dme-mir-276a- 12- and 20-way alignments

dme-mir-276a	chr3L:10358328-10358425 +	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intron

Legend:

   mature strand at position 10358381-10358402
   star strand at position 10358344-10358365
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chr3L:10358313-10358440 +	CCAAGATAT-------TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAA---TGC-----------------------------AAA----------------------------------AATCC-
droSim1	chr3L:9747980-9748107 +	CCAAGATAT-------TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAA---TGC-----------------------------AAA----------------------------------AATCC-
droSec1	super_0:2571151-2571278 +	CCAAGATAT-------TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAA---TGC-----------------------------AAA----------------------------------AATCC-
droYak2	chr3L:10348871-10348998 +	GCAAGATAT-------TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAA---TGC-----------------------------AAA----------------------------------AATCC-
droEre2	scaffold_4784:10353122-10353248 +	GCAAGATAT-------T-TTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAA---TGC-----------------------------AAA----------------------------------AATCC-
droAna3	scaffold_13337:15274238-15274392 +	CCAAGATAT-------TTCTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTAACATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCTAAAATCAACGAAA-------ACATAAAGCGGAGTTGGTTTCCCCTTCAACCAAAA----------------------------------AATCA-
dp4	chrXR_group6:8756386-8756507 +	AGAAGATGTGTGTATTTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAGACAACGAAA----------------------------------------------------------------------------------
droPer1	super_27:1191198-1191319 +	AGAAGATGTGTGTATTTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAGACAACGAAA----------------------------------------------------------------------------------
droWil1	scaffold_181024:222599-222731 -	AAA--ATAT---------GCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTTAATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACGTTACGAAA--ACAGCAA-----------------------CAAGA-------AAA------------------------AA----
droVir3	scaffold_13049:16143973-16144101 +	TGAAAATAT---------GCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCAATTTATATACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACGAAGTGAAA--CGC-----------------------------GCA----------------------------------GCACA-
droMoj3	scaffold_6680:20621783-20621940 -	CCAAAGTAT---------GCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCAATTTAAATACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAACACAACTCAA-------ACAAAAA-----------------------C-GAAAACGAGCGCAAAGCAAAGCGCAGTGCGAG-----GCAGC-
droGri2	scaffold_15110:12521893-12522042 -	CAAAAATAT---------GCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTAAATTTAAATACTCATAGGAACTTCATACCGTGCTCTTGGAAGACCAAAACACAACAAAGAAACCCAACCTTAAGCGG---------------------------------------------AATGCGATCAACAAATACG

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chr3L:10358313-10358440 +	NA	CCAA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------CAAGTGA-------------ATGCAAAAAT---CC
droSim1	chr3L:9747980-9748107 +	3	CCAA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------CAAGTGA-------------ATGCAAAAAT---CC
droSec1	super_0:2571151-2571278 +	3	CCAA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------CAAGTGA-------------ATGCAAAAAT---CC
droYak2	chr3L:10348871-10348998 +	4	GCAA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------CAAGTGA-------------ATGCAAAAAT---CC
droEre2	scaffold_4784:10353122-10353248 +	3	GCAA----------GATA-------TT-TTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------CAAGTGA-------------ATGCAAAAAT---CC
droEug1	scf7180000409711:2221453-2221580 +	3	GCAA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------AAACTAA-------------ATGCAAAAAT---CC
droBia1	scf7180000302428:7389635-7389762 -	1	CCGA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------AAAGTAA-------------ATGCAAAAAT---CC
droTak1	scf7180000415515:147698-147825 -	7	CCAA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------AAAGTAA-------------ATGCAAAAAT---CC
droEle1	scf7180000490564:1195760-1195887 +	4	CCAA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------GAAGTAA-------------ATGCAAAAAT---CT
droRho1	scf7180000778277:12893-13020 +	1	CCAA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------GAAGTAA-------------ATGCAAAAAT---CC
droFic1	scf7180000453841:693857-693984 -	4	CCAA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------AAAGTAA-------------ATGCTAAAAT---CC
droKik1	scf7180000302334:36986-37129 -	1	CCGA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCACATTATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------AAAGAAAATTTAAGAAAATAATGCAAAGTT--CCC
droAna3	scaffold_13337:15233391-15233502 +	2	---------------------------------------TTTGCCATCAGCGAGGTATAGAGTTCCTACGTGCCAC--TTAAACTAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCATCAT---G----------AAAGTGT-------------ATCCTTAAGT---TT
droBip1	scf7180000395933:129274-129383 +	3	CCAA----------GATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTAACATTATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCTAAAATCAA----------------------------------------------------
dp4	chrXR_group6:8756376-8756505 +	4	CGAACGGAGGAGAAGATGTGTGTATTTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATATTATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAGACAAC----------------GA---------------------------------
droPer1	super_27:1191188-1191317 +	3	CGAACGGAGGAGAAGATGTGTGTATTTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATATTATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAGACAAC----------------GA---------------------------------
droWil1	scaffold_181024:222598-222734 -	4	CTGA---------AA--A-------TATGCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTTAATAAA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACGTTACGAAAACAGCAACAAGA---------------------AAAA---AC
droVir3	scaffold_13049:16143973-16144087 +	4	TGAA----------AATA-------T--GCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCAATTTATATA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------GAAGTG-----------------------------
droMoj3	scaffold_6680:20621809-20621940 -	5	CCAA----------AGTA-------T--GCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCAATTTAAATA---CTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAACACAACT---------------CAAACAA-------------AAACGAAAACGAGCG
droGri2	scaffold_15110:12521926-12522042 -	5	CAAA----------AATA-------T--GCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTAAATTTAAATA---CTCATAGGAACTTCATACCGTGCTCTTGGAAGACCAAAACACAAC----------------AAAGAAA---------------------------C

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

CCAAGATAT-------TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAA---TGC-----------------------------AAA----------------------------------AATCC-

Size

Hit Count

Total Norm

droSim1

CCAAGATAT-------TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAA---TGC-----------------------------AAA----------------------------------AATCC-	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
.............................................................................TAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	320634.25	4874.00	268040.25	32709.50	15010.50
.............................................................................TAGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	110677.25	50.75	108219.25	1132.00	1275.25
.............................................................................TAGGAACTTCATACCGTGCTCC.........................................................................................................	22	4	46652.25	4.25	41216.00	3538.00	1894.00
.............................................................................TAGGAACTTCATACCGTGCTC..........................................................................................................	21	4	42755.50	25.50	36933.50	5426.75	369.75
.............................................................................TAGGAACTTAATACCGTGCTCC.........................................................................................................	22	4	16589.00	0.00	16298.00	121.00	170.00
.............................................................................TAGGAACTTCATACCGTGCT...........................................................................................................	20	4	13101.25	5.00	11457.75	1601.75	36.75
.............................................................................TAGGAACTTAATACCGTGCTC..........................................................................................................	21	4	11344.50	0.75	11196.00	103.50	44.25
.............................................................................TAGGAACTTCATACCGTGCTCG.........................................................................................................	22	4	8419.00	2.25	6595.75	1259.00	562.00
......................................AGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	5805.25	5579.25	180.25	34.50	11.25
.............................................................................TAGGAACTTAATACCGTGCT...........................................................................................................	20	4	3471.00	0.25	3436.00	27.75	7.00
.............................................................................TAGGAACTTAATACCGTGCTCG.........................................................................................................	22	4	2631.25	0.00	2544.25	40.50	46.50
.............................................................................TAGGAACTTCATACCGTGCC...........................................................................................................	20	4	1823.50	0.00	1660.25	158.25	5.00
.............................................................................TAGGAACTTCATACCGTGCTCTT........................................................................................................	23	4	1741.25	7.25	1385.75	333.00	15.25
.............................................................................TAGGAACTTCATACCTTGCTCT.........................................................................................................	22	4	770.25	3.25	656.50	61.25	49.25
.............................................................................TAGGAACTTCATACCGTGC............................................................................................................	19	4	615.50	0.25	524.00	74.75	16.50
.............................................................................TAGGAACTTAATACCTTGCTCT.........................................................................................................	22	4	548.00	0.25	537.00	2.25	8.50
.............................................................................TAGGAACTTAATACCGTGCTCTT........................................................................................................	23	4	531.25	0.00	523.50	5.75	2.00
.............................................................................TAGGAACTTCATACCGTGCG...........................................................................................................	20	4	493.25	0.00	398.75	91.25	3.25
.............................................................................TAGGAACTTCATACCGGGCTCT.........................................................................................................	22	4	468.75	7.25	411.75	35.00	14.75
.............................................................................TAGGAACTTAATACCGTGCC...........................................................................................................	20	4	464.25	0.00	463.25	1.00	0.00
.............................................................................TAGGAACTTCATACCGTGCTT..........................................................................................................	21	4	387.75	0.00	297.50	89.75	0.50
.............................................................................TATGAACTTCATACCGTGCTCT.........................................................................................................	22	4	386.75	1.25	322.50	34.75	28.25
.............................................................................TAGGGACTTCATACCGTGCTCT.........................................................................................................	22	4	370.75	13.75	309.75	34.25	13.00
.............................................................................TAGGAACTTCATACCxTGCTCT.........................................................................................................	21	4	333.00	0.25	285.25	20.50	27.00
.............................................................................TAGGAACTTCATACCGTGCCCT.........................................................................................................	22	4	325.00	5.50	267.50	36.00	16.00
.............................................................................TGGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	284.00	4.50	234.75	31.50	13.25
.............................................................................TAGGAACTTCATACCGCGCTCT.........................................................................................................	22	4	251.25	17.00	201.00	25.25	8.00
.............................................................................TAGGAACTTCATACCGTGCTCTA........................................................................................................	23	4	246.75	0.75	201.25	43.25	1.50
.............................................................................TAGGAACTTAATACCxTGCTCT.........................................................................................................	21	4	240.00	0.00	237.75	0.50	1.75
.............................................................................TAGGAACTTCATACTGTGCTCT.........................................................................................................	22	4	220.25	6.75	184.75	19.75	9.00
.............................................................................TAGGAACTTCATGCCGTGCTCT.........................................................................................................	22	4	212.75	5.75	172.50	24.25	10.25
.............................................................................TACGAACTTCATACCGTGCTCT.........................................................................................................	22	4	206.50	0.25	167.00	12.50	26.75
.............................................................................TAGGAACTTAATACCGGGCTCT.........................................................................................................	22	4	191.50	0.00	189.75	1.00	0.75
......................................AGCGAGGTATAGAGTTCCT...................................................................................................................................................	19	4	182.25	3.00	152.25	26.50	0.50
.............................................................................TAGGAACTTTATACCGTGCTCT.........................................................................................................	22	4	177.00	9.25	155.00	9.75	3.00
.............................................................................TAGGAACTTCATACCATGCTCT.........................................................................................................	22	4	177.00	4.00	141.75	21.25	10.00
..............................................................................AGGAACTTCATACCGTGCTCT.........................................................................................................	21	4	160.50	1.75	136.25	16.75	5.75
.............................................................................TAGGAGCTTCATACCGTGCTCT.........................................................................................................	22	4	160.00	7.75	127.00	18.25	7.00
...............................................................................TGAACTTCATACCGTGCTCT.........................................................................................................	20	4	157.00	0.00	132.75	10.00	14.25
.............................................................................TAGGGACTTAATACCGTGCTCT.........................................................................................................	22	4	152.00	0.75	149.25	0.00	2.00
.............................................................................TAGGAACCTCATACCGTGCTCT.........................................................................................................	22	4	151.25	6.50	116.00	19.25	9.50
.............................................................................TAGGAACTTCATACAGTGCTCT.........................................................................................................	22	4	149.00	12.25	119.75	14.00	3.00
.............................................................................TAGGAACTTCATACCGAGCTCT.........................................................................................................	22	4	147.75	8.00	122.00	13.25	4.50
.............................................................................TATGAACTTAATACCGTGCTCT.........................................................................................................	22	4	143.25	0.00	140.50	0.50	2.25
.............................................................................TAGGAACTTCATACCGTGG............................................................................................................	19	4	136.25	0.00	113.75	22.00	0.50
.............................................................................TAGGAACTTCATACCGTGCTCTC........................................................................................................	23	4	135.75	1.25	113.75	18.00	2.75
.............................................................................TAGGAACTTAATACCGTGC............................................................................................................	19	4	134.75	0.00	133.25	0.75	0.75
.............................................................................TAGGAACTTCACACCGTGCTCT.........................................................................................................	22	4	131.50	3.50	110.00	12.75	5.25
.............................................................................TAGGCACTTCATACCGTGCTCT.........................................................................................................	22	4	128.75	12.25	102.25	10.50	3.75
.............................................................................TAGGAACTTCGTACCGTGCTCT.........................................................................................................	22	4	128.50	5.50	104.00	12.25	6.75
.............................................................................TAGGAACTTCATACCCTGCTCT.........................................................................................................	22	4	123.75	3.25	103.50	11.00	6.00
.............................................................................TAGGAACTTAATACCGTGCG...........................................................................................................	20	4	119.75	0.00	118.50	0.75	0.50
.............................................................................TAGGAACTTCATACCTTGCTC..........................................................................................................	21	4	117.25	0.00	103.75	11.75	1.75
.............................................................................CAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	115.50	4.00	87.00	11.25	13.25
.............................................................................TAGGAACTTCATACCGTTCTCT.........................................................................................................	22	4	113.50	4.00	93.50	10.00	6.00
.............................................................................TAGGAACTTCATACCGTACTCT.........................................................................................................	22	4	112.50	2.00	95.00	10.00	5.50
..............................................................................TAGAACTTCATACCGTGCTCT.........................................................................................................	21	2	224.50	0.50	193.00	12.00	19.00
......................................AGCGAGGTATAGAGTTCC....................................................................................................................................................	18	4	111.00	0.25	97.00	13.50	0.25
............................................................................CTAGGAACTTCATACCGTGCTCT.........................................................................................................	23	4	110.75	17.75	76.50	10.75	5.75
.............................................................................TAGGAACTTCATACCTTGCTCC.........................................................................................................	22	2	213.50	0.00	190.00	13.00	10.50
.............................................................................TAGGAACTTAATACCGTGCCCT.........................................................................................................	22	4	104.25	0.00	101.50	1.25	1.50
.............................................................................TGGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	102.50	0.00	100.25	1.25	1.00
.............................................................................TAGGAACTTAATACTGTGCTCT.........................................................................................................	22	4	99.75	0.00	97.75	1.25	0.75
.............................................................................TAGTAACTTCATACCGTGCTCT.........................................................................................................	22	4	96.00	0.25	79.00	9.50	7.25
.............................................................................TAGGAACTTAATACCGCGCTCT.........................................................................................................	22	4	92.75	0.00	91.00	0.75	1.00
.............................................................................TAGGAACTTCATATCGTGCTCT.........................................................................................................	22	4	90.50	5.25	72.25	11.00	2.00
.............................................................................TAGGAACTCCATACCGTGCTCT.........................................................................................................	22	4	88.25	3.50	74.00	8.00	2.75
.............................................................................TAGGAACTTCATACCGTCCTCT.........................................................................................................	22	4	86.25	6.00	70.75	5.25	4.25
.............................................................................TATGAACTTCATACCGTGCTC..........................................................................................................	21	4	80.25	0.00	73.25	6.50	0.50
.............................................................................TAGGAGCTTCATACCGTGCTC..........................................................................................................	21	4	79.50	0.00	76.00	3.50	0.00
.............................................................................TACGAACTTAATACCGTGCTCT.........................................................................................................	22	4	77.25	0.00	75.00	0.75	1.50
.............................................................................TAGGAACTTCATACCGGGCTCC.........................................................................................................	22	2	153.50	0.00	141.00	6.50	6.00
.............................................................................TAGGAACTTAATGCCGTGCTCT.........................................................................................................	22	4	75.00	0.00	74.25	0.00	0.75
.............................................................................TAGGAACTTAATACCCTGCTCT.........................................................................................................	22	4	71.25	0.25	69.50	0.75	0.75
.............................................................................TAGGAACTTAATACCATGCTCT.........................................................................................................	22	4	65.75	0.25	63.00	0.75	1.75
.............................................................................TAGGAACTTAATACCTTGCTC..........................................................................................................	21	4	65.25	0.00	64.75	0.00	0.50
.............................................................................TAGCAACTTCATACCGTGCTCT.........................................................................................................	22	4	64.00	2.00	51.75	5.25	5.00
.............................................................................TAGGAACTTCATACCGTGCTCTTT.......................................................................................................	24	4	63.00	0.25	32.25	30.50	0.00
.............................................................................TAGAAACTTCATACCGTGCTCT.........................................................................................................	22	4	63.00	0.50	50.25	7.50	4.75
.............................................................................TAGGAACTTAATACCGAGCTCT.........................................................................................................	22	4	62.00	0.00	60.75	0.50	0.75
.............................................................................TATGAACTTCATACCGTGCTCC.........................................................................................................	22	2	118.00	0.00	105.00	6.50	6.50
...............................................................................TGAACTTAATACCGTGCTCT.........................................................................................................	20	4	58.50	0.00	57.00	0.50	1.00
.............................................................................TAGGAACTTAATACCGTGCTT..........................................................................................................	21	4	57.50	0.00	56.00	1.25	0.25
.............................................................................AAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	57.50	4.50	39.00	9.00	5.00
.............................................................................TAGGAGCTTAATACCGTGCTCT.........................................................................................................	22	4	56.50	0.00	55.50	0.50	0.50
.............................................................................TAAGAACTTCATACCGTGCTCT.........................................................................................................	22	4	56.00	4.75	42.75	7.00	1.50
.............................................................................TAGGAACTTAATACCGTGCTCTA........................................................................................................	23	4	55.75	0.00	54.75	0.25	0.75
.............................................................................TAGGTACTTCATACCGTGCTCT.........................................................................................................	22	4	55.50	13.25	37.25	3.00	2.00
.............................................................................TAGGAACTTCATACCGTGCCC..........................................................................................................	21	4	54.75	0.00	46.50	7.25	1.00
.............................................................................TAGGAACTTAATACAGTGCTCT.........................................................................................................	22	4	54.75	0.00	54.00	0.75	0.00
.............................................................................TAGGAACTTCATACCGTGCTCA.........................................................................................................	22	4	53.25	0.25	38.75	12.00	2.25
..............................................................................AGGAACTTAATACCGTGCTCT.........................................................................................................	21	4	53.00	0.00	50.75	1.00	1.25
.............................................................................TAGGAACTTCATACCGGGCTC..........................................................................................................	21	4	50.50	0.00	45.25	5.00	0.25
.............................................................................TAGGAATTTCATACCGTGCTCT.........................................................................................................	22	4	50.50	2.25	40.75	5.25	2.25
.............................................................................TAGGAACTTGATACCGTGCTCT.........................................................................................................	22	4	50.25	0.25	44.75	4.00	1.25
.............................................................................TAGGGACTTCATACCGTGCTCC.........................................................................................................	22	2	100.00	0.00	89.50	7.00	3.50
.............................................................................TAGGAACTTCATACCxTGCTCC.........................................................................................................	21	2	95.50	0.00	83.00	6.00	6.50
.............................................................................TAGGGACTTCATACCGTGCTC..........................................................................................................	21	4	46.25	0.00	41.00	5.25	0.00
.................................................................................AACTTCATACCGTGCTCT.........................................................................................................	18	4	46.00	0.00	38.75	5.00	2.25
.............................................................................TAGGAACTTCATACTGTGCTC..........................................................................................................	21	4	45.50	0.00	41.50	4.00	0.00
.............................................................................TAGGAAATTCATACCGTGCTCT.........................................................................................................	22	4	44.00	20.00	19.50	3.50	1.00

droSec1

CCAAGATAT-------TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAA---TGC-----------------------------AAA----------------------------------AATCC-	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
......................................AGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	512253.00	229426.75	13168.25	269658.00
.............................................................................TAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	67278.25	8246.00	11447.00	47585.25
.............................................................................TAGGAACTTCATACCGTGCTC..........................................................................................................	21	4	7512.25	844.75	114.75	6552.75
.......................................GCGAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	5803.50	3104.75	78.00	2620.75
.............................................................................TAGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	4270.50	91.25	164.50	4014.75
......................................AGCGAGGTATAGAGTTCCT...................................................................................................................................................	19	4	3100.25	499.75	8.75	2591.75
......................................AGCGAGGTATAGAGTTCCCACG................................................................................................................................................	22	4	2166.50	1841.75	13.50	311.25
......................................AGCGAGGTATAGAGTTCCTAC.................................................................................................................................................	21	4	2165.50	1405.00	56.00	704.50
......................................AGCGAGGTATAGAGTTCCAACG................................................................................................................................................	22	4	1911.00	1538.75	3.25	369.00
.............................................................................TAGGAACTTCATACCGTGCTCTT........................................................................................................	23	4	1365.75	194.50	66.00	1105.25
.............................................................................TAGGAACTTAATACCGTGCTC..........................................................................................................	21	4	1022.25	20.00	2.00	1000.25
......................................AGCGCGGTATAGAGTTCCTACG................................................................................................................................................	22	4	973.00	544.50	21.00	407.50
......................................AGCGAGGCATAGAGTTCCTACG................................................................................................................................................	22	4	873.00	516.75	14.50	341.75
.............................................................................TAGGAACTTCATACCGTGCT...........................................................................................................	20	4	722.50	115.50	24.50	582.50
......................................AGCGAGGTATAGAGTTCCGACG................................................................................................................................................	22	4	720.00	698.50	1.00	20.50
......................................AGCGGGGTATAGAGTTCCTACG................................................................................................................................................	22	4	588.75	344.75	16.00	228.00
......................................AGCGAGGTATAGAGTTCCTA..................................................................................................................................................	20	4	554.50	352.25	6.25	196.00
......................................AGCGAGGTATAGAGTTCCTACA................................................................................................................................................	22	4	504.00	162.50	9.75	331.75
......................................AGCGAGGAATAGAGTTCCTACG................................................................................................................................................	22	4	485.25	137.00	5.75	342.50
......................................AGCGAGGTATAGAGCTCCTACG................................................................................................................................................	22	4	446.50	230.50	19.50	196.50
......................................AGCGAGGTATAGAGTCCCTACG................................................................................................................................................	22	4	445.75	230.00	17.00	198.75
......................................AGCGAGGTGTAGAGTTCCTACG................................................................................................................................................	22	4	435.00	164.00	27.50	243.50
......................................AGCGAGGTATAGAGTTCCTACGT...............................................................................................................................................	23	4	425.00	256.50	6.25	162.25
......................................AGCGAGGTATAGAGTTCCTCCG................................................................................................................................................	22	4	419.75	176.00	12.50	231.25
......................................AGCGAGGTACAGAGTTCCTACG................................................................................................................................................	22	4	415.50	197.25	13.50	204.75
......................................AGCGAGGTATAGAGTTCCTACC................................................................................................................................................	22	4	403.00	231.00	8.00	164.00
......................................AGCGAGGTATATAGTTCCTACG................................................................................................................................................	22	4	396.75	111.25	15.00	270.50
......................................AGCGAGGTATAGAGTTCCTACT................................................................................................................................................	22	4	396.00	193.25	5.75	197.00
......................................AGCGAGGTATGGAGTTCCTACG................................................................................................................................................	22	4	383.75	149.00	11.75	223.00
......................................ATCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	376.25	174.25	9.00	193.00
......................................AGCGAGGTATAGAGTTCCTAAG................................................................................................................................................	22	4	373.75	75.00	5.75	293.00
......................................AGCGAGATATAGAGTTCCTACG................................................................................................................................................	22	4	372.25	65.50	4.50	302.25
......................................GGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	371.75	148.00	15.25	208.50
......................................AGCGAGGTATAGGGTTCCTACG................................................................................................................................................	22	4	358.25	161.00	16.00	181.25
......................................AGCGAGGTATAGCGTTCCTACG................................................................................................................................................	22	4	339.75	203.25	7.25	129.25
......................................AGCGAGGTATAGAGTTCATACG................................................................................................................................................	22	4	333.50	44.00	3.00	286.50
......................................AGCGATGTATAGAGTTCCTACG................................................................................................................................................	22	4	331.25	69.50	3.00	258.75
......................................AACGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	327.25	84.75	4.75	237.75
......................................AGCGAGGxxTAGAGTTCCTACG................................................................................................................................................	20	4	323.25	90.50	42.75	190.00
......................................ACCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	320.00	189.25	10.75	120.00
......................................AGCGAGGGATAGAGTTCCTACG................................................................................................................................................	22	4	311.50	244.75	8.50	58.25
......................................AGCAAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	308.00	81.50	5.50	221.00
......................................AGCGAGGTAAAGAGTTCCTACG................................................................................................................................................	22	4	298.25	15.00	4.50	278.75
......................................AGCGAAGTATAGAGTTCCTACG................................................................................................................................................	22	4	289.00	59.25	7.50	222.25
......................................AGCTAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	288.50	69.75	2.00	216.75
......................................AGCGAGGTATACAGTTCCTACG................................................................................................................................................	22	4	279.25	172.75	5.75	100.75
......................................AGAGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	276.25	90.75	2.25	183.25
......................................AGTGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	269.25	105.75	12.25	151.25
......................................AGCGAGGTATCGAGTTCCTACG................................................................................................................................................	22	4	257.75	120.00	7.00	130.75
......................................AGCGAGGTATAGACTTCCTACG................................................................................................................................................	22	4	255.25	120.00	20.50	114.75
......................................AGCGAGCTATAGAGTTCCTACG................................................................................................................................................	22	4	253.50	115.50	4.50	133.50
......................................AGCGAGGTATAGATTTCCTACG................................................................................................................................................	22	4	247.50	60.75	7.75	179.00
......................................AGCGAGGTATAGAGTTCCTATG................................................................................................................................................	22	4	234.75	77.75	13.00	144.00
......................................AGCGAGGTATAGAGTTCCTGCG................................................................................................................................................	22	4	224.50	96.25	6.00	122.25
......................................AGCGAGGTATAGAGTTACTACG................................................................................................................................................	22	4	215.00	52.75	6.00	156.25
............................................................................CTAGGAACTTCATACCGTGCTCT.........................................................................................................	23	4	214.75	12.50	35.75	166.50
........................................CGAGGTATAGAGTTCCTACG................................................................................................................................................	20	4	199.50	120.25	5.50	73.75
......................................AGCGAGTTATAGAGTTCCTACG................................................................................................................................................	22	4	193.50	56.25	4.75	132.50
.............................................................................TAGGAACTTCATACCGTGCTCTA........................................................................................................	23	4	187.25	25.00	8.25	154.00
......................................AGCGACGTATAGAGTTCCTACG................................................................................................................................................	22	4	186.75	88.75	1.50	96.50
......................................AGCGAGGTATAGAGTTTCTACG................................................................................................................................................	22	4	180.00	65.75	13.25	101.00
......................................AGCCAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	179.25	92.75	3.25	83.25
......................................AGCGAGGTATAAAGTTCCTACG................................................................................................................................................	22	4	172.50	67.75	7.75	97.00
......................................AGCGTGGTATAGAGTTCCTACG................................................................................................................................................	22	4	152.00	83.50	6.50	62.00
......................................AGCGAGGTCTAGAGTTCCTACG................................................................................................................................................	22	4	148.00	82.00	4.00	62.00
.............................................................................TAGGAACTTCATACCGTGCTCTTT.......................................................................................................	24	4	141.00	32.50	2.25	106.25
.............................................................................TAGGAGCTTCATACCGTGCTCT.........................................................................................................	22	4	137.25	8.25	17.50	111.50
.............................................................................TAGGAACTTCATACCTTGCTCT.........................................................................................................	22	4	133.75	17.25	20.75	95.75
.............................................................................TAGGAACTTCATACCGTGATCT.........................................................................................................	22	4	131.50	68.75	1.00	61.75
......................................AGCGAGGTATAGAGTTCTTACG................................................................................................................................................	22	4	128.25	49.75	11.50	67.00
......................................AGCGAGGTATAGAGTTCCTACGTT..............................................................................................................................................	24	4	123.00	71.25	0.00	51.75
......................................AGCGAGGTTTAGAGTTCCTACG................................................................................................................................................	22	4	116.50	38.25	12.25	66.00
......................................AGCGAGGTATAGAATTCCTACG................................................................................................................................................	22	4	116.25	50.00	4.00	62.25
......................................AGCGAGGTATTGAGTTCCTACG................................................................................................................................................	22	4	110.75	42.50	11.25	57.00
.............................................................................TAGGAACTTAATACCGTGCTCTT........................................................................................................	23	4	110.25	3.75	0.50	106.00
.............................................................................TAGGAACTTCATACTGTGCTCT.........................................................................................................	22	4	105.75	4.25	57.75	43.75
.............................................................................TAGGCACTTCATACCGTGCTCT.........................................................................................................	22	4	103.50	21.00	14.00	68.50
.............................................................................TAGGAACTTCATACCGTGCCCT.........................................................................................................	22	4	96.75	10.50	13.50	72.75
.............................................................................TAGGAACTTCATACCGTGCTT..........................................................................................................	21	4	92.75	27.00	0.25	65.50
.............................................................................TAGTAACTTCATACCGTGCTCT.........................................................................................................	22	4	92.50	6.00	8.25	78.25
.............................................................................TATGAACTTCATACCGTGCTCT.........................................................................................................	22	4	92.00	7.25	8.00	76.75
......................................AGCGAGGTATAGAGTTCC....................................................................................................................................................	18	4	92.00	2.00	2.75	87.25
......................................CGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	91.00	48.00	1.00	42.00
.............................................................................TAGGAACTTCATACCGTGCTCC.........................................................................................................	22	4	90.75	15.25	13.50	62.00
.....................................CAGCGAGGTATAGAGTTCCTACG................................................................................................................................................	23	4	90.00	39.50	2.75	47.75
......................................AGCGAxGTATAGAGTTCCTACG................................................................................................................................................	21	4	89.00	38.25	8.00	42.75
......................................AGCGAGGTATAGAGTTCCTACGA...............................................................................................................................................	23	4	87.25	54.75	0.50	32.00
.............................................................................TAGGAACTTCATACCGCGCTCT.........................................................................................................	22	4	86.25	12.00	25.25	49.00
.............................................................................TAGGAAATTCATACCGTGCTCT.........................................................................................................	22	4	85.50	2.00	3.75	79.75
.............................................................................TAGGAACTTCATACCGTGTTCT.........................................................................................................	22	4	84.25	48.00	19.50	16.75
......................................AGCGAGGTATAGAGTTCCTTT.................................................................................................................................................	21	4	69.75	33.00	0.00	36.75
.............................................................................TAGGAACTTCGTACCGTGCTCT.........................................................................................................	22	4	69.25	7.00	15.25	47.00
......................................AGCGAGGTATAGAGTTCCTACGC...............................................................................................................................................	23	4	67.25	25.75	1.75	39.75
.............................................................................TAGGGACTTCATACCGTGCTCT.........................................................................................................	22	4	65.25	11.00	16.25	38.00
.............................................................................TAGCAACTTCATACCGTGCTCT.........................................................................................................	22	4	64.75	5.75	4.75	54.25
.............................................................................TACGAACTTCATACCGTGCTCT.........................................................................................................	22	4	64.75	5.50	7.00	52.25
......................................AGCGAGGTATAGAGTTCGTACG................................................................................................................................................	22	4	63.50	24.00	1.25	38.25
.............................................................................TAGGAACCTCATACCGTGCTCT.........................................................................................................	22	4	62.25	8.00	15.50	38.75
.........................................GAGGTATAGAGTTCCTACG................................................................................................................................................	19	4	61.50	17.50	2.50	41.50
.............................................................................TAGGAACTTCATACCGTTCTCT.........................................................................................................	22	4	60.00	7.00	9.00	44.00
.............................................................................TAGGAACTTCACACCGTGCTCT.........................................................................................................	22	4	59.25	9.00	12.25	38.00

droYak2

GCAAGATAT-------TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAA---TGC-----------------------------AAA----------------------------------AATCC-	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
.............................................................................TAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	129775.00	5097.50	16401.00	2516.00	30641.75	75118.75
......................................AGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	68822.25	6875.75	8313.75	35373.00	18223.50	36.25
.............................................................................TAGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	43742.50	32.50	1592.25	23.25	3944.50	38150.00
.............................................................................TAGGAACTTCATACCGTGCTC..........................................................................................................	21	4	16227.00	17.50	2882.25	224.75	5536.50	7566.00
.............................................................................TAGGAACTTCATACCGTGCTCC.........................................................................................................	22	4	13350.25	4.00	22.25	4.25	49.75	13270.00
.............................................................................TAGGAACTTAATACCGTGCTCC.........................................................................................................	22	4	6540.25	0.25	3.00	0.00	6.25	6530.75
.............................................................................TAGGAACTTAATACCGTGCTC..........................................................................................................	21	4	4199.00	0.75	362.50	5.75	937.50	2892.50
.............................................................................TAGGAACTTCATACCGTGCT...........................................................................................................	20	4	2518.50	3.50	270.75	29.25	513.50	1701.50
.............................................................................TAGGAACTTCATACCGTGCTCG.........................................................................................................	22	4	2164.00	1.75	10.50	0.50	22.25	2129.00
.............................................................................TAGGAACTTCATACCGTGCTCTT........................................................................................................	23	4	1219.25	13.00	263.50	46.25	509.50	387.00
.......................................GCGAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	1160.50	47.50	105.75	792.25	214.25	0.75
.............................................................................TAGGAACTTAATACCGTGCTCG.........................................................................................................	22	4	1043.25	0.00	1.25	0.00	6.50	1035.50
.............................................................................TAGGAACTTAATACCGTGCT...........................................................................................................	20	4	705.50	0.00	22.25	0.00	61.25	622.00
......................................AGCGAGGTATAGAGTTCCTAC.................................................................................................................................................	21	4	521.50	1.75	83.25	219.25	214.75	2.50
......................................AGCGAGGGATAGAGTTCCTACG................................................................................................................................................	22	4	429.75	27.75	48.25	19.00	334.75	0.00
......................................AGCGAGGTATAGAGTTCCTCCG................................................................................................................................................	22	4	364.00	21.00	46.00	17.25	279.75	0.00
.............................................................................TAGGAACTTCATACCGCGCTCT.........................................................................................................	22	4	354.75	15.25	67.25	4.25	221.00	47.00
......................................AGCGAGGTATAGAGTTCCT...................................................................................................................................................	19	4	338.25	0.75	61.00	101.75	169.50	5.25
.............................................................................TAGGAACTTCATACCGTGCC...........................................................................................................	20	4	294.50	0.00	0.50	0.00	0.25	293.75
......................................AGCGAGGTATAGAGTTCCTACGT...............................................................................................................................................	23	4	291.50	0.50	70.00	88.50	132.00	0.50
.............................................................................TAGGAACTTCATACCTTGCTCT.........................................................................................................	22	4	277.50	2.50	18.25	4.75	61.25	190.75
.............................................................................TAGGAACTTAATACCGTGCTCTT........................................................................................................	23	4	268.00	0.00	24.00	0.50	63.75	179.75
.............................................................................TAGGGACTTCATACCGTGCTCT.........................................................................................................	22	4	267.25	11.75	45.25	2.25	167.75	40.25
......................................AGCGAGGTATAGCGTTCCTACG................................................................................................................................................	22	4	238.25	17.75	13.75	111.00	95.75	0.00
.............................................................................TAGGAGCTTCATACCGTGCTCT.........................................................................................................	22	4	233.00	7.25	46.00	1.50	145.75	32.50
.............................................................................TAGGAACTTAATACCTTGCTCT.........................................................................................................	22	4	231.75	0.00	2.25	0.00	7.00	222.50
......................................AGCGAGGCATAGAGTTCCTACG................................................................................................................................................	22	4	229.50	13.75	14.50	73.50	127.75	0.00
......................................AGCGAGGTATAGAGTTCCTA..................................................................................................................................................	20	4	219.75	0.75	38.25	86.25	94.00	0.50
......................................AGCGAGGTATAGAGTTCCTACT................................................................................................................................................	22	4	215.25	6.25	37.50	58.50	112.00	1.00
.............................................................................TAGGAACTTCATACCGGGCTCT.........................................................................................................	22	4	206.75	4.75	22.25	5.00	92.50	82.25
......................................AGCGCGGTATAGAGTTCCTACG................................................................................................................................................	22	4	192.50	12.50	17.00	23.00	140.00	0.00
.............................................................................TAGCAACTTCATACCGTGCTCT.........................................................................................................	22	4	190.25	4.00	43.25	1.00	130.00	12.00
.............................................................................TGGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	176.25	5.75	19.00	1.00	88.25	62.25
......................................AGCGAGGTATAGAGCTCCTACG................................................................................................................................................	22	4	172.50	20.25	28.00	32.00	92.25	0.00
.............................................................................TAGGAACGTCATACCGTGCTCT.........................................................................................................	22	4	168.25	3.25	23.25	0.00	140.00	1.75
.............................................................................TAGGAACTTCATACCGTGCCCT.........................................................................................................	22	4	166.75	6.75	24.50	5.50	37.00	93.00
............................................................................CTAGGAACTTCATACCGTGCTCT.........................................................................................................	23	4	160.75	13.75	34.50	3.50	87.25	21.75
.............................................................................TAGGAACTTCCTACCGTGCTCT.........................................................................................................	22	4	159.75	14.00	25.50	1.25	117.00	2.00
.............................................................................TAGGCACTTCATACCGTGCTCT.........................................................................................................	22	4	156.50	7.50	17.00	3.50	118.25	10.25
.............................................................................TAGGAACTTCATACCGTTCTCT.........................................................................................................	22	4	156.00	3.75	51.25	4.50	64.75	31.75
.............................................................................TAGGAAATTCATACCGTGCTCT.........................................................................................................	22	4	151.25	14.25	20.25	0.75	97.50	18.50
.............................................................................TAGGAACTTCATACAGTGCTCT.........................................................................................................	22	4	145.75	9.50	17.25	2.00	73.00	44.00
.............................................................................TAGGAACTTCGTACCGTGCTCT.........................................................................................................	22	4	142.50	8.25	29.50	2.00	73.50	29.25
......................................AGCGGGGTATAGAGTTCCTACG................................................................................................................................................	22	4	137.50	13.00	17.25	25.50	81.75	0.00
.............................................................................TAGGTACTTCATACCGTGCTCT.........................................................................................................	22	4	131.25	9.50	26.50	0.25	91.50	3.50
.............................................................................TAGGAACTTCATACCGTGCTCTA........................................................................................................	23	4	130.75	0.50	30.50	5.25	58.00	36.50
......................................AGCGAGGAATAGAGTTCCTACG................................................................................................................................................	22	4	130.25	5.75	2.75	68.00	53.75	0.00
.............................................................................TAGGAACTTCATACCATGCTCT.........................................................................................................	22	4	130.00	7.50	29.50	2.25	47.00	43.75
.............................................................................TATGAACTTCATACCGTGCTCT.........................................................................................................	22	4	129.00	1.25	9.25	1.75	21.25	95.50
......................................AGCGAGGTATAGAGGTCCTACG................................................................................................................................................	22	4	126.25	22.00	22.75	5.50	76.00	0.00
.............................................................................TAGGAACTTCATACCGAGCTCT.........................................................................................................	22	4	125.75	5.25	17.25	0.25	93.50	9.50
.............................................................................TAGGAACTTCATACCGTGCTT..........................................................................................................	21	4	125.25	0.25	26.75	3.75	43.50	51.00
.............................................................................TAGGAACTTCAGACCGTGCTCT.........................................................................................................	22	4	116.00	4.25	15.75	0.00	96.00	0.00
.............................................................................TAGGAACTTCATAACGTGCTCT.........................................................................................................	22	4	110.00	9.00	39.00	0.00	57.50	4.50
.............................................................................TAGGAACTTCATGCCGTGCTCT.........................................................................................................	22	4	101.50	5.00	9.50	0.75	29.25	57.00
.............................................................................TAGGAACTTAATACCGTGCC...........................................................................................................	20	4	101.00	0.00	0.00	0.00	0.00	101.00
......................................AGCGAGGTATAGAGTTACTACG................................................................................................................................................	22	4	101.00	18.50	17.75	4.75	60.00	0.00
.............................................................................TAGGAACTTCATACTGTGCTCT.........................................................................................................	22	4	100.50	5.25	14.25	2.75	29.25	49.00
......................................AGCGAGGTATCGAGTTCCTACG................................................................................................................................................	22	4	99.00	7.00	7.50	22.50	62.00	0.00
.............................................................................TAGGAACTTAATACCxTGCTCT.........................................................................................................	21	4	95.75	0.00	0.00	0.00	0.50	95.25
.............................................................................TAGGAACTTCATACCGTGC............................................................................................................	19	4	94.50	0.25	1.50	0.00	3.00	89.75
......................................AGAGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	94.00	15.50	15.00	10.50	53.00	0.00
.............................................................................TAGGAACTTCACACCGTGCTCT.........................................................................................................	22	4	94.00	6.00	20.25	1.00	40.50	26.25
.............................................................................TAGGAACTTCATACCCTGCTCT.........................................................................................................	22	4	91.50	1.50	14.25	0.75	41.75	33.25
.............................................................................TAAGAACTTCATACCGTGCTCT.........................................................................................................	22	4	89.50	6.75	35.00	0.25	33.25	14.25
......................................AGCGAGGTATAGAGTTCCTAAG................................................................................................................................................	22	4	88.25	29.00	15.00	7.75	36.50	0.00
......................................AGCGAGGTATAGAGTTCCTACC................................................................................................................................................	22	4	88.00	4.25	9.00	39.00	35.75	0.00
.............................................................................TAGGAACCTCATACCGTGCTCT.........................................................................................................	22	4	87.75	5.75	18.75	1.50	29.25	32.50
.............................................................................TAGGAACTTTATACCGTGCTCT.........................................................................................................	22	4	87.75	4.00	11.50	0.75	30.50	41.00
.............................................................................CAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	87.00	2.75	16.25	1.75	40.75	25.50
.............................................................................TAGGAACTTCATACCGTCCTCT.........................................................................................................	22	4	84.50	2.00	7.50	2.50	52.00	20.50
......................................AGCGAGGTATAGAGTTCCTATG................................................................................................................................................	22	4	83.50	9.00	10.25	11.75	52.25	0.25
.............................................................................TAGGAACTTCATACCxTGCTCT.........................................................................................................	21	4	82.00	0.00	0.25	1.75	0.75	79.25
.............................................................................TAGGAACTTCATACCGTGATCT.........................................................................................................	22	4	82.00	9.25	17.50	0.25	35.25	19.75
.............................................................................TAGGAACTTCATCCCGTGCTCT.........................................................................................................	22	4	79.25	4.25	10.75	1.75	57.25	5.25
......................................AGCGAGGTATAGAGTTCCTACA................................................................................................................................................	22	4	79.00	5.25	14.00	33.25	26.50	0.00
......................................AGCGAGGTATAGAGTTCCGACG................................................................................................................................................	22	4	78.75	10.25	12.50	1.75	54.25	0.00
......................................AGCGAGGTATAGTGTTCCTACG................................................................................................................................................	22	4	78.25	6.00	7.75	2.75	61.75	0.00
......................................AGCGAGGTATAGAGTTCC....................................................................................................................................................	18	4	77.75	0.25	19.25	0.75	52.50	5.00
.............................................................................TAGGAACTTCATACCGTGCG...........................................................................................................	20	4	76.50	0.00	0.25	0.00	0.25	76.00
......................................AGCGAGGTATAGAGTCCCTACG................................................................................................................................................	22	4	75.75	7.50	7.25	33.00	28.00	0.00
.............................................................................TAGGAACTTCATACCGTACTCT.........................................................................................................	22	4	75.00	2.25	12.75	1.00	29.50	29.50
.............................................................................TAGGAACTTCATACCGTGCGCT.........................................................................................................	22	4	74.50	3.25	7.25	0.50	54.50	9.00
......................................AGCGAGGTGTAGAGTTCCTACG................................................................................................................................................	22	4	72.75	8.25	12.50	29.00	23.00	0.00
......................................AGCGAGGTATAGGGTTCCTACG................................................................................................................................................	22	4	72.25	9.00	9.25	26.50	27.50	0.00
.............................................................................TACGAACTTCATACCGTGCTCT.........................................................................................................	22	4	72.25	0.75	7.50	0.50	15.25	48.25
......................................AGCGAGGTATAGAGATCCTACG................................................................................................................................................	22	4	71.50	15.00	10.75	4.25	41.50	0.00
.............................................................................TAGGAACTCCATACCGTGCTCT.........................................................................................................	22	4	69.50	3.50	12.50	3.25	27.25	23.00
......................................AGCGAGGTATAGAGTTCCCACG................................................................................................................................................	22	4	68.75	7.75	9.50	25.25	26.25	0.00
.............................................................................TAGGAACTTCATACCGTGCTAT.........................................................................................................	22	4	68.25	9.00	15.00	0.00	26.75	17.50
.............................................................................TAGGACCTTCATACCGTGCTCT.........................................................................................................	22	4	66.00	1.25	7.50	0.50	51.75	5.00
.............................................................................TATGAACTTAATACCGTGCTCT.........................................................................................................	22	4	65.75	0.00	0.75	0.00	3.50	61.50
......................................AGCGAGGTATAGAGTTCATACG................................................................................................................................................	22	4	64.75	11.75	9.75	4.75	38.50	0.00
......................................AGCGAGGTACAGAGTTCCTACG................................................................................................................................................	22	4	64.25	4.50	8.00	28.75	23.00	0.00
.............................................................................TAGGAACTTAATACCGGGCTCT.........................................................................................................	22	4	63.25	0.25	2.50	0.00	13.00	47.50
......................................AGCGAGGTATGGAGTTCCTACG................................................................................................................................................	22	4	62.25	6.00	9.50	20.75	26.00	0.00
.............................................................................TCGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	61.50	3.25	9.00	0.25	47.00	2.00
......................................AGCGAGGTATATAGTTCCTACG................................................................................................................................................	22	4	60.25	2.25	5.50	11.00	41.50	0.00
......................................AGCGTGGTATAGAGTTCCTACG................................................................................................................................................	22	4	59.50	7.25	4.75	7.50	40.00	0.00
.............................................................................AAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	58.25	2.50	10.75	0.75	39.50	4.75
.............................................................................TAGGAACTGCATACCGTGCTCT.........................................................................................................	22	4	57.50	0.75	6.25	0.00	48.25	2.25

droEre2

GCAAGATAT-------T-TTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAA---TGC-----------------------------AAA----------------------------------AATCC-	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
.............................................................................TAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	107541.50	4156.00	20751.25	1578.00	81056.25
......................................AGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	26150.50	2274.50	873.25	3450.00	19552.75
.............................................................................TAGGAACTTCATACCGTGCTC..........................................................................................................	21	4	11657.00	24.25	2691.00	14.75	8927.00
.............................................................................TAGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	8874.25	33.50	1660.75	15.00	7165.00
.............................................................................TAGGAACTTAATACCGTGCTC..........................................................................................................	21	4	1700.00	0.50	314.25	0.00	1385.25
.............................................................................TATGAACTTCATACCGTGCTCT.........................................................................................................	22	4	1072.25	12.25	4.00	8.00	1048.00
.............................................................................TAGGAACTTCATACCGTGCTCTT........................................................................................................	23	4	970.00	5.75	202.25	10.75	751.25
.............................................................................TAGGAACTTCATACCGTGCT...........................................................................................................	20	4	876.00	3.00	213.00	0.75	659.25
.............................................................................TAGGAACTTCATACAGTGCTCT.........................................................................................................	22	4	780.00	4.50	32.75	1.00	741.75
.............................................................................TAGGAACTTCATACCGTGCTAT.........................................................................................................	22	4	714.75	5.25	23.50	1.50	684.50
.............................................................................TAGTAACTTCATACCGTGCTCT.........................................................................................................	22	4	577.00	13.75	8.25	5.50	549.50
.............................................................................TAGGAACTTCATACCGTTCTCT.........................................................................................................	22	4	425.50	46.50	45.50	19.50	314.00
.............................................................................TAGGAACTTCATACCGTGATCT.........................................................................................................	22	4	394.75	4.75	29.50	1.75	358.75
......................................AGCGAGGTATAGAGTTCCT...................................................................................................................................................	19	4	345.00	1.25	40.00	1.00	302.75
............................................................................CTAGGAACTTCATACCGTGCTCT.........................................................................................................	23	4	343.50	15.00	53.00	3.75	271.75
.............................................................................TAGGAACTTCATACCTTGCTCT.........................................................................................................	22	4	338.75	23.75	40.75	9.75	264.50
......................................AGCGAGGTATAGAGTTCCTAC.................................................................................................................................................	21	4	286.00	7.25	66.75	6.75	205.25
.............................................................................TAGGAACTTCATACCGCGCTCT.........................................................................................................	22	4	257.75	33.00	79.50	12.00	133.25
......................................AGCGAGGTATATAGTTCCTACG................................................................................................................................................	22	4	241.00	16.25	1.00	26.25	197.50
.............................................................................TAGGAGCTTCATACCGTGCTCT.........................................................................................................	22	4	234.50	6.75	62.50	3.00	162.25
.............................................................................TAAGAACTTCATACCGTGCTCT.........................................................................................................	22	4	218.50	8.25	86.00	3.00	121.25
.............................................................................TAGGCACTTCATACCGTGCTCT.........................................................................................................	22	4	216.25	11.25	34.75	2.75	167.50
.......................................GCGAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	197.25	13.50	8.00	17.00	158.75
......................................AGCTAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	196.50	4.75	0.00	9.50	182.25
.............................................................................TAGGAAATTCATACCGTGCTCT.........................................................................................................	22	4	192.75	7.00	29.75	2.00	154.00
......................................AGCGAGGTATAGAGTTCCTACT................................................................................................................................................	22	4	191.25	38.75	5.00	42.50	105.00
.............................................................................TAGGAACTTCATAACGTGCTCT.........................................................................................................	22	4	183.75	5.75	22.00	0.75	155.25
......................................AGCGATGTATAGAGTTCCTACG................................................................................................................................................	22	4	182.25	8.75	1.00	7.50	165.00
......................................AGCGAGGTATAGAGTTCATACG................................................................................................................................................	22	4	174.25	1.50	1.25	1.50	170.00
.............................................................................TAGGAACTTCATACTGTGCTCT.........................................................................................................	22	4	155.50	5.25	35.25	2.25	112.75
.............................................................................TAGGAACTTCATACCATGCTCT.........................................................................................................	22	4	154.75	13.25	28.00	3.00	110.50
......................................AGCGAGGTATAGAGTTCCTA..................................................................................................................................................	20	4	154.00	1.25	37.75	0.50	114.50
.............................................................................TAGGAACTTCATACCGTGCTCC.........................................................................................................	22	4	151.00	4.00	28.25	1.25	117.50
.............................................................................TAGCAACTTCATACCGTGCTCT.........................................................................................................	22	4	143.75	12.00	53.75	5.00	73.00
......................................AGCGAGGTATAGAGTTCC....................................................................................................................................................	18	4	143.50	0.50	12.75	0.25	130.00
......................................ATCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	143.25	6.00	0.00	6.25	131.00
.............................................................................TACGAACTTCATACCGTGCTCT.........................................................................................................	22	4	139.75	10.75	6.50	4.00	118.50
.............................................................................TAGGGACTTCATACCGTGCTCT.........................................................................................................	22	4	134.75	10.75	39.25	6.00	78.75
......................................AGAGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	125.50	2.00	1.25	2.50	119.75
.............................................................................TAGGAACTTCATACCGTGCCCT.........................................................................................................	22	4	123.00	6.75	20.75	2.50	93.00
.............................................................................TAGGAACTTCGTACCGTGCTCT.........................................................................................................	22	4	117.25	4.50	37.25	2.75	72.75
......................................AGCGAGGTATAGAGTTACTACG................................................................................................................................................	22	4	116.75	5.50	1.75	7.00	102.50
.............................................................................TAGGAACTTCATACCGTCCTCT.........................................................................................................	22	4	111.50	12.50	17.75	2.75	78.50
.............................................................................TATGAACTTCATACCGTGCTC..........................................................................................................	21	4	109.75	0.25	0.75	0.00	108.75
.............................................................................TAGGAACTTCATACCGTGCTCTA........................................................................................................	23	4	107.75	1.25	22.75	0.50	83.25
.............................................................................TAGGAACCTCATACCGTGCTCT.........................................................................................................	22	4	106.50	4.00	17.25	2.00	83.25
.............................................................................TAGGAACTTCACACCGTGCTCT.........................................................................................................	22	4	102.25	7.00	21.50	2.00	71.75
.............................................................................TAGGAACTTCATACCCTGCTCT.........................................................................................................	22	4	99.00	12.75	17.00	2.50	66.75
.............................................................................CAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	97.75	10.25	15.25	1.25	71.00
.............................................................................TAGGAACTCCATACCGTGCTCT.........................................................................................................	22	4	96.75	3.50	11.50	2.25	79.50
.............................................................................TAGAAACTTCATACCGTGCTCT.........................................................................................................	22	4	91.25	6.25	12.25	1.50	71.25
.............................................................................TATGAACTTAATACCGTGCTCT.........................................................................................................	22	4	89.75	0.00	0.50	0.00	89.25
.............................................................................TAGGAACTTCATACCGTACTCT.........................................................................................................	22	4	88.75	7.00	22.50	2.00	57.25
.............................................................................TGGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	88.50	5.25	22.25	1.00	60.00
.............................................................................TAGGAACTTCATACAGTGCTC..........................................................................................................	21	4	88.50	0.00	3.50	0.00	85.00
......................................AGCGAGGTATAGAGTTCCTACGT...............................................................................................................................................	23	4	86.50	0.25	4.25	1.50	80.50
.............................................................................TAGGAACTTCCTACCGTGCTCT.........................................................................................................	22	4	84.50	11.00	28.75	3.00	41.75
.............................................................................TAGGAACTTCATACCGGGCTCT.........................................................................................................	22	4	83.50	14.50	26.00	5.75	37.25
.............................................................................TAGGAACTTCATACCGTGCTA..........................................................................................................	21	4	83.50	0.00	8.00	0.00	75.50
......................................AGCGAGGCATAGAGTTCCTACG................................................................................................................................................	22	4	82.25	13.50	2.75	16.75	49.25
.............................................................................TAGGAACTTAATACCGTGCT...........................................................................................................	20	4	82.25	0.00	21.50	0.00	60.75
.............................................................................TAGGAACTTCATACCGTGCTCTTT.......................................................................................................	24	4	78.50	0.00	14.25	0.50	63.75
.............................................................................TAGGAACTTAATACAGTGCTCT.........................................................................................................	22	4	75.00	0.00	2.75	0.00	72.25
.............................................................................TAGGAACTTTATACCGTGCTCT.........................................................................................................	22	4	73.25	5.25	12.00	1.25	54.75
......................................AGCGCGGTATAGAGTTCCTACG................................................................................................................................................	22	4	71.75	6.25	1.50	7.00	57.00
.............................................................................TAGGAACTTCATATCGTGCTCT.........................................................................................................	22	4	71.50	4.25	15.50	1.25	50.50
......................................AGCGAGGTATAGATTTCCTACG................................................................................................................................................	22	4	70.50	7.00	0.25	12.00	51.25
.............................................................................TAGGAACTTCATGCCGTGCTCT.........................................................................................................	22	4	68.75	3.50	15.75	1.75	47.75
......................................AGCGAGGTATAGAGTTCCTCCG................................................................................................................................................	22	4	67.75	11.75	7.25	27.75	21.00
.............................................................................TCGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	67.50	3.25	13.75	1.50	49.00
.............................................................................TAGGAACTTCATACCGAGCTCT.........................................................................................................	22	4	66.50	10.00	33.50	3.50	19.50
......................................AGCGAGGTATAGAGTTCCTAAG................................................................................................................................................	22	4	64.00	3.50	1.75	4.00	54.75
......................................AGCGAGGGATAGAGTTCCTACG................................................................................................................................................	22	4	63.75	17.75	5.25	21.50	19.25
.............................................................................TAGGAACTTAATACCGTGCTAT.........................................................................................................	22	4	61.75	0.00	3.00	0.00	58.75
.............................................................................TAGGAACTTAATACCGTGCTCTT........................................................................................................	23	4	59.75	0.00	12.25	0.00	47.50
.............................................................................TAGTAACTTCATACCGTGCTC..........................................................................................................	21	4	58.75	0.25	1.00	0.25	57.25
......................................AGCGAGGTATAGAGCTCCTACG................................................................................................................................................	22	4	58.50	11.50	1.25	16.00	29.75
.............................................................................TAGGAACTTCATACCGTGCTTT.........................................................................................................	22	4	57.25	2.75	15.00	1.00	38.50
.............................................................................TAGGAATTTCATACCGTGCTCT.........................................................................................................	22	4	56.75	2.25	8.25	0.75	45.50
......................................AGCGAGTTATAGAGTTCCTACG................................................................................................................................................	22	4	54.50	7.50	0.00	8.50	38.50
.............................................................................TAGGAACTTCATCCCGTGCTCT.........................................................................................................	22	4	53.50	4.00	18.00	2.50	29.00
......................................AGCGAGGTATAGAGTTCCTACC................................................................................................................................................	22	4	52.25	10.75	1.50	14.50	25.50
.............................................................................TAGTAACTTAATACCGTGCTCT.........................................................................................................	22	4	52.00	0.25	1.50	0.25	50.00
.............................................................................TAGGAACTTCATACCGTGTTCT.........................................................................................................	22	4	51.50	2.25	12.00	0.75	36.50
.............................................................................TAGGTACTTCATACCGTGCTCT.........................................................................................................	22	4	51.25	6.75	23.00	3.25	18.25
.............................................................................TAGGAACTTCATACCGTTCTC..........................................................................................................	21	4	51.00	0.00	6.50	0.00	44.50
.............................................................................TAGGAACTTCATACCGTGCTT..........................................................................................................	21	4	50.50	0.00	12.25	0.00	38.25
......................................AGCGAGGTATAGAGGTCCTACG................................................................................................................................................	22	4	49.00	16.75	1.25	23.50	7.50
.............................................................................TAGGAACTTCATACCGTGCTCTG........................................................................................................	23	4	49.00	0.25	8.75	0.25	39.75
.............................................................................TAGGACCTTCATACCGTGCTCT.........................................................................................................	22	4	48.75	5.75	9.75	0.75	32.50
..............................................................................TAGAACTTCATACCGTGCTCT.........................................................................................................	21	2	97.50	0.00	4.50	0.00	93.00
...............................................................................TGAACTTCATACCGTGCTCT.........................................................................................................	20	4	47.00	0.00	0.25	0.00	46.75
.............................................................................TAGGAACTTCATACCGTGCTCTC........................................................................................................	23	4	45.50	1.50	11.50	1.25	31.25
.............................................................................TAGGAACTTCATACCGTGATC..........................................................................................................	21	4	44.75	0.00	3.50	0.00	41.25
.............................................................................TAGGAACGTCATACCGTGCTCT.........................................................................................................	22	4	44.25	5.50	36.00	0.75	2.00
..............................................................................AGGAACTTCATACCGTGCTCT.........................................................................................................	21	4	44.00	2.00	5.75	0.25	36.00
.............................................................................TAGGAACTTCATACCTTGCTC..........................................................................................................	21	4	42.50	0.00	3.50	0.00	39.00
......................................AGCGAGGTATAGAGTTCCTACA................................................................................................................................................	22	4	42.00	3.75	3.25	7.00	28.00
.............................................................................TAGGAACTTAATACCGTTCTCT.........................................................................................................	22	4	40.50	0.50	3.50	0.25	36.25
.............................................................................TAGGAACTTCATACCGTGC............................................................................................................	19	4	39.75	0.25	2.50	0.00	37.00
......................................AGCGAGGTATACAGTTCCTACG................................................................................................................................................	22	4	38.75	9.50	0.75	12.50	16.00

droAna3

CCAAGATAT-------TTCTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTAACATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCTAAAATCAACGAAA-------ACATAAAGCGGAGTTGGTTTCCCCTTCAACCAAAA----------------------------------AATCA-	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
......................................AGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	250619.00	59482.25	176115.25	14556.25	465.25
.............................................................................TAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	49431.50	5779.00	18592.00	24730.00	330.50
.......................................GCGAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	17267.00	10041.25	6393.75	824.50	7.50
.............................................................................TAGGAACTTCATACCGTGCTC..........................................................................................................	21	4	8427.75	294.25	4772.50	3356.25	4.75
.............................................................................TAGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	3847.25	93.75	1587.25	2160.75	5.50
......................................ATCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	3145.75	607.50	2529.00	7.50	1.75
......................................AGCGAGGTATAGAGTTCCT...................................................................................................................................................	19	4	2562.00	211.00	2178.75	172.00	0.25
......................................AGCGAGGTATATAGTTCCTACG................................................................................................................................................	22	4	1679.00	418.25	1231.00	27.50	2.25
......................................AGCGAGGTATAGAGTTCCTACT................................................................................................................................................	22	4	1357.00	280.50	977.50	86.50	12.50
......................................AGCGAGGTATAGAGTTCCTAC.................................................................................................................................................	21	4	1336.50	311.75	755.00	269.25	0.50
......................................AGCGAGGTATAGAGTTCCTAAG................................................................................................................................................	22	4	1250.75	418.00	802.75	28.75	1.25
.............................................................................TAGGAACTTCATACCGTGCTCTT........................................................................................................	23	4	1238.25	92.75	645.75	499.00	0.75
.............................................................................TAGGAACTTAATACCGTGCTC..........................................................................................................	21	4	1189.75	15.75	676.25	497.75	0.00
......................................AGCTAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	1185.25	150.75	1026.50	5.00	3.00
......................................AGCGAGGTATAGAGTTCCTATG................................................................................................................................................	22	4	1065.75	437.00	587.50	41.00	0.25
......................................AGCGAGGTATAGAGTTCATACG................................................................................................................................................	22	4	812.50	107.75	663.50	41.25	0.00
......................................AGAGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	812.25	141.00	589.00	81.75	0.50
......................................AGCGATGTATAGAGTTCCTACG................................................................................................................................................	22	4	772.00	71.50	691.50	8.50	0.50
......................................AGCGAGGTATAGAGTTACTACG................................................................................................................................................	22	4	675.25	87.75	526.25	60.25	1.00
.............................................................................TAGGAACTTCATACCGTGCT...........................................................................................................	20	4	587.75	55.25	196.75	334.75	1.00
......................................AGCGAGGCATAGAGTTCCTACG................................................................................................................................................	22	4	568.00	104.25	282.25	178.25	3.25
......................................AGCGAGGTATAGAGTTCCTACGT...............................................................................................................................................	23	4	520.50	188.75	209.25	122.25	0.25
......................................AGCGAGGGATAGAGTTCCTACG................................................................................................................................................	22	4	479.75	79.50	37.75	359.75	2.75
......................................AGCGAGGTATAGAGTTCCTAGG................................................................................................................................................	22	4	475.00	268.00	191.50	15.50	0.00
......................................AGGGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	468.75	5.50	453.25	9.50	0.50
.............................................................................TATGAACTTCATACCGTGCTCT.........................................................................................................	22	4	467.50	12.75	426.25	27.25	1.25
......................................AGCGAGGTATGGAGTTCCTACG................................................................................................................................................	22	4	435.25	78.00	333.50	23.50	0.25
......................................AGCGAGGTATAGAGTTCCTA..................................................................................................................................................	20	4	403.75	105.75	171.00	126.75	0.25
......................................GGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	402.00	96.75	283.00	21.00	1.25
.............................................................................TAGGAACTTCATACCGCGCTCT.........................................................................................................	22	4	355.75	7.25	25.25	320.75	2.50
......................................AGCGAGGTATAGAGTCCCTACG................................................................................................................................................	22	4	353.75	124.75	197.25	31.25	0.50
......................................AGCGGGGTATAGAGTTCCTACG................................................................................................................................................	22	4	352.00	57.25	230.50	63.75	0.50
......................................AGCGAGGTATAGAGCTCCTACG................................................................................................................................................	22	4	338.50	51.50	179.25	105.25	2.50
.............................................................................TAGGAACTTCATACCGTGCTAT.........................................................................................................	22	4	328.00	77.00	215.50	34.25	1.25
......................................AGCGAGGTATAGAGTTCC....................................................................................................................................................	18	4	303.00	2.50	158.75	141.75	0.00
......................................AGCGAGGTATAGCGTTCCTACG................................................................................................................................................	22	4	299.25	202.00	43.25	52.25	1.75
......................................AGCGAGGTGTAGAGTTCCTACG................................................................................................................................................	22	4	280.50	56.75	201.50	21.00	1.25
......................................AGCGAGGTATACAGTTCCTACG................................................................................................................................................	22	4	266.75	169.75	56.75	40.00	0.25
......................................AGCGCGGTATAGAGTTCCTACG................................................................................................................................................	22	4	262.50	30.50	167.50	64.00	0.50
......................................AGCGAGGTATAGGGTTCCTACG................................................................................................................................................	22	4	262.00	88.00	150.00	23.25	0.75
.............................................................................TAGGAACTTCATACCGTTCTCT.........................................................................................................	22	4	246.25	38.75	161.75	41.25	4.50
......................................AGCGAGGTATAAAGTTCCTACG................................................................................................................................................	22	4	230.50	161.50	54.50	13.25	1.25
......................................AGCGAGGTATAGATTTCCTACG................................................................................................................................................	22	4	228.00	55.25	162.00	8.75	2.00
......................................AGCGAGGTATAGAGTTCCCACG................................................................................................................................................	22	4	216.75	34.50	145.75	35.25	1.25
.............................................................................TAGGAGCTTCATACCGTGCTCT.........................................................................................................	22	4	214.00	4.50	97.00	111.75	0.75
......................................AGCAAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	213.75	63.75	140.75	8.75	0.50
......................................AGCGAGGTATAGAGTTCCTACA................................................................................................................................................	22	4	213.50	50.75	139.75	21.75	1.25
......................................AGCGAGGTACAGAGTTCCTACG................................................................................................................................................	22	4	211.25	38.25	150.25	22.25	0.50
......................................AACGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	211.00	139.75	55.50	15.75	0.00
......................................ACCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	210.00	106.25	93.00	10.25	0.50
......................................ATCGAGGTATATAGTTCCTACG................................................................................................................................................	22	4	208.00	34.25	173.50	0.00	0.25
.............................................................................TAGGAACTTCATACCGTGATCT.........................................................................................................	22	4	202.00	27.75	127.75	46.25	0.25
......................................AGCGAGGAATAGAGTTCCTACG................................................................................................................................................	22	4	198.50	53.75	15.50	129.25	0.00
......................................AGCGAGGTATAGAGTACCTACG................................................................................................................................................	22	4	192.75	171.25	13.00	8.25	0.25
.......................................GCTAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	192.75	31.50	161.25	0.00	0.00
.............................................................................TAGGAACTTCATACCGTGCTCTTT.......................................................................................................	24	4	190.75	35.50	59.75	95.25	0.25
.............................................................................TAGGGACTTCATACCGTGCTCT.........................................................................................................	22	4	188.00	7.00	26.25	153.50	1.25
......................................AGCGAGGTATAGAGTTCCTGCG................................................................................................................................................	22	4	177.50	25.75	129.25	21.50	1.00
......................................AGCGAGGTATAGACTTCCTACG................................................................................................................................................	22	4	177.50	78.00	76.50	21.75	1.25
......................................AGTGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	169.50	27.25	124.75	17.50	0.00
......................................AGCGAGATATAGAGTTCCTACG................................................................................................................................................	22	4	168.50	63.00	96.25	8.75	0.50
......................................AGCGAGGTATCGAGTTCCTACG................................................................................................................................................	22	4	160.75	103.75	36.00	21.00	0.00
......................................ATCGAGGTATAGAGTTCCTACT................................................................................................................................................	22	4	156.00	27.25	128.00	0.50	0.25
.............................................................................TAGGAAATTCATACCGTGCTCT.........................................................................................................	22	4	150.75	4.00	7.25	139.00	0.50
......................................AGCGAGGTATAGTGTTCCTACG................................................................................................................................................	22	4	145.00	95.50	13.00	36.00	0.50
......................................AGCGAGGTATAGAGTTCCTACC................................................................................................................................................	22	4	145.00	27.75	71.50	42.75	3.00
.......................................GCGAGGTATAGAGTTCCTACT................................................................................................................................................	21	4	144.00	95.00	45.25	3.00	0.75
......................................AGCGAGTTATAGAGTTCCTACG................................................................................................................................................	22	4	142.75	32.75	102.75	6.25	1.00
.............................................................................TAGGAACTTCATACAGTGCTCT.........................................................................................................	22	4	141.00	8.00	45.50	87.50	0.00
.............................................................................TAGCAACTTCATACCGTGCTCT.........................................................................................................	22	4	138.00	7.50	9.75	120.25	0.50
.............................................................................TAGGAACTTCATACCGAGCTCT.........................................................................................................	22	4	138.00	2.25	4.75	130.75	0.25
.......................................GCGAGGTATAGAGTTCCTACA................................................................................................................................................	21	4	137.00	103.00	33.00	1.00	0.00
......................................AGCGAGGxxTAGAGTTCCTACG................................................................................................................................................	20	4	134.50	22.75	111.50	0.25	0.00
.............................................................................TAGGAACTTCAGACCGTGCTCT.........................................................................................................	22	4	132.50	28.25	0.50	103.00	0.75
......................................AGCGAGGTATAGAATTCCTACG................................................................................................................................................	22	4	129.75	68.25	51.75	9.50	0.25
.............................................................................TAGTAACTTCATACCGTGCTCT.........................................................................................................	22	4	127.25	13.25	82.00	31.25	0.75
......................................AGCGAGGTATAGAGTTCCTCCG................................................................................................................................................	22	4	126.50	20.75	37.00	64.50	4.25
.............................................................................TAGGAACGTCATACCGTGCTCT.........................................................................................................	22	4	125.00	0.50	0.50	124.00	0.00
......................................AGCGAGGTATAGAGTTCCTACGTT..............................................................................................................................................	24	4	122.50	37.75	60.00	24.75	0.00
......................................AGCGTGGTATAGAGTTCCTACG................................................................................................................................................	22	4	122.00	16.25	76.00	29.25	0.50
.......................................GCGAGGTATAGAGTTCCTAC.................................................................................................................................................	20	4	119.00	58.75	53.75	6.50	0.00
......................................AGCGAGGTATAGAGTTTCTACG................................................................................................................................................	22	4	115.75	20.00	84.50	10.50	0.75
......................................AGCGAGGTATAGAGTTCTTACG................................................................................................................................................	22	4	115.25	16.50	73.50	25.25	0.00
......................................AGCGAGGTATAGAGTTCCTACGC...............................................................................................................................................	23	4	113.50	41.75	41.00	30.75	0.00
.............................................................................TAGGAACTTCATACCTTGCTCT.........................................................................................................	22	4	113.00	20.00	34.00	58.00	1.00
.............................................................................TAGGAACTTCATACCGGGCTCT.........................................................................................................	22	4	109.25	1.50	4.50	102.50	0.75
.......................................GCGAGGTATATAGTTCCTACG................................................................................................................................................	21	4	108.75	57.75	49.50	1.50	0.00
......................................AGCGAGGTATAGAGTGCCTACG................................................................................................................................................	22	4	108.25	79.75	5.25	22.50	0.75
.............................................................................TATGAACTTCATACCGTGCTC..........................................................................................................	21	4	105.75	1.25	100.00	4.50	0.00
.............................................................................TAGGCACTTCATACCGTGCTCT.........................................................................................................	22	4	103.50	5.00	12.75	84.75	1.00
.............................................................................TAGGAACTTAATACCGTGCTCTT........................................................................................................	23	4	102.25	2.75	57.00	42.25	0.25
......................................AGCGAGCTATAGAGTTCCTACG................................................................................................................................................	22	4	102.00	38.25	50.50	12.00	1.25
........................................CGAGGTATAGAGTTCCTACG................................................................................................................................................	20	4	101.50	49.25	47.00	5.00	0.25
.............................................................................TAGGAACTTCACACCGTGCTCT.........................................................................................................	22	4	99.50	19.00	15.50	64.75	0.25
......................................AGCGAGGTATAGAGGTCCTACG................................................................................................................................................	22	4	97.50	8.00	13.25	74.00	2.25
......................................AGCCAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	96.75	47.00	37.00	11.50	1.25
.............................................................................TAGGAACTTCATACCGTGCTCTA........................................................................................................	23	4	95.00	7.25	46.00	41.25	0.50
......................................AGCGAGGTATTGAGTTCCTACG................................................................................................................................................	22	4	94.50	40.25	46.50	7.50	0.25
.............................................................................TAGGTACTTCATACCGTGCTCT.........................................................................................................	22	4	92.50	1.25	8.25	83.00	0.00
.......................................GAGAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	92.00	54.50	31.75	5.75	0.00
......................................AGCGAGGTCTAGAGTTCCTACG................................................................................................................................................	22	4	89.75	39.75	38.00	11.75	0.25

dp4

AGAAGATGTGTGTATTTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAGACAACGAAA----------------------------------------------------------------------------------	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
.............................................................................TAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	31775.25	3108.50	6840.50	20832.50	993.75
......................................AGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	23324.00	17177.50	4402.00	1741.75	2.75
.............................................................................TAGGAACTTCATACCGTGCTC..........................................................................................................	21	4	8409.50	981.50	88.25	6953.25	386.50
.............................................................................TAGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	2775.75	22.75	86.00	2614.75	52.25
.............................................................................TAGGAACTTAATACCGTGCTC..........................................................................................................	21	4	825.25	10.00	2.50	802.75	10.00
.............................................................................TAGGAACTTCATACCGTGCT...........................................................................................................	20	4	723.25	65.50	9.00	578.50	70.25
.......................................GCGAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	655.25	595.75	38.50	21.00	0.00
.............................................................................TAGGAACTTCATACCGTGCTCTT........................................................................................................	23	4	587.75	84.50	34.25	455.25	13.75
......................................AGCGAGGTATAGAGTTCCTAC.................................................................................................................................................	21	4	498.25	423.00	7.75	67.25	0.25
......................................AGCGAGGTATAGAGTTCCTACGT...............................................................................................................................................	23	4	202.00	165.50	2.00	34.50	0.00
.............................................................................TAGGAACTTCATACCGCGCTCT.........................................................................................................	22	4	197.50	3.75	28.25	164.75	0.75
......................................AGCGAGGTATAGAGTTCCTA..................................................................................................................................................	20	4	183.00	139.75	0.50	42.75	0.00
......................................AGCGAGGTATAGAGTTCCT...................................................................................................................................................	19	4	152.25	115.50	1.00	35.25	0.50
.............................................................................TAGGAGCTTCATACCGTGCTCT.........................................................................................................	22	4	140.00	4.50	12.00	123.50	0.00
.............................................................................TAGGAACTTCATACCGTGCTCC.........................................................................................................	22	4	122.50	10.50	9.25	49.75	53.00
.............................................................................TAAGAACTTCATACCGTGCTCT.........................................................................................................	22	4	96.00	0.75	14.25	81.00	0.00
.............................................................................TAGGAACTTAATACCGTGCT...........................................................................................................	20	4	93.50	1.25	0.00	89.50	2.75
.............................................................................TAGGAACTTCATACCGAGCTCT.........................................................................................................	22	4	91.25	0.50	15.50	74.75	0.50
............................................................................CTAGGAACTTCATACCGTGCTCT.........................................................................................................	23	4	84.25	6.50	24.75	52.75	0.25
.............................................................................TAGGAACTTCATACCGTGCTT..........................................................................................................	21	4	80.00	7.00	0.25	67.50	5.25
.............................................................................TAGGAAATTCATACCGTGCTCT.........................................................................................................	22	4	75.25	1.00	35.75	38.50	0.00
......................................AGCGAGGTATAGAGTTCCTACT................................................................................................................................................	22	4	65.00	52.75	8.00	4.25	0.00
.............................................................................TAGGAACTTAATACCGTGCTCTT........................................................................................................	23	4	60.00	1.25	0.25	58.25	0.25
.............................................................................TAGGAACTTCATACCGCGCTC..........................................................................................................	21	4	57.50	0.50	1.00	56.00	0.00
.............................................................................TACGAACTTCATACCGTGCTCT.........................................................................................................	22	4	56.75	1.50	2.25	52.00	1.00
.............................................................................TAGGGACTTCATACCGTGCTCT.........................................................................................................	22	4	56.50	1.75	22.75	31.75	0.25
.............................................................................TAGCAACTTCATACCGTGCTCT.........................................................................................................	22	4	55.75	1.75	8.25	45.25	0.50
.............................................................................TAGGAACTTCATACAGTGCTCT.........................................................................................................	22	4	55.25	0.75	19.50	35.00	0.00
......................................AGCGAGGGATAGAGTTCCTACG................................................................................................................................................	22	4	53.25	2.75	39.25	11.25	0.00
.............................................................................TAGGAACTTCATACCGGGCTCT.........................................................................................................	22	4	49.50	1.25	17.75	29.50	1.00
.............................................................................TAGGTACTTCATACCGTGCTCT.........................................................................................................	22	4	47.50	0.25	28.00	19.25	0.00
.............................................................................TAGGAACTTCATACCGTGCTCTTT.......................................................................................................	24	4	47.50	14.25	2.50	28.75	2.00
.............................................................................TAGGAACTTCGTACCGTGCTCT.........................................................................................................	22	4	46.25	1.00	12.25	33.00	0.00
.............................................................................TAGGAACTTCAGACCGTGCTCT.........................................................................................................	22	4	44.50	0.50	10.50	33.25	0.25
......................................AGCGAGGTATAGAGTTCCTACA................................................................................................................................................	22	4	44.50	35.00	4.00	5.50	0.00
.............................................................................TAGGAACGTCATACCGTGCTCT.........................................................................................................	22	4	42.75	0.00	10.25	32.50	0.00
.............................................................................TAGGAACTTCATACCGTGCCCT.........................................................................................................	22	4	41.50	4.75	9.50	26.75	0.50
.............................................................................TAGGAACTTCACACCGTGCTCT.........................................................................................................	22	4	40.50	1.50	6.00	32.00	1.00
......................................AGCGAGGCATAGAGTTCCTACG................................................................................................................................................	22	4	40.50	18.00	15.25	7.25	0.00
.............................................................................TAGGAACTTCATACCATGCTCT.........................................................................................................	22	4	40.25	1.50	9.75	28.25	0.75
......................................AGCGAGGTATAGAGCTCCTACG................................................................................................................................................	22	4	38.75	12.75	19.25	6.75	0.00
.............................................................................TAGGAACTTCATAACGTGCTCT.........................................................................................................	22	4	38.25	0.25	14.50	23.25	0.25
.............................................................................TAGGAACTTCATACTGTGCTCT.........................................................................................................	22	4	37.50	2.00	7.50	27.75	0.25
.............................................................................TAGGAACTTCATACCGTGCTAT.........................................................................................................	22	4	36.75	1.25	15.00	20.25	0.25
.............................................................................TAGGCACTTCATACCGTGCTCT.........................................................................................................	22	4	36.25	2.50	13.50	20.25	0.00
......................................AGAGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	35.75	3.75	23.75	8.25	0.00
.............................................................................TAGGAACTTCATACCGTGATCT.........................................................................................................	22	4	35.75	1.75	13.75	20.25	0.00
.............................................................................TATGAACTTCATACCGTGCTCT.........................................................................................................	22	4	35.25	2.00	3.25	28.50	1.50
......................................AGCGAGGTATAGAGTTCCTCCG................................................................................................................................................	22	4	35.25	18.75	12.25	4.25	0.00
......................................AGCGAGGTATAGAGTTCCTAAG................................................................................................................................................	22	4	35.25	12.75	20.00	2.50	0.00
.............................................................................TAGGAACTTCATACCGTCCTCT.........................................................................................................	22	4	34.75	1.25	6.50	27.00	0.00
.............................................................................TAGGAACTTCATACCGTGCTCTA........................................................................................................	23	4	34.25	3.75	1.00	28.00	1.50
......................................AGCGAGGTATAGAGTTCCTACC................................................................................................................................................	22	4	34.25	23.50	6.25	4.50	0.00
.............................................................................TGGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	33.00	1.75	6.00	25.00	0.25
......................................AGCGAGGTATAGCGTTCCTACG................................................................................................................................................	22	4	32.00	11.00	17.50	3.50	0.00
.............................................................................TAGGAACTTCATACCTTGCTCT.........................................................................................................	22	4	30.75	4.75	5.50	19.25	1.25
.............................................................................CAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	30.75	1.50	7.75	21.25	0.25
......................................AGCGAGGTATAGAGTTCCTACGTT..............................................................................................................................................	24	4	30.25	28.00	0.00	2.25	0.00
.............................................................................TAGGAACTTCATACCGTTCTCT.........................................................................................................	22	4	29.25	2.25	8.75	18.00	0.25
......................................AGCGAGGTATAGAGTTACTACG................................................................................................................................................	22	4	29.25	3.50	21.50	4.25	0.00
......................................AGCGAGGTATAGAGGTCCTACG................................................................................................................................................	22	4	29.25	0.50	26.00	2.75	0.00
.............................................................................TAGGAACTTCCTACCGTGCTCT.........................................................................................................	22	4	28.75	0.75	13.75	14.25	0.00
......................................AGCGGGGTATAGAGTTCCTACG................................................................................................................................................	22	4	28.50	15.75	9.25	3.50	0.00
.............................................................................TAGGAACTTCATATCGTGCTCT.........................................................................................................	22	4	27.25	0.75	15.00	11.50	0.00
.............................................................................TAGGAACCTCATACCGTGCTCT.........................................................................................................	22	4	27.00	3.00	6.75	17.25	0.00
.............................................................................TAGGAACTCCATACCGTGCTCT.........................................................................................................	22	4	27.00	3.50	5.75	17.75	0.00
.......................................GCGAGGTATAGAGTTCCTAC.................................................................................................................................................	20	4	27.00	25.50	0.00	1.50	0.00
.............................................................................TAGGAACTTCATACCGAGCTC..........................................................................................................	21	4	27.00	0.00	0.25	26.50	0.25
.............................................................................TAGGAACTTCATACCGTGCGCT.........................................................................................................	22	4	26.75	0.25	6.75	19.75	0.00
.............................................................................TAGGAACTTCATACCCTGCTCT.........................................................................................................	22	4	26.50	1.25	4.50	20.25	0.50
.............................................................................TAAGAACTTCATACCGTGCTC..........................................................................................................	21	4	26.00	0.00	0.00	26.00	0.00
......................................AGCGAGGTGTAGAGTTCCTACG................................................................................................................................................	22	4	25.25	15.25	8.25	1.75	0.00
.............................................................................TAGGAACTTCATGCCGTGCTCT.........................................................................................................	22	4	24.50	1.50	6.00	13.00	4.00
......................................AGCGAGGTATAGAGTTCCCACG................................................................................................................................................	22	4	23.75	16.00	5.75	2.00	0.00
......................................AGCGAGGTATAGAGTCCCTACG................................................................................................................................................	22	4	23.00	14.50	5.00	3.50	0.00
.............................................................................TAGGAATTTCATACCGTGCTCT.........................................................................................................	22	4	22.75	0.50	8.75	13.50	0.00
.............................................................................TAGGAACTTAATACCGCGCTCT.........................................................................................................	22	4	22.00	0.25	0.75	21.00	0.00
.............................................................................TAGGAACTTTATACCGTGCTCT.........................................................................................................	22	4	22.00	1.75	7.75	12.25	0.25
........................................CGAGGTATAGAGTTCCTACG................................................................................................................................................	20	4	21.75	21.00	0.25	0.50	0.00
......................................AGCGCGGTATAGAGTTCCTACG................................................................................................................................................	22	4	21.50	8.75	9.00	3.75	0.00
.............................................................................TAGGAACTTCATACCGTGCTCG.........................................................................................................	22	4	21.25	1.50	4.00	7.50	8.25
......................................AGCGAGGTATAGAGTTCCTATG................................................................................................................................................	22	4	21.00	9.50	9.25	2.25	0.00
......................................AGCGAGGTATAGGGTTCCTACG................................................................................................................................................	22	4	21.00	11.00	8.50	1.50	0.00
.............................................................................TAGAAACTTCATACCGTGCTCT.........................................................................................................	22	4	20.50	1.50	7.25	11.25	0.50
.............................................................................GAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	20.00	0.75	4.50	14.50	0.25
.............................................................................TAGGAACTTCATACCGTACTCT.........................................................................................................	22	4	19.75	0.50	4.50	13.50	1.25
......................................AGCGAGGTATAGAGATCCTACG................................................................................................................................................	22	4	19.75	1.75	15.00	3.00	0.00
......................................AGCGAGGTATAGAGTTCCGACG................................................................................................................................................	22	4	19.25	1.25	14.75	3.25	0.00
.............................................................................TAGGAACTTCATCCCGTGCTCT.........................................................................................................	22	4	19.25	1.25	7.00	10.75	0.25
.............................................................................TAGGAACTTCATACCGTGCTCA.........................................................................................................	22	4	19.00	4.00	0.75	14.00	0.25
......................................AGCGAGGTATAGAGTTCATACG................................................................................................................................................	22	4	19.00	5.00	12.50	1.50	0.00
......................................GGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	18.75	12.75	5.00	1.00	0.00
......................................AGCGAGGTATGGAGTTCCTACG................................................................................................................................................	22	4	18.25	12.25	4.50	1.50	0.00
.............................................................................AAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	18.00	0.50	4.25	12.75	0.50
.............................................................................TACGAACTTCATACCGTGCTC..........................................................................................................	21	4	18.00	1.00	0.00	16.75	0.25
............................................................................CTAGGAACTTCATACCGTGCTC..........................................................................................................	22	4	18.00	1.25	0.25	16.00	0.50
......................................AGCGAGGTATACAGTTCCTACG................................................................................................................................................	22	4	17.50	9.75	5.50	2.25	0.00
.............................................................................TAGGAACTTCATACCGTGCTTT.........................................................................................................	22	4	16.00	1.50	5.00	9.50	0.00
.............................................................................TAGGAACTTCATACCGTGTTCT.........................................................................................................	22	4	16.00	0.75	5.00	10.25	0.00
......................................AGCGAGGTATAGAGTTCCTGCG................................................................................................................................................	22	4	16.00	6.25	8.25	1.50	0.00
.............................................................................TAGGAACTTAATACCGAGCTCT.........................................................................................................	22	4	15.75	0.00	0.50	15.25	0.00

droPer1

AGAAGATGTGTGTATTTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAGACAACGAAA----------------------------------------------------------------------------------	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
.............................................................................TAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	45662.50	2106.50	956.50	18678.50	21559.75	2361.25
......................................AGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	26083.50	7608.75	730.25	1961.75	15781.75	1.00
.............................................................................TAGGAACTTCATACCGTGCTC..........................................................................................................	21	4	17816.00	329.25	52.00	6034.75	11166.00	234.00
.............................................................................TAGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	5647.50	18.25	13.00	2454.25	2908.25	253.75
.............................................................................TAGGAACTTAATACCGTGCTC..........................................................................................................	21	4	2202.00	5.00	0.50	697.50	1490.25	8.75
.............................................................................TAGGAACTTCATACCGTGCT...........................................................................................................	20	4	1008.50	29.50	2.25	367.50	593.25	16.00
.............................................................................TAGGAACTTCATACCGTGCTCTT........................................................................................................	23	4	841.50	25.75	11.25	327.75	471.00	5.75
......................................AGCGAGGTATAGAGTTCCTAC.................................................................................................................................................	21	4	641.00	133.25	0.00	46.75	460.50	0.50
.......................................GCGAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	495.75	336.25	5.75	18.75	135.00	0.00
......................................AGCGAGGTATAGAGTTCCT...................................................................................................................................................	19	4	455.25	197.50	0.25	22.75	234.75	0.00
......................................AGCGAGGGATAGAGTTCCTACG................................................................................................................................................	22	4	446.00	20.25	1.50	9.25	415.00	0.00
.............................................................................TAGGAACTTCATACCGCGCTCT.........................................................................................................	22	4	405.50	1.50	1.25	121.00	280.50	1.25
.............................................................................TAGGAGCTTCATACCGTGCTCT.........................................................................................................	22	4	389.75	2.25	1.25	186.75	199.50	0.00
......................................AGCGAGGTATAGAGTTCCTACGT...............................................................................................................................................	23	4	322.00	49.75	0.50	28.75	243.00	0.00
.............................................................................TAGGAACTTCATACCGTGCTCC.........................................................................................................	22	4	309.75	2.75	0.75	37.00	72.50	196.75
......................................AGCGAGGTATAGAGTTCCTA..................................................................................................................................................	20	4	267.75	33.75	0.00	27.00	207.00	0.00
.............................................................................TAGGAACTTCATACCGCGCTC..........................................................................................................	21	4	197.75	0.00	0.25	38.25	159.25	0.00
......................................AGCGAGGCATAGAGTTCCTACG................................................................................................................................................	22	4	185.25	12.00	1.75	6.75	164.75	0.00
.............................................................................TAGGAACTTCATACCGAGCTCT.........................................................................................................	22	4	161.50	3.25	1.00	43.50	113.50	0.25
.............................................................................TAGGGACTTCATACCGTGCTCT.........................................................................................................	22	4	158.75	2.25	1.25	20.75	133.00	1.50
.............................................................................TAGGAACGTCATACCGTGCTCT.........................................................................................................	22	4	153.75	0.25	0.00	13.75	139.75	0.00
.............................................................................TAGCAACTTCATACCGTGCTCT.........................................................................................................	22	4	149.50	0.50	0.50	32.75	115.75	0.00
.............................................................................TAGGAACTTAATACCGTGCT...........................................................................................................	20	4	138.75	0.00	0.00	54.50	83.75	0.50
.............................................................................TAGGAAATTCATACCGTGCTCT.........................................................................................................	22	4	124.00	0.25	1.75	28.25	93.25	0.50
......................................AGCGAGGAATAGAGTTCCTACG................................................................................................................................................	22	4	119.25	9.75	0.25	4.25	105.00	0.00
......................................AGCGAGGTATAGAGCTCCTACG................................................................................................................................................	22	4	105.75	4.25	3.50	6.75	91.25	0.00
.............................................................................TAGGAACTTAATACCGTGCTCTT........................................................................................................	23	4	105.50	0.25	0.00	43.00	61.50	0.75
............................................................................CTAGGAACTTCATACCGTGCTCT.........................................................................................................	23	4	105.00	2.25	2.00	47.25	53.50	0.00
.............................................................................TAGGAACTTCATACAGTGCTCT.........................................................................................................	22	4	104.25	0.75	1.50	26.75	73.75	1.50
......................................AGCGAGGTATAGAGTTCCTACT................................................................................................................................................	22	4	100.50	14.00	1.25	3.00	82.25	0.00
.............................................................................TAGGAACTTCATACCGTGCTT..........................................................................................................	21	4	95.50	2.50	0.00	25.75	67.00	0.25
.............................................................................TAGGAACTTCAGACCGTGCTCT.........................................................................................................	22	4	95.00	0.25	0.25	19.25	75.00	0.25
.............................................................................TAGGAACTTCATACCGGGCTCT.........................................................................................................	22	4	92.25	0.75	3.75	16.25	70.00	1.50
......................................AGCGGGGTATAGAGTTCCTACG................................................................................................................................................	22	4	90.25	6.75	0.75	1.75	81.00	0.00
.............................................................................TAGGAACTTCATACCGTGCTCG.........................................................................................................	22	4	88.25	0.50	0.50	6.25	19.75	61.25
......................................AGAGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	84.75	1.75	2.50	4.50	76.00	0.00
.............................................................................TAGGAACTTCATACCGTCCTCT.........................................................................................................	22	4	84.00	1.25	0.50	25.25	56.75	0.25
.............................................................................TAAGAACTTCATACCGTGCTCT.........................................................................................................	22	4	83.50	1.50	0.75	38.50	42.25	0.50
.............................................................................TAGGAACTTCATACCGAGCTC..........................................................................................................	21	4	81.25	0.25	0.00	18.50	62.50	0.00
.............................................................................TAGGAACGTCATACCGTGCTC..........................................................................................................	21	4	78.50	0.00	0.00	5.50	73.00	0.00
......................................AGCGAGGTATAGAGTTACTACG................................................................................................................................................	22	4	77.00	3.75	0.75	2.75	69.75	0.00
.............................................................................TAGGAACTGCATACCGTGCTCT.........................................................................................................	22	4	75.25	0.25	0.50	6.00	68.50	0.00
......................................AGCGCGGTATAGAGTTCCTACG................................................................................................................................................	22	4	74.00	2.50	0.00	3.00	68.50	0.00
.............................................................................TAGGAACTTCACACCGTGCTCT.........................................................................................................	22	4	73.75	1.75	1.50	20.00	50.00	0.50
......................................AGCGAGGTATAGAGTTCCTACA................................................................................................................................................	22	4	73.50	8.75	1.25	7.75	55.75	0.00
.............................................................................TAGGGACTTCATACCGTGCTC..........................................................................................................	21	4	72.00	1.25	0.00	6.50	63.75	0.50
.............................................................................TAGGTACTTCATACCGTGCTCT.........................................................................................................	22	4	71.75	0.75	3.00	15.75	52.25	0.00
......................................AGCGAGGTATAGAGTTCCTACC................................................................................................................................................	22	4	70.75	4.25	0.00	6.25	60.25	0.00
.............................................................................TAGCAACTTCATACCGTGCTC..........................................................................................................	21	4	70.75	0.00	0.00	8.00	62.75	0.00
.............................................................................TGGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	68.75	0.50	0.75	20.25	45.25	2.00
.............................................................................TAGGCACTTCATACCGTGCTCT.........................................................................................................	22	4	68.50	0.75	0.50	10.25	56.50	0.50
......................................AGCGAGGTATAGAGGTCCTACG................................................................................................................................................	22	4	68.50	1.50	2.50	3.00	61.50	0.00
.............................................................................TAGGAACTTCATAACGTGCTCT.........................................................................................................	22	4	66.75	0.25	1.50	17.25	47.75	0.00
.............................................................................TAGGAACTTCGTACCGTGCTCT.........................................................................................................	22	4	66.50	2.50	2.00	23.75	38.00	0.25
......................................AGCGAGGTATAGAGTTCCGACG................................................................................................................................................	22	4	66.50	1.00	1.75	1.25	62.50	0.00
.............................................................................TAGGAACTTCATACCATGCTCT.........................................................................................................	22	4	65.50	1.25	1.75	25.75	35.00	1.75
.............................................................................TAGGAGCTTCATACCGTGCTC..........................................................................................................	21	4	65.25	0.25	0.00	30.50	34.50	0.00
.............................................................................TAGGAAATTCATACCGTGCTC..........................................................................................................	21	4	64.25	0.00	0.25	11.00	53.00	0.00
.............................................................................TAGGACCTTCATACCGTGCTCT.........................................................................................................	22	4	64.00	0.25	0.00	39.75	24.00	0.00
.............................................................................TAGGAACTTCATACCTTGCTCT.........................................................................................................	22	4	63.50	3.25	0.75	20.25	32.75	6.50
.............................................................................CAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	63.00	1.50	0.75	15.00	39.25	6.50
.............................................................................TAGGAACTTCATACCGTGCTCTA........................................................................................................	23	4	62.75	0.75	0.25	25.25	36.50	0.00
.............................................................................TAGGAACTTCATACCCTGCTCT.........................................................................................................	22	4	60.75	0.25	1.25	13.00	44.50	1.75
......................................AGCGAGGTATAGAGTTCCTATG................................................................................................................................................	22	4	59.00	3.00	1.50	2.25	52.25	0.00
.............................................................................TAGGAACTTCATACCGTGATCT.........................................................................................................	22	4	58.75	1.50	0.25	29.50	27.50	0.00
.............................................................................TAGGAACTTCATACTGTGCTCT.........................................................................................................	22	4	58.25	1.50	1.50	25.25	29.00	1.00
......................................AGCGAGGTATAGAGTTCCTCCG................................................................................................................................................	22	4	57.00	0.50	1.25	5.50	49.75	0.00
.............................................................................TAGGAACTTCATACCGTGCTAT.........................................................................................................	22	4	55.75	0.50	2.75	32.50	19.75	0.25
.............................................................................TAGGAACTTAATACCGCGCTCT.........................................................................................................	22	4	54.75	0.00	0.25	16.75	37.75	0.00
.............................................................................TAGGAACTTCATACCGTGCGCT.........................................................................................................	22	4	54.50	0.25	0.25	10.00	44.00	0.00
.............................................................................AAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	54.00	1.00	0.00	11.75	39.00	2.25
.............................................................................TAGGAACTTCATACCGTGCCCT.........................................................................................................	22	4	54.00	0.75	0.75	18.50	31.75	2.25
.............................................................................TAGGAACTTCATACCGTTCTCT.........................................................................................................	22	4	52.25	1.50	0.00	18.25	30.50	2.00
.............................................................................TAGGAATTTCATACCGTGCTCT.........................................................................................................	22	4	51.25	1.25	0.50	11.75	37.50	0.25
......................................AGCGAGGTATAGAGTTCATACG................................................................................................................................................	22	4	51.00	2.25	2.00	4.25	42.50	0.00
......................................AGCGAGGTATAGAGATCCTACG................................................................................................................................................	22	4	47.00	0.00	1.50	1.25	44.25	0.00
.............................................................................TAGGAACTTCATACCGTCCTC..........................................................................................................	21	4	47.00	0.25	0.00	9.00	37.75	0.00
.............................................................................TAGGAACCTCATACCGTGCTCT.........................................................................................................	22	4	45.75	1.75	0.50	12.00	30.25	1.25
.............................................................................TAGGAACTTCAGACCGTGCTC..........................................................................................................	21	4	44.50	0.00	0.00	5.25	39.25	0.00
.............................................................................TAGGAACTTCCTACCGTGCTCT.........................................................................................................	22	4	44.25	0.00	2.00	10.75	31.50	0.00
......................................AGCGAGGTATACAGTTCCTACG................................................................................................................................................	22	4	44.00	1.00	0.50	1.75	40.75	0.00
......................................AGCGAGGTATAGCGTTCCTACG................................................................................................................................................	22	4	44.00	0.75	1.00	2.00	40.25	0.00
.............................................................................TAGGAACTTCATACAGTGCTC..........................................................................................................	21	4	44.00	0.25	0.00	9.00	34.75	0.00
......................................AGCGAGGTATAGTGTTCCTACG................................................................................................................................................	22	4	43.75	0.25	2.00	0.75	40.75	0.00
.............................................................................TAGGAACTTCATACCGGGCTC..........................................................................................................	21	4	43.25	0.25	0.00	4.75	38.25	0.00
............................................................................CTAGGAACTTCATACCGTGCTC..........................................................................................................	22	4	42.75	0.75	0.00	16.50	25.50	0.00
.............................................................................TAGGAAGTTCATACCGTGCTCT.........................................................................................................	22	4	42.25	0.00	0.50	4.00	37.75	0.00
.............................................................................TAGGAACTTCATACCGTACTCT.........................................................................................................	22	4	41.25	1.00	0.25	18.75	19.25	2.00
......................................AGCGAGGTATAGAGTCCCTACG................................................................................................................................................	22	4	41.00	3.75	0.75	1.75	34.75	0.00
.............................................................................GAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	40.75	0.25	1.00	9.75	29.25	0.50
.............................................................................TAGGAACTTCATGCCGTGCTCT.........................................................................................................	22	4	40.00	1.00	1.00	10.75	18.00	9.25
.............................................................................TAGGAACTTCATACCGTGCTCTTT.......................................................................................................	24	4	39.50	6.00	0.50	18.25	14.75	0.00
.............................................................................TAGGAACTGCATACCGTGCTC..........................................................................................................	21	4	37.75	0.00	0.00	2.75	35.00	0.00
.............................................................................TAGGATCTTCATACCGTGCTCT.........................................................................................................	22	4	37.75	0.00	0.25	33.00	4.50	0.00
.............................................................................TAGGAACTCCATACCGTGCTCT.........................................................................................................	22	4	37.25	1.75	0.75	13.00	21.50	0.25
......................................AGCGAGGTATAGAGTTCCCACG................................................................................................................................................	22	4	36.75	4.25	0.50	2.00	30.00	0.00
.............................................................................TATGAACTTCATACCGTGCTCT.........................................................................................................	22	4	36.75	3.25	0.00	7.75	19.00	6.75
.............................................................................TAGGAACTTTATACCGTGCTCT.........................................................................................................	22	4	36.75	0.75	0.75	10.25	23.00	2.00
......................................GGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	36.50	16.00	0.00	0.75	19.75	0.00
.............................................................................TAGGAACTTCATACCGTGCTTT.........................................................................................................	22	4	34.75	0.25	0.75	9.50	23.75	0.50
......................................AGCGAGGTATAGAGTTCCTAAG................................................................................................................................................	22	4	34.75	0.25	2.75	6.50	25.25	0.00

droWil1

AAA--ATAT---------GCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTTAATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACGTTACGAAA--ACAGCAA-----------------------CAAGA-------AAA------------------------AA----	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
.............................................................................TAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	256223.75	2263.50	26354.75	58041.00	169564.50
......................................AGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	189070.75	15477.50	15918.25	157579.00	96.00
.............................................................................TAGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	90762.75	25.00	353.50	4170.25	86214.00
.............................................................................TAGGAACTTCATACCGTGCTC..........................................................................................................	21	4	19986.25	229.75	316.25	3998.25	15442.00
.............................................................................TAGGAACTTCATACCGTGCTCC.........................................................................................................	22	4	19550.25	6.75	22.75	111.50	19409.25
.............................................................................TAGGAACTTAATACCGTGCTCC.........................................................................................................	22	4	9629.00	0.00	0.50	8.75	9619.75
.............................................................................TAGGAACTTAATACCGTGCTC..........................................................................................................	21	4	5847.75	5.50	6.00	601.25	5235.00
.............................................................................TAGGAACTTCATACCGTGCT...........................................................................................................	20	4	3955.00	29.75	50.50	260.50	3614.25
.............................................................................TAGGAACTTCATACCGTGCTCG.........................................................................................................	22	4	3249.75	0.75	3.50	5.25	3240.25
.............................................................................TAGGAACTTAATACCGTGCTCG.........................................................................................................	22	4	1630.75	0.00	0.25	0.25	1630.25
......................................AGCGAGGTATAGAGTTCCT...................................................................................................................................................	19	4	1578.00	76.25	12.00	1480.00	9.75
.......................................GCGAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	1549.25	366.75	59.25	1122.25	1.00
.............................................................................TAGGAACTTAATACCGTGCT...........................................................................................................	20	4	1332.75	0.00	0.25	30.00	1302.50
.............................................................................TAGGAACTTCATACCGTGCTCTT........................................................................................................	23	4	916.00	26.25	44.75	337.75	507.25
.............................................................................TAGGAACTTCATACCTTGCTCT.........................................................................................................	22	4	865.00	3.00	49.75	111.50	700.75
.............................................................................TAGGAACTTAATACCTTGCTCT.........................................................................................................	22	4	796.75	0.00	0.75	9.00	787.00
......................................AGCGAGGTATAGAGTTCCTAAG................................................................................................................................................	22	4	752.25	2.00	12.75	737.25	0.25
......................................AGCGAGGTATAGAGTTCATACG................................................................................................................................................	22	4	634.25	1.50	32.50	600.25	0.00
.............................................................................TAGGAACTTCATGCCGTGCTCT.........................................................................................................	22	4	622.00	1.50	13.25	40.25	567.00
......................................AGCGCGGTATAGAGTTCCTACG................................................................................................................................................	22	4	610.50	13.25	69.50	527.75	0.00
......................................AGCGAGGTATAGAGTTCCTAC.................................................................................................................................................	21	4	568.50	140.75	38.25	386.75	2.75
.............................................................................TATGAACTTCATACCGTGCTCT.........................................................................................................	22	4	539.50	0.50	79.75	89.50	369.75
......................................CGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	527.25	4.25	2.25	520.75	0.00
......................................AGCGAGGCATAGAGTTCCTACG................................................................................................................................................	22	4	523.00	31.25	66.25	425.50	0.00
......................................AGCGAGGTATAGAGTTCCTACA................................................................................................................................................	22	4	502.50	17.00	10.25	475.25	0.00
......................................AGCGAGGTATAGAGTTACTACG................................................................................................................................................	22	4	501.00	2.00	19.25	479.75	0.00
......................................AGAGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	450.00	2.50	22.25	425.00	0.25
......................................AGCGAGGTATAAAGTTCCTACG................................................................................................................................................	22	4	400.75	3.25	5.25	392.25	0.00
.............................................................................TAGGAACTTCATACCGTGCC...........................................................................................................	20	4	370.75	0.00	0.75	0.75	369.25
............................................................................CTAGGAACTTCATACCGTGCTCT.........................................................................................................	23	4	338.25	2.25	92.00	200.75	43.25
.............................................................................TAGGAACTTCATACAGTGCTCT.........................................................................................................	22	4	334.00	0.50	46.25	207.25	80.00
.............................................................................TAGGAGCTTCATACCGTGCTCT.........................................................................................................	22	4	322.25	4.50	27.25	200.00	90.50
.............................................................................TAGGAACTTAATACCxTGCTCT.........................................................................................................	21	4	321.75	0.00	0.25	2.50	319.00
.............................................................................TAGGCACTTCATACCGTGCTCT.........................................................................................................	22	4	301.00	1.50	83.50	163.25	52.75
......................................TGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	300.00	2.50	1.25	296.25	0.00
.............................................................................TAGGAACTTAATGCCGTGCTCT.........................................................................................................	22	4	298.50	0.00	0.00	4.25	294.25
.............................................................................TAGGAACTTCATACCGGGCTCT.........................................................................................................	22	4	295.50	4.25	14.00	30.00	247.25
.............................................................................TAGGAACTTCATACCxTGCTCT.........................................................................................................	21	4	289.50	0.50	6.50	20.75	261.75
......................................AGCGAGGTATAGAGCTCCTACG................................................................................................................................................	22	4	286.25	16.75	22.00	247.50	0.00
.............................................................................CAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	284.75	0.75	25.75	191.00	67.25
......................................AGCGAGGAATAGAGTTCCTACG................................................................................................................................................	22	4	281.75	18.75	12.50	250.25	0.25
.............................................................................TAGGAACTTCATACCGTGCCCT.........................................................................................................	22	4	274.00	4.00	23.25	65.75	181.00
.............................................................................TAGGAACTTCATACCGTGCTAT.........................................................................................................	22	4	273.25	0.50	39.25	217.00	16.50
.............................................................................TAGGAACTTCATACCGCGCTCT.........................................................................................................	22	4	271.50	4.00	52.75	98.50	116.25
......................................AGCGAGGTATAGAGTCCCTACG................................................................................................................................................	22	4	269.00	20.00	12.50	236.50	0.00
.............................................................................TAGGAACTTAATACCGTGCTCTT........................................................................................................	23	4	265.50	0.50	1.25	33.75	230.00
.............................................................................TAGGAACTTCATACCGTGATCT.........................................................................................................	22	4	263.25	0.00	36.25	218.25	8.75
......................................AGCGGGGTATAGAGTTCCTACG................................................................................................................................................	22	4	252.00	14.00	19.50	218.50	0.00
......................................AGCAAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	243.50	9.50	11.50	222.00	0.50
......................................AGCGAAGTATAGAGTTCCTACG................................................................................................................................................	22	4	243.00	6.75	6.25	230.00	0.00
.............................................................................TAGGGACTTCATACCGTGCTCT.........................................................................................................	22	4	242.25	1.75	30.50	80.00	130.00
.............................................................................TAGGAACTTCATACCATGCTCT.........................................................................................................	22	4	241.75	2.00	34.50	109.75	95.50
.............................................................................TACGAACTTCATACCGTGCTCT.........................................................................................................	22	4	241.25	1.25	14.50	66.00	159.50
......................................AGCGAGGTATAGAGTTCCTACT................................................................................................................................................	22	4	234.50	25.75	29.50	178.75	0.50
.............................................................................TAGGAACTTCATACTGTGCTCT.........................................................................................................	22	4	231.25	1.25	25.25	99.00	105.75
......................................AGCGAGGTATAGAGTTCCCACG................................................................................................................................................	22	4	221.50	12.50	11.25	197.75	0.00
......................................AGCGAGGTATAGAATTCCTACG................................................................................................................................................	22	4	220.75	4.00	4.50	212.00	0.25
.............................................................................TAGGAACTTCATACCGTGC............................................................................................................	19	4	220.00	0.75	1.50	27.25	190.50
......................................AGCGAGGTACAGAGTTCCTACG................................................................................................................................................	22	4	218.75	15.00	11.00	192.75	0.00
......................................ATCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	214.25	11.50	36.50	165.00	1.25
.............................................................................TATGAACTTAATACCGTGCTCT.........................................................................................................	22	4	212.00	0.00	1.75	6.25	204.00
......................................AACGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	207.50	8.75	6.00	192.75	0.00
......................................AGCGAGGTATAGAGTTCCTACC................................................................................................................................................	22	4	206.75	21.75	14.00	170.75	0.25
.............................................................................TGGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	202.25	1.75	13.25	59.75	127.50
.............................................................................TAGTAACTTCATACCGTGCTCT.........................................................................................................	22	4	201.75	2.25	43.50	67.00	89.00
......................................GGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	197.00	10.50	11.25	175.25	0.00
......................................AGCGAGGTATGGAGTTCCTACG................................................................................................................................................	22	4	195.50	12.75	12.25	170.50	0.00
......................................AGCGAGGTATAGAGTTCCTCCG................................................................................................................................................	22	4	194.00	11.25	13.75	169.00	0.00
.............................................................................TAGGAACTTCATACCGTTCTCT.........................................................................................................	22	4	188.50	2.75	43.75	63.75	78.25
......................................AGCGATGTATAGAGTTCCTACG................................................................................................................................................	22	4	186.50	4.50	31.50	150.50	0.00
...............................................................................TGAACTTCATACCGTGCTCT.........................................................................................................	20	4	185.00	0.00	13.25	32.75	139.00
.............................................................................TAGGAACCTCATACCGTGCTCT.........................................................................................................	22	4	184.50	1.50	31.25	85.25	66.50
......................................AGCGAGGTGTAGAGTTCCTACG................................................................................................................................................	22	4	180.00	12.75	14.00	152.75	0.50
.............................................................................TAGGAACTTCATACCGTACTCT.........................................................................................................	22	4	178.00	1.75	14.50	96.50	65.25
......................................AGCGAGGTATATAGTTCCTACG................................................................................................................................................	22	4	176.00	5.75	30.50	139.75	0.00
.............................................................................TAGGAACTTCATAACGTGCTCT.........................................................................................................	22	4	173.50	0.25	13.00	151.00	9.25
......................................AGCGAGGTATCGAGTTCCTACG................................................................................................................................................	22	4	171.75	5.50	7.00	159.25	0.00
......................................AGCTAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	171.50	6.25	38.00	127.25	0.00
......................................AGCGAGGTATAGCGTTCCTACG................................................................................................................................................	22	4	171.00	22.75	15.00	133.25	0.00
.............................................................................TAGGAACTTCGTACCGTGCTCT.........................................................................................................	22	4	168.75	3.00	21.25	67.75	76.75
......................................AGCGAGGTATAGGGTTCCTACG................................................................................................................................................	22	4	168.75	11.75	13.50	143.50	0.00
.............................................................................TAGGAACTTCACACCGTGCTCT.........................................................................................................	22	4	168.00	2.75	25.50	77.50	62.25
.............................................................................TAGGAACTTCATCCCGTGCTCT.........................................................................................................	22	4	164.50	0.75	7.00	29.50	127.25
......................................AGTGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	162.25	10.25	11.50	140.50	0.00
......................................ACCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	152.75	12.75	9.00	131.00	0.00
......................................AGCGAGGGATAGAGTTCCTACG................................................................................................................................................	22	4	151.00	9.75	13.75	125.75	1.75
.............................................................................TAGAAACTTCATACCGTGCTCT.........................................................................................................	22	4	150.75	1.00	13.00	100.50	36.25
......................................AGCGAGGTATAGAGTTTCTACG................................................................................................................................................	22	4	149.75	7.00	5.75	137.00	0.00
......................................AGCGAGGTATAGAGTTCTTACG................................................................................................................................................	22	4	149.50	4.25	3.50	141.50	0.25
.............................................................................TAGGAACTTAATACCGGGCTCT.........................................................................................................	22	4	148.50	0.00	0.00	2.50	146.00
.............................................................................TAGGAACTCCATACCGTGCTCT.........................................................................................................	22	4	147.25	1.50	22.75	77.25	45.75
.............................................................................TAGGAACTTTATACCGTGCTCT.........................................................................................................	22	4	147.25	2.00	11.00	42.75	91.50
......................................AGCGAGGTATAGAGTTCCTA..................................................................................................................................................	20	4	147.00	44.50	5.75	95.50	1.25
......................................AGCGAGGTATAGATTTCCTACG................................................................................................................................................	22	4	146.50	7.00	14.00	125.00	0.50
......................................AGCGAGGxxTAGAGTTCCTACG................................................................................................................................................	20	4	142.50	6.75	13.00	122.75	0.00
......................................AGCGAGGTATAGAGATCCTACG................................................................................................................................................	22	4	142.50	0.75	3.25	138.50	0.00
..............................................................................TAGAACTTCATACCGTGCTCT.........................................................................................................	21	2	283.50	2.50	25.00	72.50	183.50
......................................AGCGAGGTATAGACTTCCTACG................................................................................................................................................	22	4	141.75	7.00	7.50	127.00	0.25
......................................AGCGAGGTATAGAGTTCCTATG................................................................................................................................................	22	4	141.50	6.75	12.00	122.75	0.00
.............................................................................TAGGAACTTCATACCCTGCTCT.........................................................................................................	22	4	139.00	1.25	15.00	46.25	76.50
.............................................................................TAGGAACTTAATACCGTGCC...........................................................................................................	20	4	138.75	0.00	0.00	0.00	138.75

droVir3

TGAAAATAT---------GCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCAATTTATATACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACGAAGTGAAA--CGC-----------------------------GCA----------------------------------GCACA-	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
.............................................................................TAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	95410.00	5531.75	35603.75	1578.00	8449.25	44247.25
......................................AGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	53047.25	39521.50	10040.00	3450.00	11.25	24.50
.............................................................................TAGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	20741.75	24.50	4081.25	15.00	303.25	16317.75
.............................................................................TAGGAACTTCATACCGTGCTC..........................................................................................................	21	4	14550.00	592.00	6657.50	14.75	1245.50	6040.25
.............................................................................TAGGAACTTCATACCGTGCTCC.........................................................................................................	22	4	7797.25	5.50	63.00	1.25	933.50	6794.00
.............................................................................TAGGAACTTAATACCGTGCTC..........................................................................................................	21	4	2723.50	2.50	907.50	0.00	26.75	1786.75
.............................................................................TAGGAACTTCATACCGTGCT...........................................................................................................	20	4	2546.25	64.00	556.00	0.75	282.50	1643.00
.............................................................................TAGGAACTTAATACCGTGCTCC.........................................................................................................	22	4	2486.25	0.00	5.50	0.00	35.00	2445.75
.......................................GCGAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	2055.75	1702.00	336.00	17.00	0.00	0.75
.............................................................................TAGGAACTTCATACCGTGCTCG.........................................................................................................	22	4	1913.50	5.75	26.75	0.50	340.25	1540.25
.............................................................................TAGGAACTTCATACCGTGCTCTT........................................................................................................	23	4	1370.25	190.00	775.00	10.75	93.75	300.75
......................................AGCGAGGTATAGAGTTCCTAC.................................................................................................................................................	21	4	660.00	496.50	155.25	6.75	0.50	1.00
......................................AGCGAGGTATAGAGTTCCT...................................................................................................................................................	19	4	626.75	314.50	295.00	1.00	2.50	13.75
.............................................................................TAGGAACTTAATACCGTGCT...........................................................................................................	20	4	591.75	0.00	64.00	0.00	6.75	521.00
.............................................................................TAGGAACTTAATACCGTGCTCG.........................................................................................................	22	4	548.25	0.00	5.25	0.00	11.75	531.25
.............................................................................TAGGAAATTCATACCGTGCTCT.........................................................................................................	22	4	451.25	3.75	429.50	2.00	2.75	13.25
......................................AGCGAGGTATAGAGTTCCTACT................................................................................................................................................	22	4	401.00	317.00	41.00	42.50	0.25	0.25
.............................................................................TAGGAACTTCATACCGCGCTCT.........................................................................................................	22	4	332.50	8.25	281.50	12.00	5.50	25.25
......................................AGCGAGGGATAGAGTTCCTACG................................................................................................................................................	22	4	279.50	106.00	152.00	21.50	0.00	0.00
.............................................................................TAGGAACTTCATACCGTGCC...........................................................................................................	20	4	259.75	0.25	4.25	0.00	26.75	228.50
......................................AGCGAGGTATAGAGTTCCTACGT...............................................................................................................................................	23	4	227.25	153.75	71.75	1.50	0.00	0.25
......................................AGCGAGGTATAGAGTTCCTA..................................................................................................................................................	20	4	213.25	141.50	70.50	0.50	0.50	0.25
......................................AGCGAGGCATAGAGTTCCTACG................................................................................................................................................	22	4	180.75	106.25	57.75	16.75	0.00	0.00
.............................................................................TAGGAACTTCATACCTTGCTCT.........................................................................................................	22	4	176.00	8.50	46.75	9.75	22.25	88.75
.............................................................................TAGGAACTTAATACCGTGCTCTT........................................................................................................	23	4	161.25	0.50	63.00	0.00	2.50	95.25
.............................................................................TAGGAACTTCATACCGTGCCCT.........................................................................................................	22	4	155.25	6.25	74.00	2.50	14.25	58.25
.............................................................................TAGGAGCTTCATACCGTGCTCT.........................................................................................................	22	4	153.75	7.00	114.25	3.00	6.75	22.75
.............................................................................TAGGAACTTCATACCGAGCTCT.........................................................................................................	22	4	152.00	10.75	133.75	3.50	0.50	3.50
.............................................................................TAGGAACTTCATACCGTTCTCT.........................................................................................................	22	4	151.00	4.00	109.75	19.50	3.50	14.25
.............................................................................TAGCAACTTCATACCGTGCTCT.........................................................................................................	22	4	145.75	2.75	132.50	5.00	1.00	4.50
.............................................................................TAGGAACTTCATACCGGGCTCT.........................................................................................................	22	4	138.25	7.25	94.50	5.75	5.50	25.25
.............................................................................TAGGAACGTCATACCGTGCTCT.........................................................................................................	22	4	134.00	0.00	130.75	0.75	0.50	2.00
......................................AGCGAGGTATAGAGCTCCTACG................................................................................................................................................	22	4	130.75	66.00	48.75	16.00	0.00	0.00
............................................................................CTAGGAACTTCATACCGTGCTCT.........................................................................................................	23	4	120.25	7.50	98.25	3.75	0.75	10.00
.............................................................................TAGGAACTTCATACCGTGCTT..........................................................................................................	21	4	119.25	7.00	54.50	0.00	11.50	46.25
......................................AGCGAGGTATAGAGTTCCTACA................................................................................................................................................	22	4	117.50	87.75	22.75	7.00	0.00	0.00
.............................................................................TAGGAACTTCATACCGTGC............................................................................................................	19	4	116.25	0.25	9.00	0.00	11.25	95.75
.............................................................................TGGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	115.50	3.25	66.25	1.00	10.25	34.75
.............................................................................TAGGAACTTCATACAGTGCTCT.........................................................................................................	22	4	112.00	8.00	82.50	1.00	3.25	17.25
.............................................................................CAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	108.25	4.00	79.75	1.25	5.50	17.75
.............................................................................TAGGAACTTCATACCGTGCG...........................................................................................................	20	4	104.50	0.00	1.00	0.00	14.50	89.00
.............................................................................TAGGGACTTCATACCGTGCTCT.........................................................................................................	22	4	103.75	6.00	69.00	6.00	5.00	17.75
.............................................................................TAGGAACTTCATAACGTGCTCT.........................................................................................................	22	4	102.00	3.75	87.25	0.75	0.75	9.50
.............................................................................TAGGAACTTCATACTGTGCTCT.........................................................................................................	22	4	99.25	3.00	63.50	2.25	3.75	26.75
.............................................................................TAGGAACTTCATACCGTGCTCTTT.......................................................................................................	24	4	98.00	24.00	55.50	0.50	10.25	7.75
.............................................................................TAGGAACTTCAGACCGTGCTCT.........................................................................................................	22	4	92.00	1.00	88.25	1.50	0.25	1.00
......................................AGCGAGGTATAGAGTTCCTACC................................................................................................................................................	22	4	89.25	47.25	27.50	14.50	0.00	0.00
......................................AGCGAGGAATAGAGTTCCTACG................................................................................................................................................	22	4	89.00	40.25	44.00	4.75	0.00	0.00
.............................................................................TAGGACCTTCATACCGTGCTCT.........................................................................................................	22	4	88.75	0.50	85.00	0.75	0.50	2.00
......................................AGCGAGGTATAGAGTTCCTCCG................................................................................................................................................	22	4	87.50	15.50	44.25	27.75	0.00	0.00
.............................................................................TATGAACTTCATACCGTGCTCT.........................................................................................................	22	4	84.75	3.00	21.25	8.00	19.50	33.00
.............................................................................TAGGAACTTCATACCGTGCTCTA........................................................................................................	23	4	84.00	14.25	53.50	0.50	5.25	10.50
.............................................................................TAGGAACTCCATACCGTGCTCT.........................................................................................................	22	4	82.50	2.50	59.50	2.25	3.50	14.75
.............................................................................TAGGAAATTCATACCGTGCTC..........................................................................................................	21	4	82.50	0.00	80.00	0.00	0.25	2.25
......................................AGCGAGGTATAGAGATCCTACG................................................................................................................................................	22	4	82.50	48.75	26.75	7.00	0.00	0.00
.............................................................................TAGGAACTTCATACCATGCTCT.........................................................................................................	22	4	81.25	6.50	40.25	3.00	5.00	26.50
......................................AGCGAGGTATAGAGTTACTACG................................................................................................................................................	22	4	79.75	38.75	34.00	7.00	0.00	0.00
.............................................................................TAGGAACTTCGTACCGTGCTCT.........................................................................................................	22	4	78.50	4.75	46.75	2.75	1.50	22.75
.............................................................................TAGGAACTTCATACCGTCCTCT.........................................................................................................	22	4	78.50	5.50	61.00	2.75	1.50	7.75
.............................................................................TAGGAACTTCACACCGTGCTCT.........................................................................................................	22	4	76.75	4.50	45.50	2.00	2.75	22.00
.............................................................................TAGGTACTTCATACCGTGCTCT.........................................................................................................	22	4	75.50	1.00	70.00	3.25	0.50	0.75
.............................................................................TAGGAACTTAATACCGTGCC...........................................................................................................	20	4	74.25	0.00	1.00	0.00	1.50	71.75
.............................................................................TAGGAACTTAATACCTTGCTCT.........................................................................................................	22	4	73.75	0.00	6.00	0.00	3.25	64.50
.............................................................................TAGGAACTTCATGCCGTGCTCT.........................................................................................................	22	4	73.50	3.75	28.25	1.75	6.00	33.75
......................................AGCGAGGTATAGAGTTCATACG................................................................................................................................................	22	4	71.75	56.75	13.50	1.50	0.00	0.00
......................................AGCGAGGTATAGAGGTCCTACG................................................................................................................................................	22	4	71.50	20.25	27.75	23.50	0.00	0.00
.............................................................................TAGGAACTTGATACCGTGCTCT.........................................................................................................	22	4	69.00	0.50	61.50	0.25	0.50	6.25
......................................AGCGGGGTATAGAGTTCCTACG................................................................................................................................................	22	4	68.75	38.75	21.75	8.00	0.25	0.00
.............................................................................TAGGAACCTCATACCGTGCTCT.........................................................................................................	22	4	66.25	4.00	31.00	2.00	4.00	25.25
......................................AGCGAGGTATAGAGTTCCCACG................................................................................................................................................	22	4	66.25	43.25	15.50	7.50	0.00	0.00
......................................AGCGAGGTATAGAGTCCCTACG................................................................................................................................................	22	4	66.00	48.25	13.25	4.50	0.00	0.00
.............................................................................TAGGCACTTCATACCGTGCTCT.........................................................................................................	22	4	65.25	5.50	51.00	2.75	1.00	5.00
......................................AGCGCGGTATAGAGTTCCTACG................................................................................................................................................	22	4	63.25	34.00	22.25	7.00	0.00	0.00
.............................................................................TAGGAACTTTATACCGTGCTCT.........................................................................................................	22	4	62.50	3.50	30.75	1.25	2.75	24.25
.............................................................................TAGGAACTTCATACCGCGCTC..........................................................................................................	21	4	62.00	1.25	57.50	0.00	0.50	2.75
......................................AGCGAGGTATATAGTTCCTACG................................................................................................................................................	22	4	62.00	16.75	19.00	26.25	0.00	0.00
......................................AGCGAGGTAGAGAGTTCCTACG................................................................................................................................................	22	4	60.50	1.25	56.75	2.50	0.00	0.00
.............................................................................TAGGAACTTCATACCCTGCTCT.........................................................................................................	22	4	59.75	5.50	37.75	2.50	2.00	12.00
.............................................................................TAGGAAATTAATACCGTGCTCT.........................................................................................................	22	4	59.50	0.00	54.00	0.00	0.00	5.50
.............................................................................TAGGAACTTCATACCGTACTCT.........................................................................................................	22	4	58.75	9.75	25.50	2.00	2.00	19.50
......................................AGCGAGGTATAGCGTTCCTACG................................................................................................................................................	22	4	55.25	18.50	28.50	8.25	0.00	0.00
......................................AGCGAGGTATAGAGTTCCGACG................................................................................................................................................	22	4	55.25	4.50	43.25	7.50	0.00	0.00
.............................................................................TAGGAACTTCATACCGTGCTCTC........................................................................................................	23	4	54.50	4.00	17.50	1.25	15.50	16.25
......................................AGCGAGGTATAGAGTTCCTAAG................................................................................................................................................	22	4	54.25	31.75	18.50	4.00	0.00	0.00
.............................................................................TAGGAACTTCATACCxTGCTCT.........................................................................................................	21	4	52.25	2.50	2.00	0.25	8.00	39.50
.............................................................................TAGGAACTTCATACCGTGCTCTG........................................................................................................	23	4	50.75	5.75	35.75	0.25	1.50	7.50
.............................................................................TAAGAACTTCATACCGTGCTCT.........................................................................................................	22	4	50.25	0.50	39.50	3.00	1.25	6.00
......................................AGCGAGGTATAGGGTTCCTACG................................................................................................................................................	22	4	49.00	30.50	13.50	5.00	0.00	0.00
......................................AGCGAGGTATAGAGTTCCTATG................................................................................................................................................	22	4	47.75	15.75	28.50	3.50	0.00	0.00
......................................AGCGAGGTATAGAGTTCC....................................................................................................................................................	18	4	47.25	1.75	25.00	0.25	2.25	18.00
.............................................................................TAGGAACTTCATACCGTGCGCT.........................................................................................................	22	4	47.00	1.25	38.25	1.25	1.00	5.25
.............................................................................TAGGAACTGCATACCGTGCTCT.........................................................................................................	22	4	46.75	0.00	45.50	0.50	0.25	0.50
.............................................................................TAGGAACTTCATACCGTGCTAT.........................................................................................................	22	4	46.25	2.50	29.75	1.50	1.25	11.25
.............................................................................TACGAACTTCATACCGTGCTCT.........................................................................................................	22	4	46.25	2.00	17.50	4.00	6.75	16.00
......................................AGCGAGGTATACAGTTCCTACG................................................................................................................................................	22	4	44.75	17.50	14.75	12.50	0.00	0.00
..............................................................................AGGAACTTCATACCGTGCTCT.........................................................................................................	21	4	44.25	2.75	14.75	0.25	5.00	21.50
......................................AGCGAGGTGTAGAGTTCCTACG................................................................................................................................................	22	4	43.50	30.25	9.00	4.00	0.25	0.00
......................................AGCGAGGTATGGAGTTCCTACG................................................................................................................................................	22	4	43.25	27.75	12.75	2.75	0.00	0.00
.............................................................................TAGGAACTTAATACCGCGCTCT.........................................................................................................	22	4	42.50	0.00	32.00	0.00	0.25	10.25
........................................CGAGGTATAGAGTTCCTACG................................................................................................................................................	20	4	42.50	36.50	5.75	0.25	0.00	0.00
.............................................................................TAGGAACTTCATACCGTGATCT.........................................................................................................	22	4	42.50	2.25	23.50	1.75	1.50	13.50

droMoj3

CCAAAGTAT---------GCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCAATTTAAATACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAACACAACTCAA-------ACAAAAA-----------------------C-GAAAACGAGCGCAAAGCAAAGCGCAGTGCGAG-----GCAGC-	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
......................................AGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	69198.00	31747.50	18098.25	12413.50	6938.75
.............................................................................TAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	50070.75	6720.50	20194.25	14202.00	8954.00
.............................................................................TAGGAACTTCATACCGTGCTC..........................................................................................................	21	4	11401.50	675.25	6391.25	4308.25	26.75
.............................................................................TAGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	3579.50	65.25	2180.75	1292.50	41.00
.......................................GCGAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	2053.75	1187.25	494.50	341.25	30.75
......................................AGCGAGGTATAGAGTTCCTAC.................................................................................................................................................	21	4	1372.50	624.00	449.00	290.50	9.00
.............................................................................TAGGAACTTAATACCGTGCTC..........................................................................................................	21	4	1239.50	6.00	793.25	439.75	0.50
......................................AGCGAGGTATAGAGTTCCT...................................................................................................................................................	19	4	915.00	489.00	264.00	161.25	0.75
.............................................................................TAGGAACTTCATACCGTGCTCTT........................................................................................................	23	4	766.50	91.50	385.00	265.50	24.50
.............................................................................TAGGAACTTCATACCGTGCT...........................................................................................................	20	4	654.50	50.50	356.25	243.25	4.50
......................................AGCGAGGTATAGAGTTCCTA..................................................................................................................................................	20	4	458.50	213.50	151.50	93.00	0.50
......................................AGCGAGGGATAGAGTTCCTACG................................................................................................................................................	22	4	456.25	48.00	247.50	126.75	34.00
......................................AGCGAGGTATAGAGTTCCTACGT...............................................................................................................................................	23	4	443.25	131.50	177.75	132.25	1.75
.............................................................................TAGGAACTTCATACCGCGCTCT.........................................................................................................	22	4	307.00	4.00	166.75	106.75	29.50
......................................AGCGAGGTATAGAGTTCCTACT................................................................................................................................................	22	4	289.50	128.00	68.00	84.75	8.75
.............................................................................TAGGAGCTTCATACCGTGCTCT.........................................................................................................	22	4	213.50	4.50	116.25	82.75	10.00
......................................AGCGAGGTATAGAGTTCCTCCG................................................................................................................................................	22	4	195.25	1.75	38.00	134.75	20.75
......................................AGCGAGGCATAGAGTTCCTACG................................................................................................................................................	22	4	178.25	46.00	83.00	32.75	16.50
......................................AGCGAGGTATAGAGCTCCTACG................................................................................................................................................	22	4	172.50	13.00	70.75	68.25	20.50
......................................AGCGCGGTATAGAGTTCCTACG................................................................................................................................................	22	4	168.00	9.50	84.50	57.00	17.00
.............................................................................TAGGAACTTCATACCGTGCTCTC........................................................................................................	23	4	166.00	42.50	68.75	52.25	2.50
.............................................................................TAGCAACTTCATACCGTGCTCT.........................................................................................................	22	4	140.50	3.25	78.25	54.25	4.75
......................................AGCGAGGTATAGAGTTCCTACA................................................................................................................................................	22	4	130.50	54.00	37.75	31.75	7.00
......................................AGCGGGGTATAGAGTTCCTACG................................................................................................................................................	22	4	126.25	34.50	40.25	35.00	16.50
.............................................................................TAGGAAATTCATACCGTGCTCT.........................................................................................................	22	4	124.50	0.50	58.00	32.50	33.50
.............................................................................TAGGGACTTCATACCGTGCTCT.........................................................................................................	22	4	117.00	6.25	53.50	39.50	17.75
......................................AGCGAGGTATAGAGTTACTACG................................................................................................................................................	22	4	116.50	10.25	58.75	30.75	16.75
............................................................................CTAGGAACTTCATACCGTGCTCT.........................................................................................................	23	4	116.25	3.75	51.25	35.50	25.75
.............................................................................TAGGAACTTCCTACCGTGCTCT.........................................................................................................	22	4	115.00	0.50	18.25	71.75	24.50
......................................AGAGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	112.00	6.50	56.50	26.25	22.75
.............................................................................TAGGAACGTCATACCGTGCTCT.........................................................................................................	22	4	109.25	0.25	68.25	37.00	3.75
......................................AGCGAGGTATAGAGGTCCTACG................................................................................................................................................	22	4	103.50	5.25	33.25	37.75	27.25
......................................AGCGAGGTATAGCGTTCCTACG................................................................................................................................................	22	4	102.25	6.00	36.00	44.50	15.75
.............................................................................TAGGCACTTCATACCGTGCTCT.........................................................................................................	22	4	101.00	5.50	34.75	45.25	15.50
......................................AGCGAGGTATAGAGTTCCTACGC...............................................................................................................................................	23	4	99.75	49.25	27.00	21.75	1.75
.............................................................................TAGGAACTTCATACCGTTCTCT.........................................................................................................	22	4	95.50	6.25	21.75	60.25	7.25
.............................................................................TAGGTACTTCATACCGTGCTCT.........................................................................................................	22	4	90.00	1.25	30.75	37.50	20.50
......................................AGCGAGGTATAGAGTTCCTATG................................................................................................................................................	22	4	89.75	11.50	42.25	30.00	6.00
.............................................................................TAGGAACTTCATACCGAGCTCT.........................................................................................................	22	4	89.00	1.50	59.50	19.50	8.50
.............................................................................TAGGAACTTCATACCGCGCTC..........................................................................................................	21	4	87.00	0.25	53.25	33.25	0.25
......................................AGCGAGGTATAGAGTTCCTACGTT..............................................................................................................................................	24	4	86.50	43.50	22.75	20.00	0.25
......................................AGCGAGGTATAGAGTTCCTAAG................................................................................................................................................	22	4	86.00	9.75	30.25	21.50	24.50
.............................................................................TAGGAACTTCATAACGTGCTCT.........................................................................................................	22	4	84.25	2.00	26.25	43.50	12.50
.............................................................................TAGGAACTTCATACAGTGCTCT.........................................................................................................	22	4	82.50	2.00	42.00	19.75	18.75
......................................GGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	82.25	32.75	25.00	16.00	8.50
......................................AGCGAGGTATAGAGTTCCTACC................................................................................................................................................	22	4	81.50	19.00	33.00	24.25	5.25
.............................................................................TAGGAACTTCGTACCGTGCTCT.........................................................................................................	22	4	81.25	3.75	34.00	28.75	14.75
......................................AGCGAGGTATATAGTTCCTACG................................................................................................................................................	22	4	80.50	28.50	29.75	18.75	3.50
......................................AGCGAGGTATAGTGTTCCTACG................................................................................................................................................	22	4	80.25	0.50	41.50	27.50	10.75
......................................AGCGAGGTATAGAGTTCCGACG................................................................................................................................................	22	4	80.00	1.00	36.00	24.25	18.75
......................................AGCGAGGAATAGAGTTCCTACG................................................................................................................................................	22	4	79.75	24.25	44.00	8.00	3.50
......................................AGCGAGGTATAGAGTTCATACG................................................................................................................................................	22	4	75.00	21.75	28.25	16.00	9.00
.............................................................................TAGGAACTTAATACCGTGCTCTT........................................................................................................	23	4	74.25	0.75	52.50	21.00	0.00
.............................................................................TAGGAACTTCATACCGTGCTCC.........................................................................................................	22	4	72.25	8.50	31.75	24.75	7.25
.............................................................................TAGGAACTTCATACCGTGCTCTA........................................................................................................	23	4	72.00	7.25	37.75	25.25	1.75
......................................AGCGAGGTATAGAGTCCCTACG................................................................................................................................................	22	4	70.50	15.25	33.25	15.75	6.25
......................................AGCGAGGTATAGAGTTCCTC..................................................................................................................................................	20	4	69.00	23.25	29.75	16.00	0.00
.............................................................................TAGGAACTTCATACCATGCTCT.........................................................................................................	22	4	66.75	3.00	21.75	30.25	11.75
......................................AGCGAGGTATAGAGATCCTACG................................................................................................................................................	22	4	66.75	2.25	33.25	21.50	9.75
......................................AGCGAGGTATAGAGTTCCTACGA...............................................................................................................................................	23	4	65.25	23.00	21.50	20.75	0.00
......................................AGCGAGGTGTAGAGTTCCTACG................................................................................................................................................	22	4	64.75	14.75	20.75	20.50	8.75
.............................................................................TAGGAACTTCAGACCGTGCTCT.........................................................................................................	22	4	64.75	0.25	38.25	19.50	6.75
.............................................................................TAGGAACTTCATACCGTGCTCTG........................................................................................................	23	4	63.75	4.00	34.00	25.00	0.75
.............................................................................TGGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	63.25	6.00	25.75	22.50	9.00
......................................AGCGAGGTATGGAGTTCCTACG................................................................................................................................................	22	4	62.75	13.00	26.00	15.00	8.75
.............................................................................TAAGAACTTCATACCGTGCTCT.........................................................................................................	22	4	62.25	2.25	19.75	31.00	9.25
......................................AGCGAGGTATAGAGTTCCCACG................................................................................................................................................	22	4	61.50	11.00	25.25	16.25	9.00
......................................AGCGAGGTATAGGGTTCCTACG................................................................................................................................................	22	4	60.75	13.25	25.00	16.75	5.75
......................................AGCGAGGTATAGAGTTCCTACGTC..............................................................................................................................................	24	4	60.00	40.75	11.25	8.00	0.00
.............................................................................TAGGAACTTCATACCGTGCCCT.........................................................................................................	22	4	59.50	2.50	27.50	20.75	8.75
.............................................................................TAGGAACTTCATACTGTGCTCT.........................................................................................................	22	4	59.50	5.75	29.00	15.25	9.50
.............................................................................TAGGAACTTCATACCGGGCTCT.........................................................................................................	22	4	59.25	0.75	29.00	20.25	9.25
.............................................................................TAGGAACTTAATACCGTGCT...........................................................................................................	20	4	58.25	0.25	39.25	18.75	0.00
......................................AGCGAGGTACAGAGTTCCTACG................................................................................................................................................	22	4	57.25	13.25	25.50	13.25	5.25
.............................................................................TAGGAACTTCACACCGTGCTCT.........................................................................................................	22	4	57.25	2.00	26.25	21.75	7.25
.............................................................................TAGGAACTTCATACCGTGCTT..........................................................................................................	21	4	56.75	3.75	29.25	23.75	0.00
.............................................................................TAGGAACTTCATACCCTGCTCT.........................................................................................................	22	4	56.25	2.50	25.25	26.25	2.25
......................................AGCGAGGTATCGAGTTCCTACG................................................................................................................................................	22	4	55.50	2.75	14.25	29.75	8.75
.............................................................................CAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	54.75	3.00	27.50	16.25	8.00
......................................AGCGAGGTATACAGTTCCTACG................................................................................................................................................	22	4	54.50	6.75	22.75	19.00	6.00
.............................................................................TAGGAACTTCATACCTTGCTCT.........................................................................................................	22	4	54.50	12.50	19.25	19.25	3.50
.............................................................................TAGGAACCTCATACCGTGCTCT.........................................................................................................	22	4	54.25	4.00	23.75	18.25	8.25
......................................AGCGTGGTATAGAGTTCCTACG................................................................................................................................................	22	4	54.00	5.50	23.75	15.00	9.75
.............................................................................TAGGAACTTCATACCGTGATCT.........................................................................................................	22	4	54.00	2.50	21.75	18.00	11.75
.............................................................................TAGGAACTTCATACCGTGCTAT.........................................................................................................	22	4	50.00	2.00	18.00	15.00	15.00
.............................................................................TAGGAACTTCATACCGTCCTCT.........................................................................................................	22	4	49.75	3.25	27.50	9.00	10.00
......................................AGCGAGGTATAGAGTTCTTACG................................................................................................................................................	22	4	49.25	7.75	26.25	10.00	5.25
......................................ATCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	47.00	40.25	4.25	2.50	0.00
......................................AGCGAGGTATAGAGTTCCTGCG................................................................................................................................................	22	4	47.00	7.50	19.25	9.75	10.50
.............................................................................TCGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	46.75	1.25	11.00	30.00	4.50
......................................AGCAAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	46.00	16.75	10.00	12.00	7.25
........................................CGAGGTATAGAGTTCCTACG................................................................................................................................................	20	4	45.25	31.75	6.75	6.50	0.25
.............................................................................TAGGAACTCCATACCGTGCTCT.........................................................................................................	22	4	43.00	2.50	21.50	12.00	7.00
.............................................................................TAGGAACTTCATATCGTGCTCT.........................................................................................................	22	4	42.75	3.50	18.75	11.75	8.75
.............................................................................TAGGAATTTCATACCGTGCTCT.........................................................................................................	22	4	38.75	2.25	23.00	8.00	5.50
.............................................................................TAGCAACTTCATACCGTGCTC..........................................................................................................	21	4	38.75	0.25	23.25	15.25	0.00
......................................AGCGAGGTATAGAGTTTCTACG................................................................................................................................................	22	4	38.50	10.25	12.50	8.50	7.25
......................................AGCGATGTATAGAGTTCCTACG................................................................................................................................................	22	4	38.25	26.00	5.25	4.75	2.25
.............................................................................TAGGAACTTCATCCCGTGCTCT.........................................................................................................	22	4	38.25	0.75	14.50	18.75	4.25
......................................AGTGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	38.00	15.25	11.50	7.25	4.00
.............................................................................TAGGAACTTCATACCGTACTCT.........................................................................................................	22	4	37.50	3.00	12.75	16.00	5.75

droGri2

CAAAAATAT---------GCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTAAATTTAAATACTCATAGGAACTTCATACCGTGCTCTTGGAAGACCAAAACACAACAAAGAAACCCAACCTTAAGCGG---------------------------------------------AATGCGATCAACAAATACG	Size	Hit Count	Total Norm	V109 Male body
......................................AGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	12220.25	12220.25
.............................................................................TAGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	3033.75	3033.75
.............................................................................TAGGAACTTCATACCGTGCTC..........................................................................................................	21	4	191.75	191.75
......................................AGCGAGGTATAGAGTTCATACG................................................................................................................................................	22	4	125.25	125.25
......................................AGCGAGGTATAGAGTTCCTAC.................................................................................................................................................	21	4	112.75	112.75
......................................AGCGAGGTATAGAGTTCTTACG................................................................................................................................................	22	4	79.00	79.00
......................................AGCGAGGTATAGAGTTCGTACG................................................................................................................................................	22	4	78.50	78.50
......................................AGCGAGGTATAGAGTTCCT...................................................................................................................................................	19	4	59.00	59.00
.............................................................................TAGGAACTTCATACCGTGCTCTT........................................................................................................	23	4	44.25	44.25
......................................AGCGAGGTCTAGAGTTCCTACG................................................................................................................................................	22	4	42.50	42.50
......................................AGCGAGGCATAGAGTTCCTACG................................................................................................................................................	22	4	41.75	41.75
.......................................GCGAGGTATAGAGTTCCTACG................................................................................................................................................	21	4	35.00	35.00
......................................AGCGAGGTATAGAGTTCCTA..................................................................................................................................................	20	4	34.50	34.50
......................................AGCGAGGTATAGAGTTCCTACT................................................................................................................................................	22	4	34.50	34.50
......................................AGAGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	34.50	34.50
......................................AGCGAGGTTTAGAGTTCCTACG................................................................................................................................................	22	4	33.50	33.50
.............................................................................TAGGAACTTCATACCGTCCTCT.........................................................................................................	22	4	32.50	32.50
.............................................................................TAGGAACTTCATACCGTGCT...........................................................................................................	20	4	32.00	32.00
......................................AGCGAGATATAGAGTTCCTACG................................................................................................................................................	22	4	31.50	31.50
......................................AGTGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	30.25	30.25
.............................................................................TAGGAACTTCATACCGTACTCT.........................................................................................................	22	4	30.25	30.25
......................................AGCGAGCTATAGAGTTCCTACG................................................................................................................................................	22	4	29.00	29.00
......................................AGCGAGGTATAGAGTTCCTACC................................................................................................................................................	22	4	28.25	28.25
......................................AGCGAGGTATAGAGTTCCTACGT...............................................................................................................................................	23	4	28.00	28.00
......................................AGCGCGGTATAGAGTTCCTACG................................................................................................................................................	22	4	26.25	26.25
......................................AGCGAAGTATAGAGTTCCTACG................................................................................................................................................	22	4	26.00	26.00
......................................AGCGACGTATAGAGTTCCTACG................................................................................................................................................	22	4	25.50	25.50
......................................AGCGAGGTGTAGAGTTCCTACG................................................................................................................................................	22	4	22.50	22.50
.............................................................................TAGGAACTTCATACCGTTCTCT.........................................................................................................	22	4	18.00	18.00
......................................AGCGAGGTATAGAGTTCCTACA................................................................................................................................................	22	4	18.00	18.00
......................................AGCGAGGTATAGAGTCCCTACG................................................................................................................................................	22	4	16.25	16.25
......................................AGCGAGGAATAGAGTTCCTACG................................................................................................................................................	22	4	16.00	16.00
......................................AGGGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	14.75	14.75
......................................AGCGAGGTATAGAGTTCCTAAG................................................................................................................................................	22	4	14.00	14.00
......................................AGCGATGTATAGAGTTCCTACG................................................................................................................................................	22	4	13.50	13.50
......................................AGCGAGGTATACAGTTCCTACG................................................................................................................................................	22	4	12.50	12.50
......................................AGCGAGGTATAGCGTTCCTACG................................................................................................................................................	22	4	12.25	12.25
.............................................................................TAGGAACTCCATACCGTGCTCT.........................................................................................................	22	4	11.50	11.50
......................................AGCGAGGTACAGAGTTCCTACG................................................................................................................................................	22	4	11.50	11.50
......................................AGCGAGGTATAGAGCTCCTACG................................................................................................................................................	22	4	11.25	11.25
......................................AGCGAGGTATAGAGTTCCCACG................................................................................................................................................	22	4	11.25	11.25
......................................AGCGAGGGATAGAGTTCCTACG................................................................................................................................................	22	4	11.00	11.00
.............................................................................TAGGAAATTCATACCGTGCTCT.........................................................................................................	22	4	11.00	11.00
.............................................................................TAGGAACTTAATACCGTGCTCT.........................................................................................................	22	4	10.50	10.50
........................................CGAGGTATAGAGTTCCTACG................................................................................................................................................	20	4	10.50	10.50
......................................AGCGAGGTATAGAGTTCCTCCG................................................................................................................................................	22	4	10.25	10.25
......................................AGCGAGTTATAGAGTTCCTACG................................................................................................................................................	22	4	10.25	10.25
......................................ATCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	10.25	10.25
.............................................................................TAAGAACTTCATACCGTGCTCT.........................................................................................................	22	4	9.50	9.50
.............................................................................TAGGCACTTCATACCGTGCTCT.........................................................................................................	22	4	9.50	9.50
.............................................................................TAGGACCTTCATACCGTGCTCT.........................................................................................................	22	4	9.50	9.50
......................................AGCGGGGTATAGAGTTCCTACG................................................................................................................................................	22	4	9.25	9.25
......................................ACCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	9.25	9.25
......................................AGCCAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	8.25	8.25
......................................AGCGAGGTATAGAGTTACTACG................................................................................................................................................	22	4	8.25	8.25
......................................AGCGAGGTATAAAGTTCCTACG................................................................................................................................................	22	4	7.75	7.75
.............................................................................TAGGAATTTCATACCGTGCTCT.........................................................................................................	22	4	7.50	7.50
......................................AGCGAGGTATAGACTTCCTACG................................................................................................................................................	22	4	7.50	7.50
.............................................................................TAGGAACTTCATACCGTGCTCC.........................................................................................................	22	4	7.25	7.25
......................................AGCTAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	7.00	7.00
......................................AGCGAGGTATAGAATTCCTACG................................................................................................................................................	22	4	6.75	6.75
.............................................................................TACGAACTTCATACCGTGCTCT.........................................................................................................	22	4	6.75	6.75
.............................................................................TATGAACTTCATACCGTGCTCT.........................................................................................................	22	4	6.75	6.75
......................................AGCGAGGTATCGAGTTCCTACG................................................................................................................................................	22	4	6.50	6.50
......................................AGCGAGGTATATAGTTCCTACG................................................................................................................................................	22	4	6.50	6.50
......................................AGCGAGGTATAGAGTTCCTATG................................................................................................................................................	22	4	6.00	6.00
.............................................................................TAGGAGCTTCATACCGTGCTCT.........................................................................................................	22	4	6.00	6.00
......................................GGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	6.00	6.00
.............................................................................TAGGAACTACATACCGTGCTCT.........................................................................................................	22	4	6.00	6.00
.............................................................................TAGGAACTTCATACCTTGCTCT.........................................................................................................	22	4	5.50	5.50
......................................AGCGAGGTATGGAGTTCCTACG................................................................................................................................................	22	4	5.50	5.50
......................................AGCAAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	5.25	5.25
......................................AACGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	5.25	5.25
.............................................................................TAGGAACTTCATACCGTGCCCT.........................................................................................................	22	4	4.75	4.75
......................................AGCGAGGTATAGGGTTCCTACG................................................................................................................................................	22	4	4.50	4.50
......................................AGCGAGGTATAGAGTTTCTACG................................................................................................................................................	22	4	4.50	4.50
......................................AGCGAGGTATAGATTTCCTACG................................................................................................................................................	22	4	4.50	4.50
.............................................................................TAGGAACTGCATACCGTGCTCT.........................................................................................................	22	4	4.50	4.50
............................................................................CTAGGAACTTCATACCGTGCTCT.........................................................................................................	23	4	4.25	4.25
.............................................................................TAGGAACTTCATACCGCGCTCT.........................................................................................................	22	4	4.25	4.25
......................................AGCGAGGTATAGAGTTCCTACGTT..............................................................................................................................................	24	4	4.00	4.00
.............................................................................TAGGAACTTCATACAGTGCTCT.........................................................................................................	22	4	4.00	4.00
......................................AGCGAGGxxTAGAGTTCCTACG................................................................................................................................................	20	4	3.75	3.75
.............................................................................TAGGAACTTCATACCCTGCTCT.........................................................................................................	22	4	3.75	3.75
......................................AGCGTGGTATAGAGTTCCTACG................................................................................................................................................	22	4	3.50	3.50
......................................CGCGAGGTATAGAGTTCCTACG................................................................................................................................................	22	4	3.50	3.50
.............................................................................TAGGAACTTCATACCGTGCTAT.........................................................................................................	22	4	3.50	3.50
......................................AGCGAGGTATAGAGTTCCAACG................................................................................................................................................	22	4	3.50	3.50
.............................................................................TAGGATCTTCATACCGTGCTCT.........................................................................................................	22	4	3.25	3.25
.............................................................................TAGGAACCTCATACCGTGCTCT.........................................................................................................	22	4	3.25	3.25
......................................AGCGAGGTATAGAGTTCCTACGA...............................................................................................................................................	23	4	3.25	3.25
......................................AGCGAGGTATAGAGTTCCTGCG................................................................................................................................................	22	4	3.25	3.25
.............................................................................TAGGAACTTCACACCGTGCTCT.........................................................................................................	22	4	3.25	3.25
.............................................................................TCGGAACTTCATACCGTGCTCT.........................................................................................................	22	4	3.00	3.00
.............................................................................TAGGAAGTTCATACCGTGCTCT.........................................................................................................	22	4	3.00	3.00
.............................................................................TAGGGACTTCATACCGTGCTCT.........................................................................................................	22	4	2.75	2.75
......................................AGCGAxGTATAGAGTTCCTACG................................................................................................................................................	21	4	2.75	2.75
.............................................................................TAGGAACTTCCTACCGTGCTCT.........................................................................................................	22	4	2.50	2.50
.............................................................................TAGGAACTTCATACCGTCCTC..........................................................................................................	21	4	2.50	2.50
.............................................................................TAGGAACTTCATACCGTGCTCTTT.......................................................................................................	24	4	2.50	2.50
.............................................................................TAGGAACTTCATACCGTGTTCT.........................................................................................................	22	4	2.50	2.50

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image