Possible Orthologs for dme-mir-284

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3R:13050845-13050974 +	94.67	ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCTCAACAATG ATAACGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATACTGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCGCAACAATG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ........................CCTGGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 111259.00 18.00 94052.00 6869.00 10320.00 ........................CCTGGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 62496.00 23.00 52569.00 6868.00 3036.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCT............................................................................... 27 1 6840.00 1.00 5989.00 781.00 69.00 ..................................................................................GTCAGCAACTTGATTCCAGCAA.......................... 22 1 4973.00 75.00 4320.00 229.00 349.00 ..................................................................................GTCAGCAACTTGATTCCAGC............................ 20 1 3862.00 0.00 3777.00 71.00 14.00 ........................CCTGGAATTAAGTTGACTGTGTAG.................................................................................. 24 1 3762.00 3.00 3080.00 568.00 111.00 ..................................................................................GTCAGCAACTTGATTCCAGCA........................... 21 1 3735.00 24.00 3579.00 89.00 43.00 ........................CCTGGAATTAAGTTGACTGTGTAGAC................................................................................ 26 1 1985.00 0.00 1702.00 91.00 192.00 ........................CCTGGAATTAAGTTGACTGTGT.................................................................................... 22 1 1767.00 0.00 1615.00 142.00 10.00 ........................CCTGGAATTAAGTTGACTGTGTAGCT................................................................................ 26 1 1546.00 0.00 1384.00 149.00 13.00 ..................................................................................GTCAGCAACTTGATTCCAGCAC.......................... 22 1 1225.00 0.00 1118.00 50.00 57.00 ........................CCTGGAATTAAGTTGACTG....................................................................................... 19 1 910.00 0.00 812.00 85.00 13.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCC............................................................................... 27 1 652.00 0.00 582.00 61.00 9.00 ........................CCTGGAATTAAGTTGACTGTGG.................................................................................... 22 1 343.00 0.00 312.00 30.00 1.00 ........................CCTGGAATTAAGTTGACTGTTTAGCC................................................................................ 26 1 322.00 0.00 295.00 7.00 20.00 ........................CCTGGAATTAAGTTGACTGTGTCGCC................................................................................ 26 1 318.00 0.00 259.00 25.00 34.00 ........................CCTGGAATTAAGTTGACTGTG..................................................................................... 21 1 314.00 0.00 283.00 28.00 3.00 ........................CCTGGAATTAAGTTGACTGTGC.................................................................................... 22 1 302.00 0.00 284.00 17.00 1.00 ........................CCTGGAATTAAGTTGACTTTGTAGCC................................................................................ 26 1 275.00 0.00 246.00 9.00 20.00 ........................CCTGGAATTAAGTTGACxxTGTAGCC................................................................................ 24 1 261.00 0.00 230.00 13.00 18.00 ..................................................................................GTCAGCAACTTGATTCCAGCAT.......................... 22 1 258.00 0.00 245.00 9.00 4.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCG............................................................................... 27 1 250.00 0.00 217.00 29.00 4.00 ........................CCTGGAATTAAGTTGACTGTGTA................................................................................... 23 1 241.00 0.00 200.00 31.00 10.00 ........................CCTGGAATTAAGTTGACTGTGTAGA................................................................................. 25 1 224.00 0.00 162.00 59.00 3.00 ........................CCTGGAATTAAGTTGACTGTGTGG.................................................................................. 24 1 183.00 0.00 148.00 28.00 7.00 ........................CCTGGAATTAAGTTGACTGT...................................................................................... 20 1 179.00 0.00 153.00 25.00 1.00 ........................CCTGGAATTAAGTTGACTGTGTCGC................................................................................. 25 1 175.00 0.00 150.00 14.00 11.00 ........................CCTTGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 160.00 0.00 134.00 5.00 21.00 ........................CCTGGAATTAGGTTGACTGTGTAGCC................................................................................ 26 1 153.00 0.00 141.00 10.00 2.00 ........................CCTGGAATTAAGTTGACTGTxTAGCC................................................................................ 25 1 146.00 0.00 116.00 11.00 19.00 ........................CCTGGAATTAAGTTGACTGTGTAGG................................................................................. 25 1 142.00 1.00 108.00 21.00 12.00 ........................CCTGGAATTAATTTGACTGTGTAGCC................................................................................ 26 1 137.00 1.00 125.00 4.00 7.00 ........................CCTGAAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 131.00 0.00 115.00 7.00 9.00 ..................................................................................GTCAGCAACTTGATTCCAGCG........................... 21 1 131.00 0.00 125.00 5.00 1.00 ........................CCTGGAATTAAGTTGACTGTGTAGCA................................................................................ 26 1 124.00 0.00 102.00 15.00 7.00 ........................CCTGGAATTAAGTTGACTCTGTAGCC................................................................................ 26 1 117.00 1.00 104.00 3.00 9.00 ........................CCTGGAATTAAGTTGACTGTGTAAC................................................................................. 25 1 117.00 0.00 98.00 13.00 6.00 .........................CTGGAATTAAGTTGACTGTGTAGCC................................................................................ 25 1 115.00 0.00 99.00 6.00 10.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAA......................... 23 1 115.00 0.00 104.00 9.00 2.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAT......................... 23 1 114.00 0.00 105.00 6.00 3.00 ..............................ATTAAGTTGACTGTGTAGCC................................................................................ 20 1 111.00 0.00 88.00 11.00 12.00 ........................CCTGGAATTAAGTTGACTGTTTAGC................................................................................. 25 1 92.00 0.00 83.00 6.00 3.00 ........................CCTGGAATTAAGTTGACTGTCTAGCC................................................................................ 26 1 91.00 0.00 75.00 0.00 16.00 ........................CCTGGAATTAAGTTGACTGTGTAA.................................................................................. 24 1 85.00 0.00 81.00 4.00 0.00 ..................................................................................GTCAGCAACTTxATTCCAGC............................ 19 1 84.00 0.00 82.00 2.00 0.00 ........................CCTTGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 80.00 0.00 64.00 12.00 4.00 ........................CCTGGAATTAAGTTGGCTGTGTAGCC................................................................................ 26 1 80.00 0.00 69.00 2.00 9.00 ........................CCTGGAATTAAGTTGACTGCGTAGCC................................................................................ 26 1 80.00 0.00 68.00 4.00 8.00 ........................CCTGGGATTAAGTTGACTGTGTAGCC................................................................................ 26 1 79.00 0.00 69.00 7.00 3.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCTT.............................................................................. 28 1 77.00 0.00 50.00 26.00 1.00 ........................CCTGGAATTAAGCTGACTGTGTAGCC................................................................................ 26 1 75.00 0.00 62.00 8.00 5.00 ........................CCTCGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 74.00 0.00 63.00 2.00 9.00 ..................................................................................GTCAGCAACTTGATTCCAG............................. 19 1 68.00 0.00 67.00 0.00 1.00 ..................................................................................GTCAGCAACTTTATTCCAGC............................ 20 1 67.00 0.00 67.00 0.00 0.00 ........................CCTGGAATTAAGTTGACTGCGTAGC................................................................................. 25 1 63.00 0.00 55.00 5.00 3.00 ........................CCTGGAATTAAGTTGACTGTGCAGCC................................................................................ 26 1 61.00 0.00 55.00 3.00 3.00 ........................CCTGGAATTAAGTTGGCTGTGTAGC................................................................................. 25 1 58.00 0.00 55.00 2.00 1.00 ........................CCTGGAATTAAGTTGACTGTGTAGT................................................................................. 25 1 57.00 0.00 51.00 5.00 1.00 .........................CCTGAATTAAGTTGACTGTGTAGCC................................................................................ 25 1 57.00 0.00 47.00 2.00 8.00 ........................CCTGGGATTAAGTTGACTGTGTAGC................................................................................. 25 1 57.00 1.00 49.00 5.00 2.00 ..................................................................................GTCAGCAACTTGATTCCAGCAG.......................... 22 1 56.00 1.00 50.00 1.00 4.00 ........................CCTGGAATTAAGTTGACTGTGTGGCC................................................................................ 26 1 54.00 0.00 45.00 4.00 5.00 ........................CCTGGAATTAAGTTGACTGTGTGAC................................................................................. 25 1 54.00 0.00 54.00 0.00 0.00 ........................CCTGGAATTAAGTTGACTxTGTAGCC................................................................................ 25 1 54.00 0.00 53.00 1.00 0.00 .........................CTGGAATTAAGTTGACTGTGTAGC................................................................................. 24 1 54.00 0.00 48.00 3.00 3.00 ........................CCTGGAATTAAGTTGACTGGGTAGCC................................................................................ 26 1 53.00 0.00 45.00 3.00 5.00 ........................CCTGGAATTAAGTTGACTGTGTT................................................................................... 23 1 52.00 0.00 48.00 4.00 0.00 ........................CCCGGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 52.00 0.00 42.00 5.00 5.00 ........................CCTCGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 50.00 0.00 45.00 2.00 3.00 ........................CCTGGAATTAAGTTGACCGTGTAGCC................................................................................ 26 1 45.00 0.00 36.00 4.00 5.00 ..............................ATTAAGTTGACTGTGTAGC................................................................................. 19 1 45.00 0.00 37.00 4.00 4.00 ........................CCCGGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 45.00 0.00 39.00 5.00 1.00 ........................CCTGGAATTAAGTTGACTGTAG.................................................................................... 22 1 44.00 0.00 40.00 2.00 2.00 ........................CCTGGAATTAGGTTGACTGTGTAGC................................................................................. 25 1 44.00 0.00 38.00 6.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCT........................... 21 1 43.00 0.00 42.00 1.00 0.00 .............................AATTAAGTTGACTGTGTAGCC................................................................................ 21 1 42.00 0.00 38.00 2.00 2.00 ...............................TTAAGTTGACTGTGTAGCC................................................................................ 19 1 42.00 0.00 31.00 3.00 8.00 .........................CCTGAATTAAGTTGACTGTGTAGC................................................................................. 24 1 41.00 0.00 34.00 4.00 3.00 ........................CCTGGAATTAAGTTGACTGGGTAGC................................................................................. 25 1 40.00 0.00 33.00 5.00 2.00 ........................CCTGGAATTAAGTTTACTGTGTAGCC................................................................................ 26 1 39.00 1.00 29.00 2.00 7.00 ........................CCTGGAATTAAGCTGACTGTGTAGC................................................................................. 25 1 39.00 0.00 29.00 7.00 3.00 ........................TCTGGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 38.00 0.00 33.00 1.00 4.00 ........................CCTGGAATTAAGTTGACTGTATAGCC................................................................................ 26 1 38.00 0.00 34.00 1.00 3.00 ........................CCTGGAATTAAGTTGACT........................................................................................ 18 1 38.00 0.00 35.00 2.00 1.00 ..................................................................................GTCAGCAACTTCATTCCAGC............................ 20 1 37.00 0.00 37.00 0.00 0.00 ........................CCTGGAATTAAGTCGACTGTGTAGCC................................................................................ 26 1 37.00 0.00 31.00 2.00 4.00 ........................CCTGGAATTAAGTTGACTGTGTGGC................................................................................. 25 1 37.00 0.00 30.00 6.00 1.00 ........................CCTGGAATTAAGTTGACTATGTAGCC................................................................................ 26 1 36.00 0.00 28.00 5.00 3.00 ........................CCTGGAATTAAGTTGACTGTGTAGCG................................................................................ 26 1 36.00 0.00 29.00 5.00 2.00 ........................CCTGGAATTAAGTTGACTGTGTAGTC................................................................................ 26 1 36.00 0.00 32.00 2.00 2.00 ........................CCTGGAATTAAGTTGACTGG...................................................................................... 20 1 36.00 0.00 34.00 1.00 1.00 ........................CCTGGAATTAAGTTAACTGTGTAGCC................................................................................ 26 1 36.00 0.00 30.00 3.00 3.00 ........................CCTGGAATTAAGTTGACTGTGTAGCTT............................................................................... 27 1 35.00 0.00 31.00 3.00 1.00 ........................CCTGGAATTAAGTTGACTGTGTATCC................................................................................ 26 1 34.00 0.00 28.00 1.00 5.00 ........................CCTGGAATTAAGTTGACTTTGTAGC................................................................................. 25 1 33.00 0.00 28.00 4.00 1.00 ........................CCTGGAATTAAGTTGACTGTCTAGC................................................................................. 25 1 32.00 0.00 29.00 1.00 2.00 ..................................................................................GTCAGCAACTTxATTCCAGCAA.......................... 21 1 32.00 0.00 28.00 1.00 3.00 ....................AGTTCCTGGAATTAAGTTGACTG....................................................................................... 23 1 31.00 0.00 10.00 0.00 21.00 ........................CCTGTAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 31.00 0.00 23.00 5.00 3.00 ..................................................................................GTCAGCAACTTxATTCCAGCA........................... 20 1 30.00 0.00 29.00 0.00 1.00 ........................CCTGGAATTAAGTTGACTTTGTAG.................................................................................. 24 1 30.00 0.00 26.00 3.00 1.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_0:13609227-13609356 +	95.43	ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCTCAACAATG ATAATGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATACTGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCGCAACAATG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..................................................................................GTCAGCAACTTGATTCCAGCA........................... 21 1 7381.00 282.00 120.00 6979.00 ..................................................................................GTCAGCAACTTGATTCCAGCAA.......................... 22 1 3910.00 490.00 549.00 2871.00 ........................CCTGGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 3624.00 907.00 609.00 2108.00 ........................CCTGGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 2680.00 503.00 908.00 1269.00 ........................CCTGGAATTAAGTTGACTGTGTAG.................................................................................. 24 1 454.00 174.00 51.00 229.00 ........................CCTGGAATTAAGTTGACTGTGT.................................................................................... 22 1 199.00 51.00 5.00 143.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCT............................................................................... 27 1 180.00 60.00 6.00 114.00 ..................................................................................GTCAGCAACTTGATTCCAGCAT.......................... 22 1 170.00 25.00 2.00 143.00 ........................CCTGGAATTAAGTTGACTGTG..................................................................................... 21 1 164.00 38.00 3.00 123.00 ..................................................................................GTCAGCAACTTGATTCCAGCAC.......................... 22 1 118.00 13.00 4.00 101.00 ..................................................................................GTCAGCAACTTGATTCCAGC............................ 20 1 111.00 3.00 1.00 107.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAA......................... 23 1 78.00 10.00 8.00 60.00 ........................CCTGGAATTAAGTTGACTGTGTA................................................................................... 23 1 70.00 29.00 3.00 38.00 ..................................................................................GTCAGCAACTTGATTCCAG............................. 19 1 60.00 0.00 0.00 60.00 .....GGGTAATTGCGTTGCAGTT.......................................................................................................... 19 1 51.00 6.00 18.00 27.00 ....TGGGTAATTGCGTTGCAGTT.......................................................................................................... 20 1 48.00 3.00 24.00 21.00 ..................................................................................GTCAGCAACTTGATTCCAGCT........................... 21 1 46.00 3.00 0.00 43.00 ...................................................................................TCAGCAACTTGATTCCAGCA........................... 20 1 39.00 0.00 0.00 39.00 .........................CTGGAATTAAGTTGACTGTGTAGC................................................................................. 24 1 32.00 7.00 7.00 18.00 ...................................................................................TCAGCAACTTGATTCCAGCAA.......................... 21 1 27.00 6.00 2.00 19.00 ..................................................................................GTCAGCAACTTGATTCCAGT............................ 20 1 27.00 1.00 0.00 26.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAT......................... 23 1 27.00 1.00 1.00 25.00 .........................CTGGAATTAAGTTGACTGTGTAGCC................................................................................ 25 1 25.00 4.00 10.00 11.00 ..................................................................................GTCAGCAACTTGATTCCAGCTT.......................... 22 1 24.00 1.00 0.00 23.00 ........................CCTGGAATTAAGTTGACTGT...................................................................................... 20 1 20.00 3.00 0.00 17.00 ...ATGGGTAATTGCGTTGCAGTT.......................................................................................................... 21 1 19.00 4.00 6.00 9.00 ..................................................................................GTCAGCAACTTGATTCCAACA........................... 21 1 15.00 1.00 0.00 14.00 ..................................................................................TTCAGCAACTTGATTCCAGCA........................... 21 1 15.00 0.00 1.00 14.00 ........................CCTGGAATTAAGTTGACTGTGTAGCT................................................................................ 26 1 15.00 5.00 2.00 8.00 ........................CCTGGAATTAAGTTGACTGTGTAGA................................................................................. 25 1 14.00 9.00 0.00 5.00 ..................................................................................GTCAGCAACTTGATTCCAGCC........................... 21 1 13.00 0.00 0.00 13.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCTT.............................................................................. 28 1 13.00 13.00 0.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCATT......................... 23 1 13.00 0.00 0.00 13.00 ..................................................................................ATCAGCAACTTGATTCCAGCA........................... 21 1 12.00 1.00 1.00 10.00 .....................................................................................AGCAACTTGATTCCAGCA........................... 18 1 12.00 0.00 1.00 11.00 ........................CCTGGAATTAAGTTGACTATGTAGC................................................................................. 25 1 11.00 5.00 0.00 6.00 ..................................................................................GTCAGCAAATTGATTCCAGCA........................... 21 1 11.00 1.00 1.00 9.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAAA........................ 24 1 11.00 0.00 2.00 9.00 ..................................................................................GTCATCAACTTGATTCCAGCA........................... 21 1 11.00 1.00 0.00 10.00 ..................................................................................GTCAGCAGCTTGATTCCAGCA........................... 21 1 9.00 0.00 1.00 8.00 ..................................................................................TTCAGCAACTTGATTCCAGCAA.......................... 22 1 9.00 0.00 0.00 9.00 ..................................................................................ATCAGCAACTTGATTCCAGCAA.......................... 22 1 9.00 1.00 3.00 5.00 ..................................................................................GTCAGCAACTTGATTCCATCAA.......................... 22 1 9.00 4.00 0.00 5.00 ..................................................................................GTCAGCAACTTGATTCCAACAA.......................... 22 1 9.00 5.00 0.00 4.00 ........................CCTGGAATTAAGTTGACTGCGTAGC................................................................................. 25 1 9.00 3.00 2.00 4.00 ..................................................................................GTCGGCAACTTGATTCCAGCA........................... 21 1 9.00 0.00 0.00 9.00 .................................................................................CGTCAGCAACTTGATTCCAGCA........................... 22 1 9.00 1.00 0.00 8.00 ........................CCTGGAATTAAGTTGACTGTGTAGT................................................................................. 25 1 8.00 3.00 2.00 3.00 ........................CCTGGAATTAAGTTGACxxTGTAGCC................................................................................ 24 1 8.00 0.00 4.00 4.00 ..................................................................................GTCAGCAACTTGATTCCAA............................. 19 1 8.00 1.00 0.00 7.00 ........................CCTGGAATTAAGTTGACTGTGTT................................................................................... 23 1 8.00 2.00 0.00 6.00 ..................................................................................GTCACCAACTTGATTCCAGCA........................... 21 1 8.00 0.00 0.00 8.00 ..................................................................................GTCAGCAACTTGGTTCCAGCA........................... 21 1 8.00 0.00 1.00 7.00 ..................................................................................GTCAGCAACTTGATTCCGGCAA.......................... 22 1 8.00 0.00 1.00 7.00 ..................................................................................GTCAGCAACTTGATCCCAGCA........................... 21 1 8.00 1.00 0.00 7.00 ........................CCTGGAATTAAGTTGATTGTGTAGCC................................................................................ 26 1 7.00 0.00 7.00 0.00 ..................................................................................GTCATCAACTTGATTCCAGCAA.......................... 22 1 7.00 0.00 1.00 6.00 ..................................................................................GTCAGCAACTTGATTCCACCAA.......................... 22 1 7.00 6.00 0.00 1.00 ........................CCTTGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 7.00 1.00 2.00 4.00 ..................................................................................GTCAGCAACTTGATTCCATCA........................... 21 1 7.00 1.00 0.00 6.00 ........................TCTGGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 7.00 1.00 3.00 3.00 ........................CCTGGAATTAAGTTGACTGTGCAGCC................................................................................ 26 1 7.00 1.00 1.00 5.00 ..................................................................................GTCAGCAACTTGATTCCACCA........................... 21 1 7.00 1.00 0.00 6.00 ..................................................................................GTCAGCAACCTGATTCCAGCA........................... 21 1 7.00 1.00 0.00 6.00 .......................................................................................CAACTTGATTCCAGCAATTGCG..................... 22 1 7.00 0.00 3.00 4.00 .....................................................................................AGCAACTTGATTCCAGCAA.......................... 19 1 7.00 0.00 1.00 6.00 ........................CCTGGAATTAAGTTGACTGTGA.................................................................................... 22 1 6.00 4.00 0.00 2.00 ..................................................................................GTCAGCAACTTxATTCCAGCA........................... 20 1 6.00 1.00 0.00 5.00 ........................CCTGGAATTAAGTTGACTGTTTAGC................................................................................. 25 1 6.00 1.00 1.00 4.00 ........................CCTGGAATTAAGCTGACTGTGTAGC................................................................................. 25 1 6.00 0.00 4.00 2.00 ....................AGTTCCTGGAATTAAGTTGACT........................................................................................ 22 1 6.00 2.00 0.00 4.00 ..................................................................................GTCAGCAACTTGATTCAAGCA........................... 21 1 6.00 0.00 1.00 5.00 ........................CCTGGAATTAAGTTGACTCTGTAGCC................................................................................ 26 1 6.00 4.00 1.00 1.00 ..................................................................................GTCAGAAACTTGATTCCAGCA........................... 21 1 6.00 0.00 0.00 6.00 ..................................................................................GCCAGCAACTTGATTCCAGCA........................... 21 1 6.00 0.00 0.00 6.00 ..................................................................................GCCAGCAACTTGATTCCAGCAA.......................... 22 1 6.00 2.00 0.00 4.00 ........................CCTGGAATTAAGTTGACTGTGTAGCA................................................................................ 26 1 6.00 1.00 1.00 4.00 ..................................................................................GTCAGCGACTTGATTCCAGCA........................... 21 1 6.00 0.00 0.00 6.00 ..................................................................................GTCAGCAACTTGACTCCAGCA........................... 21 1 6.00 1.00 0.00 5.00 ..................................................................................GTCAGCAACTTGCTTCCAGCA........................... 21 1 6.00 1.00 0.00 5.00 ..................................................................................GTCAGCAACTTGATTCCGGCA........................... 21 1 6.00 0.00 1.00 5.00 ........................CCTGGGATTAAGTTGACTGTGTAGC................................................................................. 25 1 6.00 0.00 6.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGTA........................... 21 1 5.00 0.00 0.00 5.00 .................................................................................CGTCAGCAACTTGATTCCAGCAA.......................... 23 1 5.00 0.00 0.00 5.00 ........................CCTGGAATTAAGTTGACTATGTAGCC................................................................................ 26 1 5.00 4.00 0.00 1.00 ..................................................................................GTCAGCAACTTGATTCCCGCA........................... 21 1 5.00 0.00 0.00 5.00 ........................CCTGGAATTAAGTTCACTGTGTAGC................................................................................. 25 1 5.00 1.00 1.00 3.00 ..................................................................................GTCAGCAACTTGACTCCAGCAA.......................... 22 1 5.00 1.00 0.00 4.00 ........................CCTGGAATTAAGTTAACTGTGTAGCC................................................................................ 26 1 5.00 2.00 2.00 1.00 ..................................................................................GTCAGCAACTCGATTCCAGCA........................... 21 1 5.00 0.00 0.00 5.00 ..................................................................................GTCAGCAACTTGATTCCA.............................. 18 1 5.00 0.00 0.00 5.00 ........................CCTGGAATTAAGTTGACTGCGTAGCC................................................................................ 26 1 5.00 2.00 1.00 2.00 ..................................................................................GTCAGCAATTTGATTCCAGCA........................... 21 1 5.00 0.00 1.00 4.00 ..................................................................................CTCAGCAACTTGATTCCAGCA........................... 21 1 5.00 0.00 0.00 5.00 ........................CCTGGAATTAAGTTGACTTTGTAGCC................................................................................ 26 1 5.00 4.00 0.00 1.00 ....................................................................................CAGCAACTTGATTCCAGCAA.......................... 20 1 5.00 1.00 2.00 2.00 .....................................................................................GTCAACTTGATTCCAGCA........................... 18 2 2.50 0.00 0.00 2.50 ........................CCTGGAATTAAGTTGACTGTGCAGC................................................................................. 25 1 5.00 2.00 0.00 3.00 .........................CCTGAATTAAGTTGACTGTGTAGC................................................................................. 24 1 5.00 0.00 2.00 3.00 ....................................................................................CAGCAACTTGATTCCAGCA........................... 19 1 5.00 0.00 0.00 5.00 ..................................................................................GTCAGCAACTTGATTCTAGCAA.......................... 22 1 5.00 1.00 1.00 3.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	chr3R:12662228-12662357 -	93.92	ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCTCAACAATG ATAATGGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAGTACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAATATTCCGCAACAATG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ........................CCTGGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 24887.00 13.00 144.00 110.00 418.00 24202.00 ........................CCTGGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 18693.00 13.00 187.00 306.00 610.00 17577.00 ..................................................................................GTCAGCAACTTGATTCCAGCAA.......................... 22 1 3489.00 71.00 578.00 243.00 1138.00 1459.00 ..................................................................................GTCAGCAACTTGATTCCAGCA........................... 21 1 3104.00 32.00 732.00 98.00 1383.00 859.00 ........................CCTGGAATTAAGTTGACTGTGTAG.................................................................................. 24 1 1346.00 1.00 40.00 47.00 164.00 1094.00 ..................................................................................GTCAGCAACTTGATTCCAGC............................ 20 1 1133.00 0.00 15.00 2.00 37.00 1079.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCT............................................................................... 27 1 1075.00 0.00 0.00 6.00 24.00 1045.00 ..................................................................................GTCAGCAACTTGATTCCAGCAC.......................... 22 1 636.00 0.00 9.00 2.00 53.00 572.00 ........................CCTGGAATTAAGTTGACTGTGT.................................................................................... 22 1 507.00 0.00 31.00 20.00 117.00 339.00 ........................CCTGGAATTAAGTTGACTGTGTAGAC................................................................................ 26 1 505.00 0.00 0.00 0.00 0.00 505.00 ........................CCTGGAATTAAGTTGACTGTGTAGCT................................................................................ 26 1 312.00 0.00 0.00 1.00 1.00 310.00 ........................CCTGGAATTAAGTTGACTG....................................................................................... 19 1 153.00 0.00 1.00 3.00 1.00 148.00 ........................CCTGGAATTAAGTTGACTGTG..................................................................................... 21 1 140.00 0.00 26.00 5.00 78.00 31.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCC............................................................................... 27 1 134.00 0.00 0.00 0.00 1.00 133.00 ..................................................................................GTCAGCAACTTGATTCCAGCAT.......................... 22 1 131.00 1.00 25.00 13.00 36.00 56.00 ........................CCTGGAATTAAGTTGACTGTTTAGCC................................................................................ 26 1 102.00 0.00 1.00 0.00 2.00 99.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAA......................... 23 1 96.00 1.00 14.00 8.00 39.00 34.00 ........................CCTGGAATTAAGTTGACTTTGTAGCC................................................................................ 26 1 93.00 0.00 0.00 0.00 4.00 89.00 .....GGGTGATTGCGTTGCAGTT.......................................................................................................... 19 1 88.00 8.00 23.00 10.00 43.00 4.00 ........................CCTGGAATTAAGTTGACTGTGTA................................................................................... 23 1 82.00 0.00 7.00 6.00 19.00 50.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAT......................... 23 1 68.00 0.00 3.00 0.00 9.00 56.00 ........................CCTGGAATTAAGTTGACTGTGC.................................................................................... 22 1 65.00 0.00 0.00 0.00 0.00 65.00 ..................................................................................GTCAGCAACTTGATTCCAGCT........................... 21 1 61.00 0.00 16.00 0.00 21.00 24.00 ........................CCTGGAATTAAGTTGACTGTGG.................................................................................... 22 1 59.00 0.00 0.00 0.00 0.00 59.00 ........................CCTGGAATTAAGTTGACTGTGTGG.................................................................................. 24 1 55.00 0.00 0.00 0.00 1.00 54.00 ........................CCTGGAATTAATTTGACTGTGTAGCC................................................................................ 26 1 52.00 0.00 0.00 0.00 0.00 52.00 ........................CCTGGAATTAAGTTGACTGTTTAGC................................................................................. 25 1 46.00 0.00 4.00 0.00 10.00 32.00 ..................................................................................GTCAGCAACTTGATTCCAGCCA.......................... 22 1 46.00 1.00 16.00 1.00 24.00 4.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCG............................................................................... 27 1 46.00 0.00 0.00 0.00 0.00 46.00 ........................CCTGGAATTAAGTTGACTGTGTAAC................................................................................. 25 1 44.00 0.00 0.00 0.00 0.00 44.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCTT.............................................................................. 28 1 44.00 0.00 0.00 0.00 1.00 43.00 ........................CCTGGAATTAAGTTGACTGTGTAGA................................................................................. 25 1 44.00 0.00 0.00 2.00 3.00 39.00 ..................................................................................GTCAGCAACTTGATTCCAGCC........................... 21 1 43.00 1.00 5.00 0.00 26.00 11.00 ......GGTGATTGCGTTGCAGTT.......................................................................................................... 18 1 39.00 5.00 12.00 1.00 20.00 1.00 ........................CCTGGAATTAAGTTGACxxTGTAGCC................................................................................ 24 1 38.00 0.00 0.00 0.00 0.00 38.00 ........................CCTGGAATTAAGTTGACTGT...................................................................................... 20 1 36.00 0.00 1.00 2.00 7.00 26.00 ........................CCTGGAATTAAGTTGACTGTxTAGCC................................................................................ 25 1 35.00 0.00 0.00 0.00 0.00 35.00 ........................CCTGAAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 35.00 0.00 0.00 0.00 0.00 35.00 ........................CCTGGAATTAAGTTGACTGGGTAGCC................................................................................ 26 1 34.00 0.00 0.00 0.00 0.00 34.00 ........................CCTGGAATTAAGTTGACTGTGTATC................................................................................. 25 1 34.00 0.00 8.00 1.00 25.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTAA.................................................................................. 24 1 33.00 0.00 1.00 1.00 3.00 28.00 ..................................................................................GTCAGCAACTTGCTTCCAGCA........................... 21 1 32.00 0.00 7.00 0.00 25.00 0.00 .........................CTGGAATTAAGTTGACTGTGTAGCC................................................................................ 25 1 29.00 0.00 2.00 0.00 1.00 26.00 ..................................................................................GTCAGCAACTTGATTCCAGCG........................... 21 1 29.00 0.00 1.00 0.00 4.00 24.00 ..................................................................................GTCAGCAACTTGATTCCAG............................. 19 1 29.00 0.00 5.00 1.00 5.00 18.00 ........................CCTTGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 28.00 0.00 0.00 0.00 0.00 28.00 ........................CCTGGAATTAAGTTGACTGTGCAGC................................................................................. 25 1 28.00 0.00 0.00 1.00 8.00 19.00 ........................CCTCGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 28.00 0.00 0.00 0.00 0.00 28.00 ..................................................................................GTCAGCAACTTGATTCCAGCAG.......................... 22 1 27.00 0.00 1.00 0.00 3.00 23.00 ........................CCTGGAATTAAGTTGACTGTGTAGG................................................................................. 25 1 27.00 1.00 0.00 0.00 0.00 26.00 ........................CCTGGAATTAAGTTGACTGCGTAGCC................................................................................ 26 1 26.00 0.00 0.00 0.00 2.00 24.00 ..............................ATTAAGTTGACTGTGTAGCC................................................................................ 20 1 26.00 0.00 0.00 1.00 0.00 25.00 ........................CCTTGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 25.00 0.00 0.00 0.00 1.00 24.00 ........................CCTGGAATTAAGTTGACTGCGTAGC................................................................................. 25 1 25.00 1.00 0.00 0.00 0.00 24.00 ........................CCTGGAATTAAGTTGACTGGGTAGC................................................................................. 25 1 25.00 0.00 0.00 0.00 1.00 24.00 ..................................................................................GGCAGCAACTTGATTCCAGCA........................... 21 1 25.00 0.00 3.00 0.00 21.00 1.00 ........................CCTGGGATTAAGTTGACTGTGTAGC................................................................................. 25 1 24.00 0.00 2.00 0.00 15.00 7.00 ........................CCTGGAATTAAGTTGGCTGTGTAGC................................................................................. 25 1 24.00 0.00 0.00 1.00 2.00 21.00 ........................CCTGGAATTAAGTTGACTTTGTAGC................................................................................. 25 1 23.00 0.00 0.00 1.00 1.00 21.00 ........................CCTGGAATTAAGTTGACTTTGTAG.................................................................................. 24 1 23.00 0.00 0.00 1.00 1.00 21.00 ........................CCTGGAATTAAGTTGACTGTGTAC.................................................................................. 24 1 23.00 0.00 0.00 0.00 1.00 22.00 ..................................................................................GTCAGCAACTTxATTCCAGC............................ 19 1 22.00 0.00 0.00 0.00 0.00 22.00 ..................................................................................GTCAGCAACTTGATTCCCGCA........................... 21 1 22.00 0.00 4.00 0.00 18.00 0.00 ..................................................................................GTCAGCAACTTGATTCCCGCAA.......................... 22 1 21.00 0.00 5.00 0.00 15.00 1.00 ........................CCTGGAATTAAGTTGACTGTCTAGCC................................................................................ 26 1 21.00 0.00 0.00 0.00 0.00 21.00 .........................CTGGAATTAAGTTGACTGTGTAGC................................................................................. 24 1 21.00 0.00 0.00 1.00 1.00 19.00 ........................CCTGGAATTAAGTTGACTGTGCAGCC................................................................................ 26 1 20.00 0.00 0.00 0.00 3.00 17.00 ........................CCTGGAATTAAGTTGACTGTGTAGCA................................................................................ 26 1 20.00 0.00 0.00 2.00 0.00 18.00 ........................CCTGCAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 20.00 0.00 0.00 0.00 0.00 20.00 ........................CCTGGAATTAAGTTGACTGTGTGAC................................................................................. 25 1 19.00 0.00 0.00 0.00 0.00 19.00 ........................CCTGGAATTAAGTTGACTGTGTATCC................................................................................ 26 1 19.00 0.00 2.00 0.00 13.00 4.00 ..................................................................................GTCAGCAACTTGATTCCATCA........................... 21 1 18.00 0.00 4.00 0.00 13.00 1.00 ..................................................................................GTCAGCAACTTTATTCCAGC............................ 20 1 18.00 0.00 0.00 0.00 0.00 18.00 ........................CCTGGACTTAAGTTGACTGTGTAGCC................................................................................ 26 1 18.00 0.00 1.00 0.00 2.00 15.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCA............................................................................... 27 1 17.00 0.00 0.00 0.00 1.00 16.00 ........................CCTGGAATTAAGTTGGCTGTGTAGCC................................................................................ 26 1 17.00 0.00 0.00 0.00 0.00 17.00 ........................CCTCGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 17.00 0.00 0.00 0.00 0.00 17.00 ..................................................................................GTCAGCAACTTGCTTCCAGCAA.......................... 22 1 17.00 0.00 0.00 0.00 17.00 0.00 ....TGGGTGATTGCGTTGCAGTT.......................................................................................................... 20 1 17.00 1.00 7.00 6.00 3.00 0.00 ........................CCTGGCATTAAGTTGACTGTGTAGCC................................................................................ 26 1 17.00 1.00 0.00 0.00 10.00 6.00 ........................CCTGGAATTAAGTTTACTGTGTAGCC................................................................................ 26 1 16.00 0.00 0.00 0.00 0.00 16.00 .............................AATTAAGTTGACTGTGTAGCC................................................................................ 21 1 16.00 0.00 0.00 0.00 1.00 15.00 ........................CCTGGAATTAAGTTGACTCTGTAGCC................................................................................ 26 1 16.00 0.00 0.00 0.00 1.00 15.00 ..............................ATTAAGTTGACTGTGTAGC................................................................................. 19 1 16.00 0.00 0.00 2.00 0.00 14.00 ..................................................................................GTCAGCAACTTGATTCCAGCACC......................... 23 1 16.00 0.00 0.00 0.00 0.00 16.00 ..................................................................................GGCAGCAACTTGATTCCAGCAA.......................... 22 1 16.00 0.00 3.00 0.00 13.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCAATT........................ 24 1 16.00 0.00 1.00 0.00 0.00 15.00 .....................................................................................AGCAACTTGATTCCAGCA........................... 18 1 16.00 0.00 6.00 0.00 10.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTGGCC................................................................................ 26 1 15.00 0.00 0.00 0.00 0.00 15.00 ........................CCCGGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 15.00 0.00 0.00 0.00 0.00 15.00 ........................CCCGGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 15.00 0.00 0.00 0.00 2.00 13.00 .........................CCTGAATTAAGTTGACTGTGTAGCC................................................................................ 25 1 14.00 0.00 0.00 0.00 0.00 14.00 ..................................................................................GCCAGCAACTTGATTCCAGCA........................... 21 1 14.00 0.00 2.00 0.00 12.00 0.00 ........................CCTGGGATTAAGTTGACTGTGTAGCC................................................................................ 26 1 14.00 0.00 1.00 0.00 4.00 9.00 ........................CCTGGAATTAAGTTGACTGTCTAGC................................................................................. 25 1 13.00 0.00 0.00 0.00 1.00 12.00 ........................CCTGGAATTAAGTTGACTGTGTAGTC................................................................................ 26 1 13.00 1.00 1.00 0.00 2.00 9.00 .......................TCCTGGAATTAAGTTGACTGTGTAGC................................................................................. 26 1 13.00 0.00 0.00 0.00 1.00 12.00 ........................CCTGGAATTAAGTTGACTGTATAGCC................................................................................ 26 1 13.00 0.00 1.00 1.00 0.00 11.00 ........................CCTGGAATTAAGCTGACTGTGTAGC................................................................................. 25 1 13.00 0.00 0.00 1.00 1.00 11.00 ........................CCTGGAATTAAGTTGACTGTGTAT.................................................................................. 24 1 13.00 0.00 2.00 0.00 5.00 6.00 ........................CCTGGAATTAAGTTGACTGTGTAGT................................................................................. 25 1 12.00 1.00 2.00 0.00 1.00 8.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4770:13275536-13275665 +	93.16	ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCTCAACAATG TTAATGGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAGTACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAATATTCCGCAACAATG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..................................................................................GTCAGCAACTTGATTCCAGCA........................... 21 1 12389.00 66.00 1027.00 0.00 11296.00 ..................................................................................GTCAGCAACTTGATTCCAGCAA.......................... 22 1 5389.00 143.00 941.00 0.00 4305.00 ........................CCTGGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 3556.00 43.00 304.00 0.00 3209.00 ........................CCTGGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 2834.00 29.00 210.00 0.00 2595.00 ........................CCTGGAATTAAGTTGACTGTG..................................................................................... 21 1 553.00 0.00 94.00 0.00 459.00 ........................CCTGGAATTAAGTTGACTGTGTAG.................................................................................. 24 1 499.00 1.00 79.00 0.00 419.00 ......GGTGATTGCGTTGCAGTT.......................................................................................................... 18 1 219.00 13.00 5.00 0.00 201.00 ..................................................................................GTCAGCAACTTGATTCCAGC............................ 20 1 213.00 3.00 22.00 0.00 188.00 .....GGGTGATTGCGTTGCAGTT.......................................................................................................... 19 1 204.00 8.00 25.00 0.00 171.00 ........................CCTGGAATTAAGTTGACTGTGT.................................................................................... 22 1 178.00 0.00 33.00 0.00 145.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCT............................................................................... 27 1 161.00 0.00 8.00 0.00 153.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAA......................... 23 1 128.00 3.00 28.00 0.00 97.00 ..................................................................................GTCAGAAACTTGATTCCAGCA........................... 21 1 110.00 0.00 0.00 0.00 110.00 ..................................................................................GTCAGCAACTTGATTCCATCA........................... 21 1 100.00 1.00 12.00 0.00 87.00 ..................................................................................GTCAGCAACTTGATTCCAGCAT.......................... 22 1 95.00 1.00 29.00 0.00 65.00 ..................................................................................GTCATCAACTTGATTCCAGCA........................... 21 1 88.00 0.00 1.00 0.00 87.00 ..................................................................................GTCAGCAACTTGATTCCAGCAC.......................... 22 1 83.00 1.00 27.00 0.00 55.00 ........................CCTGGAATTAAGTTGACTGT...................................................................................... 20 1 81.00 0.00 6.00 0.00 75.00 ..................................................................................GTCAGCAACTTTATTCCAGCA........................... 21 1 80.00 0.00 1.00 0.00 79.00 ..................................................................................GTCAGCAACTTGATTCCAG............................. 19 1 77.00 0.00 3.00 0.00 74.00 ..................................................................................GTAAGCAACTTGATTCCAGCA........................... 21 1 71.00 0.00 2.00 0.00 69.00 ..................................................................................GTCAGCAACTTGATTCAAGCA........................... 21 1 62.00 0.00 1.00 0.00 61.00 ........................CCTGGAATTAAGTTGACTGTGTA................................................................................... 23 1 60.00 0.00 25.00 0.00 35.00 ........................CATGGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 58.00 0.00 0.00 0.00 58.00 ..................................................................................GTCAGAAACTTGATTCCAGCAA.......................... 22 1 49.00 0.00 0.00 0.00 49.00 ........................CCTGGAATTAAGTTGACTGTGTCGC................................................................................. 25 1 47.00 0.00 0.00 0.00 47.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAT......................... 23 1 47.00 0.00 6.00 0.00 41.00 ..................................................................................GTCAGCAACTTGATTCCATCAA.......................... 22 1 46.00 4.00 7.00 0.00 35.00 ..................................................................................GTCAGCAACTTGATTCCAGAA........................... 21 1 45.00 0.00 2.00 0.00 43.00 ..................................................................................GTCAGCAACTTGATTACAGCA........................... 21 1 45.00 0.00 2.00 0.00 43.00 ........................CATGGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 44.00 0.00 0.00 0.00 44.00 ..................................................................................TTCAGCAACTTGATTCCAGCA........................... 21 1 41.00 0.00 1.00 0.00 40.00 ...................................................................................TCAGCAACTTGATTCCAGCA........................... 20 1 39.00 0.00 1.00 0.00 38.00 ..................................................................................GTCAGCAACTTGATTCCAGCT........................... 21 1 36.00 0.00 7.00 0.00 29.00 ........................CCTGGAATTAAGTTGACTGTGTTGC................................................................................. 25 1 35.00 0.00 0.00 0.00 35.00 .....................................................................................AGCAACTTGATTCCAGCA........................... 18 1 34.00 0.00 2.00 0.00 32.00 ........................ACTGGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 32.00 0.00 0.00 0.00 32.00 ..................................................................................GTCAGCAAATTGATTCCAGCA........................... 21 1 32.00 0.00 1.00 0.00 31.00 ........................CCTGGAATTAAGTTGACTGTGTCGCC................................................................................ 26 1 32.00 0.00 1.00 0.00 31.00 ..................................................................................GTCAGCAACTTTATTCCAGCAA.......................... 22 1 31.00 0.00 0.00 0.00 31.00 ........................CCTGGAATTAAGTTGACTGTGTATCC................................................................................ 26 1 31.00 2.00 5.00 0.00 24.00 .........................CTGGAATTAAGTTGACTGTGTAGC................................................................................. 24 1 31.00 2.00 1.00 0.00 28.00 ........................CCTGGAATTAAGTTGACTG....................................................................................... 19 1 30.00 0.00 1.00 0.00 29.00 ..................................................................................GTCATCAACTTGATTCCAGCAA.......................... 22 1 30.00 0.00 0.00 0.00 30.00 ..................................................................................GTCAGCAACTTGCTTCCAGCA........................... 21 1 30.00 0.00 8.00 0.00 22.00 ........................CCTGGAATTAAGTTGACTGTGTATC................................................................................. 25 1 29.00 2.00 9.00 0.00 18.00 ..................................................................................GTAAGCAACTTGATTCCAGCAA.......................... 22 1 28.00 1.00 0.00 0.00 27.00 ........................CCTGGAATTAAGTTTACTGTGTAGC................................................................................. 25 1 28.00 0.00 1.00 0.00 27.00 ..................................................................................GCCAGCAACTTGATTCCAGCA........................... 21 1 28.00 0.00 4.00 0.00 24.00 ........................CCTTGAATTAAGTTGACTGTGTAGC................................................................................. 25 1 27.00 0.00 0.00 0.00 27.00 ........................CCTTGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 27.00 0.00 0.00 0.00 27.00 ..................................................................................GTCAGCAACTTGATTACAGCAA.......................... 22 1 26.00 0.00 3.00 0.00 23.00 ........................ACTGGAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 26.00 0.00 0.00 0.00 26.00 ..................................................................................GTCAGCAACTTGATTCCAGCC........................... 21 1 25.00 0.00 9.00 0.00 16.00 ........................CCTGGAATTAAGTTGACTGTGTGGC................................................................................. 25 1 24.00 0.00 0.00 0.00 24.00 ........................CCTGGAATTAAGTTGACTGTGTGGCC................................................................................ 26 1 23.00 0.00 0.00 0.00 23.00 ...................................................................................TCAGCAACTTGATTCCAGCAATT........................ 23 1 23.00 1.00 0.00 0.00 22.00 ..................................................................................GTCAGCAACTTGATTCCAGAAA.......................... 22 1 21.00 0.00 0.00 0.00 21.00 ..................................................................................GTCAGCAACTTGATTCAAGCAA.......................... 22 1 21.00 1.00 3.00 0.00 17.00 ..................................................................................GTGAGCAACTTGATTCCAGCA........................... 21 1 20.00 1.00 0.00 0.00 19.00 ..................................................................................GTTAGCAACTTGATTCCAGCA........................... 21 1 20.00 0.00 0.00 0.00 20.00 .........................CTGGAATTAAGTTGACTGTGTAGCC................................................................................ 25 1 19.00 0.00 2.00 0.00 17.00 ..................................................................................ATCAGCAACTTGATTCCAGCA........................... 21 1 19.00 0.00 0.00 0.00 19.00 ..................................................................................GTCAGCAACTTGATCCCAGCA........................... 21 1 19.00 1.00 0.00 0.00 18.00 ....TGGGTGATTGCGTTGCAGTT.......................................................................................................... 20 1 19.00 0.00 2.00 0.00 17.00 ...................................................................................TCAGCAACTTGATTCCAGCAA.......................... 21 1 19.00 0.00 2.00 0.00 17.00 ........................CCTGTAATTAAGTTGACTGTGTAGC................................................................................. 25 1 18.00 0.00 0.00 0.00 18.00 ..................................................................................GTCAGCAACTTGATTCCAGCAG.......................... 22 1 18.00 1.00 1.00 0.00 16.00 ..................................................................................GTCAGCAACTCGATTCCAGCA........................... 21 1 17.00 1.00 1.00 0.00 15.00 ..................................................................................GTCAGCAACTTGATTCCCGCAA.......................... 22 1 16.00 1.00 9.00 0.00 6.00 ..................................................................................GTCGGCAACTTGATTCCAGCA........................... 21 1 16.00 0.00 1.00 0.00 15.00 .....................................................................................AGCAACTTGATTCCAGCAA.......................... 19 1 15.00 0.00 6.00 0.00 9.00 ........................CCTGGAATTAAGTTGACTGTGTAGA................................................................................. 25 1 15.00 0.00 2.00 0.00 13.00 ..................................................................................GTCAGCAACTTGCTTCCAGCAA.......................... 22 1 15.00 1.00 9.00 0.00 5.00 ..................................................................................GTCAGCAACTTGATTCTAGCA........................... 21 1 14.00 0.00 3.00 0.00 11.00 ..................................................................................GTCAGCAACTTGATTCCCGCA........................... 21 1 14.00 1.00 6.00 0.00 7.00 ..................................................................................GTCAGCAACTTGATTCCAGCCA.......................... 22 1 14.00 6.00 7.00 0.00 1.00 ........................CCTGGAATTAAGTTTACTGTGTAGCC................................................................................ 26 1 13.00 0.00 0.00 0.00 13.00 ..................................................................................GTCAGCAACTTGACTCCAGCAA.......................... 22 1 13.00 1.00 2.00 0.00 10.00 ..................................................................................GTCAGCAACTTGATTCCACCA........................... 21 1 13.00 0.00 5.00 0.00 8.00 ..................................................................................TTCAGCAACTTGATTCCAGCAA.......................... 22 1 13.00 0.00 2.00 0.00 11.00 ..................................................................................GTCAGCAACTTGATTCCAGCG........................... 21 1 13.00 0.00 1.00 0.00 12.00 ........................CCTGTAATTAAGTTGACTGTGTAGCC................................................................................ 26 1 13.00 0.00 0.00 0.00 13.00 ........................CCTGGAATTAAGTTGACTTTGTAGC................................................................................. 25 1 12.00 0.00 0.00 0.00 12.00 ........................CCTGGAATTAAGTTGACTTTGTAGCC................................................................................ 26 1 12.00 0.00 1.00 0.00 11.00 ..................................................................................GTCAGCAGCTTGATTCCAGCA........................... 21 1 12.00 0.00 0.00 0.00 12.00 ..................................................................................GTCAGCAACTTAATTCCAGCA........................... 21 1 12.00 0.00 4.00 0.00 8.00 ........................CCTGGAATTAAGTTGAATGTGTAGC................................................................................. 25 1 12.00 0.00 0.00 0.00 12.00 ........................CCTGGAATTAAGTTGAATGTGTAGCC................................................................................ 26 1 12.00 0.00 0.00 0.00 12.00 ......................TTCCTGGAATTAAGTTGACTGTG..................................................................................... 23 1 12.00 0.00 0.00 0.00 12.00 ..................................................................................GTCAGCAACTTGGTTCCAGCA........................... 21 1 12.00 0.00 2.00 0.00 10.00 ..................................................................................GTCAGCAACTTGACTCCAGCA........................... 21 1 12.00 0.00 0.00 0.00 12.00 ........................CATGGAATTAAGTTGACTGTG..................................................................................... 21 1 11.00 0.00 0.00 0.00 11.00 ....................................................................................CAGCAACTTGATTCCAGCAA.......................... 20 1 11.00 0.00 0.00 0.00 11.00 ........................CCTGGAATTAATTTGACTGTGTAGCC................................................................................ 26 1 11.00 0.00 0.00 0.00 11.00 ..................................................................................GTCAGCAAATTGATTCCAGCAA.......................... 22 1 11.00 0.00 3.00 0.00 8.00 ..................................................................................ATCAGCAACTTGATTCCAGCAA.......................... 22 1 11.00 0.00 0.00 0.00 11.00 ..................................................................................GTCAGCACCTTGATTCCAGCA........................... 21 1 11.00 0.00 3.00 0.00 8.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAAA........................ 24 1 11.00 0.00 2.00 0.00 9.00 ........................CCTGGAATTAAGTTGACTGTGTAGCA................................................................................ 26 1 11.00 0.00 1.00 0.00 10.00 ..................................................................................GTCAGCAACTTGATTCCGGCA........................... 21 1 11.00 0.00 0.00 0.00 11.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000453812:740387-740517 +	88.76	A-TAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCTCAACAATG AGTAAAAGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAGAAATTCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAATATTCCGCAACAATA Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000409615:590796-590934 -	79.5	AT---------AATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCTCAACAATG ATGATGATTACAATGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAGTATTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAATATTCCGCAACGAAG Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302402:52708-52835 -	90.0	ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCTCAACAATG ACAACAGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAGTACTGCTTCCGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAATAATCCGCAACAA-- Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415366:178200-178329 +	90.13	ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCTCAACAATG ACGATGGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAGTACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAATATTCCGCAACAATG Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000490994:49794-49921 -	89.23	ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCTCAACAATG ACGAAAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAGTACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAATATTCCGCAACAA-- Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000779135:15068-15197 +	88.62	ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGATATTCCTCAACAATG AGGAAAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAGTACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAATATTCCGCAACAAAG Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302256:694399-694526 +	86.36	ATA-ATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCC-CGATATTCCTCAACAATG ATATAGAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAGTACTGCTTCCGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCGCAATAATCCGCATC---- Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_12911:3307955-3308116 -	56.58	ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCC--------------------------------GATATTCCTCAACAATG ACAAAAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAGAACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAGTACAGCAGAAAGAGCCGTGAACCGTGTTCAATATGCCACGACAATG Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ..................................................................................GTCAGCAACTTGATTCCAGCA........................................................... 21 1 10156.00 145.00 9172.00 823.00 16.00 ..................................................................................GTCAGCAACTTGATTCCAGCAA.......................................................... 22 1 2720.00 165.00 1940.00 589.00 26.00 ........................CCTGGAATTAAGTTGACTGTGTAGC................................................................................................................. 25 1 2083.00 570.00 1114.00 395.00 4.00 ........................CCTGGAATTAAGTTGACTGTGTAGCC................................................................................................................ 26 1 1988.00 334.00 1150.00 504.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTAG.................................................................................................................. 24 1 315.00 100.00 96.00 119.00 0.00 ........................CCTGGAATTAAGTTGACTGTGT.................................................................................................................... 22 1 280.00 65.00 80.00 135.00 0.00 ........................CCTGGAATTAAGTTGACTGTG..................................................................................................................... 21 1 227.00 28.00 89.00 109.00 1.00 ..................................................................................GTCAGCAACTTGATTCCAGC............................................................ 20 1 207.00 2.00 190.00 15.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCT............................................................................................................... 27 1 131.00 13.00 89.00 29.00 0.00 ..................................................................................GTCAGCAACTTGATTCCATCA........................................................... 21 1 122.00 0.00 118.00 4.00 0.00 .....AGGCAATTGCGTTGCAGTT.......................................................................................................................................... 19 1 120.00 4.00 76.00 40.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCT........................................................... 21 1 95.00 5.00 60.00 30.00 0.00 ..................................................................................GTCAGAAACTTGATTCCAGCA........................................................... 21 1 88.00 0.00 79.00 9.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCAT.......................................................... 22 1 83.00 17.00 45.00 19.00 2.00 ..................................................................................GTCAGCAACTTGATTCCAG............................................................. 19 1 81.00 0.00 78.00 3.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAA......................................................... 23 1 80.00 7.00 49.00 21.00 3.00 ........................CCTGGAATTAAGTTGACTGTGTA................................................................................................................... 23 1 72.00 27.00 24.00 21.00 0.00 ...................................................................................TCAGCAACTTGATTCCAGCA........................................................... 20 1 64.00 1.00 62.00 1.00 0.00 ..................................................................................GTCATCAACTTGATTCCAGCA........................................................... 21 1 54.00 0.00 53.00 0.00 1.00 ..................................................................................GTCAGCAACTTGATTCCAGAA........................................................... 21 1 46.00 0.00 44.00 2.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAT......................................................... 23 1 46.00 1.00 43.00 2.00 0.00 ..................................................................................GTCAGCAACTTTATTCCAGCA........................................................... 21 1 41.00 1.00 38.00 2.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTATC................................................................................................................. 25 1 40.00 7.00 22.00 11.00 0.00 ..................................................................................GTCAGCAACTTGATTACAGCA........................................................... 21 1 39.00 1.00 35.00 3.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCAC.......................................................... 22 1 30.00 1.00 16.00 13.00 0.00 ........................CCTGGAATTAAGTTGACTGT...................................................................................................................... 20 1 30.00 8.00 4.00 18.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCAG.......................................................... 22 1 29.00 0.00 22.00 7.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCG........................................................... 21 1 29.00 2.00 27.00 0.00 0.00 ..................................................................................GGCAGCAACTTGATTCCAGCA........................................................... 21 1 29.00 1.00 6.00 22.00 0.00 ..................................................................................GTGAGCAACTTGATTCCAGCA........................................................... 21 1 26.00 0.00 23.00 3.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTATCC................................................................................................................ 26 1 26.00 2.00 15.00 9.00 0.00 ..................................................................................GTCAGCAACTTGATTCAAGCA........................................................... 21 1 24.00 0.00 24.00 0.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCC........................................................... 21 1 23.00 1.00 16.00 5.00 1.00 ..................................................................................GTAAGCAACTTGATTCCAGCA........................................................... 21 1 22.00 1.00 19.00 2.00 0.00 ..................................................................................GCCAGCAACTTGATTCCAGCA........................................................... 21 1 21.00 1.00 13.00 7.00 0.00 ..................................................................................GACAGCAACTTGATTCCAGCA........................................................... 21 1 21.00 0.00 11.00 10.00 0.00 ..................................................................................GTCAGCAACTTGATTCCGGCA........................................................... 21 1 18.00 0.00 17.00 1.00 0.00 ........................ACTGGAATTAAGTTGACTGTGTAGC................................................................................................................. 25 1 17.00 3.00 10.00 4.00 0.00 ..................................................................................TTCAGCAACTTGATTCCAGCA........................................................... 21 1 17.00 0.00 16.00 1.00 0.00 ..................................................................................GTCAGAAACTTGATTCCAGCAA.......................................................... 22 1 17.00 1.00 13.00 3.00 0.00 .....................................................................................AGCAACTTGATTCCAGCA........................................................... 18 1 17.00 1.00 7.00 8.00 1.00 ..................................................................................GTCAGCAACTCGATTCCAGCA........................................................... 21 1 16.00 1.00 11.00 4.00 0.00 ........................CCTGGAATTAAGTTGACTGTATAGC................................................................................................................. 25 1 15.00 4.00 11.00 0.00 0.00 ..................................................................................GTCAGCAACTTGATTCCATCAA.......................................................... 22 1 15.00 0.00 12.00 3.00 0.00 ........................ACTGGAATTAAGTTGACTGTGTAGCC................................................................................................................ 26 1 15.00 1.00 6.00 8.00 0.00 ...................................................................................TCAGCAACTTGATTCCAGCAA.......................................................... 21 1 15.00 0.00 13.00 2.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCTT.......................................................... 22 1 15.00 1.00 11.00 3.00 0.00 ........................CCTGGAATTAAGTTGACTGTCTAGC................................................................................................................. 25 1 14.00 9.00 5.00 0.00 0.00 ..................................................................................GTCAGCAGCTTGATTCCAGCA........................................................... 21 1 14.00 0.00 11.00 3.00 0.00 ........................CATGGAATTAAGTTGACTGTGTAGC................................................................................................................. 25 1 14.00 3.00 9.00 2.00 0.00 ........................CCTGGAATTAAGTTGACTG....................................................................................................................... 19 1 14.00 4.00 6.00 4.00 0.00 ..................................................................................GTTAGCAACTTGATTCCAGCA........................................................... 21 1 13.00 0.00 13.00 0.00 0.00 ..................................................................................GTCAGCAACTTGATCCCAGCA........................................................... 21 1 12.00 0.00 7.00 5.00 0.00 ..................................................................................GGCAGCAACTTGATTCCAGCAA.......................................................... 22 1 12.00 0.00 1.00 10.00 1.00 ........................CCTGGAATTAAGTTTACTGTGTAGCC................................................................................................................ 26 1 11.00 0.00 10.00 1.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGT............................................................ 20 1 11.00 1.00 10.00 0.00 0.00 ..................................................................................GTCATCAACTTGATTCCAGCAA.......................................................... 22 1 11.00 0.00 10.00 1.00 0.00 ..................................................................................GTAAGCAACTTGATTCCAGCAA.......................................................... 22 1 11.00 2.00 4.00 5.00 0.00 ..................................................................................GTCAGCAACTTGGTTCCAGCA........................................................... 21 1 11.00 1.00 8.00 2.00 0.00 ........................CATGGAATTAAGTTGACTGTGTAGCC................................................................................................................ 26 1 11.00 0.00 6.00 5.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCAATT........................................................ 24 1 11.00 1.00 9.00 1.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCTA.......................................................... 22 1 11.00 3.00 6.00 1.00 1.00 ..................................................................................GTCAGCAACTTGCTTCCAGCAA.......................................................... 22 1 10.00 2.00 2.00 6.00 0.00 ..................................................................................GTCAGCAACTTGATTTCAGCA........................................................... 21 1 10.00 1.00 8.00 1.00 0.00 ..................................................................................GTCGGCAACTTGATTCCAGCA........................................................... 21 1 10.00 0.00 10.00 0.00 0.00 ..................................................................................GCCAGCAACTTGATTCCAGCAA.......................................................... 22 1 10.00 0.00 6.00 4.00 0.00 ..................................................................................GTCAGAAACTTGATTCCAGAA........................................................... 21 1 9.00 0.00 9.00 0.00 0.00 ..................................................................................GTCAGTAACTTGATTCCAGCA........................................................... 21 1 9.00 0.00 6.00 3.00 0.00 ........................CCTGGAATTAAGTTGACTGTGCAGC................................................................................................................. 25 1 9.00 1.00 3.00 5.00 0.00 ..................................................................................GTCAGCAACCTGATTCCAGCA........................................................... 21 1 9.00 0.00 9.00 0.00 0.00 ..................................................................................GTCAGCAAATTGATTCCAGCAA.......................................................... 22 1 9.00 0.00 1.00 8.00 0.00 ..................................................................................GTCAGCAACTTGATTCTAGCA........................................................... 21 1 9.00 0.00 6.00 3.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGAAA.......................................................... 22 1 9.00 0.00 8.00 1.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTAGCT................................................................................................................ 26 1 9.00 3.00 2.00 4.00 0.00 ........................CCGGGAATTAAGTTGACTGTGTAGCC................................................................................................................ 26 1 9.00 0.00 8.00 1.00 0.00 ..................................................................................GTCAGCAACTTGCTTCCAGCA........................................................... 21 1 9.00 0.00 3.00 6.00 0.00 ........................CCTGTAATTAAGTTGACTGTGTAGC................................................................................................................. 25 1 8.00 1.00 7.00 0.00 0.00 ........................CCGGGAATTAAGTTGACTGTGTAGC................................................................................................................. 25 1 8.00 0.00 6.00 2.00 0.00 ........................CCTGGAATTAAGTTGACTGTGCAGCC................................................................................................................ 26 1 8.00 1.00 4.00 3.00 0.00 ....AAGGCAATTGCGTTGCAGTT.......................................................................................................................................... 20 1 8.00 1.00 4.00 3.00 0.00 ..................................................................................GTGAGCAACTTGATTCCAGCAA.......................................................... 22 1 8.00 0.00 8.00 0.00 0.00 ..................................................................................ATCAGCAACTTGATTCCAGCA........................................................... 21 1 8.00 0.00 7.00 1.00 0.00 ........................CCTGGAATTAAGTTGACTGTATAGCC................................................................................................................ 26 1 8.00 3.00 5.00 0.00 0.00 ..................................................................................GTCACCAACTTGATTCCAGCAA.......................................................... 22 1 8.00 1.00 5.00 2.00 0.00 ........................CCTGGAATTAAGTTGACTGTCTAGCC................................................................................................................ 26 1 8.00 1.00 5.00 1.00 1.00 ..................................................................................GTCAGCAACTTGATTCCAGCCA.......................................................... 22 1 8.00 2.00 4.00 1.00 1.00 ........................CCTGGAATTAAGTTTACTGTGTAGC................................................................................................................. 25 1 8.00 2.00 6.00 0.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTT................................................................................................................... 23 1 8.00 3.00 4.00 1.00 0.00 ........................CCTGGGATTAAGTTGACTGTGTAGCC................................................................................................................ 26 1 8.00 0.00 1.00 7.00 0.00 ..................................................................................GTCAGCAACTTGATTCCGGCAA.......................................................... 22 1 8.00 0.00 4.00 4.00 0.00 ........................CCTTGAATTAAGTTGACTGTGTAGC................................................................................................................. 25 1 7.00 2.00 5.00 0.00 0.00 ..................................................................................GTCAGCAAATTGATTCCAGCA........................................................... 21 1 7.00 0.00 1.00 6.00 0.00 ..................................................................................GTCAGCAACTTGATTCCACCA........................................................... 21 1 7.00 0.00 1.00 6.00 0.00 ..................................................................................GACAGCAACTTGATTCCAGCAA.......................................................... 22 1 7.00 0.00 2.00 5.00 0.00 ..................................................................................GTCAGCGACTTGATTCCAGCA........................................................... 21 1 7.00 0.00 7.00 0.00 0.00 ..................................................................................GTCAGCAACTTAATTCCAGCA........................................................... 21 1 7.00 1.00 5.00 1.00 0.00 ....................................................................................CAGCAACTTGATTCCAGCA........................................................... 19 1 7.00 0.00 7.00 0.00 0.00 ..................................................................................GTCAGCAACTCGATTCCAGCAA.......................................................... 22 1 7.00 0.00 7.00 0.00 0.00 ..................................................................................GTCATCAACTTGATTCCATCA........................................................... 21 1 7.00 1.00 6.00 0.00 0.00 ........................CCTGGAATTAATTTGACTGTGTAGC................................................................................................................. 25 1 7.00 3.00 1.00 2.00 1.00 ..................................................................................GTCACCAACTTGATTCCAGCA........................................................... 21 1 7.00 0.00 7.00 0.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396640:173076-173237 -	56.58	ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCC--------------------------------GATATTCCTCAACAATG ACAAAAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAGAACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAGTACAGCAGAAAGAGCCGTGAACCGTGTTCAATATGCCACGACAATG Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chr2:2484958-2485100 -	69.48	ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGCAAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGA-------------TATTCCTCAACAATG ATCAGAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGGGAAGGCAAGGCTTGAGCACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAGCACAACGCTGAATGGTGCTCAAAATAC Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ........................CCTGGAATTAAGTTGACTGTGTAGCC............................................................................................. 26 1 2041.00 493.00 127.00 867.00 554.00 ..................................................................................GTCAGCAACTTGATTCCAGCAA....................................... 22 1 1653.00 181.00 244.00 1166.00 62.00 ........................CCTGGAATTAAGTTGACTGTGTAGC.............................................................................................. 25 1 1317.00 502.00 67.00 423.00 325.00 ..................................................................................GTCAGCAACTTGATTCCAGCA........................................ 21 1 1118.00 116.00 53.00 928.00 21.00 ........................CCTGGAATTAAGTTGACTGTGTAG............................................................................................... 24 1 356.00 113.00 3.00 201.00 39.00 .....AGGCAATTGCGTTGCAGTT....................................................................................................................... 19 1 164.00 7.00 6.00 151.00 0.00 ........................CCTGGAATTAAGTTGACTGTGT................................................................................................. 22 1 134.00 29.00 1.00 92.00 12.00 ........................CCTGGAATTAAGTTGACTGTG.................................................................................................. 21 1 81.00 22.00 0.00 59.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTA................................................................................................ 23 1 65.00 9.00 1.00 49.00 6.00 ........................CCTGGAATTAAGTTGACTGTGTAGCCT............................................................................................ 27 1 48.00 16.00 0.00 21.00 11.00 ..................................................................................GTCAGCAACTTGATTCCAGC......................................... 20 1 42.00 5.00 0.00 31.00 6.00 ..................................................................................GTCAGCAACTTGATTCCAGCAC....................................... 22 1 37.00 2.00 2.00 21.00 12.00 ..................................................................................GTCAGCAACTTGATTCCAGCAAA...................................... 23 1 28.00 4.00 3.00 20.00 1.00 ..................................................................................GTCAGCAACTTGATTCCAGCAT....................................... 22 1 24.00 3.00 0.00 21.00 0.00 ........................CCTGGAATTAAGTTGACTGT................................................................................................... 20 1 15.00 4.00 0.00 8.00 3.00 ..................................................................................GTCAGCAACTTGATTCCAGCC........................................ 21 1 13.00 0.00 2.00 11.00 0.00 ..................................................................................GGCAGCAACTTGATTCCAGCAA....................................... 22 1 13.00 0.00 0.00 13.00 0.00 ........................CCTGGAATTAAGTTGACTG.................................................................................................... 19 1 12.00 4.00 0.00 3.00 5.00 ..................................................................................GTCAGCAACTTGATTCCAGCT........................................ 21 1 11.00 0.00 2.00 9.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCCA....................................... 22 1 11.00 1.00 5.00 5.00 0.00 ..................................................................................GTCAGCAACTTGATTCCCGCA........................................ 21 1 9.00 0.00 1.00 8.00 0.00 ........................CCTGGAATTAAGTTGACTGTGCAGCC............................................................................................. 26 1 9.00 0.00 1.00 7.00 1.00 ..................................................................................GACAGCAACTTGATTCCAGCAA....................................... 22 1 9.00 1.00 4.00 4.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTCGCC............................................................................................. 26 1 8.00 1.00 0.00 1.00 6.00 ..................................................................................GTCAGCAACTTGATTCAAGCAA....................................... 22 1 8.00 0.00 0.00 8.00 0.00 .....................................................................................AGCAACTTGATTCCAGCAA....................................... 19 1 8.00 0.00 3.00 5.00 0.00 .....................................................................................AGCAACTTGATTCCAGCA........................................ 18 1 8.00 1.00 1.00 6.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTAGAC............................................................................................. 26 1 7.00 1.00 1.00 2.00 3.00 .........................CTGGAATTAAGTTGACTGTGTAGCC............................................................................................. 25 1 7.00 5.00 0.00 1.00 1.00 ........................CCTGGAATTAAGCTGACTGTGTAGCC............................................................................................. 26 1 7.00 1.00 1.00 5.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTATCC............................................................................................. 26 1 7.00 0.00 2.00 5.00 0.00 ..................................................................................GGCAGCAACTTGATTCCAGCA........................................ 21 1 7.00 0.00 0.00 7.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTAGT.............................................................................................. 25 1 6.00 2.00 2.00 2.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTAGA.............................................................................................. 25 1 6.00 0.00 0.00 4.00 2.00 ..................................................................................GTCAGCAACTTGCTTCCAGCAA....................................... 22 1 6.00 0.00 0.00 6.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTAGCT............................................................................................. 26 1 6.00 0.00 0.00 1.00 5.00 ..................................................................................GTAAGCAACTTGATTCCAGCAA....................................... 22 1 5.00 0.00 1.00 4.00 0.00 ........................CCTGGAATTAAGGTGACTGTGTAGCC............................................................................................. 26 1 5.00 0.00 1.00 3.00 1.00 ........................CCTGGAATTAAGTTGACTGCGTAGCC............................................................................................. 26 1 5.00 0.00 0.00 5.00 0.00 ..................................................................................GCCAGCAACTTGATTCCAGCA........................................ 21 1 5.00 0.00 0.00 5.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAG.......................................... 19 1 5.00 0.00 0.00 4.00 1.00 ..................................................................................GTCAGCAACTTGATTCCAGCTT....................................... 22 1 5.00 0.00 1.00 4.00 0.00 .........................CTGGAATTAAGTTGACTGTGTAGC.............................................................................................. 24 1 5.00 2.00 1.00 2.00 0.00 ........................CCCGGAATTAAGTTGACTGTGTAGCC............................................................................................. 26 1 5.00 1.00 0.00 4.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCTA....................................... 22 1 5.00 0.00 2.00 3.00 0.00 ........................CCTGGAATTAAGATGACTGTGTAGCC............................................................................................. 26 1 5.00 1.00 0.00 2.00 2.00 ..................................................................................GTAAGCAACTTGATTCCAGCA........................................ 21 1 4.00 0.00 1.00 3.00 0.00 ..................................................................................GTCAGCAACTTGATTCCCGCAA....................................... 22 1 4.00 0.00 0.00 4.00 0.00 ..................................................................................GTCAGCAACTTGATTCTAGCAA....................................... 22 1 4.00 0.00 1.00 3.00 0.00 ........................TCTGGAATTAAGTTGACTGTGTAGCC............................................................................................. 26 1 4.00 0.00 0.00 4.00 0.00 ...................................................................................TCAGCAACTTGATTCCAGCAA....................................... 21 1 4.00 2.00 1.00 1.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTAGCA............................................................................................. 26 1 4.00 0.00 2.00 2.00 0.00 ..................................................................................GACAGCAACTTGATTCCAGCA........................................ 21 1 4.00 0.00 0.00 4.00 0.00 ........................CCTGGAATTAAGTTGATTGTGTAGCC............................................................................................. 26 1 3.00 3.00 0.00 0.00 0.00 ..................................................................................GTCAGCAACTTGATTCCACCAA....................................... 22 1 3.00 0.00 0.00 3.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTCGC.............................................................................................. 25 1 3.00 0.00 0.00 0.00 3.00 ..................................................................................GTCAGCAACCTGATTCCAGCAA....................................... 22 1 3.00 0.00 0.00 3.00 0.00 ........................CCTGGAATTAAGATGACTGTGTATCC............................................................................................. 26 1 3.00 0.00 2.00 1.00 0.00 ........................CCTGGAATTAAGTTGCCTGTGTAGC.............................................................................................. 25 1 3.00 2.00 0.00 1.00 0.00 ........................ACTGGAATTAAGTTGACTGTGTAGCC............................................................................................. 26 1 3.00 0.00 0.00 3.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTATC.............................................................................................. 25 1 3.00 0.00 0.00 3.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTACCC............................................................................................. 26 1 3.00 0.00 0.00 3.00 0.00 ........................TCTGGAATTAAGTTGACTGTGTAGC.............................................................................................. 25 1 3.00 0.00 0.00 3.00 0.00 ........................CCTGGAATTACGTTGACTGTGTAGCC............................................................................................. 26 1 3.00 0.00 0.00 3.00 0.00 ..................................................................................GTCAGCAACTTGATTCAAGCA........................................ 21 1 3.00 0.00 0.00 3.00 0.00 ..................................................................................GTCAGCAGCTTGATTCCAGCA........................................ 21 1 3.00 0.00 0.00 3.00 0.00 ........................CCTGGAATTAAGTTGACTGTGCAGC.............................................................................................. 25 1 3.00 0.00 0.00 2.00 1.00 ........................CCTGGAATTAAGTTGACCGTGTAGCC............................................................................................. 26 1 3.00 3.00 0.00 0.00 0.00 ........................CCTGGAATTAAGGTGACTGTGTAGC.............................................................................................. 25 1 3.00 1.00 1.00 1.00 0.00 ........................CCTGGAATTAAGTTGACTGTGTAGTC............................................................................................. 26 1 3.00 0.00 0.00 3.00 0.00 ..................................................................................GTCAGCAACTTGATTACAGCA........................................ 21 1 3.00 0.00 0.00 3.00 0.00 ..................................................................................GTGAGCAACTTGATTCCAGCAA....................................... 22 1 3.00 0.00 0.00 3.00 0.00 ..................................................................................GTCAGCAAATTGATTCCAGCAA....................................... 22 1 3.00 0.00 1.00 2.00 0.00 ..................................................................................GTCAGCAACTTGATTCCATCAA....................................... 22 1 3.00 0.00 0.00 3.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGT......................................... 20 1 3.00 2.00 0.00 1.00 0.00 ..................................................................................GTCAGCACCTTGATTCCAGCA........................................ 21 1 3.00 0.00 1.00 2.00 0.00 ........................CCTGGGATTAAGTTGACTGTGTAGCC............................................................................................. 26 1 3.00 2.00 1.00 0.00 0.00 ........................CCTGGAATTAAGTTGACTGCGTAGC.............................................................................................. 25 1 3.00 0.00 0.00 3.00 0.00 ..................................................................................GTCAGCAACTTGATTCCAGCG........................................ 21 1 3.00 0.00 1.00 2.00 0.00 ..................................................................................GCCAGCAACTTGATTCCAGCAA....................................... 22 1 3.00 0.00 1.00 2.00 0.00 ..................................................................................GTCAGCGACTTGATTCCAGCA........................................ 21 1 3.00 0.00 2.00 1.00 0.00 ..................................................................................GTCAGAAACTTGATTCCAGCAA....................................... 22 1 3.00 0.00 0.00 3.00 0.00 ..................................................................................GTCAGCAACTTGATTCCGGCAA....................................... 22 1 3.00 0.00 3.00 0.00 0.00 ..................................................................................GTCAGCAACTTGACTCCAGCA........................................ 21 1 3.00 1.00 0.00 2.00 0.00 ........................CCTGGAATTAAGTCGACTGTGTAGCC............................................................................................. 26 1 3.00 1.00 0.00 2.00 0.00 .........................CTGGAATTAAGTTGACTGTGTAG............................................................................................... 23 1 3.00 1.00 0.00 2.00 0.00

droPer1 - 1 hit found