.00	0.00
........................................................................................................GGCAGCAACTTGATTCCAGCA...........................................................	21	1	7.00	0.00	0.00	7.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGT..................................................................................................................	25	1	6.00	2.00	2.00	2.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGA..................................................................................................................	25	1	6.00	0.00	0.00	4.00	2.00
........................................................................................................GTCAGCAACTTGCTTCCAGCAA..........................................................	22	1	6.00	0.00	0.00	6.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCT.................................................................................................................	26	1	6.00	0.00	0.00	1.00	5.00
........................................................................................................GTAAGCAACTTGATTCCAGCAA..........................................................	22	1	5.00	0.00	1.00	4.00	0.00
.............................................CCTGGAATTAAGGTGACTGTGTAGCC.................................................................................................................	26	1	5.00	0.00	1.00	3.00	1.00
.............................................CCTGGAATTAAGTTGACTGCGTAGCC.................................................................................................................	26	1	5.00	0.00	0.00	5.00	0.00
........................................................................................................GCCAGCAACTTGATTCCAGCA...........................................................	21	1	5.00	0.00	0.00	5.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAG.............................................................	19	1	5.00	0.00	0.00	4.00	1.00
........................................................................................................GTCAGCAACTTGATTCCAGCTT..........................................................	22	1	5.00	0.00	1.00	4.00	0.00
..............................................CTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	5.00	2.00	1.00	2.00	0.00
.............................................CCCGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	5.00	1.00	0.00	4.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCTA..........................................................	22	1	5.00	0.00	2.00	3.00	0.00
.............................................CCTGGAATTAAGATGACTGTGTAGCC.................................................................................................................	26	1	5.00	1.00	0.00	2.00	2.00
........................................................................................................GTAAGCAACTTGATTCCAGCA...........................................................	21	1	4.00	0.00	1.00	3.00	0.00
........................................................................................................GTCAGCAACTTGATTCCCGCAA..........................................................	22	1	4.00	0.00	0.00	4.00	0.00
........................................................................................................GTCAGCAACTTGATTCTAGCAA..........................................................	22	1	4.00	0.00	1.00	3.00	0.00
.............................................TCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	4.00	0.00	0.00	4.00	0.00
.........................................................................................................TCAGCAACTTGATTCCAGCAA..........................................................	21	1	4.00	2.00	1.00	1.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCA.................................................................................................................	26	1	4.00	0.00	2.00	2.00	0.00
........................................................................................................GACAGCAACTTGATTCCAGCA...........................................................	21	1	4.00	0.00	0.00	4.00	0.00
.............................................CCTGGAATTAAGTTGATTGTGTAGCC.................................................................................................................	26	1	3.00	3.00	0.00	0.00	0.00
........................................................................................................GTCAGCAACTTGATTCCACCAA..........................................................	22	1	3.00	0.00	0.00	3.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTCGC..................................................................................................................	25	1	3.00	0.00	0.00	0.00	3.00
........................................................................................................GTCAGCAACCTGATTCCAGCAA..........................................................	22	1	3.00	0.00	0.00	3.00	0.00
.............................................CCTGGAATTAAGATGACTGTGTATCC.................................................................................................................	26	1	3.00	0.00	2.00	1.00	0.00
.............................................CCTGGAATTAAGTTGCCTGTGTAGC..................................................................................................................	25	1	3.00	2.00	0.00	1.00	0.00
.............................................ACTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	3.00	0.00	0.00	3.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTATC..................................................................................................................	25	1	3.00	0.00	0.00	3.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTACCC.................................................................................................................	26	1	3.00	0.00	0.00	3.00	0.00
.............................................TCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	3.00	0.00	0.00	3.00	0.00
.............................................CCTGGAATTACGTTGACTGTGTAGCC.................................................................................................................	26	1	3.00	0.00	0.00	3.00	0.00
........................................................................................................GTCAGCAACTTGATTCAAGCA...........................................................	21	1	3.00	0.00	0.00	3.00	0.00
........................................................................................................GTCAGCAGCTTGATTCCAGCA...........................................................	21	1	3.00	0.00	0.00	3.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGCAGC..................................................................................................................	25	1	3.00	0.00	0.00	2.00	1.00
.............................................CCTGGAATTAAGTTGACCGTGTAGCC.................................................................................................................	26	1	3.00	3.00	0.00	0.00	0.00
.............................................CCTGGAATTAAGGTGACTGTGTAGC..................................................................................................................	25	1	3.00	1.00	1.00	1.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGTC.................................................................................................................	26	1	3.00	0.00	0.00	3.00	0.00
........................................................................................................GTCAGCAACTTGATTACAGCA...........................................................	21	1	3.00	0.00	0.00	3.00	0.00
........................................................................................................GTGAGCAACTTGATTCCAGCAA..........................................................	22	1	3.00	0.00	0.00	3.00	0.00
........................................................................................................GTCAGCAAATTGATTCCAGCAA..........................................................	22	1	3.00	0.00	1.00	2.00	0.00
........................................................................................................GTCAGCAACTTGATTCCATCAA..........................................................	22	1	3.00	0.00	0.00	3.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGT............................................................	20	1	3.00	2.00	0.00	1.00	0.00
........................................................................................................GTCAGCACCTTGATTCCAGCA...........................................................	21	1	3.00	0.00	1.00	2.00	0.00
.............................................CCTGGGATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	3.00	2.00	1.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTGCGTAGC..................................................................................................................	25	1	3.00	0.00	0.00	3.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCG...........................................................	21	1	3.00	0.00	1.00	2.00	0.00
........................................................................................................GCCAGCAACTTGATTCCAGCAA..........................................................	22	1	3.00	0.00	1.00	2.00	0.00
........................................................................................................GTCAGCGACTTGATTCCAGCA...........................................................	21	1	3.00	0.00	2.00	1.00	0.00
........................................................................................................GTCAGAAACTTGATTCCAGCAA..........................................................	22	1	3.00	0.00	0.00	3.00	0.00
........................................................................................................GTCAGCAACTTGATTCCGGCAA..........................................................	22	1	3.00	0.00	3.00	0.00	0.00
........................................................................................................GTCAGCAACTTGACTCCAGCA...........................................................	21	1	3.00	1.00	0.00	2.00	0.00
.............................................CCTGGAATTAAGTCGACTGTGTAGCC.................................................................................................................	26	1	3.00	1.00	0.00	2.00	0.00
..............................................CTGGAATTAAGTTGACTGTGTAG...................................................................................................................	23	1	3.00	1.00	0.00	2.00	0.00

droPer1

---------------------ATCAGAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGGGAAGG-CAAGGCTTGAGCACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAG------------------------------------CACAACGCTG	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
.............................................CCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	15615.00	634.00	35.00	1647.00	2831.00	10468.00
.............................................CCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	3791.00	672.00	21.00	507.00	760.00	1831.00
........................................................................................................GTCAGCAACTTGATTCCAGCAA..........................................................	22	1	2553.00	55.00	105.00	1093.00	1144.00	156.00
........................................................................................................GTCAGCAACTTGATTCCAGCA...........................................................	21	1	1835.00	42.00	23.00	731.00	1033.00	6.00
.............................................CCTGGAATTAAGTTGACTGTGTAG...................................................................................................................	24	1	873.00	153.00	5.00	246.00	363.00	106.00
..........................AGGCAATTGCGTTGCAGTT...........................................................................................................................................	19	1	304.00	6.00	3.00	111.00	184.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGT.....................................................................................................................	22	1	304.00	33.00	0.00	88.00	181.00	2.00
........................................................................................................GTCAGCAACTTGATTCCAGCAC..........................................................	22	1	199.00	5.00	4.00	31.00	30.00	129.00
.............................................CCTGGAATTAAGTTGACTGTGTCGCC.................................................................................................................	26	1	162.00	0.00	0.00	1.00	5.00	156.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCT................................................................................................................	27	1	160.00	22.00	0.00	29.00	46.00	63.00
.............................................CCTGGAATTAAGTTGACTGTG......................................................................................................................	21	1	143.00	13.00	0.00	49.00	80.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTAGAC.................................................................................................................	26	1	129.00	1.00	0.00	5.00	4.00	119.00
.............................................CCTGGAATTAAGTTGACTGTGTA....................................................................................................................	23	1	93.00	11.00	0.00	30.00	47.00	5.00
.............................................CCTGGAATTAAGTTGACTGTGTATCC.................................................................................................................	26	1	77.00	0.00	0.00	13.00	63.00	1.00
........................................................................................................GTCAGCAACTTGATTCCAGC............................................................	20	1	69.00	1.00	0.00	24.00	36.00	8.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAA.........................................................	23	1	51.00	1.00	0.00	26.00	21.00	3.00
.............................................CCTGGAATTAAGGTGACTGTGTAGCC.................................................................................................................	26	1	49.00	0.00	0.00	1.00	16.00	32.00
.............................................CCTGGAATTAAGTTGACTGTTTAGCC.................................................................................................................	26	1	47.00	0.00	0.00	3.00	8.00	36.00
.............................................CCTGGAATTAAGCTGACTGTGTAGCC.................................................................................................................	26	1	44.00	0.00	0.00	4.00	22.00	18.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCT.................................................................................................................	26	1	39.00	0.00	0.00	3.00	16.00	20.00
.............................................CCTGGAATTAAGTTGACTGT.......................................................................................................................	20	1	39.00	4.00	0.00	11.00	22.00	2.00
........................................................................................................GTCAGCAACTTGATTCCAGCAT..........................................................	22	1	38.00	0.00	0.00	12.00	26.00	0.00
..............................................CTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	37.00	3.00	0.00	7.00	16.00	11.00
.............................................CCTGGAATTAAGTTGACTTTGTAGCC.................................................................................................................	26	1	37.00	0.00	0.00	3.00	0.00	34.00
.............................................CCTGAAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	37.00	0.00	0.00	0.00	3.00	34.00
.............................................CCTGGGATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	35.00	1.00	0.00	4.00	27.00	3.00
.............................................CCTGGAATTAAGTTGACTGTGTCGC..................................................................................................................	25	1	33.00	0.00	0.00	2.00	0.00	31.00
.............................................CCTGGAATTAAGTTGACTGTGCAGCC.................................................................................................................	26	1	31.00	1.00	0.00	4.00	23.00	3.00
.............................................ACTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	31.00	0.00	0.00	5.00	22.00	4.00
.............................................TCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	29.00	0.00	0.00	6.00	20.00	3.00
.............................................CCTGGAATTAAGTTGACTGTGTATC..................................................................................................................	25	1	27.00	0.00	0.00	4.00	23.00	0.00
........................................................................................................GGCAGCAACTTGATTCCAGCAA..........................................................	22	1	25.00	0.00	0.00	7.00	18.00	0.00
.............................................CCTGGAATTAAGTTGACTGGGTAGCC.................................................................................................................	26	1	23.00	0.00	0.00	0.00	4.00	19.00
.............................................CCTGGAATTAAGTTGACxxTGTAGCC.................................................................................................................	24	1	22.00	1.00	0.00	1.00	0.00	20.00
.............................................CCTGGAATTAAGTTGACTG........................................................................................................................	19	1	22.00	1.00	0.00	2.00	6.00	13.00
.............................................CCTGGAATTAAGTTGACTGCGTAGCC.................................................................................................................	26	1	21.00	0.00	0.00	1.00	9.00	11.00
........................................................................................................GTCAGCAACTTGATTCCAGCCA..........................................................	22	1	21.00	0.00	2.00	11.00	4.00	4.00
...........................GGCAATTGCGTTGCAGTT...........................................................................................................................................	18	1	21.00	0.00	0.00	4.00	17.00	0.00
........................................................................................................GTCAGCAACTTGCTTCCAGCA...........................................................	21	1	20.00	0.00	0.00	1.00	19.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGA..................................................................................................................	25	1	19.00	4.00	0.00	3.00	5.00	7.00
.............................................CCTGGAATTAATTTGACTGTGTAGCC.................................................................................................................	26	1	18.00	0.00	0.00	1.00	1.00	16.00
.............................................CCTGGAATTAAGATGACTGTGTAGCC.................................................................................................................	26	1	18.00	0.00	0.00	1.00	4.00	13.00
.............................................CCTTGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	17.00	0.00	0.00	1.00	0.00	16.00
.............................................CCTGGAATTAAGTTGACTGTGTAGT..................................................................................................................	25	1	17.00	4.00	0.00	3.00	6.00	4.00
........................................................................................................GTCAGCAACTTGCTTCCAGCAA..........................................................	22	1	17.00	0.00	1.00	5.00	11.00	0.00
.............................................CCTCGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	17.00	0.00	0.00	0.00	2.00	15.00
........................................................................................................GGCAGCAACTTGATTCCAGCA...........................................................	21	1	17.00	0.00	0.00	4.00	13.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCT...........................................................	21	1	16.00	0.00	0.00	2.00	14.00	0.00
.............................................CCTGGAATTAAGTTGGCTGTGTAGCC.................................................................................................................	26	1	16.00	0.00	0.00	1.00	5.00	10.00
..................................................AATTAAGTTGACTGTGTAGCC.................................................................................................................	21	1	15.00	0.00	0.00	0.00	1.00	14.00
........................................................................................................GTAAGCAACTTGATTCCAGCAA..........................................................	22	1	15.00	0.00	0.00	6.00	9.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCC...........................................................	21	1	15.00	0.00	1.00	4.00	7.00	3.00
.............................................CCTGGCATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	15.00	0.00	0.00	8.00	7.00	0.00
.............................................CCGGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	15.00	0.00	0.00	0.00	14.00	1.00
...................................................ATTAAGTTGACTGTGTAGCC.................................................................................................................	20	1	15.00	3.00	0.00	1.00	1.00	10.00
.............................................CATGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	15.00	0.00	0.00	2.00	13.00	0.00
........................................................................................................GACAGCAACTTGATTCCAGCA...........................................................	21	1	15.00	0.00	0.00	0.00	15.00	0.00
.............................................ACTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	14.00	3.00	0.00	1.00	9.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTACCC.................................................................................................................	26	1	14.00	0.00	0.00	4.00	7.00	3.00
.............................................CCTGGAATTAAGTTGACTGTGTGGCC.................................................................................................................	26	1	14.00	0.00	0.00	2.00	6.00	6.00
.............................................CCTGGAATTAAGTTGACTGTCTAGCC.................................................................................................................	26	1	14.00	0.00	0.00	1.00	2.00	11.00
.............................................CCTGGAATTAGGTTGACTGTGTAGCC.................................................................................................................	26	1	14.00	1.00	0.00	4.00	6.00	3.00
...........................................................................................................AGCAACTTGATTCCAGCA...........................................................	18	1	13.00	0.00	0.00	4.00	9.00	0.00
.............................................CCTGGAATTACGTTGACTGTGTAGCC.................................................................................................................	26	1	12.00	0.00	0.00	2.00	9.00	1.00
........................................................................................................GACAGCAACTTGATTCCAGCAA..........................................................	22	1	12.00	0.00	0.00	4.00	8.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCA.................................................................................................................	26	1	12.00	0.00	1.00	6.00	4.00	1.00
.............................................CCTGGGATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	12.00	0.00	0.00	2.00	10.00	0.00
.............................................CCTGGAATTAAGTCGACTGTGTAGCC.................................................................................................................	26	1	12.00	1.00	0.00	1.00	6.00	4.00
........................................................................................................GTCAGCAACTTGATTCAAGCAA..........................................................	22	1	12.00	0.00	0.00	7.00	5.00	0.00
.............................................TCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	11.00	0.00	0.00	3.00	7.00	1.00
........................................................................................................GTCAGCAACTTGATTCCACCA...........................................................	21	1	11.00	0.00	0.00	2.00	9.00	0.00
..............................................CCTGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	11.00	0.00	0.00	0.00	1.00	10.00
.............................................CCTGCAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	11.00	0.00	0.00	0.00	1.00	10.00
.............................................CCTGGAATTAAGTTGACTGTGTAACC.................................................................................................................	26	1	11.00	0.00	1.00	4.00	1.00	5.00
........................................................................................................GTCAGCAACTTGATTCCAGCACC.........................................................	23	1	11.00	0.00	0.00	0.00	0.00	11.00
........................................................................................................GTCAGCAACTTGTTTCCAGCA...........................................................	21	1	11.00	0.00	0.00	0.00	11.00	0.00
.............................................CCTGGAATTAACTTGACTGTGTAGCC.................................................................................................................	26	1	11.00	0.00	0.00	0.00	5.00	6.00
........................................................................................................GCCAGCAACTTGATTCCAGCAA..........................................................	22	1	11.00	0.00	1.00	3.00	7.00	0.00
.............................................CCTGGAGTTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	10.00	1.00	0.00	3.00	4.00	2.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCC................................................................................................................	27	1	10.00	2.00	0.00	0.00	0.00	8.00
.............................................CCTGGAATTAAGTTGACTGTGTAGTC.................................................................................................................	26	1	10.00	0.00	0.00	1.00	8.00	1.00
.............................................CCTGGAATTAAGTTGACTGTATAGCC.................................................................................................................	26	1	10.00	0.00	0.00	1.00	2.00	7.00
.............................................CCTGGAACTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	10.00	0.00	0.00	1.00	4.00	5.00
........................................................................................................GCCAGCAACTTGATTCCAGCA...........................................................	21	1	10.00	0.00	0.00	3.00	7.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAG.............................................................	19	1	10.00	0.00	0.00	2.00	8.00	0.00
........................................................................................................GTCAGCAAATTGATTCCAGCA...........................................................	21	1	9.00	0.00	1.00	3.00	5.00	0.00
........................................................................................................GTCAGCAGCTTGATTCCAGCAA..........................................................	22	1	9.00	0.00	0.00	4.00	5.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGCAGC..................................................................................................................	25	1	9.00	2.00	0.00	1.00	5.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTAA...................................................................................................................	24	1	9.00	1.00	0.00	2.00	5.00	1.00
........................................................................................................GTCAGAAACTTGATTCCAGCAA..........................................................	22	1	9.00	0.00	0.00	6.00	3.00	0.00
........................................................................................................GTCAGCAACTTGATTCCCGCA...........................................................	21	1	9.00	0.00	0.00	4.00	5.00	0.00
.............................................CCTGGAATTAAGTTCACTGTGTAGCC.................................................................................................................	26	1	9.00	1.00	0.00	0.00	7.00	1.00
.............................................CCCGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	9.00	0.00	0.00	1.00	4.00	4.00
........................................................................................................GTCAGCAACTTGATTCCAGCCT..........................................................	22	1	8.00	0.00	1.00	0.00	1.00	6.00
........................................................................................................GTCAGCAAATTGATTCCAGCAA..........................................................	22	1	8.00	0.00	2.00	2.00	4.00	0.00
.............................................CTTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	8.00	0.00	0.00	3.00	2.00	3.00
.........................................................................................................TCAGCAACTTGATTCCAGCA...........................................................	20	1	8.00	0.00	0.00	3.00	5.00	0.00
........................................................................................................GTCAGCAACTTGATTCCACCAA..........................................................	22	1	8.00	0.00	0.00	2.00	6.00	0.00
........................................................................................................GTCAGCAATTTGATTCCAGCAA..........................................................	22	1	8.00	0.00	0.00	1.00	7.00	0.00
.............................................CCTAGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	8.00	3.00	0.00	1.00	0.00	4.00
.............................................CCTGGAATTAAGGTGACTGTGTAGC..................................................................................................................	25	1	8.00	0.00	0.00	0.00	1.00	7.00

droWil1

AGTAA------G----TATGTGTGTGTGACAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTTAGGGGAAAGGCTTGAGCATTGCATACTAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAG------------------------------------CTCAACGTTC	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
.............................................CCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	112910.00	154.00	969.00	1614.00	110173.00
.............................................CCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	45798.00	295.00	823.00	2124.00	42556.00
........................................................................................................GTCAGCAACTTGATTCCAGCA...........................................................	21	1	9725.00	38.00	584.00	6733.00	2370.00
........................................................................................................GTCAGCAACTTGATTCCAGCAC..........................................................	22	1	7927.00	8.00	47.00	190.00	7682.00
........................................................................................................GTCAGCAACTTGATTCCAGCAA..........................................................	22	1	7731.00	70.00	938.00	2532.00	4191.00
.............................................CCTGGAATTAAGTTGACTGTGTAG...................................................................................................................	24	1	4926.00	73.00	54.00	224.00	4575.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCT................................................................................................................	27	1	2322.00	5.00	19.00	45.00	2253.00
........................................................................................................GTCAGCAACTTGATTCCAGC............................................................	20	1	1770.00	1.00	2.00	85.00	1682.00
.............................................CCTGGAATTAAGTTGACTGTGTAGAC.................................................................................................................	26	1	1611.00	0.00	1.00	6.00	1604.00
.............................................CCTGGAATTAAGTTGACTGTGTCGCC.................................................................................................................	26	1	1550.00	0.00	2.00	2.00	1546.00
.............................................CCTGGAATTAAGTTGACTGTGT.....................................................................................................................	22	1	1164.00	37.00	5.00	83.00	1039.00
........................................................................................................GTCAGCAACTTGATTCCAGCACC.........................................................	23	1	1152.00	0.00	2.00	10.00	1140.00
.............................................CCTGGAATTAAGTTGACTGTGTCGC..................................................................................................................	25	1	616.00	0.00	0.00	2.00	614.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCT.................................................................................................................	26	1	505.00	2.00	4.00	8.00	491.00
.............................................CCTGGAATTAAGTTGACTG........................................................................................................................	19	1	440.00	0.00	0.00	0.00	440.00
.............................................CCTGGAATTAAGTTGACTGTTTAGCC.................................................................................................................	26	1	432.00	1.00	1.00	3.00	427.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCC................................................................................................................	27	1	367.00	0.00	0.00	4.00	363.00
.............................................CCTGGAATTAAGTTGACTGTGTA....................................................................................................................	23	1	355.00	6.00	17.00	30.00	302.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAT.........................................................	23	1	307.00	0.00	0.00	70.00	237.00
.............................................CCTGGAATTAAGGTGACTGTGTAGCC.................................................................................................................	26	1	303.00	0.00	1.00	0.00	302.00
.............................................CCTGGAATTAAGATGACTGTGTAGCC.................................................................................................................	26	1	272.00	0.00	1.00	2.00	269.00
.............................................CCTGGAATTAAGTTGACTGTGTAGA..................................................................................................................	25	1	270.00	1.00	2.00	11.00	256.00
.............................................CCTGGAATTAAGTTGACTGTG......................................................................................................................	21	1	245.00	5.00	2.00	92.00	146.00
.............................................CCTGGAATTAAGTTGACTTTGTAGCC.................................................................................................................	26	1	231.00	0.00	2.00	1.00	228.00
.............................................CCTGGAATTAAGTTGACTGTGTGG...................................................................................................................	24	1	191.00	0.00	0.00	0.00	191.00
.............................................CCTGGAATTAAGTTGACxxTGTAGCC.................................................................................................................	24	1	186.00	0.00	0.00	5.00	181.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAA.........................................................	23	1	170.00	0.00	25.00	61.00	84.00
.............................................CCTGAAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	170.00	0.00	1.00	3.00	166.00
.............................................CCTGGAATTAAGTTGACTGTGG.....................................................................................................................	22	1	165.00	0.00	0.00	0.00	165.00
.............................................CCTGGAATTAATTTGACTGTGTAGCC.................................................................................................................	26	1	164.00	0.00	1.00	0.00	163.00
..............................................CTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	150.00	2.00	4.00	13.00	131.00
.............................................CCTTGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	149.00	0.00	1.00	2.00	146.00
.............................................CCTGGAATTAAGCTGACTGTGTAGCC.................................................................................................................	26	1	138.00	0.00	2.00	4.00	132.00
.............................................CCTGGAATTAAGTTGACTGTxTAGCC.................................................................................................................	25	1	138.00	0.00	0.00	1.00	137.00
........................................................................................................GTCAGCAACTTGATTCCAGCAT..........................................................	22	1	132.00	1.00	3.00	28.00	100.00
.............................................CCTGGAATTAAGTTGACTGTGTAA...................................................................................................................	24	1	122.00	0.00	0.00	8.00	114.00
.............................................CCTGGAATTAAGTTGACTGGGTAGCC.................................................................................................................	26	1	118.00	0.00	1.00	0.00	117.00
.............................................CCTGGAATTAAGTTGACTGTGC.....................................................................................................................	22	1	118.00	0.00	0.00	0.00	118.00
.............................................CCTGGAATTAAGTTGACTGCGTAGCC.................................................................................................................	26	1	117.00	0.00	2.00	1.00	114.00
.............................................CCTGGAATTAAGGTGACTGTGTAGC..................................................................................................................	25	1	112.00	0.00	0.00	1.00	111.00
...................................................ATTAAGTTGACTGTGTAGCC.................................................................................................................	20	1	110.00	1.00	3.00	0.00	106.00
.............................................CCTGGAATTAAGATGACTGTGTAGC..................................................................................................................	25	1	103.00	0.00	0.00	4.00	99.00
..........................TGACAATTGCGTTGCAGTT...........................................................................................................................................	19	1	97.00	5.00	32.00	51.00	9.00
.............................................CCTGGAATTAAGTTGACTGTTTAGC..................................................................................................................	25	1	96.00	0.00	1.00	0.00	95.00
........................................................................................................GTCAGCAACTTGATTCCAGCACT.........................................................	23	1	90.00	0.00	0.00	6.00	84.00
.............................................CCTCGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	90.00	0.00	2.00	0.00	88.00
.............................................CCTGGAATTAGGTTGACTGTGTAGCC.................................................................................................................	26	1	89.00	0.00	0.00	1.00	88.00
.............................................CCTGGAATTAAGTTGACTGTGTCG...................................................................................................................	24	1	86.00	0.00	0.00	0.00	86.00
.............................................CCTGGAATTAAGTTGACTGTGTAGG..................................................................................................................	25	1	84.00	0.00	0.00	0.00	84.00
.........................................................................................................TCAGCAACTTGATTCCAGCA...........................................................	20	1	83.00	1.00	1.00	79.00	2.00
.............................................CCTGGAATTAAGTTGACTGTAG.....................................................................................................................	22	1	82.00	0.00	1.00	2.00	79.00
.............................................CCTGGAATTAAGTTGACTGTCTAGCC.................................................................................................................	26	1	79.00	0.00	0.00	1.00	78.00
........................................................................................................GTCAGCAACTTGATTCCAGCC...........................................................	21	1	79.00	0.00	0.00	21.00	58.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCA.................................................................................................................	26	1	78.00	2.00	5.00	10.00	61.00
..............................................CCTGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	77.00	0.00	1.00	2.00	74.00
.............................................CCTGGAATTAAGTTGGCTGTGTAGCC.................................................................................................................	26	1	75.00	0.00	0.00	2.00	73.00
.............................................CCTGGAATTAAGTTGACTGTGTAAC..................................................................................................................	25	1	73.00	0.00	0.00	6.00	67.00
.............................................CCTGGGATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	72.00	0.00	1.00	2.00	69.00
.............................................CCCGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	71.00	1.00	1.00	3.00	66.00
..............................................CTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	68.00	5.00	9.00	15.00	39.00
........................................................................................................GTCAGCAACTTGATTCCAGCG...........................................................	21	1	68.00	0.00	3.00	6.00	59.00
.............................................CCTTGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	67.00	0.00	2.00	1.00	64.00
.............................................CCTGGAATTAAGTTGACTGT.......................................................................................................................	20	1	64.00	1.00	1.00	5.00	57.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCG................................................................................................................	27	1	64.00	0.00	1.00	0.00	63.00
........................................................................................................GTCAGCAACTTGATTCCAG.............................................................	19	1	62.00	0.00	6.00	43.00	13.00
.............................................CCTGGAATTAAGTTGACTTTGTAG...................................................................................................................	24	1	61.00	0.00	0.00	2.00	59.00
.............................................CCTGGAATTAAGCTGACTGTGTAGC..................................................................................................................	25	1	60.00	0.00	1.00	5.00	54.00
.............................................CCTGGAATTAAGTTGACTCTGTAGCC.................................................................................................................	26	1	59.00	0.00	0.00	1.00	58.00
.............................................CCTGGAATTAAGTTGACTGTGCAGCC.................................................................................................................	26	1	58.00	0.00	1.00	8.00	49.00
.............................................CCTGGAATTAAGTTGACTGCGTAGC..................................................................................................................	25	1	56.00	0.00	1.00	6.00	49.00
..................................................AATTAAGTTGACTGTGTAGCC.................................................................................................................	21	1	53.00	0.00	0.00	1.00	52.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCA................................................................................................................	27	1	51.00	0.00	0.00	0.00	51.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCCC...............................................................................................................	28	1	51.00	0.00	0.00	2.00	49.00
.............................................CCTGGAATTAAGTTGACTGTGTGGCC.................................................................................................................	26	1	49.00	0.00	0.00	1.00	48.00
.............................................CCTGTAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	48.00	0.00	2.00	0.00	46.00
........................................................................................................GTCAGCAACTTGATTCCAGCAG..........................................................	22	1	47.00	0.00	1.00	10.00	36.00
.............................................CCTGGAATTAAGTTGACTGTATAGCC.................................................................................................................	26	1	46.00	0.00	0.00	4.00	42.00
.............................................CCTGGAATTAAGTTGACCGTGTAGCC.................................................................................................................	26	1	44.00	0.00	1.00	0.00	43.00
.............................................CCTGGAATTAAGTTGACTGGGTAGC..................................................................................................................	25	1	44.00	0.00	0.00	1.00	43.00
.............................................CCTGGAATTAAGTTGACTGTGCAGC..................................................................................................................	25	1	43.00	0.00	4.00	10.00	29.00
.........................................................................................................TCAGCAACTTGATTCCAGCAA..........................................................	21	1	43.00	2.00	7.00	32.00	2.00
.............................................CCTAGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	42.00	0.00	3.00	5.00	34.00
.............................................CCTGAAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	42.00	1.00	1.00	1.00	39.00
.............................................CCTGGAATTAAGTTGACTGTGTAC...................................................................................................................	24	1	41.00	0.00	0.00	0.00	41.00
........................................................................................................GTCAGCAACTTxATTCCAGCAA..........................................................	21	1	41.00	0.00	2.00	3.00	36.00
.............................................CCTGGGATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	40.00	0.00	2.00	4.00	34.00
.............................................CCTGGAATTAAGTTGACTATGTAGCC.................................................................................................................	26	1	40.00	0.00	0.00	4.00	36.00
.............................................CCTGGAATTAATTTGACTGTGTAGC..................................................................................................................	25	1	40.00	0.00	1.00	1.00	38.00
.............................................CCTGGAATTAAGTTGACTGTGTAAA..................................................................................................................	25	1	40.00	0.00	0.00	1.00	39.00
...................................................ATTAAGTTGACTGTGTAGC..................................................................................................................	19	1	40.00	4.00	2.00	3.00	31.00
........................................................................................................GTCAGCAACTTGATTCCAGAA...........................................................	21	1	40.00	0.00	1.00	39.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGAAGCC.................................................................................................................	26	1	38.00	0.00	1.00	7.00	30.00
.............................................CCTGGAATTAAGTTGGCTGTGTAGC..................................................................................................................	25	1	38.00	0.00	0.00	2.00	36.00
.............................................CCTGGAGTTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	37.00	0.00	1.00	1.00	35.00
........................................................................................................GTCAGCAACTTTATTCCAGCAA..........................................................	22	1	37.00	0.00	2.00	4.00	31.00
........................................................................................................GTCAGCAACTTGATTCCAGCACCT........................................................	24	1	37.00	0.00	0.00	2.00	35.00
........................................................................................................GTCAGCAACTTGATTCCAGCT...........................................................	21	1	37.00	2.00	0.00	12.00	23.00
.............................................CCTGGAATTAAGTTGACTGTGTATCC.................................................................................................................	26	1	37.00	0.00	4.00	6.00	27.00
.............................................CCTGGAATTAAGTTAACTGTGTAGCC.................................................................................................................	26	1	37.00	0.00	0.00	7.00	30.00
.............................................CCTGGAATTAAGTCGACTGTGTAGCC.................................................................................................................	26	1	37.00	0.00	0.00	4.00	33.00
........................................................................................................GTCAGCAACTTTATTCCAGCA...........................................................	21	1	36.00	0.00	1.00	8.00	27.00

droVir3

TGTAT-TCAATT----TTTGGATAAATGGAAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTAAAGG-GAAGGCTTGTGCACTGCTTACAAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAG------------------------------------GACAACGTTG	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
.............................................CCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	14140.00	605.00	580.00	43.00	2738.00	10174.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	9039.00	154.00	196.00	23.00	1575.00	7091.00
........................................................................................................GTCAGCAACTTGATTCCAGCA...........................................................	21	1	2435.00	165.00	1637.00	21.00	112.00	500.00
.............................................CCTGGAATTAAGTTGACTGTGTAG...................................................................................................................	24	1	2292.00	250.00	233.00	2.00	589.00	1218.00
........................................................................................................GTCAGCAACTTGATTCCAGCAA..........................................................	22	1	1771.00	299.00	817.00	50.00	169.00	436.00
.............................................CCTGGAATTAAGTTGACTGTGT.....................................................................................................................	22	1	809.00	72.00	190.00	0.00	113.00	434.00
........................................................................................................GTCAGCAACTTGATTCCAGC............................................................	20	1	751.00	6.00	88.00	0.00	66.00	591.00
.............................................CCTGGAATTAAGTTGACTG........................................................................................................................	19	1	338.00	1.00	12.00	0.00	43.00	282.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCT................................................................................................................	27	1	322.00	18.00	9.00	0.00	89.00	206.00
........................................................................................................GTCAGCAACTTGATTCCAGCAC..........................................................	22	1	295.00	1.00	27.00	0.00	34.00	233.00
.............................................CCTGGAATTAAGTTGACTGTG......................................................................................................................	21	1	260.00	20.00	156.00	0.00	15.00	69.00
.............................................CCTGGAATTAAGTTGACTGTGTA....................................................................................................................	23	1	234.00	40.00	38.00	0.00	44.00	112.00
.............................................CCTGGAATTAAGTTGACTGTGTAGAC.................................................................................................................	26	1	172.00	0.00	0.00	0.00	21.00	151.00
........................................................................................................GTCAGCAACTTGATTCCAGCAT..........................................................	22	1	137.00	9.00	76.00	2.00	4.00	46.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCC................................................................................................................	27	1	131.00	5.00	1.00	1.00	59.00	65.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCT.................................................................................................................	26	1	118.00	2.00	1.00	0.00	31.00	84.00
.............................................CCTGGAATTAAGTTGACTGTGTAGA..................................................................................................................	25	1	116.00	7.00	3.00	0.00	38.00	68.00
.............................................CCTGGAATTAAGTTGACTGTGTGG...................................................................................................................	24	1	101.00	0.00	0.00	0.00	36.00	65.00
.............................................CCTGGAATTAAGTTGACTGTGG.....................................................................................................................	22	1	100.00	0.00	0.00	0.00	13.00	87.00
.............................................CCTGGAATTAAGTTGACTGTGC.....................................................................................................................	22	1	96.00	0.00	0.00	0.00	12.00	84.00
..........................TGGAAATTGCGTTGCAGTT...........................................................................................................................................	19	1	95.00	26.00	63.00	6.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTGT.......................................................................................................................	20	1	74.00	2.00	28.00	0.00	3.00	41.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAA.........................................................	23	1	68.00	8.00	29.00	2.00	6.00	23.00
.............................................CCTGGAATTAAGTTGACTGTGTAA...................................................................................................................	24	1	65.00	5.00	4.00	0.00	23.00	33.00
........................................................................................................GGCAGCAACTTGATTCCAGCA...........................................................	21	1	60.00	0.00	60.00	0.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGG..................................................................................................................	25	1	58.00	1.00	0.00	0.00	23.00	34.00
........................................................................................................GTCAGCAACTTGATTCCAG.............................................................	19	1	49.00	1.00	33.00	0.00	1.00	14.00
........................................................................................................GTCAGCAACTTGATTCCAGCT...........................................................	21	1	41.00	2.00	23.00	0.00	0.00	16.00
.............................................CCTGGAATTAAGTTGACTGTGTAAC..................................................................................................................	25	1	32.00	1.00	1.00	0.00	4.00	26.00
........................................................................................................GTCAGCAACTTGATTCCAGCC...........................................................	21	1	26.00	0.00	14.00	0.00	0.00	12.00
.............................................CCTGGAATTAAGTTGACTGGGTAGC..................................................................................................................	25	1	26.00	0.00	0.00	0.00	7.00	19.00
........................................................................................................GGCAGCAACTTGATTCCAGCAA..........................................................	22	1	23.00	1.00	21.00	1.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTGTTTAGCC.................................................................................................................	26	1	22.00	0.00	2.00	0.00	5.00	15.00
........................................................................................................GTCAGCAACTTGATTCCAGCG...........................................................	21	1	22.00	0.00	2.00	0.00	6.00	14.00
..............................................CTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	21.00	3.00	2.00	0.00	5.00	11.00
.............................................CCTGGAATTAAGTTGACTGTGCAGC..................................................................................................................	25	1	20.00	1.00	7.00	0.00	1.00	11.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCG................................................................................................................	27	1	19.00	0.00	0.00	0.00	7.00	12.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCA.................................................................................................................	26	1	19.00	1.00	0.00	0.00	8.00	10.00
.............................................CCTGGAATTAAGTTGACTGTGTAC...................................................................................................................	24	1	18.00	0.00	0.00	0.00	7.00	11.00
.........................ATGGAAATTGCGTTGCAGTT...........................................................................................................................................	20	1	17.00	12.00	5.00	0.00	0.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAG..........................................................	22	1	17.00	1.00	4.00	0.00	3.00	9.00
.............................................CCTGGAATTAAGTTGACT.........................................................................................................................	18	1	17.00	0.00	2.00	0.00	0.00	15.00
.............................................CCTGGAATTAAGTTGACTGGGTAGCC.................................................................................................................	26	1	15.00	0.00	0.00	0.00	2.00	13.00
.............................................CCTGGAATTAAGTTGACTGTTTAGC..................................................................................................................	25	1	14.00	2.00	1.00	0.00	4.00	7.00
........................................................................................................GTCAGCAACTTGCTTCCAGCA...........................................................	21	1	14.00	0.00	14.00	0.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTGCGTAGC..................................................................................................................	25	1	14.00	0.00	1.00	0.00	3.00	10.00
.............................................CCTGGAATTAAGTTGACTGTGTAT...................................................................................................................	24	1	14.00	0.00	4.00	0.00	1.00	9.00
.............................................CCTGGAATTAAGTTGGCTGTGTAGCC.................................................................................................................	26	1	14.00	0.00	0.00	0.00	2.00	12.00
.............................................CCTGGAATTAAGTTGACTGTAG.....................................................................................................................	22	1	14.00	0.00	0.00	0.00	3.00	11.00
.............................................CCTGAAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	13.00	0.00	0.00	0.00	2.00	11.00
.............................................CCTGGAATTAAGTTGACTGTGTAAA..................................................................................................................	25	1	13.00	0.00	1.00	0.00	2.00	10.00
.............................................CCTGGAATTAAGCTGACTGTGTAGCC.................................................................................................................	26	1	13.00	1.00	1.00	0.00	2.00	9.00
.............................................CCTGGAATTAAGTTGACTGCGTAGCC.................................................................................................................	26	1	13.00	1.00	2.00	0.00	3.00	7.00
........................................................................................................GTCAGCAACTTGATTCCAGCCA..........................................................	22	1	13.00	0.00	12.00	1.00	0.00	0.00
...................................................ATTAAGTTGACTGTGTAGCC.................................................................................................................	20	1	13.00	0.00	1.00	0.00	5.00	7.00
.............................................CCTGGAATTAAGTTGACTGTGCAGCC.................................................................................................................	26	1	12.00	0.00	2.00	0.00	2.00	8.00
.............................................CCTGGAATTAAGTTGACTTTGTAGCC.................................................................................................................	26	1	12.00	0.00	0.00	1.00	6.00	5.00
.............................................CCTGGAATTAAGTTGACTGTGTATC..................................................................................................................	25	1	12.00	1.00	9.00	2.00	0.00	0.00
...................................................ATTAAGTTGACTGTGTAGC..................................................................................................................	19	1	11.00	3.00	0.00	0.00	1.00	7.00
.............................................CCTGGAATTAAGTTGGCTGTGTAGC..................................................................................................................	25	1	11.00	0.00	1.00	0.00	0.00	10.00
.............................................CCTGGAATTAAGTTGACTGTGTT....................................................................................................................	23	1	11.00	2.00	1.00	0.00	0.00	8.00
.............................................CCTGGAATTAAGTTGACTGTCTAGC..................................................................................................................	25	1	10.00	1.00	2.00	2.00	1.00	4.00
........................................................................................................GTCAGCAACTTGATTCCAGCACC.........................................................	23	1	10.00	0.00	0.00	0.00	4.00	6.00
.............................................CCCGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	10.00	1.00	0.00	0.00	1.00	8.00
.............................................CCTGGAATTAAGTTGACTGTGTAGT..................................................................................................................	25	1	10.00	0.00	2.00	0.00	3.00	5.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCG.................................................................................................................	26	1	10.00	0.00	0.00	0.00	2.00	8.00
.............................................CCTGGAATTAAGCTGACTGTGTAGC..................................................................................................................	25	1	10.00	1.00	3.00	0.00	1.00	5.00
........................................................................................................GTCAGAAACTTGATTCCAGCA...........................................................	21	1	9.00	0.00	8.00	0.00	0.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTATCC.................................................................................................................	26	1	9.00	0.00	7.00	2.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTTT...................................................................................................................	24	1	9.00	0.00	0.00	0.00	3.00	6.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAT.........................................................	23	1	9.00	0.00	3.00	0.00	1.00	5.00
.............................................CCTGGGATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	9.00	0.00	3.00	0.00	1.00	5.00
.............................................CCTGGAATTAAGTTGACTxTGTAG...................................................................................................................	23	1	9.00	1.00	0.00	0.00	4.00	4.00
.............................................CCTGGAATTAAGTTGACTGG.......................................................................................................................	20	1	9.00	0.00	0.00	0.00	1.00	8.00
.............................................CCTGGGATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	9.00	0.00	2.00	0.00	3.00	4.00
..............................................CTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	9.00	1.00	2.00	0.00	0.00	6.00
.............................................CCTGGAATTAAGTTGATTGTGTAGC..................................................................................................................	25	1	9.00	1.00	1.00	0.00	4.00	3.00
.............................................TCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	9.00	0.00	6.00	1.00	1.00	1.00
........................................................................................................GTCAGCAACTTGATTCAAGCA...........................................................	21	1	9.00	0.00	8.00	0.00	1.00	0.00
........................................................................................................GTCAGCAACTTGATTCCT..............................................................	18	1	8.00	0.00	0.00	0.00	2.00	6.00
........................................................................................................GTCAGCAACTTGTTTCCAGCA...........................................................	21	1	8.00	0.00	8.00	0.00	0.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCACT.........................................................	23	1	8.00	0.00	1.00	0.00	1.00	6.00
.............................................CCTGGAATTAAGTTGACTGTxTAGCC.................................................................................................................	25	1	8.00	0.00	0.00	0.00	1.00	7.00
........................................................................................................GTCAGCAACTTGATTCCACCA...........................................................	21	1	8.00	0.00	8.00	0.00	0.00	0.00
.............................................CCTTGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	7.00	0.00	0.00	0.00	2.00	5.00
.............................................CCTGGAATTAAGTTGACTGTTTAG...................................................................................................................	24	1	7.00	0.00	1.00	0.00	1.00	5.00
........................................................................................................GTCAGCAACTTGATTCCGGCA...........................................................	21	1	7.00	0.00	7.00	0.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTTTGTAG...................................................................................................................	24	1	7.00	0.00	0.00	0.00	7.00	0.00
.............................................CCTGGAATTAATTTGACTGTGTAGCC.................................................................................................................	26	1	7.00	0.00	0.00	0.00	3.00	4.00
.............................................CCTGAAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	7.00	0.00	0.00	0.00	1.00	6.00
.............................................CCTGGAATTAAGTTGACTGCGTAG...................................................................................................................	24	1	7.00	1.00	1.00	0.00	2.00	3.00
........................................................................................................GTCAGCAACTTGGTTCCAGCA...........................................................	21	1	7.00	1.00	6.00	0.00	0.00	0.00
........................................................................................................GACAGCAACTTGATTCCAGCA...........................................................	21	1	7.00	1.00	6.00	0.00	0.00	0.00
.............................................CCTGGAATTAAGGTGACTGTGTAGC..................................................................................................................	25	1	7.00	0.00	7.00	0.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGAAGC..................................................................................................................	25	1	7.00	3.00	1.00	0.00	2.00	1.00
.............................................CCCGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	7.00	0.00	0.00	0.00	1.00	6.00
........................................................................................................GTCAGCAACTTGATTCCAGT............................................................	20	1	7.00	0.00	2.00	0.00	0.00	5.00
..............................................CCTGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	7.00	0.00	0.00	0.00	0.00	7.00
...........................................................................................................AGCAACTTGATTCCAGCAA..........................................................	19	1	7.00	1.00	6.00	0.00	0.00	0.00
.........................................................................................................TCAGCAACTTGATTCCAGCA...........................................................	20	1	6.00	2.00	4.00	0.00	0.00	0.00

droMoj3

---------------------TGTAT---TAATTGCGTTGCAGTTCCTGGAATAAAGTTGACTGTGTCGCCTGTAAGGG-GAAGGCTTTTGCATTGCTTACAAAGTCAGCAACTTGATTCCAGCAACTGCGGCCCAAG------------------------------------CTCAACGTGG	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
........................................................................................................GTCAGCAACTTGATTCCAGCA...........................................................	21	1	3221.00	409.00	1522.00	1276.00	14.00
.............................................CCTGGAATAAAGTTGACTGTGTCG...................................................................................................................	24	1	2694.00	1825.00	567.00	302.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTCGC..................................................................................................................	25	1	2320.00	1057.00	859.00	393.00	11.00
........................................................................................................GTCAGCAACTTGATTCCAGCAA..........................................................	22	1	1935.00	537.00	776.00	602.00	20.00
.............................................CCTGGAATAAAGTTGACTGTGTCGCC.................................................................................................................	26	1	1052.00	433.00	430.00	184.00	5.00
.............................................CCTGGAATAAAGTTGACTGTGT.....................................................................................................................	22	1	446.00	287.00	107.00	52.00	0.00
.............................................CCTGGAATAAAGTTGACTGTG......................................................................................................................	21	1	305.00	128.00	119.00	58.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTC....................................................................................................................	23	1	251.00	139.00	71.00	40.00	1.00
........................................................................................................GTCAGCAACTTGATTCCAGCAT..........................................................	22	1	206.00	36.00	89.00	81.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAT.........................................................	23	1	139.00	5.00	79.00	54.00	1.00
........................................................................................................GTCAGCAACTTGATTCCAGC............................................................	20	1	97.00	9.00	43.00	45.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCATT.........................................................	23	1	72.00	0.00	42.00	30.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTCGCCT................................................................................................................	27	1	64.00	30.00	27.00	7.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCT...........................................................	21	1	43.00	6.00	17.00	20.00	0.00
.............................................CCTGGAATAAAGTTGACTGT.......................................................................................................................	20	1	42.00	17.00	17.00	8.00	0.00
........................................................................................................GGCAGCAACTTGATTCCAGCA...........................................................	21	1	37.00	0.00	27.00	10.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAA.........................................................	23	1	36.00	5.00	19.00	10.00	2.00
........................................................................................................GTCAGCAACTTGATTCCAGCCA..........................................................	22	1	35.00	0.00	2.00	33.00	0.00
.......................TAT---TAATTGCGTTGCAGTT...........................................................................................................................................	19	1	35.00	5.00	16.00	13.00	1.00
........................................................................................................GTCAGCAACTTGATTCCAGCAC..........................................................	22	1	32.00	3.00	16.00	11.00	2.00
........................................................................................................GTCAGCAACTTGATTCCAGCC...........................................................	21	1	31.00	0.00	9.00	22.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTCGCT.................................................................................................................	26	1	29.00	14.00	10.00	5.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAG.............................................................	19	1	29.00	1.00	15.00	13.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTCGT..................................................................................................................	25	1	28.00	10.00	13.00	5.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTCT...................................................................................................................	24	1	25.00	6.00	12.00	7.00	0.00
........................................................................................................GTCAGCAACTTGATTCCATCA...........................................................	21	1	23.00	0.00	8.00	15.00	0.00
........................................................................................................GTCAGCAACTTGATTCCCGCA...........................................................	21	1	21.00	0.00	0.00	20.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	20.00	5.00	6.00	9.00	0.00
.............................................CCTGGAATAAAGTTGACTG........................................................................................................................	19	1	20.00	14.00	3.00	3.00	0.00
........................................................................................................GTCAGCAACTTGCTTCCAGCA...........................................................	21	1	20.00	0.00	11.00	9.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCATTT........................................................	24	1	19.00	0.00	12.00	7.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTCTC..................................................................................................................	25	1	19.00	2.00	6.00	11.00	0.00
........................AT---TAATTGCGTTGCAGTT...........................................................................................................................................	18	1	19.00	1.00	9.00	6.00	3.00
...........................................................................................................AGCAACTTGATTCCAGCA...........................................................	18	1	18.00	0.00	9.00	9.00	0.00
..............................................CTGGAATAAAGTTGACTGTGTCG...................................................................................................................	23	1	17.00	11.00	3.00	3.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTCGA..................................................................................................................	25	1	15.00	11.00	4.00	0.00	0.00
.............................................CCTGGAATAAAGTTGACTGTT......................................................................................................................	21	1	14.00	11.00	3.00	0.00	0.00
.............................................CCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	14.00	8.00	3.00	3.00	0.00
........................................................................................................GGCAGCAACTTGATTCCAGCAA..........................................................	22	1	14.00	1.00	9.00	4.00	0.00
........................................................................................................GACAGCAACTTGATTCCAGCA...........................................................	21	1	13.00	0.00	13.00	0.00	0.00
........................................................................................................GTCAGCAACTTGTTTCCAGCA...........................................................	21	1	13.00	0.00	9.00	4.00	0.00
........................................................................................................GTCAGCAACTTGCTTCCAGCAA..........................................................	22	1	11.00	0.00	3.00	8.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCTT..........................................................	22	1	11.00	2.00	1.00	8.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAATT........................................................	24	1	11.00	2.00	5.00	4.00	0.00
........................................................................................................GCCAGCAACTTGATTCCAGCA...........................................................	21	1	11.00	1.00	9.00	1.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTCGCCTT...............................................................................................................	28	1	10.00	3.00	5.00	2.00	0.00
........................................................................................................GTCAGCAACTTGGTTCCAGCA...........................................................	21	1	9.00	0.00	3.00	6.00	0.00
........................................................................................................GTCAGCAACTTGATTCTAGCA...........................................................	21	1	9.00	2.00	3.00	4.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTCTCC.................................................................................................................	26	1	9.00	1.00	3.00	5.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCTA..........................................................	22	1	9.00	0.00	4.00	5.00	0.00
........................................................................................................GTCCGCAACTTGATTCCAGCA...........................................................	21	1	8.00	0.00	5.00	3.00	0.00
........................................................................................................GTAAGCAACTTGATTCCAGCA...........................................................	21	1	8.00	0.00	4.00	4.00	0.00
........................................................................................................GTCAGCAACTTGATTCCGGCA...........................................................	21	1	8.00	0.00	5.00	3.00	0.00
........................................................................................................GCCAGCAACTTGATTCCAGCAA..........................................................	22	1	8.00	2.00	5.00	1.00	0.00
...........................................................................................................AGCAACTTGATTCCAGCAA..........................................................	19	1	8.00	0.00	5.00	3.00	0.00
........................................................................................................GTCAGCAACCTGATTCCAGCA...........................................................	21	1	8.00	0.00	3.00	5.00	0.00
........................................................................................................GTCAGCAACTTGATTTCAGCA...........................................................	21	1	7.00	0.00	4.00	3.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTCA...................................................................................................................	24	1	7.00	5.00	1.00	1.00	0.00
........................................................................................................GTCAGCAGCTTGATTCCAGCA...........................................................	21	1	7.00	0.00	7.00	0.00	0.00
........................................................................................................GTCAGCAACTTGATTCAAGCA...........................................................	21	1	7.00	0.00	6.00	1.00	0.00
........................................................................................................GTCAGCAACTTGATTCCCGCAA..........................................................	22	1	7.00	0.00	0.00	7.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCACT.........................................................	23	1	7.00	2.00	1.00	4.00	0.00
..............................................CTGGAATAAAGTTGACTGTGTCGC..................................................................................................................	24	1	7.00	4.00	2.00	1.00	0.00
.............................................CCTGGAGTAAAGTTGACTGTGTCG...................................................................................................................	24	1	7.00	3.00	2.00	2.00	0.00
........................................................................................................GTCAGAAACTTGATTCCAGCA...........................................................	21	1	6.00	1.00	2.00	3.00	0.00
.............................................ACTGGAATAAAGTTGACTGTGTCG...................................................................................................................	24	1	6.00	3.00	3.00	0.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTCCC..................................................................................................................	25	1	6.00	1.00	3.00	2.00	0.00
........................................................................................................GTCAGCAACTTGATCCCAGCA...........................................................	21	1	6.00	0.00	4.00	2.00	0.00
.............................................CCTGGAATAAAGCTGACTGTGTCGC..................................................................................................................	25	1	6.00	0.00	5.00	1.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGCCGC..................................................................................................................	25	1	6.00	2.00	3.00	1.00	0.00
.............................................CCTGGCATAAAGTTGACTGTGTCGC..................................................................................................................	25	1	6.00	0.00	2.00	4.00	0.00
........................................................................................................GTCAGCAACTTGATTCCACCA...........................................................	21	1	6.00	0.00	3.00	3.00	0.00
.............................................CCTGGAATAAAGATGACTGTGTCGC..................................................................................................................	25	1	6.00	2.00	3.00	1.00	0.00
.............................................CCTGGAATAAAGTTGACTGTCG.....................................................................................................................	22	1	6.00	6.00	0.00	0.00	0.00
........................................................................................................GTCAGCAACTTGATTCCATCAA..........................................................	22	1	6.00	0.00	1.00	5.00	0.00
.............................................CCTGGAATAAAGTTGACTGTGTAGC..................................................................................................................	25	1	6.00	1.00	3.00	2.00	0.00
.......................................................................................................AGTCAGCAACTTGATTCCAGCAA..........................................................	23	1	5.00	0.00	2.00	3.00	0.00
........................................................................................................ATCAGCAACTTGATTCCAGCA...........................................................	21	1	5.00	0.00	3.00	2.00	0.00
........................................................................................................GTCAGCAACTTGATTCCGGCAA..........................................................	22	1	5.00	1.00	2.00	2.00	0.00
.............................................CCTGGAATAAAGTTGGCTGTGTCG...................................................................................................................	24	1	5.00	3.00	1.00	1.00	0.00
........................................................................................................GTCGGCAACTTGATTCCAGCAA..........................................................	22	1	5.00	1.00	2.00	2.00	0.00
.............................................TCTGGAATAAAGTTGACTGTGTCG...................................................................................................................	24	1	5.00	2.00	3.00	0.00	0.00
........................................................................................................GTCAGCAACTTGACTCCAGCAA..........................................................	22	1	5.00	0.00	4.00	1.00	0.00
.............................................CCTGGAATAAAGTTGCCTGTGTCG...................................................................................................................	24	1	5.00	1.00	3.00	1.00	0.00
.............................................CCTGGCATAAAGTTGACTGTGTCG...................................................................................................................	24	1	5.00	0.00	3.00	2.00	0.00
.............................................CCTGGAATAAAGTTGACTGTTTCGC..................................................................................................................	25	1	5.00	2.00	2.00	1.00	0.00
.............................................CCTGGAATAAAGTTGACTGCGTCGC..................................................................................................................	25	1	5.00	3.00	2.00	0.00	0.00
........................................................................................................GTAAGCAACTTGATTCCAGCAA..........................................................	22	1	5.00	0.00	4.00	1.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGCAATTT.......................................................	25	1	5.00	1.00	2.00	2.00	0.00
.............................................CCTGGACTAAAGTTGACTGTGTCGC..................................................................................................................	25	1	5.00	1.00	2.00	2.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGT............................................................	20	1	5.00	0.00	2.00	3.00	0.00
.............................................CCTGGAATAAAGTTGACTGCGTCGCC.................................................................................................................	26	1	4.00	0.00	3.00	1.00	0.00
........................................................................................................GTCATCAACTTGATTCCAGCA...........................................................	21	1	4.00	0.00	2.00	2.00	0.00
........................................................................................................GTCACCAACTTGATTCCAGCA...........................................................	21	1	4.00	1.00	3.00	0.00	0.00
........................................................................................................GTCAGCAACTTGATTCCAGAA...........................................................	21	1	4.00	0.00	3.00	1.00	0.00
........................................................................................................GTCAGCCACTTGATTCCAGCA...........................................................	21	1	4.00	0.00	0.00	4.00	0.00
........................................................................................................GTCAGCAACTTGCTTCCAGCC...........................................................	21	1	4.00	0.00	0.00	4.00	0.00
........................................................................................................GTCAGCAACTTGATTCCCGCAC..........................................................	22	1	4.00	0.00	1.00	3.00	0.00
........................................................................................................GGCAGCAACTTGATTCCAGCAT..........................................................	22	1	4.00	0.00	2.00	2.00	0.00
........................................................................................................GTCAGCACCTTGATTCCAGCAA..........................................................	22	1	4.00	0.00	3.00	1.00	0.00
........................................................................................................GGCAGCAACTTGTTTCCAGCA...........................................................	21	1	4.00	0.00	2.00	2.00	0.00

droGri2

GTTGTTTCTCTTTACTAAT--AGATATGGAAATTGGGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTAAGAG-GAAGGCTTGTGCACTGCTTACAAAGTCAGCAACTTGATTCCAGCAATTGCGGCTCAAA------------------------------------CTCAACGTTG	Size	Hit Count	Total Norm	V109 Male body
.............................................CCTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	318.00	318.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	306.00	306.00
..........................TGGAAATTGGGTTGCAGTT...........................................................................................................................................	19	1	120.00	120.00
........................................................................................................GTCAGCAACTTGATTCCAGCAA..........................................................	22	1	34.00	34.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCT................................................................................................................	27	1	32.00	32.00
.............................................CCTGGAATTAAGTTGACTGTGTAG...................................................................................................................	24	1	22.00	22.00
.............................................CCTGGAATTAAGTTGACTGTGTA....................................................................................................................	23	1	18.00	18.00
........................................................................................................GTCAGCAACTTGATTCCAGCA...........................................................	21	1	12.00	12.00
.............................................CCTGGAATTAAGTTGACCGTGTAGC..................................................................................................................	25	1	6.00	6.00
.............................................CCTGGAATTAAGTTGACTGTGT.....................................................................................................................	22	1	5.00	5.00
........................................................................................................GTCAGCAACTTGATTCCAGCAT..........................................................	22	1	5.00	5.00
.............................................CCTGGAATCAAGTTGACTGTGTAGCC.................................................................................................................	26	1	4.00	4.00
.............................................CCTGGAATTAAGTTGACAGTGTAGCC.................................................................................................................	26	1	4.00	4.00
...........................GGAAATTGGGTTGCAGTT...........................................................................................................................................	18	1	3.00	3.00
.............................................CCTGGAATAAAGTTGACTGTGTCG...................................................................................................................	24	1	3.00	3.00
.............................................CCTGGAATCAAGTTGACTGTGTAGC..................................................................................................................	25	1	3.00	3.00
.............................................CCCGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	3.00	3.00
.............................................CCTGGAATTAAGTTGACCGTGTAGCC.................................................................................................................	26	1	3.00	3.00
..............................................CCTGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	2.00	2.00
.............................................CCTGGAATTAAGTTGACTGTG......................................................................................................................	21	1	2.00	2.00
.............................................CCTGGCATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	2.00	2.00
.............................................CCTGGAATTAACTTGACTGTGTAGC..................................................................................................................	25	1	2.00	2.00
.............................................CCTGGGATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	2.00	2.00
.............................................CCTGGACTTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	2.00	2.00
.............................................CCTGGAATGAAGTTGACTGTGTAGCC.................................................................................................................	26	1	2.00	2.00
.............................................CCTGGAATTAAGTTGACTGTGTTGC..................................................................................................................	25	1	2.00	2.00
.............................................CCTGGAATTAAGTTGACGGTGTAGCC.................................................................................................................	26	1	2.00	2.00
.............................................CCTGGAATTAAGTTGACTGTGTTGCC.................................................................................................................	26	1	2.00	2.00
..............................................CTGGAATTAAGTTGACTGTGTAGC..................................................................................................................	24	1	2.00	2.00
.............................................CCTGGACTTAAGTTGACTGTGTAGC..................................................................................................................	25	1	2.00	2.00
.............................................CCTGGGATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	2.00	2.00
.............................................CCTGGAATTAAGTTGACAGTGTAGC..................................................................................................................	25	1	2.00	2.00
.............................................CCTGGAATTAAGCTGACTGTGTAGC..................................................................................................................	25	1	1.00	1.00
..........................TGGAAATTGGGTTGCACTT...........................................................................................................................................	19	1	1.00	1.00
...........................GGAAATTGCGTTGCAGTT...........................................................................................................................................	18	1	1.00	1.00
..............................................CTGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	1.00	1.00
.............................................CCTGGAATTTATTTGACTGTGTAGCC.................................................................................................................	26	1	1.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTCGC..................................................................................................................	25	1	1.00	1.00
..........................TGCAAATTGGGTTGCAGTT...........................................................................................................................................	19	1	1.00	1.00
..........................TGGGAATTGGGTTGCAGTT...........................................................................................................................................	19	1	1.00	1.00
.............................................CCCGGAATTAAGTTGACTGTGTAT...................................................................................................................	24	1	1.00	1.00
........................................................................................................GCCAGCAACTTGATTCCAGCAA..........................................................	22	1	1.00	1.00
.............................................CCTGGAATTAAGTTGACTG........................................................................................................................	19	1	1.00	1.00
........................................................................................................GTCAGCAACTTGATTCCAGCAAA.........................................................	23	1	1.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTCG...................................................................................................................	24	1	1.00	1.00
.............................................CATGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	1.00	1.00
.............................................CCTGGATTTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	1.00	1.00
.............................................CCTGGAATTAGGTTGACTGTGTAGCC.................................................................................................................	26	1	1.00	1.00
.............................................CCTGGAATTAACTTGACTGTGTAGCC.................................................................................................................	26	1	1.00	1.00
.............................................CCTGCAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	1.00	1.00
.............................................CCTGGAGTTAAGTTGACTGTGTA....................................................................................................................	23	1	1.00	1.00
..........................TGGAAATTGGGTTACAGTT...........................................................................................................................................	19	1	1.00	1.00
.............................................CGTGGAATTAAGTTGACTGTGT.....................................................................................................................	22	1	1.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTATC..................................................................................................................	25	1	1.00	1.00
........................................................................................................GTCAGCCACTTGATTCCAGCAA..........................................................	22	1	1.00	1.00
.............................................CCTGGAATAAAGTTGACTGTGTCGC..................................................................................................................	25	1	1.00	1.00
.............................................CCTGGAATAAAGTTGACTGTGTTG...................................................................................................................	24	1	1.00	1.00
.............................................CCTGGCATTAAGTTGACTGTGTA....................................................................................................................	23	1	1.00	1.00
.............................................CCAGGAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	1.00	1.00
..........................TGGAAATTGGGTTGCAGAT...........................................................................................................................................	19	1	1.00	1.00
........................................................................................................GTCATCAACTTGATTCCAGCAA..........................................................	22	1	1.00	1.00
........................................................................................................GTCAGCAACTTGATTCCAGCT...........................................................	21	1	1.00	1.00
...........................TGAAATTGGGTTGCAGTT...........................................................................................................................................	18	1	1.00	1.00
..........................TGTAAATTGGGTTGCAGTT...........................................................................................................................................	19	1	1.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTAGCCTT...............................................................................................................	28	1	1.00	1.00
........................................................................................................GTCAGCAACTTGATTCCCGCAA..........................................................	22	1	1.00	1.00
.............................................CCTGGAATTAAGTTGATTGTGTA....................................................................................................................	23	1	1.00	1.00
..........................TGGAGATTGGGTTGCAGTT...........................................................................................................................................	19	1	1.00	1.00
.............................................CCTGTAATTAAGTTGACTGTGTAGC..................................................................................................................	25	1	1.00	1.00
.............................................CCTGGAATTAAGTTCACTGTGTAGC..................................................................................................................	25	1	1.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTGGC..................................................................................................................	25	1	1.00	1.00
..............................................CCTGAATTAAGTTGACTGTGTAGCC.................................................................................................................	25	1	1.00	1.00
........................TATGGAAATTGGGTTGCAGTT...........................................................................................................................................	21	1	1.00	1.00
.............................................CCAGGAATTAAGTTGACTGTGTAGCCT................................................................................................................	27	1	1.00	1.00
..........................TGGAAACTGGGTTGCAGTT...........................................................................................................................................	19	1	1.00	1.00
.............................................CCTGGAATTAAGCTGACTGTGTAGCC.................................................................................................................	26	1	1.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTCGCC.................................................................................................................	26	1	1.00	1.00
.............................................CCTGGAATAAAGTTGACTGTGTCGCC.................................................................................................................	26	1	1.00	1.00
.............................................CCTGCAATTAAGTTGACTCTGTAGC..................................................................................................................	25	1	1.00	1.00
.............................................CCTGGAATTAAGTTGCCTGTGTAAC..................................................................................................................	25	1	1.00	1.00
.........................ATGGAAATTGGGTTGCAGTT...........................................................................................................................................	20	1	1.00	1.00
.............................................CCTGGAATTAAGTTGACTGTCTAGC..................................................................................................................	25	1	1.00	1.00
.............................................CCTGGAATAAAGTTGACTGTCTAGC..................................................................................................................	25	1	1.00	1.00
.............................................CCTGGAATTAAGTTGACTGTGTC....................................................................................................................	23	1	1.00	1.00
.............................................CCCGGAATTAAGTTGACTGTGTAGCC.................................................................................................................	26	1	1.00	1.00
.......................ATATGGAAATTGGGTTGCAGTT...........................................................................................................................................	22	1	1.00	1.00

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image