Possible Orthologs for dme-mir-276a

droSim1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 chr3L:9747980-9748107 + 98.44
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
....................................................................TAGGAACTTCATACCGTGCTCT......................................228160317.132437.00134020.1316354.757505.25
....................................................................TAGGAACTTAATACCGTGCTCT......................................22855338.6325.3854109.63566.00637.63
....................................................................TAGGAACTTCATACCGTGCTCC......................................22823326.132.1320608.001769.00947.00
....................................................................TAGGAACTTCATACCGTGCTC.......................................21821377.7512.7518466.752713.38184.88
....................................................................TAGGAACTTAATACCGTGCTCC......................................2288294.500.008149.0060.5085.00
....................................................................TAGGAACTTCATACCGTGCT........................................2086550.632.505728.88800.8818.38
....................................................................TAGGAACTTAATACCGTGCTC.......................................2185672.250.385598.0051.7522.13
....................................................................TAGGAACTTCATACCGTGCTCG......................................2284209.501.133297.88629.50281.00
...............................AGCGAGGTATAGAGTTCCTACG...........................................................................2282902.632789.6390.1317.255.63
....................................................................TAGGAACTTAATACCGTGCT........................................2081735.500.131718.0013.883.50
....................................................................TAGGAACTTAATACCGTGCTCG......................................2281315.630.001272.1320.2523.25
....................................................................TAGGAACTTCATACCGTGCC........................................208911.750.00830.1379.132.50
....................................................................TAGGAACTTCATACCGTGCTCTT.....................................238870.633.63692.88166.507.63
....................................................................TAGGAACTTCATACCTTGCTCT......................................228385.131.63328.2530.6324.63
....................................................................TAGGAACTTCATACCGTGC.........................................198307.750.13262.0037.388.25
....................................................................TAGGAACTTAATACCTTGCTCT......................................228274.000.13268.501.134.25
....................................................................TAGGAACTTAATACCGTGCTCTT.....................................238265.630.00261.752.881.00
....................................................................TAGGAACTTCATACCGTGCG........................................208246.630.00199.3845.631.63
....................................................................TAGGAACTTCATACCGGGCTCT......................................228234.383.63205.8817.507.38
....................................................................TAGGAACTTAATACCGTGCC........................................208232.130.00231.630.500.00
....................................................................TAGGAACTTCATACCGTGCTT.......................................218193.880.00148.7544.880.25
....................................................................TATGAACTTCATACCGTGCTCT......................................228193.380.63161.2517.3814.13
....................................................................TAGGGACTTCATACCGTGCTCT......................................228185.386.88154.8817.136.50
....................................................................TAGGAACTTCATACCxTGCTCT......................................218166.500.13142.6310.2513.50
....................................................................TAGGAACTTCATACCGTGCCCT......................................228162.502.75133.7518.008.00
....................................................................TGGGAACTTCATACCGTGCTCT......................................228142.002.25117.3815.756.63
....................................................................TAGGAACTTCATACCGCGCTCT......................................228125.638.50100.5012.634.00
....................................................................TAGGAACTTCATACCGTGCTCTA.....................................238123.380.38100.6321.630.75
....................................................................TAGGAACTTAATACCxTGCTCT......................................218120.000.00118.880.250.88
....................................................................TAGGAACTTCATACTGTGCTCT......................................228110.133.3892.389.884.50
....................................................................TAGGAACTTCATGCCGTGCTCT......................................228106.382.8886.2512.135.13
....................................................................TACGAACTTCATACCGTGCTCT......................................228103.250.1383.506.2513.38
....................................................................TAGGAACTTAATACCGGGCTCT......................................22895.750.0094.880.500.38
...............................AGCGAGGTATAGAGTTCCT..............................................................................19891.131.5076.1313.250.25
....................................................................TAGGAACTTTATACCGTGCTCT......................................22888.504.6377.504.881.50
....................................................................TAGGAACTTCATACCATGCTCT......................................22888.502.0070.8810.635.00
.....................................................................AGGAACTTCATACCGTGCTCT......................................21880.250.8868.138.382.88
....................................................................TAGGAGCTTCATACCGTGCTCT......................................22880.003.8863.509.133.50
......................................................................TGAACTTCATACCGTGCTCT......................................20878.500.0066.385.007.13
....................................................................TAGGGACTTAATACCGTGCTCT......................................22876.000.3874.630.001.00
....................................................................TAGGAACCTCATACCGTGCTCT......................................22875.633.2558.009.634.75
....................................................................TAGGAACTTCATACAGTGCTCT......................................22874.506.1359.887.001.50
....................................................................TAGGAACTTCATACCGAGCTCT......................................22873.884.0061.006.632.25
....................................................................TATGAACTTAATACCGTGCTCT......................................22871.630.0070.250.251.13
....................................................................TAGGAACTTCATACCGTGG.........................................19868.130.0056.8811.000.25
....................................................................TAGGAACTTCATACCGTGCTCTC.....................................23867.880.6356.889.001.38
....................................................................TAGGAACTTAATACCGTGC.........................................19867.380.0066.630.380.38
....................................................................TAGGAACTTCACACCGTGCTCT......................................22865.751.7555.006.382.63
....................................................................TAGGCACTTCATACCGTGCTCT......................................22864.386.1351.135.251.88
....................................................................TAGGAACTTCGTACCGTGCTCT......................................22864.252.7552.006.133.38
....................................................................TAGGAACTTCATACCCTGCTCT......................................22861.881.6351.755.503.00
....................................................................TAGGAACTTAATACCGTGCG........................................20859.880.0059.250.380.25
....................................................................TAGGAACTTCATACCTTGCTC.......................................21858.630.0051.885.880.88
....................................................................CAGGAACTTCATACCGTGCTCT......................................22857.752.0043.505.636.63
....................................................................TAGGAACTTCATACCGTTCTCT......................................22856.752.0046.755.003.00
....................................................................TAGGAACTTCATACCGTACTCT......................................22856.251.0047.505.002.75
.....................................................................TAGAACTTCATACCGTGCTCT......................................214112.250.2596.506.009.50
...............................AGCGAGGTATAGAGTTCC...............................................................................18855.500.1348.506.750.13
...................................................................CTAGGAACTTCATACCGTGCTCT......................................23855.388.8838.255.382.88
....................................................................TAGGAACTTCATACCTTGCTCC......................................224106.750.0095.006.505.25
....................................................................TAGGAACTTAATACCGTGCCCT......................................22852.130.0050.750.630.75
....................................................................TGGGAACTTAATACCGTGCTCT......................................22851.250.0050.130.630.50
....................................................................TAGGAACTTAATACTGTGCTCT......................................22849.880.0048.880.630.38
....................................................................TAGTAACTTCATACCGTGCTCT......................................22848.000.1339.504.753.63
....................................................................TAGGAACTTAATACCGCGCTCT......................................22846.380.0045.500.380.50
....................................................................TAGGAACTTCATATCGTGCTCT......................................22845.252.6336.135.501.00
....................................................................TAGGAACTCCATACCGTGCTCT......................................22844.131.7537.004.001.38
....................................................................TAGGAACTTCATACCGTCCTCT......................................22843.133.0035.382.632.13
....................................................................TATGAACTTCATACCGTGCTC.......................................21840.130.0036.633.250.25
....................................................................TAGGAGCTTCATACCGTGCTC.......................................21839.750.0038.001.750.00
....................................................................TACGAACTTAATACCGTGCTCT......................................22838.630.0037.500.380.75
....................................................................TAGGAACTTCATACCGGGCTCC......................................22476.750.0070.503.253.00
....................................................................TAGGAACTTAATGCCGTGCTCT......................................22837.500.0037.130.000.38
....................................................................TAGGAACTTAATACCCTGCTCT......................................22835.630.1334.750.380.38
....................................................................TAGGAACTTAATACCATGCTCT......................................22832.880.1331.500.380.88
....................................................................TAGGAACTTAATACCTTGCTC.......................................21832.630.0032.380.000.25
....................................................................TAGCAACTTCATACCGTGCTCT......................................22832.001.0025.882.632.50
....................................................................TAGGAACTTCATACCGTGCTCTTT....................................24831.500.1316.1315.250.00
....................................................................TAGAAACTTCATACCGTGCTCT......................................22831.500.2525.133.752.38
....................................................................TAGGAACTTAATACCGAGCTCT......................................22831.000.0030.380.250.38
....................................................................TATGAACTTCATACCGTGCTCC......................................22459.000.0052.503.253.25
......................................................................TGAACTTAATACCGTGCTCT......................................20829.250.0028.500.250.50
....................................................................TAGGAACTTAATACCGTGCTT.......................................21828.750.0028.000.630.13
....................................................................AAGGAACTTCATACCGTGCTCT......................................22828.752.2519.504.502.50
....................................................................TAGGAGCTTAATACCGTGCTCT......................................22828.250.0027.750.250.25
....................................................................TAAGAACTTCATACCGTGCTCT......................................22828.002.3821.383.500.75
....................................................................TAGGAACTTAATACCGTGCTCTA.....................................23827.880.0027.380.130.38
....................................................................TAGGTACTTCATACCGTGCTCT......................................22827.756.6318.631.501.00
....................................................................TAGGAACTTCATACCGTGCCC.......................................21827.380.0023.253.630.50
....................................................................TAGGAACTTAATACAGTGCTCT......................................22827.380.0027.000.380.00
....................................................................TAGGAACTTCATACCGTGCTCA......................................22826.630.1319.386.001.13
.....................................................................AGGAACTTAATACCGTGCTCT......................................21826.500.0025.380.500.63
....................................................................TAGGAACTTCATACCGGGCTC.......................................21825.250.0022.632.500.13
....................................................................TAGGAATTTCATACCGTGCTCT......................................22825.251.1320.382.631.13
....................................................................TAGGAACTTGATACCGTGCTCT......................................22825.130.1322.382.000.63
....................................................................TAGGGACTTCATACCGTGCTCC......................................22450.000.0044.753.501.75
....................................................................TAGGAACTTCATACCxTGCTCC......................................21447.750.0041.503.003.25
....................................................................TAGGGACTTCATACCGTGCTC.......................................21823.130.0020.502.630.00
........................................................................AACTTCATACCGTGCTCT......................................18823.000.0019.382.501.13
....................................................................TAGGAACTTCATACTGTGCTC.......................................21822.750.0020.752.000.00
....................................................................TAGGAAATTCATACCGTGCTCT......................................22822.0010.009.751.750.50
2 chr3L:9702923-9703010 + 47.85
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
--------------------TTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCC-TATTCAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGACTGTCGACCATC-------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
....................................................................TAGGAACTTCATACCGTGCTCT......................................228160317.132437.00134020.1316354.757505.25
....................................................................TAGGAACTTAATACCGTGCTCT......................................22855338.6325.3854109.63566.00637.63
....................................................................TAGGAACTTCATACCGTGCTCC......................................22823326.132.1320608.001769.00947.00
....................................................................TAGGAACTTCATACCGTGCTC.......................................21821377.7512.7518466.752713.38184.88
....................................................................TAGGAACTTAATACCGTGCTCC......................................2288294.500.008149.0060.5085.00
....................................................................TAGGAACTTCATACCGTGCT........................................2086550.632.505728.88800.8818.38
....................................................................TAGGAACTTAATACCGTGCTC.......................................2185672.250.385598.0051.7522.13
....................................................................TAGGAACTTCATACCGTGCTCG......................................2284209.501.133297.88629.50281.00
...............................AGCGAGGTATAGAGTTCCTACG...........................................................................2282902.632789.6390.1317.255.63
....................................................................TAGGAACTTAATACCGTGCT........................................2081735.500.131718.0013.883.50
....................................................................TAGGAACTTAATACCGTGCTCG......................................2281315.630.001272.1320.2523.25
....................................................................TAGGAACTTCATACCGTGCC........................................208911.750.00830.1379.132.50
....................................................................TAGGAACTTCATACCGTGCTCTT.....................................238870.633.63692.88166.507.63
....................................................................TAGGAACTTCATACCTTGCTCT......................................228385.131.63328.2530.6324.63
....................................................................TAGGAACTTCATACCGTGC.........................................198307.750.13262.0037.388.25
....................................................................TAGGAACTTAATACCTTGCTCT......................................228274.000.13268.501.134.25
....................................................................TAGGAACTTAATACCGTGCTCTT.....................................238265.630.00261.752.881.00
....................................................................TAGGAACTTCATACCGTGCG........................................208246.630.00199.3845.631.63
....................................................................TAGGAACTTCATACCGGGCTCT......................................228234.383.63205.8817.507.38
....................................................................TAGGAACTTAATACCGTGCC........................................208232.130.00231.630.500.00
....................................................................TAGGAACTTCATACCGTGCTT.......................................218193.880.00148.7544.880.25
....................................................................TATGAACTTCATACCGTGCTCT......................................228193.380.63161.2517.3814.13
....................................................................TAGGGACTTCATACCGTGCTCT......................................228185.386.88154.8817.136.50
....................................................................TAGGAACTTCATACCxTGCTCT......................................218166.500.13142.6310.2513.50
....................................................................TAGGAACTTCATACCGTGCCCT......................................228162.502.75133.7518.008.00
....................................................................TGGGAACTTCATACCGTGCTCT......................................228142.002.25117.3815.756.63
....................................................................TAGGAACTTCATACCGCGCTCT......................................228125.638.50100.5012.634.00
....................................................................TAGGAACTTCATACCGTGCTCTA.....................................238123.380.38100.6321.630.75
....................................................................TAGGAACTTAATACCxTGCTCT......................................218120.000.00118.880.250.88
....................................................................TAGGAACTTCATACTGTGCTCT......................................228110.133.3892.389.884.50
....................................................................TAGGAACTTCATGCCGTGCTCT......................................228106.382.8886.2512.135.13
....................................................................TACGAACTTCATACCGTGCTCT......................................228103.250.1383.506.2513.38
....................................................................TAGGAACTTAATACCGGGCTCT......................................22895.750.0094.880.500.38
...............................AGCGAGGTATAGAGTTCCT..............................................................................19891.131.5076.1313.250.25
....................................................................TAGGAACTTCATACCATGCTCT......................................22888.502.0070.8810.635.00
....................................................................TAGGAACTTTATACCGTGCTCT......................................22888.504.6377.504.881.50
.....................................................................AGGAACTTCATACCGTGCTCT......................................21880.250.8868.138.382.88
....................................................................TAGGAGCTTCATACCGTGCTCT......................................22880.003.8863.509.133.50
......................................................................TGAACTTCATACCGTGCTCT......................................20878.500.0066.385.007.13
....................................................................TAGGGACTTAATACCGTGCTCT......................................22876.000.3874.630.001.00
....................................................................TAGGAACCTCATACCGTGCTCT......................................22875.633.2558.009.634.75
....................................................................TAGGAACTTCATACAGTGCTCT......................................22874.506.1359.887.001.50
....................................................................TAGGAACTTCATACCGAGCTCT......................................22873.884.0061.006.632.25
....................................................................TATGAACTTAATACCGTGCTCT......................................22871.630.0070.250.251.13
....................................................................TAGGAACTTCATACCGTGG.........................................19868.130.0056.8811.000.25
....................................................................TAGGAACTTCATACCGTGCTCTC.....................................23867.880.6356.889.001.38
....................................................................TAGGAACTTAATACCGTGC.........................................19867.380.0066.630.380.38
....................................................................TAGGAACTTCACACCGTGCTCT......................................22865.751.7555.006.382.63
....................................................................TAGGCACTTCATACCGTGCTCT......................................22864.386.1351.135.251.88
....................................................................TAGGAACTTCGTACCGTGCTCT......................................22864.252.7552.006.133.38
....................................................................TAGGAACTTCATACCCTGCTCT......................................22861.881.6351.755.503.00
....................................................................TAGGAACTTAATACCGTGCG........................................20859.880.0059.250.380.25
....................................................................TAGGAACTTCATACCTTGCTC.......................................21858.630.0051.885.880.88
....................................................................CAGGAACTTCATACCGTGCTCT......................................22857.752.0043.505.636.63
....................................................................TAGGAACTTCATACCGTTCTCT......................................22856.752.0046.755.003.00
....................................................................TAGGAACTTCATACCGTACTCT......................................22856.251.0047.505.002.75
...............................AGCGAGGTATAGAGTTCC...............................................................................18855.500.1348.506.750.13
...................................................................CTAGGAACTTCATACCGTGCTCT......................................23855.388.8838.255.382.88
....................................................................TAGGAACTTAATACCGTGCCCT......................................22852.130.0050.750.630.75
....................................................................TGGGAACTTAATACCGTGCTCT......................................22851.250.0050.130.630.50
....................................................................TAGGAACTTAATACTGTGCTCT......................................22849.880.0048.880.630.38
....................................................................TAGTAACTTCATACCGTGCTCT......................................22848.000.1339.504.753.63
....................................................................TAGGAACTTAATACCGCGCTCT......................................22846.380.0045.500.380.50
....................................................................TAGGAACTTCATATCGTGCTCT......................................22845.252.6336.135.501.00
....................................................................TAGGAACTCCATACCGTGCTCT......................................22844.131.7537.004.001.38
....................................................................TAGGAACTTCATACCGTCCTCT......................................22843.133.0035.382.632.13
....................................................................TATGAACTTCATACCGTGCTC.......................................21840.130.0036.633.250.25
....................................................................TAGGAGCTTCATACCGTGCTC.......................................21839.750.0038.001.750.00
....................................................................TACGAACTTAATACCGTGCTCT......................................22838.630.0037.500.380.75
....................................................................TAGGAACTTAATACCTTGCTCC......................................22476.750.0074.750.251.75
....................................................................TAGGAACTTAATGCCGTGCTCT......................................22837.500.0037.130.000.38
....................................................................TAGGAACTTAATACCCTGCTCT......................................22835.630.1334.750.380.38
....................................................................TAGGAACTTAATACCATGCTCT......................................22832.880.1331.500.380.88
....................................................................TAGGAACTTAATACCTTGCTC.......................................21832.630.0032.380.000.25
....................................................................TAGCAACTTCATACCGTGCTCT......................................22832.001.0025.882.632.50
....................................................................TAGAAACTTCATACCGTGCTCT......................................22831.500.2525.133.752.38
....................................................................TAGGAACTTCATACCGTGCTCTTT....................................24831.500.1316.1315.250.00
....................................................................TAGGAACTTAATACCGAGCTCT......................................22831.000.0030.380.250.38
......................................................................TGAACTTAATACCGTGCTCT......................................20829.250.0028.500.250.50
....................................................................AAGGAACTTCATACCGTGCTCT......................................22828.752.2519.504.502.50
....................................................................TAGGAACTTAATACCGTGCTT.......................................21828.750.0028.000.630.13
....................................................................TAGGAGCTTAATACCGTGCTCT......................................22828.250.0027.750.250.25
....................................................................TAAGAACTTCATACCGTGCTCT......................................22828.002.3821.383.500.75
....................................................................TAGGAACTTAATACCGTGCTCTA.....................................23827.880.0027.380.130.38
....................................................................TAGGTACTTCATACCGTGCTCT......................................22827.756.6318.631.501.00
....................................................................TAGGAACTTAATACAGTGCTCT......................................22827.380.0027.000.380.00
....................................................................TAGGAACTTCATACCGTGCCC.......................................21827.380.0023.253.630.50
....................................................................TAGGAACTTCATACCGTGCTCA......................................22826.630.1319.386.001.13
.....................................................................AGGAACTTAATACCGTGCTCT......................................21826.500.0025.380.500.63
....................................................................TAGGAACTTCATACCGGGCTC.......................................21825.250.0022.632.500.13
....................................................................TAGGAATTTCATACCGTGCTCT......................................22825.251.1320.382.631.13
....................................................................TAGGAACTTGATACCGTGCTCT......................................22825.130.1322.382.000.63
....................................................................TAGGGACTTCATACCGTGCTC.......................................21823.130.0020.502.630.00
........................................................................AACTTCATACCGTGCTCT......................................18823.000.0019.382.501.13
....................................................................TAGGAACTTCATACTGTGCTC.......................................21822.750.0020.752.000.00
.....................................................................TAGAACTTAATACCGTGCTCT......................................21445.000.0044.250.250.50
....................................................................TAGGAAATTCATACCGTGCTCT......................................22822.0010.009.751.750.50
...............................AGCGAGGTATAGAGTTCCTAC............................................................................21821.257.1312.001.500.63
....................................................................TAGGAACTTCATACCGTGCTTT......................................22821.131.0016.253.000.88
....................................................................TAGGAACTTCATACCGTGTTCT......................................22820.880.8817.631.750.63
....................................................................TAGGAACTTCATAACGTGCTCT......................................22820.633.8810.883.382.50


droSec1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 super_0:2571151-2571278 + 98.44
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...............................AGCGAGGTATAGAGTTCCTACG...........................................................................228256126.50114713.386584.13134829.00
....................................................................TAGGAACTTCATACCGTGCTCT......................................22833639.134123.005723.5023792.63
....................................................................TAGGAACTTCATACCGTGCTC.......................................2183756.13422.3857.383276.38
................................GCGAGGTATAGAGTTCCTACG...........................................................................2182901.751552.3839.001310.38
....................................................................TAGGAACTTAATACCGTGCTCT......................................2282135.2545.6382.252007.38
...............................AGCGAGGTATAGAGTTCCT..............................................................................1981550.13249.884.381295.88
...............................AGCGAGGTATAGAGTTCCCACG...........................................................................2281083.25920.886.75155.63
...............................AGCGAGGTATAGAGTTCCTAC............................................................................2181082.75702.5028.00352.25
...............................AGCGAGGTATAGAGTTCCAACG...........................................................................228955.50769.381.63184.50
....................................................................TAGGAACTTCATACCGTGCTCTT.....................................238682.8897.2533.00552.63
....................................................................TAGGAACTTAATACCGTGCTC.......................................218511.1310.001.00500.13
...............................AGCGCGGTATAGAGTTCCTACG...........................................................................228486.50272.2510.50203.75
...............................AGCGAGGCATAGAGTTCCTACG...........................................................................228436.50258.387.25170.88
....................................................................TAGGAACTTCATACCGTGCT........................................208361.2557.7512.25291.25
...............................AGCGAGGTATAGAGTTCCGACG...........................................................................228360.00349.250.5010.25
...............................AGCGGGGTATAGAGTTCCTACG...........................................................................228294.38172.388.00114.00
...............................AGCGAGGTATAGAGTTCCTA.............................................................................208277.25176.133.1398.00
...............................AGCGAGGTATAGAGTTCCTACA...........................................................................228252.0081.254.88165.88
...............................AGCGAGGAATAGAGTTCCTACG...........................................................................228242.6368.502.88171.25
...............................AGCGAGGTATAGAGCTCCTACG...........................................................................228223.25115.259.7598.25
...............................AGCGAGGTATAGAGTCCCTACG...........................................................................228222.88115.008.5099.38
...............................AGCGAGGTGTAGAGTTCCTACG...........................................................................228217.5082.0013.75121.75
...............................AGCGAGGTATAGAGTTCCTACGT..........................................................................238212.50128.253.1381.13
...............................AGCGAGGTATAGAGTTCCTCCG...........................................................................228209.8888.006.25115.63
...............................AGCGAGGTACAGAGTTCCTACG...........................................................................228207.7598.636.75102.38
...............................AGCGAGGTATAGAGTTCCTACC...........................................................................228201.50115.504.0082.00
...............................AGCGAGGTATATAGTTCCTACG...........................................................................228198.3855.637.50135.25
...............................AGCGAGGTATAGAGTTCCTACT...........................................................................228198.0096.632.8898.50
...............................AGCGAGGTATGGAGTTCCTACG...........................................................................228191.8874.505.88111.50
...............................ATCGAGGTATAGAGTTCCTACG...........................................................................228188.1387.134.5096.50
...............................AGCGAGGTATAGAGTTCCTAAG...........................................................................228186.8837.502.88146.50
...............................AGCGAGATATAGAGTTCCTACG...........................................................................228186.1332.752.25151.13
...............................GGCGAGGTATAGAGTTCCTACG...........................................................................228185.8874.007.63104.25
...............................AGCGAGGTATAGGGTTCCTACG...........................................................................228179.1380.508.0090.63
...............................AGCGAGGTATAGCGTTCCTACG...........................................................................228169.88101.633.6364.63
...............................AGCGAGGTATAGAGTTCATACG...........................................................................228166.7522.001.50143.25
...............................AGCGATGTATAGAGTTCCTACG...........................................................................228165.6334.751.50129.38
...............................AACGAGGTATAGAGTTCCTACG...........................................................................228163.6342.382.38118.88
...............................AGCGAGGxxTAGAGTTCCTACG...........................................................................208161.6345.2521.3895.00
...............................ACCGAGGTATAGAGTTCCTACG...........................................................................228160.0094.635.3860.00
...............................AGCGAGGGATAGAGTTCCTACG...........................................................................228155.75122.384.2529.13
...............................AGCAAGGTATAGAGTTCCTACG...........................................................................228154.0040.752.75110.50
...............................AGCGAGGTAAAGAGTTCCTACG...........................................................................228149.137.502.25139.38
...............................AGCGAAGTATAGAGTTCCTACG...........................................................................228144.5029.633.75111.13
...............................AGCTAGGTATAGAGTTCCTACG...........................................................................228144.2534.881.00108.38
...............................AGCGAGGTATACAGTTCCTACG...........................................................................228139.6386.382.8850.38
...............................AGAGAGGTATAGAGTTCCTACG...........................................................................228138.1345.381.1391.63
...............................AGTGAGGTATAGAGTTCCTACG...........................................................................228134.6352.886.1375.63
...............................AGCGAGGTATCGAGTTCCTACG...........................................................................228128.8860.003.5065.38
...............................AGCGAGGTATAGACTTCCTACG...........................................................................228127.6360.0010.2557.38
...............................AGCGAGCTATAGAGTTCCTACG...........................................................................228126.7557.752.2566.75
...............................AGCGAGGTATAGATTTCCTACG...........................................................................228123.7530.383.8889.50
...............................AGCGAGGTATAGAGTTCCTATG...........................................................................228117.3838.886.5072.00
...............................AGCGAGGTATAGAGTTCCTGCG...........................................................................228112.2548.133.0061.13
...............................AGCGAGGTATAGAGTTACTACG...........................................................................228107.5026.383.0078.13
...................................................................CTAGGAACTTCATACCGTGCTCT......................................238107.386.2517.8883.25
.................................CGAGGTATAGAGTTCCTACG...........................................................................20899.7560.132.7536.88
...............................AGCGAGTTATAGAGTTCCTACG...........................................................................22896.7528.132.3866.25
....................................................................TAGGAACTTCATACCGTGCTCTA.....................................23893.6312.504.1377.00
...............................AGCGACGTATAGAGTTCCTACG...........................................................................22893.3844.380.7548.25
...............................AGCGAGGTATAGAGTTTCTACG...........................................................................22890.0032.886.6350.50
...............................AGCCAGGTATAGAGTTCCTACG...........................................................................22889.6346.381.6341.63
...............................AGCGAGGTATAAAGTTCCTACG...........................................................................22886.2533.883.8848.50
...............................AGCGTGGTATAGAGTTCCTACG...........................................................................22876.0041.753.2531.00
...............................AGCGAGGTCTAGAGTTCCTACG...........................................................................22874.0041.002.0031.00
....................................................................TAGGAACTTCATACCGTGCTCTTT....................................24870.5016.251.1353.13
....................................................................TAGGAGCTTCATACCGTGCTCT......................................22868.634.138.7555.75
....................................................................TAGGAACTTCATACCTTGCTCT......................................22866.888.6310.3847.88
....................................................................TAGGAACTTCATACCGTGATCT......................................22865.7534.380.5030.88
...............................AGCGAGGTATAGAGTTCTTACG...........................................................................22864.1324.885.7533.50
...............................AGCGAGGTATAGAGTTCCTACGTT.........................................................................24861.5035.630.0025.88
...............................AGCGAGGTTTAGAGTTCCTACG...........................................................................22858.2519.136.1333.00
...............................AGCGAGGTATAGAATTCCTACG...........................................................................22858.1325.002.0031.13
...............................AGCGAGGTATTGAGTTCCTACG...........................................................................22855.3821.255.6328.50
....................................................................TAGGAACTTAATACCGTGCTCTT.....................................23855.131.880.2553.00
....................................................................TAGGAACTTCATACTGTGCTCT......................................22852.882.1328.8821.88
....................................................................TAGGCACTTCATACCGTGCTCT......................................22851.7510.507.0034.25
....................................................................TAGGAACTTCATACCGTGCCCT......................................22848.385.256.7536.38
....................................................................TAGGAACTTCATACCGTGCTT.......................................21846.3813.500.1332.75
....................................................................TAGTAACTTCATACCGTGCTCT......................................22846.253.004.1339.13
....................................................................TATGAACTTCATACCGTGCTCT......................................22846.003.634.0038.38
...............................AGCGAGGTATAGAGTTCC...............................................................................18846.001.001.3843.63
...............................CGCGAGGTATAGAGTTCCTACG...........................................................................22845.5024.000.5021.00
....................................................................TAGGAACTTCATACCGTGCTCC......................................22845.387.636.7531.00
..............................CAGCGAGGTATAGAGTTCCTACG...........................................................................23845.0019.751.3823.88
...............................AGCGAxGTATAGAGTTCCTACG...........................................................................21844.5019.134.0021.38
...............................AGCGAGGTATAGAGTTCCTACGA..........................................................................23843.6327.380.2516.00
....................................................................TAGGAACTTCATACCGCGCTCT......................................22843.136.0012.6324.50
....................................................................TAGGAAATTCATACCGTGCTCT......................................22842.751.001.8839.88
....................................................................TAGGAACTTCATACCGTGTTCT......................................22842.1324.009.758.38
...............................AGCGAGGTATAGAGTTCCTTT............................................................................21834.8816.500.0018.38
....................................................................TAGGAACTTCGTACCGTGCTCT......................................22834.633.507.6323.50
...............................AGCGAGGTATAGAGTTCCTACGC..........................................................................23833.6312.880.8819.88
....................................................................TAGGGACTTCATACCGTGCTCT......................................22832.635.508.1319.00
....................................................................TAGCAACTTCATACCGTGCTCT......................................22832.382.882.3827.13
....................................................................TACGAACTTCATACCGTGCTCT......................................22832.382.753.5026.13
...............................AGCGAGGTATAGAGTTCGTACG...........................................................................22831.7512.000.6319.13
....................................................................TAGGAACCTCATACCGTGCTCT......................................22831.134.007.7519.38
..................................GAGGTATAGAGTTCCTACG...........................................................................19830.758.751.2520.75
....................................................................TAGGAACTTCATACCGTTCTCT......................................22830.003.504.5022.00
....................................................................TAGGAACTTCACACCGTGCTCT......................................22829.634.506.1319.00
2 super_0:2526772-2526877 + 63.87
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
--------------------TTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCCT-ATTCAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGACTGTCG-ACCATCATATAGTTGAAAGACACA
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...............................AGCGAGGTATAGAGTTCCTACG...........................................................................228256126.50114713.386584.13134829.00
....................................................................TAGGAACTTCATACCGTGCTCT......................................22833639.134123.005723.5023792.63
....................................................................TAGGAACTTCATACCGTGCTC.......................................2183756.13422.3857.383276.38
................................GCGAGGTATAGAGTTCCTACG...........................................................................2182901.751552.3839.001310.38
....................................................................TAGGAACTTAATACCGTGCTCT......................................2282135.2545.6382.252007.38
...............................AGCGAGGTATAGAGTTCCT..............................................................................1981550.13249.884.381295.88
...............................AGCGAGGTATAGAGTTCCCACG...........................................................................2281083.25920.886.75155.63
...............................AGCGAGGTATAGAGTTCCTAC............................................................................2181082.75702.5028.00352.25
...............................AGCGAGGTATAGAGTTCCAACG...........................................................................228955.50769.381.63184.50
....................................................................TAGGAACTTCATACCGTGCTCTT.....................................238682.8897.2533.00552.63
....................................................................TAGGAACTTAATACCGTGCTC.......................................218511.1310.001.00500.13
...............................AGCGCGGTATAGAGTTCCTACG...........................................................................228486.50272.2510.50203.75
...............................AGCGAGGCATAGAGTTCCTACG...........................................................................228436.50258.387.25170.88
....................................................................TAGGAACTTCATACCGTGCT........................................208361.2557.7512.25291.25
...............................AGCGAGGTATAGAGTTCCGACG...........................................................................228360.00349.250.5010.25
...............................AGCGGGGTATAGAGTTCCTACG...........................................................................228294.38172.388.00114.00
...............................AGCGAGGTATAGAGTTCCTA.............................................................................208277.25176.133.1398.00
...............................AGCGAGGTATAGAGTTCCTACA...........................................................................228252.0081.254.88165.88
...............................AGCGAGGAATAGAGTTCCTACG...........................................................................228242.6368.502.88171.25
...............................AGCGAGGTATAGAGCTCCTACG...........................................................................228223.25115.259.7598.25
...............................AGCGAGGTATAGAGTCCCTACG...........................................................................228222.88115.008.5099.38
...............................AGCGAGGTGTAGAGTTCCTACG...........................................................................228217.5082.0013.75121.75
...............................AGCGAGGTATAGAGTTCCTACGT..........................................................................238212.50128.253.1381.13
...............................AGCGAGGTATAGAGTTCCTCCG...........................................................................228209.8888.006.25115.63
...............................AGCGAGGTACAGAGTTCCTACG...........................................................................228207.7598.636.75102.38
...............................AGCGAGGTATAGAGTTCCTACC...........................................................................228201.50115.504.0082.00
...............................AGCGAGGTATATAGTTCCTACG...........................................................................228198.3855.637.50135.25
...............................AGCGAGGTATAGAGTTCCTACT...........................................................................228198.0096.632.8898.50
...............................AGCGAGGTATGGAGTTCCTACG...........................................................................228191.8874.505.88111.50
...............................ATCGAGGTATAGAGTTCCTACG...........................................................................228188.1387.134.5096.50
...............................AGCGAGGTATAGAGTTCCTAAG...........................................................................228186.8837.502.88146.50
...............................AGCGAGATATAGAGTTCCTACG...........................................................................228186.1332.752.25151.13
...............................GGCGAGGTATAGAGTTCCTACG...........................................................................228185.8874.007.63104.25
...............................AGCGAGGTATAGGGTTCCTACG...........................................................................228179.1380.508.0090.63
...............................AGCGAGGTATAGCGTTCCTACG...........................................................................228169.88101.633.6364.63
...............................AGCGAGGTATAGAGTTCATACG...........................................................................228166.7522.001.50143.25
...............................AGCGATGTATAGAGTTCCTACG...........................................................................228165.6334.751.50129.38
...............................AACGAGGTATAGAGTTCCTACG...........................................................................228163.6342.382.38118.88
...............................AGCGAGGxxTAGAGTTCCTACG...........................................................................208161.6345.2521.3895.00
...............................ACCGAGGTATAGAGTTCCTACG...........................................................................228160.0094.635.3860.00
...............................AGCGAGGGATAGAGTTCCTACG...........................................................................228155.75122.384.2529.13
...............................AGCAAGGTATAGAGTTCCTACG...........................................................................228154.0040.752.75110.50
...............................AGCGAGGTAAAGAGTTCCTACG...........................................................................228149.137.502.25139.38
...............................AGCGAAGTATAGAGTTCCTACG...........................................................................228144.5029.633.75111.13
...............................AGCTAGGTATAGAGTTCCTACG...........................................................................228144.2534.881.00108.38
...............................AGCGAGGTATACAGTTCCTACG...........................................................................228139.6386.382.8850.38
...............................AGAGAGGTATAGAGTTCCTACG...........................................................................228138.1345.381.1391.63
...............................AGTGAGGTATAGAGTTCCTACG...........................................................................228134.6352.886.1375.63
...............................AGCGAGGTATCGAGTTCCTACG...........................................................................228128.8860.003.5065.38
...............................AGCGAGGTATAGACTTCCTACG...........................................................................228127.6360.0010.2557.38
...............................AGCGAGCTATAGAGTTCCTACG...........................................................................228126.7557.752.2566.75
...............................AGCGAGGTATAGATTTCCTACG...........................................................................228123.7530.383.8889.50
...............................AGCGAGGTATAGAGTTCCTATG...........................................................................228117.3838.886.5072.00
...............................AGCGAGGTATAGAGTTCCTGCG...........................................................................228112.2548.133.0061.13
...............................AGCGAGGTATAGAGTTACTACG...........................................................................228107.5026.383.0078.13
...................................................................CTAGGAACTTCATACCGTGCTCT......................................238107.386.2517.8883.25
.................................CGAGGTATAGAGTTCCTACG...........................................................................20899.7560.132.7536.88
...............................AGCGAGTTATAGAGTTCCTACG...........................................................................22896.7528.132.3866.25
....................................................................TAGGAACTTCATACCGTGCTCTA.....................................23893.6312.504.1377.00
...............................AGCGACGTATAGAGTTCCTACG...........................................................................22893.3844.380.7548.25
...............................AGCGAGGTATAGAGTTTCTACG...........................................................................22890.0032.886.6350.50
...............................AGCCAGGTATAGAGTTCCTACG...........................................................................22889.6346.381.6341.63
...............................AGCGAGGTATAAAGTTCCTACG...........................................................................22886.2533.883.8848.50
...............................AGCGTGGTATAGAGTTCCTACG...........................................................................22876.0041.753.2531.00
...............................AGCGAGGTCTAGAGTTCCTACG...........................................................................22874.0041.002.0031.00
....................................................................TAGGAACTTCATACCGTGCTCTTT....................................24870.5016.251.1353.13
....................................................................TAGGAGCTTCATACCGTGCTCT......................................22868.634.138.7555.75
....................................................................TAGGAACTTCATACCTTGCTCT......................................22866.888.6310.3847.88
....................................................................TAGGAACTTCATACCGTGATCT......................................22865.7534.380.5030.88
...............................AGCGAGGTATAGAGTTCTTACG...........................................................................22864.1324.885.7533.50
...............................AGCGAGGTATAGAGTTCCTACGTT.........................................................................24861.5035.630.0025.88
...............................AGCGAGGTTTAGAGTTCCTACG...........................................................................22858.2519.136.1333.00
...............................AGCGAGGTATAGAATTCCTACG...........................................................................22858.1325.002.0031.13
...............................AGCGAGGTATTGAGTTCCTACG...........................................................................22855.3821.255.6328.50
....................................................................TAGGAACTTAATACCGTGCTCTT.....................................23855.131.880.2553.00
....................................................................TAGGAACTTCATACTGTGCTCT......................................22852.882.1328.8821.88
....................................................................TAGGCACTTCATACCGTGCTCT......................................22851.7510.507.0034.25
....................................................................TAGGAACTTCATACCGTGCCCT......................................22848.385.256.7536.38
....................................................................TAGGAACTTCATACCGTGCTT.......................................21846.3813.500.1332.75
....................................................................TAGTAACTTCATACCGTGCTCT......................................22846.253.004.1339.13
...............................AGCGAGGTATAGAGTTCC...............................................................................18846.001.001.3843.63
....................................................................TATGAACTTCATACCGTGCTCT......................................22846.003.634.0038.38
...............................CGCGAGGTATAGAGTTCCTACG...........................................................................22845.5024.000.5021.00
....................................................................TAGGAACTTCATACCGTGCTCC......................................22845.387.636.7531.00
..............................CAGCGAGGTATAGAGTTCCTACG...........................................................................23845.0019.751.3823.88
...............................AGCGAxGTATAGAGTTCCTACG...........................................................................21844.5019.134.0021.38
...............................AGCGAGGTATAGAGTTCCTACGA..........................................................................23843.6327.380.2516.00
....................................................................TAGGAACTTCATACCGCGCTCT......................................22843.136.0012.6324.50
....................................................................TAGGAAATTCATACCGTGCTCT......................................22842.751.001.8839.88
....................................................................TAGGAACTTCATACCGTGTTCT......................................22842.1324.009.758.38
...............................AGCGAGGTATAGAGTTCCTTT............................................................................21834.8816.500.0018.38
....................................................................TAGGAACTTCGTACCGTGCTCT......................................22834.633.507.6323.50
...............................AGCGAGGTATAGAGTTCCTACGC..........................................................................23833.6312.880.8819.88
....................................................................TAGGGACTTCATACCGTGCTCT......................................22832.635.508.1319.00
....................................................................TACGAACTTCATACCGTGCTCT......................................22832.382.753.5026.13
....................................................................TAGCAACTTCATACCGTGCTCT......................................22832.382.882.3827.13
...............................AGCGAGGTATAGAGTTCGTACG...........................................................................22831.7512.000.6319.13
....................................................................TAGGAACCTCATACCGTGCTCT......................................22831.134.007.7519.38
..................................GAGGTATAGAGTTCCTACG...........................................................................19830.758.751.2520.75
....................................................................TAGGAACTTCATACCGTTCTCT......................................22830.003.504.5022.00
....................................................................TAGGAACTTCACACCGTGCTCT......................................22829.634.506.1319.00


droYak2 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 chr3L:10348871-10348998 + 97.67
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
GCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
....................................................................TAGGAACTTCATACCGTGCTCT......................................22864887.502548.758200.501258.0015320.8837559.38
...............................AGCGAGGTATAGAGTTCCTACG...........................................................................22834411.133437.884156.8817686.509111.7518.13
....................................................................TAGGAACTTAATACCGTGCTCT......................................22821871.2516.25796.1311.631972.2519075.00
....................................................................TAGGAACTTCATACCGTGCTC.......................................2188113.508.751441.13112.382768.253783.00
....................................................................TAGGAACTTCATACCGTGCTCC......................................2286675.132.0011.132.1324.886635.00
....................................................................TAGGAACTTAATACCGTGCTCC......................................2283270.130.131.500.003.133265.38
....................................................................TAGGAACTTAATACCGTGCTC.......................................2182099.500.38181.252.88468.751446.25
....................................................................TAGGAACTTCATACCGTGCT........................................2081259.251.75135.3814.63256.75850.75
....................................................................TAGGAACTTCATACCGTGCTCG......................................2281082.000.885.250.2511.131064.50
....................................................................TAGGAACTTCATACCGTGCTCTT.....................................238609.636.50131.7523.13254.75193.50
................................GCGAGGTATAGAGTTCCTACG...........................................................................218580.2523.7552.88396.13107.130.38
....................................................................TAGGAACTTAATACCGTGCTCG......................................228521.630.000.630.003.25517.75
....................................................................TAGGAACTTAATACCGTGCT........................................208352.750.0011.130.0030.63311.00
...............................AGCGAGGTATAGAGTTCCTAC............................................................................218260.750.8841.63109.63107.381.25
...............................AGCGAGGGATAGAGTTCCTACG...........................................................................228214.8813.8824.139.50167.380.00
...............................AGCGAGGTATAGAGTTCCTCCG...........................................................................228182.0010.5023.008.63139.880.00
....................................................................TAGGAACTTCATACCGCGCTCT......................................228177.387.6333.632.13110.5023.50
...............................AGCGAGGTATAGAGTTCCT..............................................................................198169.130.3830.5050.8884.752.63
....................................................................TAGGAACTTCATACCGTGCC........................................208147.250.000.250.000.13146.88
...............................AGCGAGGTATAGAGTTCCTACGT..........................................................................238145.750.2535.0044.2566.000.25
....................................................................TAGGAACTTCATACCTTGCTCT......................................228138.751.259.132.3830.6395.38
....................................................................TAGGAACTTAATACCGTGCTCTT.....................................238134.000.0012.000.2531.8889.88
....................................................................TAGGGACTTCATACCGTGCTCT......................................228133.635.8822.631.1383.8820.13
...............................AGCGAGGTATAGCGTTCCTACG...........................................................................228119.138.886.8855.5047.880.00
....................................................................TAGGAGCTTCATACCGTGCTCT......................................228116.503.6323.000.7572.8816.25
....................................................................TAGGAACTTAATACCTTGCTCT......................................228115.880.001.130.003.50111.25
...............................AGCGAGGCATAGAGTTCCTACG...........................................................................228114.756.887.2536.7563.880.00
...............................AGCGAGGTATAGAGTTCCTA.............................................................................208109.880.3819.1343.1347.000.25
...............................AGCGAGGTATAGAGTTCCTACT...........................................................................228107.633.1318.7529.2556.000.50
....................................................................TAGGAACTTCATACCGGGCTCT......................................228103.382.3811.132.5046.2541.13
...............................AGCGCGGTATAGAGTTCCTACG...........................................................................22896.256.258.5011.5070.000.00
....................................................................TAGCAACTTCATACCGTGCTCT......................................22895.132.0021.630.5065.006.00
....................................................................TGGGAACTTCATACCGTGCTCT......................................22888.132.889.500.5044.1331.13
...............................AGCGAGGTATAGAGCTCCTACG...........................................................................22886.2510.1314.0016.0046.130.00
....................................................................TAGGAACGTCATACCGTGCTCT......................................22884.131.6311.630.0070.000.88
....................................................................TAGGAACTTCATACCGTGCCCT......................................22883.383.3812.252.7518.5046.50
...................................................................CTAGGAACTTCATACCGTGCTCT......................................23880.386.8817.251.7543.6310.88
....................................................................TAGGAACTTCCTACCGTGCTCT......................................22879.887.0012.750.6358.501.00
....................................................................TAGGCACTTCATACCGTGCTCT......................................22878.253.758.501.7559.135.13
....................................................................TAGGAACTTCATACCGTTCTCT......................................22878.001.8825.632.2532.3815.88
....................................................................TAGGAAATTCATACCGTGCTCT......................................22875.637.1310.130.3848.759.25
....................................................................TAGGAACTTCATACAGTGCTCT......................................22872.884.758.631.0036.5022.00
....................................................................TAGGAACTTCGTACCGTGCTCT......................................22871.254.1314.751.0036.7514.63
...............................AGCGGGGTATAGAGTTCCTACG...........................................................................22868.756.508.6312.7540.880.00
....................................................................TAGGTACTTCATACCGTGCTCT......................................22865.634.7513.250.1345.751.75
....................................................................TAGGAACTTCATACCGTGCTCTA.....................................23865.380.2515.252.6329.0018.25
...............................AGCGAGGAATAGAGTTCCTACG...........................................................................22865.132.881.3834.0026.880.00
....................................................................TAGGAACTTCATACCATGCTCT......................................22865.003.7514.751.1323.5021.88
....................................................................TATGAACTTCATACCGTGCTCT......................................22864.500.634.630.8810.6347.75
...............................AGCGAGGTATAGAGGTCCTACG...........................................................................22863.1311.0011.382.7538.000.00
....................................................................TAGGAACTTCATACCGAGCTCT......................................22862.882.638.630.1346.754.75
....................................................................TAGGAACTTCATACCGTGCTT.......................................21862.630.1313.381.8821.7525.50
....................................................................TAGGAACTTCAGACCGTGCTCT......................................22858.002.137.880.0048.000.00
....................................................................TAGGAACTTCATAACGTGCTCT......................................22855.004.5019.500.0028.752.25
....................................................................TAGGAACTTCATGCCGTGCTCT......................................22850.752.504.750.3814.6328.50
....................................................................TAGGAACTTAATACCGTGCC........................................20850.500.000.000.000.0050.50
...............................AGCGAGGTATAGAGTTACTACG...........................................................................22850.509.258.882.3830.000.00
....................................................................TAGGAACTTCATACTGTGCTCT......................................22850.252.637.131.3814.6324.50
...............................AGCGAGGTATCGAGTTCCTACG...........................................................................22849.503.503.7511.2531.000.00
....................................................................TAGGAACTTAATACCxTGCTCT......................................21847.880.000.000.000.2547.63
....................................................................TAGGAACTTCATACCGTGC.........................................19847.250.130.750.001.5044.88
...............................AGAGAGGTATAGAGTTCCTACG...........................................................................22847.007.757.505.2526.500.00
....................................................................TAGGAACTTCACACCGTGCTCT......................................22847.003.0010.130.5020.2513.13
....................................................................TAGGAACTTCATACCCTGCTCT......................................22845.750.757.130.3820.8816.63
....................................................................TAAGAACTTCATACCGTGCTCT......................................22844.753.3817.500.1316.637.13
...............................AGCGAGGTATAGAGTTCCTAAG...........................................................................22844.1314.507.503.8818.250.00
...............................AGCGAGGTATAGAGTTCCTACC...........................................................................22844.002.134.5019.5017.880.00
....................................................................TAGGAACCTCATACCGTGCTCT......................................22843.882.889.380.7514.6316.25
....................................................................TAGGAACTTTATACCGTGCTCT......................................22843.882.005.750.3815.2520.50
....................................................................CAGGAACTTCATACCGTGCTCT......................................22843.501.388.130.8820.3812.75
....................................................................TAGGAACTTCATACCGTCCTCT......................................22842.251.003.751.2526.0010.25
...............................AGCGAGGTATAGAGTTCCTATG...........................................................................22841.754.505.135.8826.130.13
....................................................................TAGGAACTTCATACCxTGCTCT......................................21841.000.000.130.880.3839.63
....................................................................TAGGAACTTCATACCGTGATCT......................................22841.004.638.750.1317.639.88
....................................................................TAGGAACTTCATCCCGTGCTCT......................................22839.632.135.380.8828.632.63
...............................AGCGAGGTATAGAGTTCCTACA...........................................................................22839.502.637.0016.6313.250.00
...............................AGCGAGGTATAGAGTTCCGACG...........................................................................22839.385.136.250.8827.130.00
...............................AGCGAGGTATAGTGTTCCTACG...........................................................................22839.133.003.881.3830.880.00
...............................AGCGAGGTATAGAGTTCC...............................................................................18838.880.139.630.3826.252.50
....................................................................TAGGAACTTCATACCGTGCG........................................20838.250.000.130.000.1338.00
...............................AGCGAGGTATAGAGTCCCTACG...........................................................................22837.883.753.6316.5014.000.00
....................................................................TAGGAACTTCATACCGTACTCT......................................22837.501.136.380.5014.7514.75
....................................................................TAGGAACTTCATACCGTGCGCT......................................22837.251.633.630.2527.254.50
...............................AGCGAGGTGTAGAGTTCCTACG...........................................................................22836.384.136.2514.5011.500.00
...............................AGCGAGGTATAGGGTTCCTACG...........................................................................22836.134.504.6313.2513.750.00
....................................................................TACGAACTTCATACCGTGCTCT......................................22836.130.383.750.257.6324.13
...............................AGCGAGGTATAGAGATCCTACG...........................................................................22835.757.505.382.1320.750.00
....................................................................TAGGAACTCCATACCGTGCTCT......................................22834.751.756.251.6313.6311.50
...............................AGCGAGGTATAGAGTTCCCACG...........................................................................22834.383.884.7512.6313.130.00
....................................................................TAGGAACTTCATACCGTGCTAT......................................22834.134.507.500.0013.388.75
....................................................................TAGGACCTTCATACCGTGCTCT......................................22833.000.633.750.2525.882.50
....................................................................TATGAACTTAATACCGTGCTCT......................................22832.880.000.380.001.7530.75
...............................AGCGAGGTATAGAGTTCATACG...........................................................................22832.385.884.882.3819.250.00
...............................AGCGAGGTACAGAGTTCCTACG...........................................................................22832.132.254.0014.3811.500.00
....................................................................TAGGAACTTAATACCGGGCTCT......................................22831.630.131.250.006.5023.75
...............................AGCGAGGTATGGAGTTCCTACG...........................................................................22831.133.004.7510.3813.000.00
....................................................................TCGGAACTTCATACCGTGCTCT......................................22830.751.634.500.1323.501.00
...............................AGCGAGGTATATAGTTCCTACG...........................................................................22830.131.132.755.5020.750.00
...............................AGCGTGGTATAGAGTTCCTACG...........................................................................22829.753.632.383.7520.000.00
....................................................................AAGGAACTTCATACCGTGCTCT......................................22829.131.255.380.3819.752.38
....................................................................TAGGAACTGCATACCGTGCTCT......................................22828.750.383.130.0024.131.13
3 chr3L:10302157-10302251 + 53.76
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC--CAAGTGAATGCAAAAATCC
--------------------TTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCC-TATTCAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGACTGTCGACCATCATAAAGT--------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
....................................................................TAGGAACTTCATACCGTGCTCT........................................22864887.502548.758200.501258.0015320.8837559.38
...............................AGCGAGGTATAGAGTTCCTACG.............................................................................22834411.133437.884156.8817686.509111.7518.13
....................................................................TAGGAACTTAATACCGTGCTCT........................................22821871.2516.25796.1311.631972.2519075.00
....................................................................TAGGAACTTCATACCGTGCTC.........................................2188113.508.751441.13112.382768.253783.00
....................................................................TAGGAACTTCATACCGTGCTCC........................................2286675.132.0011.132.1324.886635.00
....................................................................TAGGAACTTAATACCGTGCTCC........................................2283270.130.131.500.003.133265.38
....................................................................TAGGAACTTAATACCGTGCTC.........................................2182099.500.38181.252.88468.751446.25
....................................................................TAGGAACTTCATACCGTGCT..........................................2081259.251.75135.3814.63256.75850.75
....................................................................TAGGAACTTCATACCGTGCTCG........................................2281082.000.885.250.2511.131064.50
....................................................................TAGGAACTTCATACCGTGCTCTT.......................................238609.636.50131.7523.13254.75193.50
................................GCGAGGTATAGAGTTCCTACG.............................................................................218580.2523.7552.88396.13107.130.38
....................................................................TAGGAACTTAATACCGTGCTCG........................................228521.630.000.630.003.25517.75
....................................................................TAGGAACTTAATACCGTGCT..........................................208352.750.0011.130.0030.63311.00
...............................AGCGAGGTATAGAGTTCCTAC..............................................................................218260.750.8841.63109.63107.381.25
...............................AGCGAGGGATAGAGTTCCTACG.............................................................................228214.8813.8824.139.50167.380.00
...............................AGCGAGGTATAGAGTTCCTCCG.............................................................................228182.0010.5023.008.63139.880.00
....................................................................TAGGAACTTCATACCGCGCTCT........................................228177.387.6333.632.13110.5023.50
...............................AGCGAGGTATAGAGTTCCT................................................................................198169.130.3830.5050.8884.752.63
....................................................................TAGGAACTTCATACCGTGCC..........................................208147.250.000.250.000.13146.88
...............................AGCGAGGTATAGAGTTCCTACGT............................................................................238145.750.2535.0044.2566.000.25
....................................................................TAGGAACTTCATACCTTGCTCT........................................228138.751.259.132.3830.6395.38
....................................................................TAGGAACTTAATACCGTGCTCTT.......................................238134.000.0012.000.2531.8889.88
....................................................................TAGGGACTTCATACCGTGCTCT........................................228133.635.8822.631.1383.8820.13
...............................AGCGAGGTATAGCGTTCCTACG.............................................................................228119.138.886.8855.5047.880.00
....................................................................TAGGAGCTTCATACCGTGCTCT........................................228116.503.6323.000.7572.8816.25
....................................................................TAGGAACTTAATACCTTGCTCT........................................228115.880.001.130.003.50111.25
...............................AGCGAGGCATAGAGTTCCTACG.............................................................................228114.756.887.2536.7563.880.00
...............................AGCGAGGTATAGAGTTCCTA...............................................................................208109.880.3819.1343.1347.000.25
...............................AGCGAGGTATAGAGTTCCTACT.............................................................................228107.633.1318.7529.2556.000.50
....................................................................TAGGAACTTCATACCGGGCTCT........................................228103.382.3811.132.5046.2541.13
...............................AGCGCGGTATAGAGTTCCTACG.............................................................................22896.256.258.5011.5070.000.00
....................................................................TAGCAACTTCATACCGTGCTCT........................................22895.132.0021.630.5065.006.00
....................................................................TGGGAACTTCATACCGTGCTCT........................................22888.132.889.500.5044.1331.13
...............................AGCGAGGTATAGAGCTCCTACG.............................................................................22886.2510.1314.0016.0046.130.00
....................................................................TAGGAACGTCATACCGTGCTCT........................................22884.131.6311.630.0070.000.88
....................................................................TAGGAACTTCATACCGTGCCCT........................................22883.383.3812.252.7518.5046.50
...................................................................CTAGGAACTTCATACCGTGCTCT........................................23880.386.8817.251.7543.6310.88
....................................................................TAGGAACTTCCTACCGTGCTCT........................................22879.887.0012.750.6358.501.00
....................................................................TAGGCACTTCATACCGTGCTCT........................................22878.253.758.501.7559.135.13
....................................................................TAGGAACTTCATACCGTTCTCT........................................22878.001.8825.632.2532.3815.88
....................................................................TAGGAAATTCATACCGTGCTCT........................................22875.637.1310.130.3848.759.25
....................................................................TAGGAACTTCATACAGTGCTCT........................................22872.884.758.631.0036.5022.00
....................................................................TAGGAACTTCGTACCGTGCTCT........................................22871.254.1314.751.0036.7514.63
...............................AGCGGGGTATAGAGTTCCTACG.............................................................................22868.756.508.6312.7540.880.00
....................................................................TAGGTACTTCATACCGTGCTCT........................................22865.634.7513.250.1345.751.75
....................................................................TAGGAACTTCATACCGTGCTCTA.......................................23865.380.2515.252.6329.0018.25
...............................AGCGAGGAATAGAGTTCCTACG.............................................................................22865.132.881.3834.0026.880.00
....................................................................TAGGAACTTCATACCATGCTCT........................................22865.003.7514.751.1323.5021.88
....................................................................TATGAACTTCATACCGTGCTCT........................................22864.500.634.630.8810.6347.75
...............................AGCGAGGTATAGAGGTCCTACG.............................................................................22863.1311.0011.382.7538.000.00
....................................................................TAGGAACTTCATACCGAGCTCT........................................22862.882.638.630.1346.754.75
....................................................................TAGGAACTTCATACCGTGCTT.........................................21862.630.1313.381.8821.7525.50
....................................................................TAGGAACTTCAGACCGTGCTCT........................................22858.002.137.880.0048.000.00
....................................................................TAGGAACTTCATAACGTGCTCT........................................22855.004.5019.500.0028.752.25
....................................................................TAGGAACTTCATGCCGTGCTCT........................................22850.752.504.750.3814.6328.50
...............................AGCGAGGTATAGAGTTACTACG.............................................................................22850.509.258.882.3830.000.00
....................................................................TAGGAACTTAATACCGTGCC..........................................20850.500.000.000.000.0050.50
....................................................................TAGGAACTTCATACTGTGCTCT........................................22850.252.637.131.3814.6324.50
...............................AGCGAGGTATCGAGTTCCTACG.............................................................................22849.503.503.7511.2531.000.00
....................................................................TAGGAACTTAATACCxTGCTCT........................................21847.880.000.000.000.2547.63
....................................................................TAGGAACTTCATACCGTGC...........................................19847.250.130.750.001.5044.88
...............................AGAGAGGTATAGAGTTCCTACG.............................................................................22847.007.757.505.2526.500.00
....................................................................TAGGAACTTCACACCGTGCTCT........................................22847.003.0010.130.5020.2513.13
....................................................................TAGGAACTTCATACCCTGCTCT........................................22845.750.757.130.3820.8816.63
....................................................................TAAGAACTTCATACCGTGCTCT........................................22844.753.3817.500.1316.637.13
...............................AGCGAGGTATAGAGTTCCTAAG.............................................................................22844.1314.507.503.8818.250.00
...............................AGCGAGGTATAGAGTTCCTACC.............................................................................22844.002.134.5019.5017.880.00
....................................................................TAGGAACTTTATACCGTGCTCT........................................22843.882.005.750.3815.2520.50
....................................................................TAGGAACCTCATACCGTGCTCT........................................22843.882.889.380.7514.6316.25
....................................................................CAGGAACTTCATACCGTGCTCT........................................22843.501.388.130.8820.3812.75
....................................................................TAGGAACTTCATACCGTCCTCT........................................22842.251.003.751.2526.0010.25
...............................AGCGAGGTATAGAGTTCCTATG.............................................................................22841.754.505.135.8826.130.13
....................................................................TAGGAACTTCATACCxTGCTCT........................................21841.000.000.130.880.3839.63
....................................................................TAGGAACTTCATACCGTGATCT........................................22841.004.638.750.1317.639.88
....................................................................TAGGAACTTCATCCCGTGCTCT........................................22839.632.135.380.8828.632.63
...............................AGCGAGGTATAGAGTTCCTACA.............................................................................22839.502.637.0016.6313.250.00
...............................AGCGAGGTATAGAGTTCCGACG.............................................................................22839.385.136.250.8827.130.00
...............................AGCGAGGTATAGTGTTCCTACG.............................................................................22839.133.003.881.3830.880.00
...............................AGCGAGGTATAGAGTTCC.................................................................................18838.880.139.630.3826.252.50
....................................................................TAGGAACTTCATACCGTGCG..........................................20838.250.000.130.000.1338.00
...............................AGCGAGGTATAGAGTCCCTACG.............................................................................22837.883.753.6316.5014.000.00
....................................................................TAGGAACTTCATACCGTACTCT........................................22837.501.136.380.5014.7514.75
....................................................................TAGGAACTTCATACCGTGCGCT........................................22837.251.633.630.2527.254.50
...............................AGCGAGGTGTAGAGTTCCTACG.............................................................................22836.384.136.2514.5011.500.00
....................................................................TACGAACTTCATACCGTGCTCT........................................22836.130.383.750.257.6324.13
...............................AGCGAGGTATAGGGTTCCTACG.............................................................................22836.134.504.6313.2513.750.00
...............................AGCGAGGTATAGAGATCCTACG.............................................................................22835.757.505.382.1320.750.00
....................................................................TAGGAACTCCATACCGTGCTCT........................................22834.751.756.251.6313.6311.50
...............................AGCGAGGTATAGAGTTCCCACG.............................................................................22834.383.884.7512.6313.130.00
....................................................................TAGGAACTTCATACCGTGCTAT........................................22834.134.507.500.0013.388.75
....................................................................TAGGACCTTCATACCGTGCTCT........................................22833.000.633.750.2525.882.50
....................................................................TATGAACTTAATACCGTGCTCT........................................22832.880.000.380.001.7530.75
...............................AGCGAGGTATAGAGTTCATACG.............................................................................22832.385.884.882.3819.250.00
...............................AGCGAGGTACAGAGTTCCTACG.............................................................................22832.132.254.0014.3811.500.00
....................................................................TAGGAACTTAATACCGGGCTCT........................................22831.630.131.250.006.5023.75
...............................AGCGAGGTATGGAGTTCCTACG.............................................................................22831.133.004.7510.3813.000.00
....................................................................TCGGAACTTCATACCGTGCTCT........................................22830.751.634.500.1323.501.00
...............................AGCGAGGTATATAGTTCCTACG.............................................................................22830.131.132.755.5020.750.00
...............................AGCGTGGTATAGAGTTCCTACG.............................................................................22829.753.632.383.7520.000.00
....................................................................AAGGAACTTCATACCGTGCTCT........................................22829.131.255.380.3819.752.38
....................................................................TAGGAACTGCATACCGTGCTCT........................................22828.750.383.130.0024.131.13


droEre2 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 scaffold_4784:10353122-10353248 + 97.66
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
GCAAGATATT-TTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
....................................................................TAGGAACTTCATACCGTGCTCT......................................22852981.752078.0010375.630.0040528.13
...............................AGCGAGGTATAGAGTTCCTACG...........................................................................22811350.251137.25436.630.009776.38
....................................................................TAGGAACTTCATACCGTGCTC.......................................2185821.1312.131345.500.004463.50
....................................................................TAGGAACTTAATACCGTGCTCT......................................2284429.6316.75830.380.003582.50
....................................................................TAGGAACTTAATACCGTGCTC.......................................218850.000.25157.130.00692.63
....................................................................TATGAACTTCATACCGTGCTCT......................................228532.136.132.000.00524.00
....................................................................TAGGAACTTCATACCGTGCTCTT.....................................238479.632.88101.130.00375.63
....................................................................TAGGAACTTCATACCGTGCT........................................208437.631.50106.500.00329.63
....................................................................TAGGAACTTCATACAGTGCTCT......................................228389.502.2516.380.00370.88
....................................................................TAGGAACTTCATACCGTGCTAT......................................228356.632.6311.750.00342.25
....................................................................TAGTAACTTCATACCGTGCTCT......................................228285.756.884.130.00274.75
....................................................................TAGGAACTTCATACCGTTCTCT......................................228203.0023.2522.750.00157.00
....................................................................TAGGAACTTCATACCGTGATCT......................................228196.502.3814.750.00179.38
...............................AGCGAGGTATAGAGTTCCT..............................................................................198172.000.6320.000.00151.38
...................................................................CTAGGAACTTCATACCGTGCTCT......................................238169.887.5026.500.00135.88
....................................................................TAGGAACTTCATACCTTGCTCT......................................228164.5011.8820.380.00132.25
...............................AGCGAGGTATAGAGTTCCTAC............................................................................218139.633.6333.380.00102.63
....................................................................TAGGAACTTCATACCGCGCTCT......................................228122.8816.5039.750.0066.63
....................................................................TAGGAGCTTCATACCGTGCTCT......................................228115.753.3831.250.0081.13
....................................................................TAAGAACTTCATACCGTGCTCT......................................228107.754.1343.000.0060.63
...............................AGCGAGGTATATAGTTCCTACG...........................................................................228107.388.130.500.0098.75
....................................................................TAGGCACTTCATACCGTGCTCT......................................228106.755.6317.380.0083.75
....................................................................TAGGAAATTCATACCGTGCTCT......................................22895.383.5014.880.0077.00
...............................AGCTAGGTATAGAGTTCCTACG...........................................................................22893.502.380.000.0091.13
....................................................................TAGGAACTTCATAACGTGCTCT......................................22891.502.8811.000.0077.63
................................GCGAGGTATAGAGTTCCTACG...........................................................................21890.136.754.000.0079.38
...............................AGCGATGTATAGAGTTCCTACG...........................................................................22887.384.380.500.0082.50
...............................AGCGAGGTATAGAGTTCATACG...........................................................................22886.380.750.630.0085.00
...............................AGCGAGGTATAGAGTTCCTA.............................................................................20876.750.6318.880.0057.25
....................................................................TAGGAACTTCATACTGTGCTCT......................................22876.632.6317.630.0056.38
....................................................................TAGGAACTTCATACCATGCTCT......................................22875.886.6314.000.0055.25
....................................................................TAGGAACTTCATACCGTGCTCC......................................22874.882.0014.130.0058.75
...............................AGCGAGGTATAGAGTTCCTACT...........................................................................22874.3819.382.500.0052.50
...............................AGCGAGGTATAGAGTTCC...............................................................................18871.630.256.380.0065.00
....................................................................TAGCAACTTCATACCGTGCTCT......................................22869.386.0026.880.0036.50
...............................ATCGAGGTATAGAGTTCCTACG...........................................................................22868.503.000.000.0065.50
....................................................................TACGAACTTCATACCGTGCTCT......................................22867.885.383.250.0059.25
....................................................................TAGGGACTTCATACCGTGCTCT......................................22864.385.3819.630.0039.38
...............................AGAGAGGTATAGAGTTCCTACG...........................................................................22861.501.000.630.0059.88
....................................................................TAGGAACTTCATACCGTGCCCT......................................22860.253.3810.380.0046.50
....................................................................TAGGAACTTCGTACCGTGCTCT......................................22857.252.2518.630.0036.38
...............................AGCGAGGTATAGAGTTACTACG...........................................................................22854.882.750.880.0051.25
....................................................................TATGAACTTCATACCGTGCTC.......................................21854.880.130.380.0054.38
....................................................................TAGGAACTTCATACCGTCCTCT......................................22854.386.258.880.0039.25
....................................................................TAGGAACTTCATACCGTGCTCTA.....................................23853.630.6311.380.0041.63
....................................................................TAGGAACCTCATACCGTGCTCT......................................22852.252.008.630.0041.63
....................................................................TAGGAACTTCACACCGTGCTCT......................................22850.133.5010.750.0035.88
....................................................................TAGGAACTTCATACCCTGCTCT......................................22848.256.388.500.0033.38
....................................................................CAGGAACTTCATACCGTGCTCT......................................22848.255.137.630.0035.50
....................................................................TAGGAACTCCATACCGTGCTCT......................................22847.251.755.750.0039.75
....................................................................TAGAAACTTCATACCGTGCTCT......................................22844.883.136.130.0035.63
....................................................................TATGAACTTAATACCGTGCTCT......................................22844.880.000.250.0044.63
....................................................................TAGGAACTTCATACAGTGCTC.......................................21844.250.001.750.0042.50
....................................................................TGGGAACTTCATACCGTGCTCT......................................22843.752.6311.130.0030.00
....................................................................TAGGAACTTCATACCGTACTCT......................................22843.383.5011.250.0028.63
...............................AGCGAGGTATAGAGTTCCTACGT..........................................................................23842.500.132.130.0040.25
....................................................................TAGGAACTTCATACCGTGCTA.......................................21841.750.004.000.0037.75
....................................................................TAGGAACTTAATACCGTGCT........................................20841.130.0010.750.0030.38
....................................................................TAGGAACTTCCTACCGTGCTCT......................................22840.755.5014.380.0020.88
....................................................................TAGGAACTTCATACCGTGCTCTTT....................................24839.000.007.130.0031.88
....................................................................TAGGAACTTCATACCGGGCTCT......................................22838.887.2513.000.0018.63
....................................................................TAGGAACTTAATACAGTGCTCT......................................22837.500.001.380.0036.13
....................................................................TAGGAACTTTATACCGTGCTCT......................................22836.002.636.000.0027.38
....................................................................TAGGAACTTCATATCGTGCTCT......................................22835.132.137.750.0025.25
....................................................................TAGGAACTTCATGCCGTGCTCT......................................22833.501.757.880.0023.88
....................................................................TCGGAACTTCATACCGTGCTCT......................................22833.001.636.880.0024.50
...............................AGCGAGGCATAGAGTTCCTACG...........................................................................22832.756.751.380.0024.63
...............................AGCGCGGTATAGAGTTCCTACG...........................................................................22832.383.130.750.0028.50
....................................................................TAGGAACTTCATACCGAGCTCT......................................22831.505.0016.750.009.75
....................................................................TAGGAACTTAATACCGTGCTAT......................................22830.880.001.500.0029.38
...............................AGCGAGGTATAGAGTTCCTAAG...........................................................................22830.001.750.880.0027.38
....................................................................TAGGAACTTAATACCGTGCTCTT.....................................23829.880.006.130.0023.75
....................................................................TAGTAACTTCATACCGTGCTC.......................................21829.250.130.500.0028.63
...............................AGCGAGGTATAGATTTCCTACG...........................................................................22829.253.500.130.0025.63
....................................................................TAGGAACTTCATACCGTGCTTT......................................22828.131.387.500.0019.25
....................................................................TAGGAATTTCATACCGTGCTCT......................................22828.001.134.130.0022.75
....................................................................TAGTAACTTAATACCGTGCTCT......................................22825.880.130.750.0025.00
....................................................................TAGGAACTTCATACCGTTCTC.......................................21825.500.003.250.0022.25
....................................................................TAGGAACTTCATCCCGTGCTCT......................................22825.502.009.000.0014.50
....................................................................TAGGAACTTCATACCGTGTTCT......................................22825.381.136.000.0018.25
....................................................................TAGGAACTTCATACCGTGCTT.......................................21825.250.006.130.0019.13
.....................................................................TAGAACTTCATACCGTGCTCT......................................21448.750.002.250.0046.50
....................................................................TAGGAACTTCATACCGTGCTCTG.....................................23824.380.134.380.0019.88
....................................................................TAGGTACTTCATACCGTGCTCT......................................22824.003.3811.500.009.13
....................................................................TAGGACCTTCATACCGTGCTCT......................................22824.002.884.880.0016.25
......................................................................TGAACTTCATACCGTGCTCT......................................20823.500.000.130.0023.38
...............................AGCGAGTTATAGAGTTCCTACG...........................................................................22823.003.750.000.0019.25
....................................................................TAGGAACTTCATACCGTGATC.......................................21822.380.001.750.0020.63
....................................................................TAGGAACTTCATACCGTGCTCTC.....................................23822.130.755.750.0015.63
.....................................................................AGGAACTTCATACCGTGCTCT......................................21821.881.002.880.0018.00
....................................................................TAGGAACGTCATACCGTGCTCT......................................22821.752.7518.000.001.00
...............................AGCGAGGTATAGAGCTCCTACG...........................................................................22821.255.750.630.0014.88
....................................................................TAGGAACTTCATACCTTGCTC.......................................21821.250.001.750.0019.50
...............................AGCGAGGGATAGAGTTCCTACG...........................................................................22821.138.882.630.009.63
....................................................................TAGGAACTTAATACCGTTCTCT......................................22820.130.251.750.0018.13
...............................AGCGAGGTATAGAGTTCCTCCG...........................................................................22820.005.883.630.0010.50
....................................................................TAGGAACTTCATACCGTGC.........................................19819.880.131.250.0018.50
...............................AGCGAGGTATAGAGTTCCTACC...........................................................................22818.885.380.750.0012.75
...................................................................CTAGGAACTTCATACCGTGCTC.......................................22818.130.003.880.0014.25
....................................................................TAGGAACTTAATACCGTGATCT......................................22817.630.131.380.0016.13
...............................AGCGAGGTATAGAGTTCCTACA...........................................................................22817.501.881.630.0014.00
2 scaffold_4784:10306193-10306287 + 53.76
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC--CAAGTGAATGCAAAAATCC
--------------------TTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCC-TATTCAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGACTGTCGACCATCATAAAGT--------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
....................................................................TAGGAACTTCATACCGTGCTCT........................................22852981.752078.0010375.630.0040528.13
...............................AGCGAGGTATAGAGTTCCTACG.............................................................................22811350.251137.25436.630.009776.38
....................................................................TAGGAACTTCATACCGTGCTC.........................................2185821.1312.131345.500.004463.50
....................................................................TAGGAACTTAATACCGTGCTCT........................................2284429.6316.75830.380.003582.50
....................................................................TAGGAACTTAATACCGTGCTC.........................................218850.000.25157.130.00692.63
....................................................................TATGAACTTCATACCGTGCTCT........................................228532.136.132.000.00524.00
....................................................................TAGGAACTTCATACCGTGCTCTT.......................................238479.632.88101.130.00375.63
....................................................................TAGGAACTTCATACCGTGCT..........................................208437.631.50106.500.00329.63
....................................................................TAGGAACTTCATACAGTGCTCT........................................228389.502.2516.380.00370.88
....................................................................TAGGAACTTCATACCGTGCTAT........................................228356.632.6311.750.00342.25
....................................................................TAGTAACTTCATACCGTGCTCT........................................228285.756.884.130.00274.75
....................................................................TAGGAACTTCATACCGTTCTCT........................................228203.0023.2522.750.00157.00
....................................................................TAGGAACTTCATACCGTGATCT........................................228196.502.3814.750.00179.38
...............................AGCGAGGTATAGAGTTCCT................................................................................198172.000.6320.000.00151.38
...................................................................CTAGGAACTTCATACCGTGCTCT........................................238169.887.5026.500.00135.88
....................................................................TAGGAACTTCATACCTTGCTCT........................................228164.5011.8820.380.00132.25
...............................AGCGAGGTATAGAGTTCCTAC..............................................................................218139.633.6333.380.00102.63
....................................................................TAGGAACTTCATACCGCGCTCT........................................228122.8816.5039.750.0066.63
....................................................................TAGGAGCTTCATACCGTGCTCT........................................228115.753.3831.250.0081.13
....................................................................TAAGAACTTCATACCGTGCTCT........................................228107.754.1343.000.0060.63
...............................AGCGAGGTATATAGTTCCTACG.............................................................................228107.388.130.500.0098.75
....................................................................TAGGCACTTCATACCGTGCTCT........................................228106.755.6317.380.0083.75
....................................................................TAGGAAATTCATACCGTGCTCT........................................22895.383.5014.880.0077.00
...............................AGCTAGGTATAGAGTTCCTACG.............................................................................22893.502.380.000.0091.13
....................................................................TAGGAACTTCATAACGTGCTCT........................................22891.502.8811.000.0077.63
................................GCGAGGTATAGAGTTCCTACG.............................................................................21890.136.754.000.0079.38
...............................AGCGATGTATAGAGTTCCTACG.............................................................................22887.384.380.500.0082.50
...............................AGCGAGGTATAGAGTTCATACG.............................................................................22886.380.750.630.0085.00
...............................AGCGAGGTATAGAGTTCCTA...............................................................................20876.750.6318.880.0057.25
....................................................................TAGGAACTTCATACTGTGCTCT........................................22876.632.6317.630.0056.38
....................................................................TAGGAACTTCATACCATGCTCT........................................22875.886.6314.000.0055.25
....................................................................TAGGAACTTCATACCGTGCTCC........................................22874.882.0014.130.0058.75
...............................AGCGAGGTATAGAGTTCCTACT.............................................................................22874.3819.382.500.0052.50
...............................AGCGAGGTATAGAGTTCC.................................................................................18871.630.256.380.0065.00
....................................................................TAGCAACTTCATACCGTGCTCT........................................22869.386.0026.880.0036.50
...............................ATCGAGGTATAGAGTTCCTACG.............................................................................22868.503.000.000.0065.50
....................................................................TACGAACTTCATACCGTGCTCT........................................22867.885.383.250.0059.25
....................................................................TAGGGACTTCATACCGTGCTCT........................................22864.385.3819.630.0039.38
...............................AGAGAGGTATAGAGTTCCTACG.............................................................................22861.501.000.630.0059.88
....................................................................TAGGAACTTCATACCGTGCCCT........................................22860.253.3810.380.0046.50
....................................................................TAGGAACTTCGTACCGTGCTCT........................................22857.252.2518.630.0036.38
...............................AGCGAGGTATAGAGTTACTACG.............................................................................22854.882.750.880.0051.25
....................................................................TATGAACTTCATACCGTGCTC.........................................21854.880.130.380.0054.38
....................................................................TAGGAACTTCATACCGTCCTCT........................................22854.386.258.880.0039.25
....................................................................TAGGAACTTCATACCGTGCTCTA.......................................23853.630.6311.380.0041.63
....................................................................TAGGAACCTCATACCGTGCTCT........................................22852.252.008.630.0041.63
....................................................................TAGGAACTTCACACCGTGCTCT........................................22850.133.5010.750.0035.88
....................................................................TAGGAACTTCATACCCTGCTCT........................................22848.256.388.500.0033.38
....................................................................CAGGAACTTCATACCGTGCTCT........................................22848.255.137.630.0035.50
....................................................................TAGGAACTCCATACCGTGCTCT........................................22847.251.755.750.0039.75
....................................................................TAGAAACTTCATACCGTGCTCT........................................22844.883.136.130.0035.63
....................................................................TATGAACTTAATACCGTGCTCT........................................22844.880.000.250.0044.63
....................................................................TAGGAACTTCATACAGTGCTC.........................................21844.250.001.750.0042.50
....................................................................TGGGAACTTCATACCGTGCTCT........................................22843.752.6311.130.0030.00
....................................................................TAGGAACTTCATACCGTACTCT........................................22843.383.5011.250.0028.63
...............................AGCGAGGTATAGAGTTCCTACGT............................................................................23842.500.132.130.0040.25
....................................................................TAGGAACTTCATACCGTGCTA.........................................21841.750.004.000.0037.75
....................................................................TAGGAACTTAATACCGTGCT..........................................20841.130.0010.750.0030.38
....................................................................TAGGAACTTCCTACCGTGCTCT........................................22840.755.5014.380.0020.88
....................................................................TAGGAACTTCATACCGTGCTCTTT......................................24839.000.007.130.0031.88
....................................................................TAGGAACTTCATACCGGGCTCT........................................22838.887.2513.000.0018.63
....................................................................TAGGAACTTAATACAGTGCTCT........................................22837.500.001.380.0036.13
....................................................................TAGGAACTTTATACCGTGCTCT........................................22836.002.636.000.0027.38
....................................................................TAGGAACTTCATATCGTGCTCT........................................22835.132.137.750.0025.25
....................................................................TAGGAACTTCATGCCGTGCTCT........................................22833.501.757.880.0023.88
....................................................................TCGGAACTTCATACCGTGCTCT........................................22833.001.636.880.0024.50
...............................AGCGAGGCATAGAGTTCCTACG.............................................................................22832.756.751.380.0024.63
...............................AGCGCGGTATAGAGTTCCTACG.............................................................................22832.383.130.750.0028.50
....................................................................TAGGAACTTCATACCGAGCTCT........................................22831.505.0016.750.009.75
....................................................................TAGGAACTTAATACCGTGCTAT........................................22830.880.001.500.0029.38
...............................AGCGAGGTATAGAGTTCCTAAG.............................................................................22830.001.750.880.0027.38
....................................................................TAGGAACTTAATACCGTGCTCTT.......................................23829.880.006.130.0023.75
...............................AGCGAGGTATAGATTTCCTACG.............................................................................22829.253.500.130.0025.63
....................................................................TAGTAACTTCATACCGTGCTC.........................................21829.250.130.500.0028.63
....................................................................TAGGAACTTCATACCGTGCTTT........................................22828.131.387.500.0019.25
....................................................................TAGGAATTTCATACCGTGCTCT........................................22828.001.134.130.0022.75
....................................................................TAGTAACTTAATACCGTGCTCT........................................22825.880.130.750.0025.00
....................................................................TAGGAACTTCATACCGTTCTC.........................................21825.500.003.250.0022.25
....................................................................TAGGAACTTCATCCCGTGCTCT........................................22825.502.009.000.0014.50
....................................................................TAGGAACTTCATACCGTGTTCT........................................22825.381.136.000.0018.25
....................................................................TAGGAACTTCATACCGTGCTT.........................................21825.250.006.130.0019.13
....................................................................TAGGAACTTCATACCGTGCTCTG.......................................23824.380.134.380.0019.88
....................................................................TAGGTACTTCATACCGTGCTCT........................................22824.003.3811.500.009.13
....................................................................TAGGACCTTCATACCGTGCTCT........................................22824.002.884.880.0016.25
......................................................................TGAACTTCATACCGTGCTCT........................................20823.500.000.130.0023.38
...............................AGCGAGTTATAGAGTTCCTACG.............................................................................22823.003.750.000.0019.25
....................................................................TAGGAACTTCATACCGTGATC.........................................21822.380.001.750.0020.63
....................................................................TAGGAACTTCATACCGTGCTCTC.......................................23822.130.755.750.0015.63
.....................................................................AGGAACTTCATACCGTGCTCT........................................21821.881.002.880.0018.00
....................................................................TAGGAACGTCATACCGTGCTCT........................................22821.752.7518.000.001.00
...............................AGCGAGGTATAGAGCTCCTACG.............................................................................22821.255.750.630.0014.88
....................................................................TAGGAACTTCATACCTTGCTC.........................................21821.250.001.750.0019.50
...............................AGCGAGGGATAGAGTTCCTACG.............................................................................22821.138.882.630.009.63
....................................................................TAGGAACTTAATACCGTTCTCT........................................22820.130.251.750.0018.13
...............................AGCGAGGTATAGAGTTCCTCCG.............................................................................22820.005.883.630.0010.50
....................................................................TAGGAACTTCATACCGTGC...........................................19819.880.131.250.0018.50
...............................AGCGAGGTATAGAGTTCCTACC.............................................................................22818.885.380.750.0012.75
...................................................................CTAGGAACTTCATACCGTGCTC.........................................22818.130.003.880.0014.25
....................................................................TAGGAACTTAATACCGTGATCT........................................22817.630.131.380.0016.13
...............................AGCGAGGTATAGAGTTCCTACA.............................................................................22817.501.881.630.0014.00
....................................................................TAGGAACTTCATACCxTGCTCT........................................21816.630.130.380.0016.13


droFic1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scf7180000453841:693857-693984 - 96.13
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACAAAGTAAATGCTAAAATCC
SizeHit CountTotal Norm
5 scf7180000453841:740980-741092 - 63.08
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGA---------------------CCAAAAAACAACCAAGTGAATGCAAAAATCC
--------------------TTTTTACCATAAGCGAGGTATAGAGTTCCTACGTTCAA-ATTCAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGTCCATCAAATAAAAACTAAAGACAAACGAAG---------------
SizeHit CountTotal Norm


droEug1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 scf7180000409711:2221453-2221580 + 95.36
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
GCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACAAACTAAATGCAAAAATCC
SizeHit CountTotal Norm
2 scf7180000409711:2174331-2174441 + 63.71
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAA--G--TGAATGCAAAAATCC
--------------------TTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTTC-TATTTAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCATCGTAAAGTTTAAATATTAAAAGTG
SizeHit CountTotal Norm


droBia1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000302428:7389635-7389762 - 96.13
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CCGAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACAAAGTAAATGCAAAAATCC
SizeHit CountTotal Norm
2 scf7180000302428:7436348-7436451 - 62.67
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
--------------------TTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCC-TATTCAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCATCCAA---AACTTGAAAGTGT
SizeHit CountTotal Norm


droTak1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
7 scf7180000415515:147698-147825 - 96.9
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACAAAGTAAATGCAAAAATCC
SizeHit CountTotal Norm
2 scf7180000415209:361657-361762 + 62.71
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC--CAAGTGAATGCAAAAATCC
--------------------TTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCCT-ATTCCGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCATCATAAAGTTGAAACAAAGA---
SizeHit CountTotal Norm


droEle1 - 4 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scf7180000490564:1195760-1195887 + 96.13
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACGAAGTAAATGCAAAAATCT
SizeHit CountTotal Norm
3 scf7180000490564:1146007-1146111 + 65.25
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
--------------------TTTATACCATCAGCGAGGTATAGAGTTCCTACGTTCCC-ATTTAATCGTAGGAACTTAATACCGTGCTCTTGGAGGACTGTCGACCAACATAAAGAATTAACAAAT--
SizeHit CountTotal Norm
1 scf7180000490048:117-221 + 65.25
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
--------------------TTTATACCATCAGCGAGGTATAGAGTTCCTACGTTCCC-ATTTAATCGTAGGAACTTAATACCGTGCTCTTGGAGGACTGTCGACCAACATAAAGAATTAACAAAT--
SizeHit CountTotal Norm
5 scf7180000490751:471259-471378 + 40.71
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATAC---CGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CCTCCATTCCCTTTCCTTTGCTTAATCAATGTGTGTGGTGCAAA-----------CAGGAGAAAGATGTGGGAAGCGGGGGTTGGTGGTTTTTTGGGCGGTAAAATGTCAAATGCGTTGATTGGAAAGCCG
SizeHit CountTotal Norm


droRho1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000778277:12893-13020 + 96.9
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACGAAGTAAATGCAAAAATCC
SizeHit CountTotal Norm
2 scf7180000780105:56683-56790 - 65.27
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC--
---------------------TTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCCT-ATTCAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCAACATAAAGTTTACACAAATAAAG
SizeHit CountTotal Norm


droKik1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000302334:36986-37129 - 72.92
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTC--ATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTG-------------AATGCAAAAATCC-
CCGAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCACATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACAAAGAAAATTTAAGAAAATAATGCAAAGTTCCC
SizeHit CountTotal Norm
3 scf7180000302334:94629-94765 - 53.96
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACC--AAGTG--------------------AATGCAAAAATCC
CGAAGCC-------------TTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCCTCAAATAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCAACATAAAGTGTTTATTATAGAGGAGAAATTAGTGTTTAACTAG
SizeHit CountTotal Norm


droAna3 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scaffold_13337:15233391-15233502 + 66.67
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACT---CGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC---CAAGTGAATGCAAAAATCC
----------------------TTTGCCATCAGCGAGGTATAGAGTTCCTACGTGCCACTTAAACTAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCATCATGAAAGTGTATCCTTAAGTTT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...............................AGCGAGGTATAGAGTTCCTACG.................................................................................228125309.5029741.1388057.637278.13232.63
.......................................................................TAGGAACTTCATACCGTGCTCT.........................................22824715.752889.509296.0012365.00165.25
................................GCGAGGTATAGAGTTCCTACG.................................................................................2188633.505020.633196.88412.253.75
.......................................................................TAGGAACTTCATACCGTGCTC..........................................2184213.88147.132386.251678.132.38
.......................................................................TAGGAACTTAATACCGTGCTCT.........................................2281923.6346.88793.631080.382.75
...............................ATCGAGGTATAGAGTTCCTACG.................................................................................2281572.88303.751264.503.750.88
...............................AGCGAGGTATAGAGTTCCT....................................................................................1981281.00105.501089.3886.000.13
...............................AGCGAGGTATATAGTTCCTACG.................................................................................228839.50209.13615.5013.751.13
...............................AGCGAGGTATAGAGTTCCTACT.................................................................................228678.50140.25488.7543.256.25
...............................AGCGAGGTATAGAGTTCCTAC..................................................................................218668.25155.88377.50134.630.25
...............................AGCGAGGTATAGAGTTCCTAAG.................................................................................228625.38209.00401.3814.380.63
.......................................................................TAGGAACTTCATACCGTGCTCTT........................................238619.1346.38322.88249.500.38
.......................................................................TAGGAACTTAATACCGTGCTC..........................................218594.887.88338.13248.880.00
...............................AGCTAGGTATAGAGTTCCTACG.................................................................................228592.6375.38513.252.501.50
...............................AGCGAGGTATAGAGTTCCTATG.................................................................................228532.88218.50293.7520.500.13
...............................AGCGAGGTATAGAGTTCATACG.................................................................................228406.2553.88331.7520.630.00
...............................AGAGAGGTATAGAGTTCCTACG.................................................................................228406.1370.50294.5040.880.25
...............................AGCGATGTATAGAGTTCCTACG.................................................................................228386.0035.75345.754.250.25
...............................AGCGAGGTATAGAGTTACTACG.................................................................................228337.6343.88263.1330.130.50
.......................................................................TAGGAACTTCATACCGTGCT...........................................208293.8827.6398.38167.380.50
...............................AGCGAGGCATAGAGTTCCTACG.................................................................................228284.0052.13141.1389.131.63
...............................AGCGAGGTATAGAGTTCCTACGT................................................................................238260.2594.38104.6361.130.13
...............................AGCGAGGGATAGAGTTCCTACG.................................................................................228239.8839.7518.88179.881.38
...............................AGCGAGGTATAGAGTTCCTAGG.................................................................................228237.50134.0095.757.750.00
...............................AGGGAGGTATAGAGTTCCTACG.................................................................................228234.382.75226.634.750.25
.......................................................................TATGAACTTCATACCGTGCTCT.........................................228233.756.38213.1313.630.63
...............................AGCGAGGTATGGAGTTCCTACG.................................................................................228217.6339.00166.7511.750.13
...............................AGCGAGGTATAGAGTTCCTA...................................................................................208201.8852.8885.5063.380.13
...............................GGCGAGGTATAGAGTTCCTACG.................................................................................228201.0048.38141.5010.500.63
.......................................................................TAGGAACTTCATACCGCGCTCT.........................................228177.883.6312.63160.381.25
...............................AGCGAGGTATAGAGTCCCTACG.................................................................................228176.8862.3898.6315.630.25
...............................AGCGGGGTATAGAGTTCCTACG.................................................................................228176.0028.63115.2531.880.25
...............................AGCGAGGTATAGAGCTCCTACG.................................................................................228169.2525.7589.6352.631.25
.......................................................................TAGGAACTTCATACCGTGCTAT.........................................228164.0038.50107.7517.130.63
...............................AGCGAGGTATAGAGTTCC.....................................................................................188151.501.2579.3870.880.00
...............................AGCGAGGTATAGCGTTCCTACG.................................................................................228149.63101.0021.6326.130.88
...............................AGCGAGGTGTAGAGTTCCTACG.................................................................................228140.2528.38100.7510.500.63
...............................AGCGAGGTATACAGTTCCTACG.................................................................................228133.3884.8828.3820.000.13
...............................AGCGCGGTATAGAGTTCCTACG.................................................................................228131.2515.2583.7532.000.25
...............................AGCGAGGTATAGGGTTCCTACG.................................................................................228131.0044.0075.0011.630.38
.......................................................................TAGGAACTTCATACCGTTCTCT.........................................228123.1319.3880.8820.632.25
...............................AGCGAGGTATAAAGTTCCTACG.................................................................................228115.2580.7527.256.630.63
...............................AGCGAGGTATAGATTTCCTACG.................................................................................228114.0027.6381.004.381.00
...............................AGCGAGGTATAGAGTTCCCACG.................................................................................228108.3817.2572.8817.630.63
.......................................................................TAGGAGCTTCATACCGTGCTCT.........................................228107.002.2548.5055.880.38
...............................AGCAAGGTATAGAGTTCCTACG.................................................................................228106.8831.8870.384.380.25
...............................AGCGAGGTATAGAGTTCCTACA.................................................................................228106.7525.3869.8810.880.63
...............................AGCGAGGTACAGAGTTCCTACG.................................................................................228105.6319.1375.1311.130.25
...............................AACGAGGTATAGAGTTCCTACG.................................................................................228105.5069.8827.757.880.00
...............................ACCGAGGTATAGAGTTCCTACG.................................................................................228105.0053.1346.505.130.25
...............................ATCGAGGTATATAGTTCCTACG.................................................................................228104.0017.1386.750.000.13
.......................................................................TAGGAACTTCATACCGTGATCT.........................................228101.0013.8863.8823.130.13
...............................AGCGAGGAATAGAGTTCCTACG.................................................................................22899.2526.887.7564.630.00
................................GCTAGGTATAGAGTTCCTACG.................................................................................21896.3815.7580.630.000.00
...............................AGCGAGGTATAGAGTACCTACG.................................................................................22896.3885.636.504.130.13
.......................................................................TAGGAACTTCATACCGTGCTCTTT.......................................24895.3817.7529.8847.630.13
.......................................................................TAGGGACTTCATACCGTGCTCT.........................................22894.003.5013.1376.750.63
...............................AGCGAGGTATAGACTTCCTACG.................................................................................22888.7539.0038.2510.880.63
...............................AGCGAGGTATAGAGTTCCTGCG.................................................................................22888.7512.8864.6310.750.50
...............................AGTGAGGTATAGAGTTCCTACG.................................................................................22884.7513.6362.388.750.00
...............................AGCGAGATATAGAGTTCCTACG.................................................................................22884.2531.5048.134.380.25
...............................AGCGAGGTATCGAGTTCCTACG.................................................................................22880.3851.8818.0010.500.00
...............................ATCGAGGTATAGAGTTCCTACT.................................................................................22878.0013.6364.000.250.13
.......................................................................TAGGAAATTCATACCGTGCTCT.........................................22875.382.003.6369.500.25
...............................AGCGAGGTATAGTGTTCCTACG.................................................................................22872.5047.756.5018.000.25
...............................AGCGAGGTATAGAGTTCCTACC.................................................................................22872.5013.8835.7521.381.50
................................GCGAGGTATAGAGTTCCTACT.................................................................................21872.0047.5022.631.500.38
...............................AGCGAGTTATAGAGTTCCTACG.................................................................................22871.3816.3851.383.130.50
.......................................................................TAGGAACTTCATACAGTGCTCT.........................................22870.504.0022.7543.750.00
.......................................................................TAGCAACTTCATACCGTGCTCT.........................................22869.003.754.8860.130.25
.......................................................................TAGGAACTTCATACCGAGCTCT.........................................22869.001.132.3865.380.13
................................GCGAGGTATAGAGTTCCTACA.................................................................................21868.5051.5016.500.500.00
...............................AGCGAGGxxTAGAGTTCCTACG.................................................................................20867.2511.3855.750.130.00
.......................................................................TAGGAACTTCAGACCGTGCTCT.........................................22866.2514.130.2551.500.38
...............................AGCGAGGTATAGAATTCCTACG.................................................................................22864.8834.1325.884.750.13
.......................................................................TAGTAACTTCATACCGTGCTCT.........................................22863.636.6341.0015.630.38
...............................AGCGAGGTATAGAGTTCCTCCG.................................................................................22863.2510.3818.5032.252.13
.......................................................................TAGGAACGTCATACCGTGCTCT.........................................22862.500.250.2562.000.00
...............................AGCGAGGTATAGAGTTCCTACGTT...............................................................................24861.2518.8830.0012.380.00
...............................AGCGTGGTATAGAGTTCCTACG.................................................................................22861.008.1338.0014.630.25
................................GCGAGGTATAGAGTTCCTAC..................................................................................20859.5029.3826.883.250.00
...............................AGCGAGGTATAGAGTTTCTACG.................................................................................22857.8810.0042.255.250.38
...............................AGCGAGGTATAGAGTTCTTACG.................................................................................22857.638.2536.7512.630.00
...............................AGCGAGGTATAGAGTTCCTACGC................................................................................23856.7520.8820.5015.380.00
.......................................................................TAGGAACTTCATACCTTGCTCT.........................................22856.5010.0017.0029.000.50
.......................................................................TAGGAACTTCATACCGGGCTCT.........................................22854.630.752.2551.250.38
................................GCGAGGTATATAGTTCCTACG.................................................................................21854.3828.8824.750.750.00
...............................AGCGAGGTATAGAGTGCCTACG.................................................................................22854.1339.882.6311.250.38
.......................................................................TATGAACTTCATACCGTGCTC..........................................21852.880.6350.002.250.00
.......................................................................TAGGCACTTCATACCGTGCTCT.........................................22851.752.506.3842.380.50
.......................................................................TAGGAACTTAATACCGTGCTCTT........................................23851.131.3828.5021.130.13
...............................AGCGAGCTATAGAGTTCCTACG.................................................................................22851.0019.1325.256.000.63
.................................CGAGGTATAGAGTTCCTACG.................................................................................20850.7524.6323.502.500.13
.......................................................................TAGGAACTTCACACCGTGCTCT.........................................22849.759.507.7532.380.13
...............................AGCGAGGTATAGAGGTCCTACG.................................................................................22848.754.006.6337.001.13
...............................AGCCAGGTATAGAGTTCCTACG.................................................................................22848.3823.5018.505.750.63
.......................................................................TAGGAACTTCATACCGTGCTCTA........................................23847.503.6323.0020.630.25
...............................AGCGAGGTATTGAGTTCCTACG.................................................................................22847.2520.1323.253.750.13
.......................................................................TAGGTACTTCATACCGTGCTCT.........................................22846.250.634.1341.500.00
................................GAGAGGTATAGAGTTCCTACG.................................................................................21846.0027.2515.882.880.00
...............................AGCGAGGTCTAGAGTTCCTACG.................................................................................22844.8819.8819.005.880.13
4 scaffold_13337:15274238-15274391 + 62.16
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTT--CATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACA----------------------------------ACCAAGTGAATGCAAAAATCC
CCAAGATATTTCTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTAACATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCTAAAATCAACGAAAACATAAAGCGGAGTTGGTTTCCCCTTCAACCA---------AAAAATC-
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...............................AGCGAGGTATAGAGTTCCTACG...............................................................................................................228125309.5029741.1388057.637278.13232.63
......................................................................TAGGAACTTCATACCGTGCTCT........................................................................22824715.752889.509296.0012365.00165.25
................................GCGAGGTATAGAGTTCCTACG...............................................................................................................2188633.505020.633196.88412.253.75
......................................................................TAGGAACTTCATACCGTGCTC.........................................................................2184213.88147.132386.251678.132.38
......................................................................TAGGAACTTAATACCGTGCTCT........................................................................2281923.6346.88793.631080.382.75
...............................ATCGAGGTATAGAGTTCCTACG...............................................................................................................2281572.88303.751264.503.750.88
...............................AGCGAGGTATAGAGTTCCT..................................................................................................................1981281.00105.501089.3886.000.13
...............................AGCGAGGTATATAGTTCCTACG...............................................................................................................228839.50209.13615.5013.751.13
...............................AGCGAGGTATAGAGTTCCTACT...............................................................................................................228678.50140.25488.7543.256.25
...............................AGCGAGGTATAGAGTTCCTAC................................................................................................................218668.25155.88377.50134.630.25
...............................AGCGAGGTATAGAGTTCCTAAG...............................................................................................................228625.38209.00401.3814.380.63
......................................................................TAGGAACTTCATACCGTGCTCTT.......................................................................238619.1346.38322.88249.500.38
......................................................................TAGGAACTTAATACCGTGCTC.........................................................................218594.887.88338.13248.880.00
...............................AGCTAGGTATAGAGTTCCTACG...............................................................................................................228592.6375.38513.252.501.50
...............................AGCGAGGTATAGAGTTCCTATG...............................................................................................................228532.88218.50293.7520.500.13
...............................AGCGAGGTATAGAGTTCATACG...............................................................................................................228406.2553.88331.7520.630.00
...............................AGAGAGGTATAGAGTTCCTACG...............................................................................................................228406.1370.50294.5040.880.25
...............................AGCGATGTATAGAGTTCCTACG...............................................................................................................228386.0035.75345.754.250.25
...............................AGCGAGGTATAGAGTTACTACG...............................................................................................................228337.6343.88263.1330.130.50
......................................................................TAGGAACTTCATACCGTGCT..........................................................................208293.8827.6398.38167.380.50
...............................AGCGAGGCATAGAGTTCCTACG...............................................................................................................228284.0052.13141.1389.131.63
...............................AGCGAGGTATAGAGTTCCTACGT..............................................................................................................238260.2594.38104.6361.130.13
...............................AGCGAGGGATAGAGTTCCTACG...............................................................................................................228239.8839.7518.88179.881.38
...............................AGCGAGGTATAGAGTTCCTAGG...............................................................................................................228237.50134.0095.757.750.00
...............................AGGGAGGTATAGAGTTCCTACG...............................................................................................................228234.382.75226.634.750.25
......................................................................TATGAACTTCATACCGTGCTCT........................................................................228233.756.38213.1313.630.63
...............................AGCGAGGTATGGAGTTCCTACG...............................................................................................................228217.6339.00166.7511.750.13
...............................AGCGAGGTATAGAGTTCCTA.................................................................................................................208201.8852.8885.5063.380.13
...............................GGCGAGGTATAGAGTTCCTACG...............................................................................................................228201.0048.38141.5010.500.63
......................................................................TAGGAACTTCATACCGCGCTCT........................................................................228177.883.6312.63160.381.25
...............................AGCGAGGTATAGAGTCCCTACG...............................................................................................................228176.8862.3898.6315.630.25
...............................AGCGGGGTATAGAGTTCCTACG...............................................................................................................228176.0028.63115.2531.880.25
...............................AGCGAGGTATAGAGCTCCTACG...............................................................................................................228169.2525.7589.6352.631.25
......................................................................TAGGAACTTCATACCGTGCTAT........................................................................228164.0038.50107.7517.130.63
...............................AGCGAGGTATAGAGTTCC...................................................................................................................188151.501.2579.3870.880.00
...............................AGCGAGGTATAGCGTTCCTACG...............................................................................................................228149.63101.0021.6326.130.88
...............................AGCGAGGTGTAGAGTTCCTACG...............................................................................................................228140.2528.38100.7510.500.63
...............................AGCGAGGTATACAGTTCCTACG...............................................................................................................228133.3884.8828.3820.000.13
...............................AGCGCGGTATAGAGTTCCTACG...............................................................................................................228131.2515.2583.7532.000.25
...............................AGCGAGGTATAGGGTTCCTACG...............................................................................................................228131.0044.0075.0011.630.38
......................................................................TAGGAACTTCATACCGTTCTCT........................................................................228123.1319.3880.8820.632.25
...............................AGCGAGGTATAAAGTTCCTACG...............................................................................................................228115.2580.7527.256.630.63
...............................AGCGAGGTATAGATTTCCTACG...............................................................................................................228114.0027.6381.004.381.00
...............................AGCGAGGTATAGAGTTCCCACG...............................................................................................................228108.3817.2572.8817.630.63
......................................................................TAGGAGCTTCATACCGTGCTCT........................................................................228107.002.2548.5055.880.38
...............................AGCAAGGTATAGAGTTCCTACG...............................................................................................................228106.8831.8870.384.380.25
...............................AGCGAGGTATAGAGTTCCTACA...............................................................................................................228106.7525.3869.8810.880.63
...............................AGCGAGGTACAGAGTTCCTACG...............................................................................................................228105.6319.1375.1311.130.25
...............................AACGAGGTATAGAGTTCCTACG...............................................................................................................228105.5069.8827.757.880.00
...............................ACCGAGGTATAGAGTTCCTACG...............................................................................................................228105.0053.1346.505.130.25
...............................ATCGAGGTATATAGTTCCTACG...............................................................................................................228104.0017.1386.750.000.13
......................................................................TAGGAACTTCATACCGTGATCT........................................................................228101.0013.8863.8823.130.13
...............................AGCGAGGAATAGAGTTCCTACG...............................................................................................................22899.2526.887.7564.630.00
...............................AGCGAGGTATAGAGTACCTACG...............................................................................................................22896.3885.636.504.130.13
................................GCTAGGTATAGAGTTCCTACG...............................................................................................................21896.3815.7580.630.000.00
......................................................................TAGGAACTTCATACCGTGCTCTTT......................................................................24895.3817.7529.8847.630.13
......................................................................TAGGGACTTCATACCGTGCTCT........................................................................22894.003.5013.1376.750.63
...............................AGCGAGGTATAGAGTTCCTGCG...............................................................................................................22888.7512.8864.6310.750.50
...............................AGCGAGGTATAGACTTCCTACG...............................................................................................................22888.7539.0038.2510.880.63
...............................AGTGAGGTATAGAGTTCCTACG...............................................................................................................22884.7513.6362.388.750.00
...............................AGCGAGATATAGAGTTCCTACG...............................................................................................................22884.2531.5048.134.380.25
...............................AGCGAGGTATCGAGTTCCTACG...............................................................................................................22880.3851.8818.0010.500.00
...............................ATCGAGGTATAGAGTTCCTACT...............................................................................................................22878.0013.6364.000.250.13
......................................................................TAGGAAATTCATACCGTGCTCT........................................................................22875.382.003.6369.500.25
...............................AGCGAGGTATAGTGTTCCTACG...............................................................................................................22872.5047.756.5018.000.25
...............................AGCGAGGTATAGAGTTCCTACC...............................................................................................................22872.5013.8835.7521.381.50
................................GCGAGGTATAGAGTTCCTACT...............................................................................................................21872.0047.5022.631.500.38
...............................AGCGAGTTATAGAGTTCCTACG...............................................................................................................22871.3816.3851.383.130.50
......................................................................TAGGAACTTCATACAGTGCTCT........................................................................22870.504.0022.7543.750.00
......................................................................TAGCAACTTCATACCGTGCTCT........................................................................22869.003.754.8860.130.25
......................................................................TAGGAACTTCATACCGAGCTCT........................................................................22869.001.132.3865.380.13
................................GCGAGGTATAGAGTTCCTACA...............................................................................................................21868.5051.5016.500.500.00
...............................AGCGAGGxxTAGAGTTCCTACG...............................................................................................................20867.2511.3855.750.130.00
......................................................................TAGGAACTTCAGACCGTGCTCT........................................................................22866.2514.130.2551.500.38
...............................AGCGAGGTATAGAATTCCTACG...............................................................................................................22864.8834.1325.884.750.13
......................................................................TAGTAACTTCATACCGTGCTCT........................................................................22863.636.6341.0015.630.38
...............................AGCGAGGTATAGAGTTCCTCCG...............................................................................................................22863.2510.3818.5032.252.13
......................................................................TAGGAACGTCATACCGTGCTCT........................................................................22862.500.250.2562.000.00
...............................AGCGAGGTATAGAGTTCCTACGTT.............................................................................................................24861.2518.8830.0012.380.00
...............................AGCGTGGTATAGAGTTCCTACG...............................................................................................................22861.008.1338.0014.630.25
................................GCGAGGTATAGAGTTCCTAC................................................................................................................20859.5029.3826.883.250.00
...............................AGCGAGGTATAGAGTTTCTACG...............................................................................................................22857.8810.0042.255.250.38
...............................AGCGAGGTATAGAGTTCTTACG...............................................................................................................22857.638.2536.7512.630.00
...............................AGCGAGGTATAGAGTTCCTACGC..............................................................................................................23856.7520.8820.5015.380.00
......................................................................TAGGAACTTCATACCTTGCTCT........................................................................22856.5010.0017.0029.000.50
......................................................................TAGGAACTTCATACCGGGCTCT........................................................................22854.630.752.2551.250.38
................................GCGAGGTATATAGTTCCTACG...............................................................................................................21854.3828.8824.750.750.00
...............................AGCGAGGTATAGAGTGCCTACG...............................................................................................................22854.1339.882.6311.250.38
......................................................................TATGAACTTCATACCGTGCTC.........................................................................21852.880.6350.002.250.00
......................................................................TAGGCACTTCATACCGTGCTCT........................................................................22851.752.506.3842.380.50
......................................................................TAGGAACTTAATACCGTGCTCTT.......................................................................23851.131.3828.5021.130.13
...............................AGCGAGCTATAGAGTTCCTACG...............................................................................................................22851.0019.1325.256.000.63
.................................CGAGGTATAGAGTTCCTACG...............................................................................................................20850.7524.6323.502.500.13
......................................................................TAGGAACTTCACACCGTGCTCT........................................................................22849.759.507.7532.380.13
...............................AGCGAGGTATAGAGGTCCTACG...............................................................................................................22848.754.006.6337.001.13
...............................AGCCAGGTATAGAGTTCCTACG...............................................................................................................22848.3823.5018.505.750.63
......................................................................TAGGAACTTCATACCGTGCTCTA.......................................................................23847.503.6323.0020.630.25
...............................AGCGAGGTATTGAGTTCCTACG...............................................................................................................22847.2520.1323.253.750.13
......................................................................TAGGTACTTCATACCGTGCTCT........................................................................22846.250.634.1341.500.00
................................GAGAGGTATAGAGTTCCTACG...............................................................................................................21846.0027.2515.882.880.00
...............................AGCGAGGTCTAGAGTTCCTACG...............................................................................................................22844.8819.8819.005.880.13
6 scaffold_13117:3657115-3657241 - 45.39
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAAC-----------TTCATACCGTGCTCTTGGAAGACCAAAAAACAAC--CAAGTGAATGCAAAAATCC
TTTGCATAACTTT---------------GCTGGCGTGGCATAAACATCAAAAACAAATTGCAAGTAACAAAAGAAACGGTCATAAAAAGGCGCCATCCTCGTAAAAATACAAAATACTACTACGAAAAAAAACAGAAATTA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...................................................AACAAAxTGCAACTAACAAAA.....................................................................2030.330.000.000.000.33
.....................................................................AAAGAAACAGGCATAAAAA.....................................................1920.500.000.000.000.50
.............................................................................................................AAACATACTACTACGAAAAA............2020.500.000.000.000.50
.............................................................................................................CAAAATACTCCTAAGAAAAA............2020.500.000.000.000.50
..........................................................................AACGGTCATAAAAAGGCGCCATCCTCGT.......................................2820.500.000.500.000.00


droBip1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 scf7180000395933:129274-129383 + 71.18
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTT--CATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTAACATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCTAAAATCAA--------------------
SizeHit CountTotal Norm
2 scf7180000395933:88117-88228 + 65.87
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA---TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGAC---CAAAAAACAACCAAGTGAATGCAAAAATCC
T----------------------TTACCATCAGCGAGGTATAGAGTTCCTACGTGCCACTTTAACTAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCATCGAGAAAGTCTTTCCACAACTTT
SizeHit CountTotal Norm


dp4 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 chrXR_group6:8756376-8756505 + 69.23
CCA----------AGATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CGAACGGAGGAGAAGATGTGTGTATTTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAGACAACGA-----------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
.......................................................................................TAGGAACTTCATACCGTGCTCT......................................22815887.631554.253420.2510416.25496.88
................................................AGCGAGGTATAGAGTTCCTACG.............................................................................22811662.008588.752201.00870.881.38
.......................................................................................TAGGAACTTCATACCGTGCTC.......................................2184204.75490.7544.133476.63193.25
.......................................................................................TAGGAACTTAATACCGTGCTCT......................................2281387.8811.3843.001307.3826.13
.......................................................................................TAGGAACTTAATACCGTGCTC.......................................218412.635.001.25401.385.00
.......................................................................................TAGGAACTTCATACCGTGCT........................................208361.6332.754.50289.2535.13
.................................................GCGAGGTATAGAGTTCCTACG.............................................................................218327.63297.8819.2510.500.00
.......................................................................................TAGGAACTTCATACCGTGCTCTT.....................................238293.8842.2517.13227.636.88
................................................AGCGAGGTATAGAGTTCCTAC..............................................................................218249.13211.503.8833.630.13
................................................AGCGAGGTATAGAGTTCCTACGT............................................................................238101.0082.751.0017.250.00
.......................................................................................TAGGAACTTCATACCGCGCTCT......................................22898.751.8814.1382.380.38
................................................AGCGAGGTATAGAGTTCCTA...............................................................................20891.5069.880.2521.380.00
................................................AGCGAGGTATAGAGTTCCT................................................................................19876.1357.750.5017.630.25
.......................................................................................TAGGAGCTTCATACCGTGCTCT......................................22870.002.256.0061.750.00
.......................................................................................TAGGAACTTCATACCGTGCTCC......................................22861.255.254.6324.8826.50
.......................................................................................TAAGAACTTCATACCGTGCTCT......................................22848.000.387.1340.500.00
.......................................................................................TAGGAACTTAATACCGTGCT........................................20846.750.630.0044.751.38
.......................................................................................TAGGAACTTCATACCGAGCTCT......................................22845.630.257.7537.380.25
......................................................................................CTAGGAACTTCATACCGTGCTCT......................................23842.133.2512.3826.380.13
.......................................................................................TAGGAACTTCATACCGTGCTT.......................................21840.003.500.1333.752.63
.......................................................................................TAGGAAATTCATACCGTGCTCT......................................22837.630.5017.8819.250.00
................................................AGCGAGGTATAGAGTTCCTACT.............................................................................22832.5026.384.002.130.00
.......................................................................................TAGGAACTTAATACCGTGCTCTT.....................................23830.000.630.1329.130.13
.......................................................................................TAGGAACTTCATACCGCGCTC.......................................21828.750.250.5028.000.00
.......................................................................................TACGAACTTCATACCGTGCTCT......................................22828.380.751.1326.000.50
.......................................................................................TAGGGACTTCATACCGTGCTCT......................................22828.250.8811.3815.880.13
.......................................................................................TAGCAACTTCATACCGTGCTCT......................................22827.880.884.1322.630.25
.......................................................................................TAGGAACTTCATACAGTGCTCT......................................22827.630.389.7517.500.00
................................................AGCGAGGGATAGAGTTCCTACG.............................................................................22826.631.3819.635.630.00
.......................................................................................TAGGAACTTCATACCGGGCTCT......................................22824.750.638.8814.750.50
.......................................................................................TAGGAACTTCATACCGTGCTCTTT....................................24823.757.131.2514.381.00
.......................................................................................TAGGTACTTCATACCGTGCTCT......................................22823.750.1314.009.630.00
.......................................................................................TAGGAACTTCGTACCGTGCTCT......................................22823.130.506.1316.500.00
................................................AGCGAGGTATAGAGTTCCTACA.............................................................................22822.2517.502.002.750.00
.......................................................................................TAGGAACTTCAGACCGTGCTCT......................................22822.250.255.2516.630.13
.......................................................................................TAGGAACGTCATACCGTGCTCT......................................22821.380.005.1316.250.00
.......................................................................................TAGGAACTTCATACCGTGCCCT......................................22820.752.384.7513.380.25
................................................AGCGAGGCATAGAGTTCCTACG.............................................................................22820.259.007.633.630.00
.......................................................................................TAGGAACTTCACACCGTGCTCT......................................22820.250.753.0016.000.50
.......................................................................................TAGGAACTTCATACCATGCTCT......................................22820.130.754.8814.130.38
................................................AGCGAGGTATAGAGCTCCTACG.............................................................................22819.386.389.633.380.00
.......................................................................................TAGGAACTTCATAACGTGCTCT......................................22819.130.137.2511.630.13
.......................................................................................TAGGAACTTCATACTGTGCTCT......................................22818.751.003.7513.880.13
.......................................................................................TAGGAACTTCATACCGTGCTAT......................................22818.380.637.5010.130.13
.......................................................................................TAGGCACTTCATACCGTGCTCT......................................22818.131.256.7510.130.00
................................................AGAGAGGTATAGAGTTCCTACG.............................................................................22817.881.8811.884.130.00
.......................................................................................TAGGAACTTCATACCGTGATCT......................................22817.880.886.8810.130.00
.......................................................................................TATGAACTTCATACCGTGCTCT......................................22817.631.001.6314.250.75
................................................AGCGAGGTATAGAGTTCCTAAG.............................................................................22817.636.3810.001.250.00
................................................AGCGAGGTATAGAGTTCCTCCG.............................................................................22817.639.386.132.130.00
.......................................................................................TAGGAACTTCATACCGTCCTCT......................................22817.380.633.2513.500.00
.......................................................................................TAGGAACTTCATACCGTGCTCTA.....................................23817.131.880.5014.000.75
................................................AGCGAGGTATAGAGTTCCTACC.............................................................................22817.1311.753.132.250.00
.......................................................................................TGGGAACTTCATACCGTGCTCT......................................22816.500.883.0012.500.13
................................................AGCGAGGTATAGCGTTCCTACG.............................................................................22816.005.508.751.750.00
.......................................................................................TAGGAACTTCATACCTTGCTCT......................................22815.382.382.759.630.63
.......................................................................................CAGGAACTTCATACCGTGCTCT......................................22815.380.753.8810.630.13
................................................AGCGAGGTATAGAGTTCCTACGTT...........................................................................24815.1314.000.001.130.00
................................................AGCGAGGTATAGAGGTCCTACG.............................................................................22814.630.2513.001.380.00
................................................AGCGAGGTATAGAGTTACTACG.............................................................................22814.631.7510.752.130.00
.......................................................................................TAGGAACTTCATACCGTTCTCT......................................22814.631.134.389.000.13
.......................................................................................TAGGAACTTCCTACCGTGCTCT......................................22814.380.386.887.130.00
................................................AGCGGGGTATAGAGTTCCTACG.............................................................................22814.257.884.631.750.00
.......................................................................................TAGGAACTTCATATCGTGCTCT......................................22813.630.387.505.750.00
.......................................................................................TAGGAACTCCATACCGTGCTCT......................................22813.501.752.888.880.00
.......................................................................................TAGGAACTTCATACCGAGCTC.......................................21813.500.000.1313.250.13
.......................................................................................TAGGAACCTCATACCGTGCTCT......................................22813.501.503.388.630.00
.................................................GCGAGGTATAGAGTTCCTAC..............................................................................20813.5012.750.000.750.00
.......................................................................................TAGGAACTTCATACCGTGCGCT......................................22813.380.133.389.880.00
.......................................................................................TAGGAACTTCATACCCTGCTCT......................................22813.250.632.2510.130.25
.......................................................................................TAAGAACTTCATACCGTGCTC.......................................21813.000.000.0013.000.00
................................................AGCGAGGTGTAGAGTTCCTACG.............................................................................22812.637.634.130.880.00
.......................................................................................TAGGAACTTCATGCCGTGCTCT......................................22812.250.753.006.502.00
................................................AGCGAGGTATAGAGTTCCCACG.............................................................................22811.888.002.881.000.00
................................................AGCGAGGTATAGAGTCCCTACG.............................................................................22811.507.252.501.750.00
.......................................................................................TAGGAATTTCATACCGTGCTCT......................................22811.380.254.386.750.00
.......................................................................................TAGGAACTTAATACCGCGCTCT......................................22811.000.130.3810.500.00
.......................................................................................TAGGAACTTTATACCGTGCTCT......................................22811.000.883.886.130.13
..................................................CGAGGTATAGAGTTCCTACG.............................................................................20810.8810.500.130.250.00
................................................AGCGCGGTATAGAGTTCCTACG.............................................................................22810.754.384.501.880.00
.......................................................................................TAGGAACTTCATACCGTGCTCG......................................22810.630.752.003.754.13
................................................AGCGAGGTATAGGGTTCCTACG.............................................................................22810.505.504.250.750.00
................................................AGCGAGGTATAGAGTTCCTATG.............................................................................22810.504.754.631.130.00
.......................................................................................TAGAAACTTCATACCGTGCTCT......................................22810.250.753.635.630.25
.......................................................................................GAGGAACTTCATACCGTGCTCT......................................22810.000.382.257.250.13
................................................AGCGAGGTATAGAGATCCTACG.............................................................................2289.880.887.501.500.00
.......................................................................................TAGGAACTTCATACCGTACTCT......................................2289.880.252.256.750.63
.......................................................................................TAGGAACTTCATCCCGTGCTCT......................................2289.630.633.505.380.13
................................................AGCGAGGTATAGAGTTCCGACG.............................................................................2289.630.637.381.630.00
.......................................................................................TAGGAACTTCATACCGTGCTCA......................................2289.502.000.387.000.13
................................................AGCGAGGTATAGAGTTCATACG.............................................................................2289.502.506.250.750.00
................................................GGCGAGGTATAGAGTTCCTACG.............................................................................2289.386.382.500.500.00
................................................AGCGAGGTATGGAGTTCCTACG.............................................................................2289.136.132.250.750.00
.......................................................................................TACGAACTTCATACCGTGCTC.......................................2189.000.500.008.380.13
......................................................................................CTAGGAACTTCATACCGTGCTC.......................................2289.000.630.138.000.25
.......................................................................................AAGGAACTTCATACCGTGCTCT......................................2289.000.252.136.380.25
................................................AGCGAGGTATACAGTTCCTACG.............................................................................2288.754.882.751.130.00
.......................................................................................TAGGAACTTCATACCGTGTTCT......................................2288.000.382.505.130.00
................................................AGCGAGGTATAGAGTTCCTGCG.............................................................................2288.003.134.130.750.00
.......................................................................................TAGGAACTTCATACCGTGCTTT......................................2288.000.752.504.750.00
.......................................................................................TAGGAACTTAATACCGAGCTCT......................................2287.880.000.257.630.00
2 chrXR_group6:8706022-8706156 + 63.6
CCAAGA-TATTTTTTACCTGG--TTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTAT--AAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAA-GTGAATGCAAAAATCC-
CGAAAAGTATCTAAAGCGAAGCCTCTTTACCATCAGCGAGGTATAGAGTTCCTACGTGCCGTATCCAAAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCCATCAACGAACGTGAAACAGTGTATCTT
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
.........................................................................TAGGAACTTCATACCGTGCTCT........................................22815887.631554.253420.2510416.25496.88
..................................AGCGAGGTATAGAGTTCCTACG...............................................................................22811662.008588.752201.00870.881.38
.........................................................................TAGGAACTTCATACCGTGCTC.........................................2184204.75490.7544.133476.63193.25
.........................................................................TAGGAACTTAATACCGTGCTCT........................................2281387.8811.3843.001307.3826.13
.........................................................................TAGGAACTTAATACCGTGCTC.........................................218412.635.001.25401.385.00
.........................................................................TAGGAACTTCATACCGTGCT..........................................208361.6332.754.50289.2535.13
...................................GCGAGGTATAGAGTTCCTACG...............................................................................218327.63297.8819.2510.500.00
.........................................................................TAGGAACTTCATACCGTGCTCTT.......................................238293.8842.2517.13227.636.88
..................................AGCGAGGTATAGAGTTCCTAC................................................................................218249.13211.503.8833.630.13
..................................AGCGAGGTATAGAGTTCCTACGT..............................................................................238101.0082.751.0017.250.00
.........................................................................TAGGAACTTCATACCGCGCTCT........................................22898.751.8814.1382.380.38
..................................AGCGAGGTATAGAGTTCCTA.................................................................................20891.5069.880.2521.380.00
..................................AGCGAGGTATAGAGTTCCT..................................................................................19876.1357.750.5017.630.25
.........................................................................TAGGAGCTTCATACCGTGCTCT........................................22870.002.256.0061.750.00
.........................................................................TAGGAACTTCATACCGTGCTCC........................................22861.255.254.6324.8826.50
.........................................................................TAAGAACTTCATACCGTGCTCT........................................22848.000.387.1340.500.00
.........................................................................TAGGAACTTAATACCGTGCT..........................................20846.750.630.0044.751.38
.........................................................................TAGGAACTTCATACCGAGCTCT........................................22845.630.257.7537.380.25
........................................................................CTAGGAACTTCATACCGTGCTCT........................................23842.133.2512.3826.380.13
.........................................................................TAGGAACTTCATACCGTGCTT.........................................21840.003.500.1333.752.63
.........................................................................TAGGAAATTCATACCGTGCTCT........................................22837.630.5017.8819.250.00
..................................AGCGAGGTATAGAGTTCCTACT...............................................................................22832.5026.384.002.130.00
.........................................................................TAGGAACTTAATACCGTGCTCTT.......................................23830.000.630.1329.130.13
.........................................................................TAGGAACTTCATACCGCGCTC.........................................21828.750.250.5028.000.00
.........................................................................TACGAACTTCATACCGTGCTCT........................................22828.380.751.1326.000.50
.........................................................................TAGGGACTTCATACCGTGCTCT........................................22828.250.8811.3815.880.13
.........................................................................TAGCAACTTCATACCGTGCTCT........................................22827.880.884.1322.630.25
.........................................................................TAGGAACTTCATACAGTGCTCT........................................22827.630.389.7517.500.00
..................................AGCGAGGGATAGAGTTCCTACG...............................................................................22826.631.3819.635.630.00
.........................................................................TAGGAACTTCATACCGGGCTCT........................................22824.750.638.8814.750.50
.........................................................................TAGGAACTTCATACCGTGCTCTTT......................................24823.757.131.2514.381.00
.........................................................................TAGGTACTTCATACCGTGCTCT........................................22823.750.1314.009.630.00
.........................................................................TAGGAACTTCGTACCGTGCTCT........................................22823.130.506.1316.500.00
.........................................................................TAGGAACTTCAGACCGTGCTCT........................................22822.250.255.2516.630.13
..................................AGCGAGGTATAGAGTTCCTACA...............................................................................22822.2517.502.002.750.00
.........................................................................TAGGAACGTCATACCGTGCTCT........................................22821.380.005.1316.250.00
.........................................................................TAGGAACTTCATACCGTGCCCT........................................22820.752.384.7513.380.25
..................................AGCGAGGCATAGAGTTCCTACG...............................................................................22820.259.007.633.630.00
.........................................................................TAGGAACTTCACACCGTGCTCT........................................22820.250.753.0016.000.50
.........................................................................TAGGAACTTCATACCATGCTCT........................................22820.130.754.8814.130.38
..................................AGCGAGGTATAGAGCTCCTACG...............................................................................22819.386.389.633.380.00
.........................................................................TAGGAACTTCATAACGTGCTCT........................................22819.130.137.2511.630.13
.........................................................................TAGGAACTTCATACTGTGCTCT........................................22818.751.003.7513.880.13
.........................................................................TAGGAACTTCATACCGTGCTAT........................................22818.380.637.5010.130.13
.........................................................................TAGGCACTTCATACCGTGCTCT........................................22818.131.256.7510.130.00
..................................AGAGAGGTATAGAGTTCCTACG...............................................................................22817.881.8811.884.130.00
.........................................................................TAGGAACTTCATACCGTGATCT........................................22817.880.886.8810.130.00
..................................AGCGAGGTATAGAGTTCCTCCG...............................................................................22817.639.386.132.130.00
.........................................................................TATGAACTTCATACCGTGCTCT........................................22817.631.001.6314.250.75
..................................AGCGAGGTATAGAGTTCCTAAG...............................................................................22817.636.3810.001.250.00
.........................................................................TAGGAACTTCATACCGTCCTCT........................................22817.380.633.2513.500.00
.........................................................................TAGGAACTTCATACCGTGCTCTA.......................................23817.131.880.5014.000.75
..................................AGCGAGGTATAGAGTTCCTACC...............................................................................22817.1311.753.132.250.00
.........................................................................TGGGAACTTCATACCGTGCTCT........................................22816.500.883.0012.500.13
..................................AGCGAGGTATAGCGTTCCTACG...............................................................................22816.005.508.751.750.00
.........................................................................CAGGAACTTCATACCGTGCTCT........................................22815.380.753.8810.630.13
.........................................................................TAGGAACTTCATACCTTGCTCT........................................22815.382.382.759.630.63
..................................AGCGAGGTATAGAGTTCCTACGTT.............................................................................24815.1314.000.001.130.00
..................................AGCGAGGTATAGAGGTCCTACG...............................................................................22814.630.2513.001.380.00
..................................AGCGAGGTATAGAGTTACTACG...............................................................................22814.631.7510.752.130.00
.........................................................................TAGGAACTTCATACCGTTCTCT........................................22814.631.134.389.000.13
.........................................................................TAGGAACTTCCTACCGTGCTCT........................................22814.380.386.887.130.00
..................................AGCGGGGTATAGAGTTCCTACG...............................................................................22814.257.884.631.750.00
.........................................................................TAGGAACTTCATATCGTGCTCT........................................22813.630.387.505.750.00
...................................GCGAGGTATAGAGTTCCTAC................................................................................20813.5012.750.000.750.00
.........................................................................TAGGAACTCCATACCGTGCTCT........................................22813.501.752.888.880.00
.........................................................................TAGGAACTTCATACCGAGCTC.........................................21813.500.000.1313.250.13
.........................................................................TAGGAACCTCATACCGTGCTCT........................................22813.501.503.388.630.00
.........................................................................TAGGAACTTCATACCGTGCGCT........................................22813.380.133.389.880.00
.........................................................................TAGGAACTTCATACCCTGCTCT........................................22813.250.632.2510.130.25
.........................................................................TAAGAACTTCATACCGTGCTC.........................................21813.000.000.0013.000.00
..................................AGCGAGGTGTAGAGTTCCTACG...............................................................................22812.637.634.130.880.00
.........................................................................TAGGAACTTCATGCCGTGCTCT........................................22812.250.753.006.502.00
..................................AGCGAGGTATAGAGTTCCCACG...............................................................................22811.888.002.881.000.00
..................................AGCGAGGTATAGAGTCCCTACG...............................................................................22811.507.252.501.750.00
.........................................................................TAGGAATTTCATACCGTGCTCT........................................22811.380.254.386.750.00
.........................................................................TAGGAACTTAATACCGCGCTCT........................................22811.000.130.3810.500.00
.........................................................................TAGGAACTTTATACCGTGCTCT........................................22811.000.883.886.130.13
....................................CGAGGTATAGAGTTCCTACG...............................................................................20810.8810.500.130.250.00
..................................AGCGCGGTATAGAGTTCCTACG...............................................................................22810.754.384.501.880.00
.........................................................................TAGGAACTTCATACCGTGCTCG........................................22810.630.752.003.754.13
..................................AGCGAGGTATAGGGTTCCTACG...............................................................................22810.505.504.250.750.00
..................................AGCGAGGTATAGAGTTCCTATG...............................................................................22810.504.754.631.130.00
.........................................................................TAGAAACTTCATACCGTGCTCT........................................22810.250.753.635.630.25
.........................................................................GAGGAACTTCATACCGTGCTCT........................................22810.000.382.257.250.13
.........................................................................TAGGAACTTCATACCGTACTCT........................................2289.880.252.256.750.63
..................................AGCGAGGTATAGAGATCCTACG...............................................................................2289.880.887.501.500.00
..................................AGCGAGGTATAGAGTTCCGACG...............................................................................2289.630.637.381.630.00
.........................................................................TAGGAACTTCATCCCGTGCTCT........................................2289.630.633.505.380.13
.........................................................................TAGGAACTTCATACCGTGCTCA........................................2289.502.000.387.000.13
..................................AGCGAGGTATAGAGTTCATACG...............................................................................2289.502.506.250.750.00
..................................GGCGAGGTATAGAGTTCCTACG...............................................................................2289.386.382.500.500.00
..................................AGCGAGGTATGGAGTTCCTACG...............................................................................2289.136.132.250.750.00
.........................................................................TACGAACTTCATACCGTGCTC.........................................2189.000.500.008.380.13
.........................................................................AAGGAACTTCATACCGTGCTCT........................................2289.000.252.136.380.25
........................................................................CTAGGAACTTCATACCGTGCTC.........................................2289.000.630.138.000.25
..................................AGCGAGGTATACAGTTCCTACG...............................................................................2288.754.882.751.130.00
.........................................................................TAGGAACTTCATACCGTGCTTT........................................2288.000.752.504.750.00
.........................................................................TAGGAACTTCATACCGTGTTCT........................................2288.000.382.505.130.00
..................................AGCGAGGTATAGAGTTCCTGCG...............................................................................2288.003.134.130.750.00
.........................................................................TAGGAACTTAATACCGAGCTCT........................................2287.880.000.257.630.00
5 Unknown_singleton_2232:903-1036 + 42.0
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCT-----------------TGGAAGACCAAAAAACAACCAAGTGAATGCAAAAAT-----CC
TTGAATTAAATTTTGTTTG-TTTTAATTAACGAAAAAATG------CCTTATATTT---------CAAAGGAAATTTCAAGCCAAAAAATGAATAAATAAAAACCAAAAGTGTATCAAATAAAAGCCGATAAAACGCAGAAATTATTCCC
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
..............................................................................................GAATACAAACCAAAAGTGT.....................................1921.001.000.000.000.00
...............................................................................................AATACAAACCAAAAGTGT.....................................1821.001.000.000.000.00
.............................................................................................TGAATACAAACCAAAAGTGT.....................................2020.500.500.000.000.00


droPer1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 super_27:1191188-1191317 + 69.23
CCA----------AGATA-------TTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CGAACGGAGGAGAAGATGTGTGTATTTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAGACAACGA-----------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
.......................................................................................TAGGAACTTCATACCGTGCTCT......................................22822831.251053.25478.259339.2510779.881180.63
................................................AGCGAGGTATAGAGTTCCTACG.............................................................................22813041.753804.38365.13980.887890.880.50
.......................................................................................TAGGAACTTCATACCGTGCTC.......................................2188908.00164.6326.003017.385583.00117.00
.......................................................................................TAGGAACTTAATACCGTGCTCT......................................2282823.759.136.501227.131454.13126.88
.......................................................................................TAGGAACTTAATACCGTGCTC.......................................2181101.002.500.25348.75745.134.38
.......................................................................................TAGGAACTTCATACCGTGCT........................................208504.2514.751.13183.75296.638.00
.......................................................................................TAGGAACTTCATACCGTGCTCTT.....................................238420.7512.885.63163.88235.502.88
................................................AGCGAGGTATAGAGTTCCTAC..............................................................................218320.5066.630.0023.38230.250.25
.................................................GCGAGGTATAGAGTTCCTACG.............................................................................218247.88168.132.889.3867.500.00
................................................AGCGAGGTATAGAGTTCCT................................................................................198227.6398.750.1311.38117.380.00
................................................AGCGAGGGATAGAGTTCCTACG.............................................................................228223.0010.130.754.63207.500.00
.......................................................................................TAGGAACTTCATACCGCGCTCT......................................228202.750.750.6360.50140.250.63
.......................................................................................TAGGAGCTTCATACCGTGCTCT......................................228194.881.130.6393.3899.750.00
................................................AGCGAGGTATAGAGTTCCTACGT............................................................................238161.0024.880.2514.38121.500.00
.......................................................................................TAGGAACTTCATACCGTGCTCC......................................228154.881.380.3818.5036.2598.38
................................................AGCGAGGTATAGAGTTCCTA...............................................................................208133.8816.880.0013.50103.500.00
.......................................................................................TAGGAACTTCATACCGCGCTC.......................................21898.880.000.1319.1379.630.00
................................................AGCGAGGCATAGAGTTCCTACG.............................................................................22892.636.000.883.3882.380.00
.......................................................................................TAGGAACTTCATACCGAGCTCT......................................22880.751.630.5021.7556.750.13
.......................................................................................TAGGGACTTCATACCGTGCTCT......................................22879.381.130.6310.3866.500.75
.......................................................................................TAGGAACGTCATACCGTGCTCT......................................22876.880.130.006.8869.880.00
.......................................................................................TAGCAACTTCATACCGTGCTCT......................................22874.750.250.2516.3857.880.00
.......................................................................................TAGGAACTTAATACCGTGCT........................................20869.380.000.0027.2541.880.25
.......................................................................................TAGGAAATTCATACCGTGCTCT......................................22862.000.130.8814.1346.630.25
................................................AGCGAGGAATAGAGTTCCTACG.............................................................................22859.634.880.132.1352.500.00
................................................AGCGAGGTATAGAGCTCCTACG.............................................................................22852.882.131.753.3845.630.00
.......................................................................................TAGGAACTTAATACCGTGCTCTT.....................................23852.750.130.0021.5030.750.38
......................................................................................CTAGGAACTTCATACCGTGCTCT......................................23852.501.131.0023.6326.750.00
.......................................................................................TAGGAACTTCATACAGTGCTCT......................................22852.130.380.7513.3836.880.75
................................................AGCGAGGTATAGAGTTCCTACT.............................................................................22850.257.000.631.5041.130.00
.......................................................................................TAGGAACTTCATACCGTGCTT.......................................21847.751.250.0012.8833.500.13
.......................................................................................TAGGAACTTCAGACCGTGCTCT......................................22847.500.130.139.6337.500.13
.......................................................................................TAGGAACTTCATACCGGGCTCT......................................22846.130.381.888.1335.000.75
................................................AGCGGGGTATAGAGTTCCTACG.............................................................................22845.133.380.380.8840.500.00
.......................................................................................TAGGAACTTCATACCGTGCTCG......................................22844.130.250.253.139.8830.63
................................................AGAGAGGTATAGAGTTCCTACG.............................................................................22842.380.881.252.2538.000.00
.......................................................................................TAGGAACTTCATACCGTCCTCT......................................22842.000.630.2512.6328.380.13
.......................................................................................TAAGAACTTCATACCGTGCTCT......................................22841.750.750.3819.2521.130.25
.......................................................................................TAGGAACTTCATACCGAGCTC.......................................21840.630.130.009.2531.250.00
.......................................................................................TAGGAACGTCATACCGTGCTC.......................................21839.250.000.002.7536.500.00
................................................AGCGAGGTATAGAGTTACTACG.............................................................................22838.501.880.381.3834.880.00
.......................................................................................TAGGAACTGCATACCGTGCTCT......................................22837.630.130.253.0034.250.00
................................................AGCGCGGTATAGAGTTCCTACG.............................................................................22837.001.250.001.5034.250.00
.......................................................................................TAGGAACTTCACACCGTGCTCT......................................22836.880.880.7510.0025.000.25
................................................AGCGAGGTATAGAGTTCCTACA.............................................................................22836.754.380.633.8827.880.00
.......................................................................................TAGGGACTTCATACCGTGCTC.......................................21836.000.630.003.2531.880.25
.......................................................................................TAGGTACTTCATACCGTGCTCT......................................22835.880.381.507.8826.130.00
................................................AGCGAGGTATAGAGTTCCTACC.............................................................................22835.382.130.003.1330.130.00
.......................................................................................TAGCAACTTCATACCGTGCTC.......................................21835.380.000.004.0031.380.00
.......................................................................................TGGGAACTTCATACCGTGCTCT......................................22834.380.250.3810.1322.631.00
................................................AGCGAGGTATAGAGGTCCTACG.............................................................................22834.250.751.251.5030.750.00
.......................................................................................TAGGCACTTCATACCGTGCTCT......................................22834.250.380.255.1328.250.25
.......................................................................................TAGGAACTTCATAACGTGCTCT......................................22833.380.130.758.6323.880.00
.......................................................................................TAGGAACTTCGTACCGTGCTCT......................................22833.251.251.0011.8819.000.13
................................................AGCGAGGTATAGAGTTCCGACG.............................................................................22833.250.500.880.6331.250.00
.......................................................................................TAGGAACTTCATACCATGCTCT......................................22832.750.630.8812.8817.500.88
.......................................................................................TAGGAGCTTCATACCGTGCTC.......................................21832.630.130.0015.2517.250.00
.......................................................................................TAGGAAATTCATACCGTGCTC.......................................21832.130.000.135.5026.500.00
.......................................................................................TAGGACCTTCATACCGTGCTCT......................................22832.000.130.0019.8812.000.00
.......................................................................................TAGGAACTTCATACCTTGCTCT......................................22831.751.630.3810.1316.383.25
.......................................................................................CAGGAACTTCATACCGTGCTCT......................................22831.500.750.387.5019.633.25
.......................................................................................TAGGAACTTCATACCGTGCTCTA.....................................23831.380.380.1312.6318.250.00
.......................................................................................TAGGAACTTCATACCCTGCTCT......................................22830.380.130.636.5022.250.88
................................................AGCGAGGTATAGAGTTCCTATG.............................................................................22829.501.500.751.1326.130.00
.......................................................................................TAGGAACTTCATACCGTGATCT......................................22829.380.750.1314.7513.750.00
.......................................................................................TAGGAACTTCATACTGTGCTCT......................................22829.130.750.7512.6314.500.50
................................................AGCGAGGTATAGAGTTCCTCCG.............................................................................22828.500.250.632.7524.880.00
.......................................................................................TAGGAACTTCATACCGTGCTAT......................................22827.880.251.3816.259.880.13
.......................................................................................TAGGAACTTAATACCGCGCTCT......................................22827.380.000.138.3818.880.00
.......................................................................................TAGGAACTTCATACCGTGCGCT......................................22827.250.130.135.0022.000.00
.......................................................................................TAGGAACTTCATACCGTGCCCT......................................22827.000.380.389.2515.881.13
.......................................................................................AAGGAACTTCATACCGTGCTCT......................................22827.000.500.005.8819.501.13
.......................................................................................TAGGAACTTCATACCGTTCTCT......................................22826.130.750.009.1315.251.00
.......................................................................................TAGGAATTTCATACCGTGCTCT......................................22825.630.630.255.8818.750.13
................................................AGCGAGGTATAGAGTTCATACG.............................................................................22825.501.131.002.1321.250.00
.......................................................................................TAGGAACTTCATACCGTCCTC.......................................21823.500.130.004.5018.880.00
................................................AGCGAGGTATAGAGATCCTACG.............................................................................22823.500.000.750.6322.130.00
.......................................................................................TAGGAACCTCATACCGTGCTCT......................................22822.880.880.256.0015.130.63
.......................................................................................TAGGAACTTCAGACCGTGCTC.......................................21822.250.000.002.6319.630.00
.......................................................................................TAGGAACTTCCTACCGTGCTCT......................................22822.130.001.005.3815.750.00
................................................AGCGAGGTATACAGTTCCTACG.............................................................................22822.000.500.250.8820.380.00
.......................................................................................TAGGAACTTCATACAGTGCTC.......................................21822.000.130.004.5017.380.00
................................................AGCGAGGTATAGCGTTCCTACG.............................................................................22822.000.380.501.0020.130.00
................................................AGCGAGGTATAGTGTTCCTACG.............................................................................22821.880.131.000.3820.380.00
.......................................................................................TAGGAACTTCATACCGGGCTC.......................................21821.630.130.002.3819.130.00
......................................................................................CTAGGAACTTCATACCGTGCTC.......................................22821.380.380.008.2512.750.00
.......................................................................................TAGGAAGTTCATACCGTGCTCT......................................22821.130.000.252.0018.880.00
.......................................................................................TAGGAACTTCATACCGTACTCT......................................22820.630.500.139.389.631.00
................................................AGCGAGGTATAGAGTCCCTACG.............................................................................22820.501.880.380.8817.380.00
.......................................................................................GAGGAACTTCATACCGTGCTCT......................................22820.380.130.504.8814.630.25
.......................................................................................TAGGAACTTCATGCCGTGCTCT......................................22820.000.500.505.389.004.63
.......................................................................................TAGGAACTTCATACCGTGCTCTTT....................................24819.753.000.259.137.380.00
.......................................................................................TAGGAACTGCATACCGTGCTC.......................................21818.880.000.001.3817.500.00
.......................................................................................TAGGATCTTCATACCGTGCTCT......................................22818.880.000.1316.502.250.00
.......................................................................................TAGGAACTCCATACCGTGCTCT......................................22818.630.880.386.5010.750.13
.......................................................................................TATGAACTTCATACCGTGCTCT......................................22818.381.630.003.889.503.38
................................................AGCGAGGTATAGAGTTCCCACG.............................................................................22818.382.130.251.0015.000.00
.......................................................................................TAGGAACTTTATACCGTGCTCT......................................22818.380.380.385.1311.501.00
................................................GGCGAGGTATAGAGTTCCTACG.............................................................................22818.258.000.000.389.880.00
.......................................................................................TAGGAACTTCATACCGTGCTTT......................................22817.380.130.384.7511.880.25
................................................AGCGAGGTATAGAGTTCCTAAG.............................................................................22817.380.131.383.2512.630.00
2 super_27:1146097-1146231 + 63.6
CCAAGA-TATTTTTTACCTGG--TTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTAT--AAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAA-GTGAATGCAAAAATCC-
CGAAAAGTATCTAAAGCGAAGCCTCTTTACCATCAGCGAGGTATAGAGTTCCTACGTGCCGTATCCAAAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCCATCAACGAACGTGAAACAGTGTATCTT
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
.........................................................................TAGGAACTTCATACCGTGCTCT........................................22822831.251053.25478.259339.2510779.881180.63
..................................AGCGAGGTATAGAGTTCCTACG...............................................................................22813041.753804.38365.13980.887890.880.50
.........................................................................TAGGAACTTCATACCGTGCTC.........................................2188908.00164.6326.003017.385583.00117.00
.........................................................................TAGGAACTTAATACCGTGCTCT........................................2282823.759.136.501227.131454.13126.88
.........................................................................TAGGAACTTAATACCGTGCTC.........................................2181101.002.500.25348.75745.134.38
.........................................................................TAGGAACTTCATACCGTGCT..........................................208504.2514.751.13183.75296.638.00
.........................................................................TAGGAACTTCATACCGTGCTCTT.......................................238420.7512.885.63163.88235.502.88
..................................AGCGAGGTATAGAGTTCCTAC................................................................................218320.5066.630.0023.38230.250.25
...................................GCGAGGTATAGAGTTCCTACG...............................................................................218247.88168.132.889.3867.500.00
..................................AGCGAGGTATAGAGTTCCT..................................................................................198227.6398.750.1311.38117.380.00
..................................AGCGAGGGATAGAGTTCCTACG...............................................................................228223.0010.130.754.63207.500.00
.........................................................................TAGGAACTTCATACCGCGCTCT........................................228202.750.750.6360.50140.250.63
.........................................................................TAGGAGCTTCATACCGTGCTCT........................................228194.881.130.6393.3899.750.00
..................................AGCGAGGTATAGAGTTCCTACGT..............................................................................238161.0024.880.2514.38121.500.00
.........................................................................TAGGAACTTCATACCGTGCTCC........................................228154.881.380.3818.5036.2598.38
..................................AGCGAGGTATAGAGTTCCTA.................................................................................208133.8816.880.0013.50103.500.00
.........................................................................TAGGAACTTCATACCGCGCTC.........................................21898.880.000.1319.1379.630.00
..................................AGCGAGGCATAGAGTTCCTACG...............................................................................22892.636.000.883.3882.380.00
.........................................................................TAGGAACTTCATACCGAGCTCT........................................22880.751.630.5021.7556.750.13
.........................................................................TAGGGACTTCATACCGTGCTCT........................................22879.381.130.6310.3866.500.75
.........................................................................TAGGAACGTCATACCGTGCTCT........................................22876.880.130.006.8869.880.00
.........................................................................TAGCAACTTCATACCGTGCTCT........................................22874.750.250.2516.3857.880.00
.........................................................................TAGGAACTTAATACCGTGCT..........................................20869.380.000.0027.2541.880.25
.........................................................................TAGGAAATTCATACCGTGCTCT........................................22862.000.130.8814.1346.630.25
..................................AGCGAGGAATAGAGTTCCTACG...............................................................................22859.634.880.132.1352.500.00
..................................AGCGAGGTATAGAGCTCCTACG...............................................................................22852.882.131.753.3845.630.00
.........................................................................TAGGAACTTAATACCGTGCTCTT.......................................23852.750.130.0021.5030.750.38
........................................................................CTAGGAACTTCATACCGTGCTCT........................................23852.501.131.0023.6326.750.00
.........................................................................TAGGAACTTCATACAGTGCTCT........................................22852.130.380.7513.3836.880.75
..................................AGCGAGGTATAGAGTTCCTACT...............................................................................22850.257.000.631.5041.130.00
.........................................................................TAGGAACTTCATACCGTGCTT.........................................21847.751.250.0012.8833.500.13
.........................................................................TAGGAACTTCAGACCGTGCTCT........................................22847.500.130.139.6337.500.13
.........................................................................TAGGAACTTCATACCGGGCTCT........................................22846.130.381.888.1335.000.75
..................................AGCGGGGTATAGAGTTCCTACG...............................................................................22845.133.380.380.8840.500.00
.........................................................................TAGGAACTTCATACCGTGCTCG........................................22844.130.250.253.139.8830.63
..................................AGAGAGGTATAGAGTTCCTACG...............................................................................22842.380.881.252.2538.000.00
.........................................................................TAGGAACTTCATACCGTCCTCT........................................22842.000.630.2512.6328.380.13
.........................................................................TAAGAACTTCATACCGTGCTCT........................................22841.750.750.3819.2521.130.25
.........................................................................TAGGAACTTCATACCGAGCTC.........................................21840.630.130.009.2531.250.00
.........................................................................TAGGAACGTCATACCGTGCTC.........................................21839.250.000.002.7536.500.00
..................................AGCGAGGTATAGAGTTACTACG...............................................................................22838.501.880.381.3834.880.00
.........................................................................TAGGAACTGCATACCGTGCTCT........................................22837.630.130.253.0034.250.00
..................................AGCGCGGTATAGAGTTCCTACG...............................................................................22837.001.250.001.5034.250.00
.........................................................................TAGGAACTTCACACCGTGCTCT........................................22836.880.880.7510.0025.000.25
..................................AGCGAGGTATAGAGTTCCTACA...............................................................................22836.754.380.633.8827.880.00
.........................................................................TAGGGACTTCATACCGTGCTC.........................................21836.000.630.003.2531.880.25
.........................................................................TAGGTACTTCATACCGTGCTCT........................................22835.880.381.507.8826.130.00
.........................................................................TAGCAACTTCATACCGTGCTC.........................................21835.380.000.004.0031.380.00
..................................AGCGAGGTATAGAGTTCCTACC...............................................................................22835.382.130.003.1330.130.00
.........................................................................TGGGAACTTCATACCGTGCTCT........................................22834.380.250.3810.1322.631.00
..................................AGCGAGGTATAGAGGTCCTACG...............................................................................22834.250.751.251.5030.750.00
.........................................................................TAGGCACTTCATACCGTGCTCT........................................22834.250.380.255.1328.250.25
.........................................................................TAGGAACTTCATAACGTGCTCT........................................22833.380.130.758.6323.880.00
.........................................................................TAGGAACTTCGTACCGTGCTCT........................................22833.251.251.0011.8819.000.13
..................................AGCGAGGTATAGAGTTCCGACG...............................................................................22833.250.500.880.6331.250.00
.........................................................................TAGGAACTTCATACCATGCTCT........................................22832.750.630.8812.8817.500.88
.........................................................................TAGGAGCTTCATACCGTGCTC.........................................21832.630.130.0015.2517.250.00
.........................................................................TAGGAAATTCATACCGTGCTC.........................................21832.130.000.135.5026.500.00
.........................................................................TAGGACCTTCATACCGTGCTCT........................................22832.000.130.0019.8812.000.00
.........................................................................TAGGAACTTCATACCTTGCTCT........................................22831.751.630.3810.1316.383.25
.........................................................................CAGGAACTTCATACCGTGCTCT........................................22831.500.750.387.5019.633.25
.........................................................................TAGGAACTTCATACCGTGCTCTA.......................................23831.380.380.1312.6318.250.00
.........................................................................TAGGAACTTCATACCCTGCTCT........................................22830.380.130.636.5022.250.88
..................................AGCGAGGTATAGAGTTCCTATG...............................................................................22829.501.500.751.1326.130.00
.........................................................................TAGGAACTTCATACCGTGATCT........................................22829.380.750.1314.7513.750.00
.........................................................................TAGGAACTTCATACTGTGCTCT........................................22829.130.750.7512.6314.500.50
..................................AGCGAGGTATAGAGTTCCTCCG...............................................................................22828.500.250.632.7524.880.00
.........................................................................TAGGAACTTCATACCGTGCTAT........................................22827.880.251.3816.259.880.13
.........................................................................TAGGAACTTAATACCGCGCTCT........................................22827.380.000.138.3818.880.00
.........................................................................TAGGAACTTCATACCGTGCGCT........................................22827.250.130.135.0022.000.00
.........................................................................AAGGAACTTCATACCGTGCTCT........................................22827.000.500.005.8819.501.13
.........................................................................TAGGAACTTCATACCGTGCCCT........................................22827.000.380.389.2515.881.13
.........................................................................TAGGAACTTCATACCGTTCTCT........................................22826.130.750.009.1315.251.00
.........................................................................TAGGAATTTCATACCGTGCTCT........................................22825.630.630.255.8818.750.13
..................................AGCGAGGTATAGAGTTCATACG...............................................................................22825.501.131.002.1321.250.00
..................................AGCGAGGTATAGAGATCCTACG...............................................................................22823.500.000.750.6322.130.00
.........................................................................TAGGAACTTCATACCGTCCTC.........................................21823.500.130.004.5018.880.00
.........................................................................TAGGAACCTCATACCGTGCTCT........................................22822.880.880.256.0015.130.63
.........................................................................TAGGAACTTCAGACCGTGCTC.........................................21822.250.000.002.6319.630.00
.........................................................................TAGGAACTTCCTACCGTGCTCT........................................22822.130.001.005.3815.750.00
..................................AGCGAGGTATAGCGTTCCTACG...............................................................................22822.000.380.501.0020.130.00
.........................................................................TAGGAACTTCATACAGTGCTC.........................................21822.000.130.004.5017.380.00
..................................AGCGAGGTATACAGTTCCTACG...............................................................................22822.000.500.250.8820.380.00
..................................AGCGAGGTATAGTGTTCCTACG...............................................................................22821.880.131.000.3820.380.00
.........................................................................TAGGAACTTCATACCGGGCTC.........................................21821.630.130.002.3819.130.00
........................................................................CTAGGAACTTCATACCGTGCTC.........................................22821.380.380.008.2512.750.00
.........................................................................TAGGAAGTTCATACCGTGCTCT........................................22821.130.000.252.0018.880.00
.........................................................................TAGGAACTTCATACCGTACTCT........................................22820.630.500.139.389.631.00
..................................AGCGAGGTATAGAGTCCCTACG...............................................................................22820.501.880.380.8817.380.00
.........................................................................GAGGAACTTCATACCGTGCTCT........................................22820.380.130.504.8814.630.25
.........................................................................TAGGAACTTCATGCCGTGCTCT........................................22820.000.500.505.389.004.63
.........................................................................TAGGAACTTCATACCGTGCTCTTT......................................24819.753.000.259.137.380.00
.........................................................................TAGGAACTGCATACCGTGCTC.........................................21818.880.000.001.3817.500.00
.........................................................................TAGGATCTTCATACCGTGCTCT........................................22818.880.000.1316.502.250.00
.........................................................................TAGGAACTCCATACCGTGCTCT........................................22818.630.880.386.5010.750.13
.........................................................................TATGAACTTCATACCGTGCTCT........................................22818.381.630.003.889.503.38
.........................................................................TAGGAACTTTATACCGTGCTCT........................................22818.380.380.385.1311.501.00
..................................AGCGAGGTATAGAGTTCCCACG...............................................................................22818.382.130.251.0015.000.00
..................................GGCGAGGTATAGAGTTCCTACG...............................................................................22818.258.000.000.389.880.00
.........................................................................TAGGAACTTCATACCGTGCTTT........................................22817.380.130.384.7511.880.25
..................................AGCGAGGTATAGAGTTCCTAAG...............................................................................22817.380.131.383.2512.630.00


droWil1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scaffold_181024:222598-222734 - 74.64
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC----------------CAAGTGAATGCAAAAATCC
CTGA-AAATATGCTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTTAATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACGTTACGAAAACAGCAACAAG--------AAAAAAC
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
......................................................................TAGGAACTTCATACCGTGCTCT......................................................226170815.831509.0017569.8338694.00113043.00
...............................AGCGAGGTATAGAGTTCCTACG.............................................................................................226126047.1710318.3310612.17105052.6764.00
......................................................................TAGGAACTTAATACCGTGCTCT......................................................22660508.5016.67235.672780.1757476.00
......................................................................TAGGAACTTCATACCGTGCTC.......................................................21613324.17153.17210.832665.5010294.67
......................................................................TAGGAACTTCATACCGTGCTCC......................................................22613033.504.5015.1774.3312939.50
......................................................................TAGGAACTTAATACCGTGCTCC......................................................2266419.330.000.335.836413.17
......................................................................TAGGAACTTAATACCGTGCTC.......................................................2163898.503.674.00400.833490.00
......................................................................TAGGAACTTCATACCGTGCT........................................................2062636.6719.8333.67173.672409.50
......................................................................TAGGAACTTCATACCGTGCTCG......................................................2262166.500.502.333.502160.17
......................................................................TAGGAACTTAATACCGTGCTCG......................................................2261087.170.000.170.171086.83
...............................AGCGAGGTATAGAGTTCCT................................................................................................1961052.0050.838.00986.676.50
................................GCGAGGTATAGAGTTCCTACG.............................................................................................2161032.83244.5039.50748.170.67
......................................................................TAGGAACTTAATACCGTGCT........................................................206888.500.000.1720.00868.33
......................................................................TAGGAACTTCATACCGTGCTCTT.....................................................236610.6717.5029.83225.17338.17
......................................................................TAGGAACTTCATACCTTGCTCT......................................................226576.672.0033.1774.33467.17
......................................................................TAGGAACTTAATACCTTGCTCT......................................................226531.170.000.506.00524.67
...............................AGCGAGGTATAGAGTTCCTAAG.............................................................................................226501.501.338.50491.500.17
...............................AGCGAGGTATAGAGTTCATACG.............................................................................................226422.831.0021.67400.170.00
......................................................................TAGGAACTTCATGCCGTGCTCT......................................................226414.671.008.8326.83378.00
...............................AGCGCGGTATAGAGTTCCTACG.............................................................................................226407.008.8346.33351.830.00
...............................AGCGAGGTATAGAGTTCCTAC..............................................................................................216379.0093.8325.50257.831.83
......................................................................TATGAACTTCATACCGTGCTCT......................................................226359.670.3353.1759.67246.50
...............................CGCGAGGTATAGAGTTCCTACG.............................................................................................226351.502.831.50347.170.00
...............................AGCGAGGCATAGAGTTCCTACG.............................................................................................226348.6720.8344.17283.670.00
...............................AGCGAGGTATAGAGTTCCTACA.............................................................................................226335.0011.336.83316.830.00
...............................AGCGAGGTATAGAGTTACTACG.............................................................................................226334.001.3312.83319.830.00
...............................AGAGAGGTATAGAGTTCCTACG.............................................................................................226300.001.6714.83283.330.17
...............................AGCGAGGTATAAAGTTCCTACG.............................................................................................226267.172.173.50261.500.00
......................................................................TAGGAACTTCATACCGTGCC........................................................206247.170.000.500.50246.17
.....................................................................CTAGGAACTTCATACCGTGCTCT......................................................236225.501.5061.33133.8328.83
......................................................................TAGGAACTTCATACAGTGCTCT......................................................226222.670.3330.83138.1753.33
......................................................................TAGGAGCTTCATACCGTGCTCT......................................................226214.833.0018.17133.3360.33
......................................................................TAGGAACTTAATACCxTGCTCT......................................................216214.500.000.171.67212.67
......................................................................TAGGCACTTCATACCGTGCTCT......................................................226200.671.0055.67108.8335.17
...............................TGCGAGGTATAGAGTTCCTACG.............................................................................................226200.001.670.83197.500.00
......................................................................TAGGAACTTAATGCCGTGCTCT......................................................226199.000.000.002.83196.17
......................................................................TAGGAACTTCATACCGGGCTCT......................................................226197.002.839.3320.00164.83
......................................................................TAGGAACTTCATACCxTGCTCT......................................................216193.000.334.3313.83174.50
...............................AGCGAGGTATAGAGCTCCTACG.............................................................................................226190.8311.1714.67165.000.00
......................................................................CAGGAACTTCATACCGTGCTCT......................................................226189.830.5017.17127.3344.83
...............................AGCGAGGAATAGAGTTCCTACG.............................................................................................226187.8312.508.33166.830.17
......................................................................TAGGAACTTCATACCGTGCCCT......................................................226182.672.6715.5043.83120.67
......................................................................TAGGAACTTCATACCGTGCTAT......................................................226182.170.3326.17144.6711.00
......................................................................TAGGAACTTCATACCGCGCTCT......................................................226181.002.6735.1765.6777.50
...............................AGCGAGGTATAGAGTCCCTACG.............................................................................................226179.3313.338.33157.670.00
......................................................................TAGGAACTTAATACCGTGCTCTT.....................................................236177.000.330.8322.50153.33
......................................................................TAGGAACTTCATACCGTGATCT......................................................226175.500.0024.17145.505.83
...............................AGCGGGGTATAGAGTTCCTACG.............................................................................................226168.009.3313.00145.670.00
...............................AGCAAGGTATAGAGTTCCTACG.............................................................................................226162.336.337.67148.000.33
...............................AGCGAAGTATAGAGTTCCTACG.............................................................................................226162.004.504.17153.330.00
......................................................................TAGGGACTTCATACCGTGCTCT......................................................226161.501.1720.3353.3386.67
......................................................................TAGGAACTTCATACCATGCTCT......................................................226161.171.3323.0073.1763.67
......................................................................TACGAACTTCATACCGTGCTCT......................................................226160.830.839.6744.00106.33
...............................AGCGAGGTATAGAGTTCCTACT.............................................................................................226156.3317.1719.67119.170.33
......................................................................TAGGAACTTCATACTGTGCTCT......................................................226154.170.8316.8366.0070.50
...............................AGCGAGGTATAGAGTTCCCACG.............................................................................................226147.678.337.50131.830.00
...............................AGCGAGGTATAGAATTCCTACG.............................................................................................226147.172.673.00141.330.17
......................................................................TAGGAACTTCATACCGTGC.........................................................196146.670.501.0018.17127.00
...............................AGCGAGGTACAGAGTTCCTACG.............................................................................................226145.8310.007.33128.500.00
...............................ATCGAGGTATAGAGTTCCTACG.............................................................................................226142.837.6724.33110.000.83
......................................................................TATGAACTTAATACCGTGCTCT......................................................226141.330.001.174.17136.00
...............................AACGAGGTATAGAGTTCCTACG.............................................................................................226138.335.834.00128.500.00
...............................AGCGAGGTATAGAGTTCCTACC.............................................................................................226137.8314.509.33113.830.17
......................................................................TGGGAACTTCATACCGTGCTCT......................................................226134.831.178.8339.8385.00
......................................................................TAGTAACTTCATACCGTGCTCT......................................................226134.501.5029.0044.6759.33
...............................GGCGAGGTATAGAGTTCCTACG.............................................................................................226131.337.007.50116.830.00
...............................AGCGAGGTATGGAGTTCCTACG.............................................................................................226130.338.508.17113.670.00
...............................AGCGAGGTATAGAGTTCCTCCG.............................................................................................226129.337.509.17112.670.00
......................................................................TAGGAACTTCATACCGTTCTCT......................................................226125.671.8329.1742.5052.17
...............................AGCGATGTATAGAGTTCCTACG.............................................................................................226124.333.0021.00100.330.00
........................................................................TGAACTTCATACCGTGCTCT......................................................206123.330.008.8321.8392.67
......................................................................TAGGAACCTCATACCGTGCTCT......................................................226123.001.0020.8356.8344.33
...............................AGCGAGGTGTAGAGTTCCTACG.............................................................................................226120.008.509.33101.830.33
......................................................................TAGGAACTTCATACCGTACTCT......................................................226118.671.179.6764.3343.50
...............................AGCGAGGTATATAGTTCCTACG.............................................................................................226117.333.8320.3393.170.00
......................................................................TAGGAACTTCATAACGTGCTCT......................................................226115.670.178.67100.676.17
...............................AGCGAGGTATCGAGTTCCTACG.............................................................................................226114.503.674.67106.170.00
...............................AGCTAGGTATAGAGTTCCTACG.............................................................................................226114.334.1725.3384.830.00
...............................AGCGAGGTATAGCGTTCCTACG.............................................................................................226114.0015.1710.0088.830.00
......................................................................TAGGAACTTCGTACCGTGCTCT......................................................226112.502.0014.1745.1751.17
...............................AGCGAGGTATAGGGTTCCTACG.............................................................................................226112.507.839.0095.670.00
......................................................................TAGGAACTTCACACCGTGCTCT......................................................226112.001.8317.0051.6741.50
......................................................................TAGGAACTTCATCCCGTGCTCT......................................................226109.670.504.6719.6784.83
...............................AGTGAGGTATAGAGTTCCTACG.............................................................................................226108.176.837.6793.670.00
...............................ACCGAGGTATAGAGTTCCTACG.............................................................................................226101.838.506.0087.330.00
...............................AGCGAGGGATAGAGTTCCTACG.............................................................................................226100.676.509.1783.831.17
......................................................................TAGAAACTTCATACCGTGCTCT......................................................226100.500.678.6767.0024.17
...............................AGCGAGGTATAGAGTTTCTACG.............................................................................................22699.834.673.8391.330.00
...............................AGCGAGGTATAGAGTTCTTACG.............................................................................................22699.672.832.3394.330.17
......................................................................TAGGAACTTAATACCGGGCTCT......................................................22699.000.000.001.6797.33
......................................................................TAGGAACTTTATACCGTGCTCT......................................................22698.171.337.3328.5061.00
......................................................................TAGGAACTCCATACCGTGCTCT......................................................22698.171.0015.1751.5030.50
...............................AGCGAGGTATAGAGTTCCTA...............................................................................................20698.0029.673.8363.670.83
...............................AGCGAGGTATAGATTTCCTACG.............................................................................................22697.674.679.3383.330.33
...............................AGCGAGGxxTAGAGTTCCTACG.............................................................................................20695.004.508.6781.830.00
...............................AGCGAGGTATAGAGATCCTACG.............................................................................................22695.000.502.1792.330.00
.......................................................................TAGAACTTCATACCGTGCTCT......................................................212283.502.5025.0072.50183.50
...............................AGCGAGGTATAGACTTCCTACG.............................................................................................22694.504.675.0084.670.17
...............................AGCGAGGTATAGAGTTCCTATG.............................................................................................22694.334.508.0081.830.00
......................................................................TAGGAACTTCATACCCTGCTCT......................................................22692.670.8310.0030.8351.00
......................................................................TAGGAACTTAATACCGTGCC........................................................20692.500.000.000.0092.50
5 scaffold_181024:290393-290494 - 55.32
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAA-ACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CCTA------------------TTTACCATAAGCGAGGTATAGAGTTCCTACGTGCAAATTGCAATAATCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGAACAACAAAATGAA-----------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.......................................................................TAGGAACTTCATACCGTGCTCT......................................226170815.831509.0017569.8338694.00113043.00
...............................AGCGAGGTATAGAGTTCCTACG..............................................................................226126047.1710318.3310612.17105052.6764.00
.......................................................................TAGGAACTTAATACCGTGCTCT......................................22660508.5016.67235.672780.1757476.00
.......................................................................TAGGAACTTCATACCGTGCTC.......................................21613324.17153.17210.832665.5010294.67
.......................................................................TAGGAACTTCATACCGTGCTCC......................................22613033.504.5015.1774.3312939.50
.......................................................................TAGGAACTTAATACCGTGCTCC......................................2266419.330.000.335.836413.17
.......................................................................TAGGAACTTAATACCGTGCTC.......................................2163898.503.674.00400.833490.00
.......................................................................TAGGAACTTCATACCGTGCT........................................2062636.6719.8333.67173.672409.50
.......................................................................TAGGAACTTCATACCGTGCTCG......................................2262166.500.502.333.502160.17
.......................................................................TAGGAACTTAATACCGTGCTCG......................................2261087.170.000.170.171086.83
...............................AGCGAGGTATAGAGTTCCT.................................................................................1961052.0050.838.00986.676.50
................................GCGAGGTATAGAGTTCCTACG..............................................................................2161032.83244.5039.50748.170.67
.......................................................................TAGGAACTTAATACCGTGCT........................................206888.500.000.1720.00868.33
.......................................................................TAGGAACTTCATACCGTGCTCTT.....................................236610.6717.5029.83225.17338.17
.......................................................................TAGGAACTTCATACCTTGCTCT......................................226576.672.0033.1774.33467.17
.......................................................................TAGGAACTTAATACCTTGCTCT......................................226531.170.000.506.00524.67
...............................AGCGAGGTATAGAGTTCCTAAG..............................................................................226501.501.338.50491.500.17
...............................AGCGAGGTATAGAGTTCATACG..............................................................................226422.831.0021.67400.170.00
.......................................................................TAGGAACTTCATGCCGTGCTCT......................................226414.671.008.8326.83378.00
...............................AGCGCGGTATAGAGTTCCTACG..............................................................................226407.008.8346.33351.830.00
...............................AGCGAGGTATAGAGTTCCTAC...............................................................................216379.0093.8325.50257.831.83
.......................................................................TATGAACTTCATACCGTGCTCT......................................226359.670.3353.1759.67246.50
...............................CGCGAGGTATAGAGTTCCTACG..............................................................................226351.502.831.50347.170.00
...............................AGCGAGGCATAGAGTTCCTACG..............................................................................226348.6720.8344.17283.670.00
...............................AGCGAGGTATAGAGTTCCTACA..............................................................................226335.0011.336.83316.830.00
...............................AGCGAGGTATAGAGTTACTACG..............................................................................226334.001.3312.83319.830.00
...............................AGAGAGGTATAGAGTTCCTACG..............................................................................226300.001.6714.83283.330.17
...............................AGCGAGGTATAAAGTTCCTACG..............................................................................226267.172.173.50261.500.00
.......................................................................TAGGAACTTCATACCGTGCC........................................206247.170.000.500.50246.17
......................................................................CTAGGAACTTCATACCGTGCTCT......................................236225.501.5061.33133.8328.83
.......................................................................TAGGAACTTCATACAGTGCTCT......................................226222.670.3330.83138.1753.33
.......................................................................TAGGAGCTTCATACCGTGCTCT......................................226214.833.0018.17133.3360.33
.......................................................................TAGGAACTTAATACCxTGCTCT......................................216214.500.000.171.67212.67
.......................................................................TAGGCACTTCATACCGTGCTCT......................................226200.671.0055.67108.8335.17
...............................TGCGAGGTATAGAGTTCCTACG..............................................................................226200.001.670.83197.500.00
.......................................................................TAGGAACTTAATGCCGTGCTCT......................................226199.000.000.002.83196.17
.......................................................................TAGGAACTTCATACCGGGCTCT......................................226197.002.839.3320.00164.83
.......................................................................TAGGAACTTCATACCxTGCTCT......................................216193.000.334.3313.83174.50
...............................AGCGAGGTATAGAGCTCCTACG..............................................................................226190.8311.1714.67165.000.00
.......................................................................CAGGAACTTCATACCGTGCTCT......................................226189.830.5017.17127.3344.83
...............................AGCGAGGAATAGAGTTCCTACG..............................................................................226187.8312.508.33166.830.17
.......................................................................TAGGAACTTCATACCGTGCCCT......................................226182.672.6715.5043.83120.67
.......................................................................TAGGAACTTCATACCGTGCTAT......................................226182.170.3326.17144.6711.00
.......................................................................TAGGAACTTCATACCGCGCTCT......................................226181.002.6735.1765.6777.50
...............................AGCGAGGTATAGAGTCCCTACG..............................................................................226179.3313.338.33157.670.00
.......................................................................TAGGAACTTAATACCGTGCTCTT.....................................236177.000.330.8322.50153.33
.......................................................................TAGGAACTTCATACCGTGATCT......................................226175.500.0024.17145.505.83
...............................AGCGGGGTATAGAGTTCCTACG..............................................................................226168.009.3313.00145.670.00
...............................AGCAAGGTATAGAGTTCCTACG..............................................................................226162.336.337.67148.000.33
...............................AGCGAAGTATAGAGTTCCTACG..............................................................................226162.004.504.17153.330.00
.......................................................................TAGGGACTTCATACCGTGCTCT......................................226161.501.1720.3353.3386.67
.......................................................................TAGGAACTTCATACCATGCTCT......................................226161.171.3323.0073.1763.67
.......................................................................TACGAACTTCATACCGTGCTCT......................................226160.830.839.6744.00106.33
...............................AGCGAGGTATAGAGTTCCTACT..............................................................................226156.3317.1719.67119.170.33
.......................................................................TAGGAACTTCATACTGTGCTCT......................................226154.170.8316.8366.0070.50
...............................AGCGAGGTATAGAGTTCCCACG..............................................................................226147.678.337.50131.830.00
...............................AGCGAGGTATAGAATTCCTACG..............................................................................226147.172.673.00141.330.17
.......................................................................TAGGAACTTCATACCGTGC.........................................196146.670.501.0018.17127.00
...............................AGCGAGGTACAGAGTTCCTACG..............................................................................226145.8310.007.33128.500.00
...............................ATCGAGGTATAGAGTTCCTACG..............................................................................226142.837.6724.33110.000.83
.......................................................................TATGAACTTAATACCGTGCTCT......................................226141.330.001.174.17136.00
...............................AACGAGGTATAGAGTTCCTACG..............................................................................226138.335.834.00128.500.00
...............................AGCGAGGTATAGAGTTCCTACC..............................................................................226137.8314.509.33113.830.17
.......................................................................TGGGAACTTCATACCGTGCTCT......................................226134.831.178.8339.8385.00
.......................................................................TAGTAACTTCATACCGTGCTCT......................................226134.501.5029.0044.6759.33
...............................GGCGAGGTATAGAGTTCCTACG..............................................................................226131.337.007.50116.830.00
...............................AGCGAGGTATGGAGTTCCTACG..............................................................................226130.338.508.17113.670.00
...............................AGCGAGGTATAGAGTTCCTCCG..............................................................................226129.337.509.17112.670.00
.......................................................................TAGGAACTTCATACCGTTCTCT......................................226125.671.8329.1742.5052.17
...............................AGCGATGTATAGAGTTCCTACG..............................................................................226124.333.0021.00100.330.00
.........................................................................TGAACTTCATACCGTGCTCT......................................206123.330.008.8321.8392.67
.......................................................................TAGGAACCTCATACCGTGCTCT......................................226123.001.0020.8356.8344.33
...............................AGCGAGGTGTAGAGTTCCTACG..............................................................................226120.008.509.33101.830.33
.......................................................................TAGGAACTTCATACCGTACTCT......................................226118.671.179.6764.3343.50
...............................AGCGAGGTATATAGTTCCTACG..............................................................................226117.333.8320.3393.170.00
.......................................................................TAGGAACTTCATAACGTGCTCT......................................226115.670.178.67100.676.17
...............................AGCGAGGTATCGAGTTCCTACG..............................................................................226114.503.674.67106.170.00
...............................AGCTAGGTATAGAGTTCCTACG..............................................................................226114.334.1725.3384.830.00
...............................AGCGAGGTATAGCGTTCCTACG..............................................................................226114.0015.1710.0088.830.00
.......................................................................TAGGAACTTCGTACCGTGCTCT......................................226112.502.0014.1745.1751.17
...............................AGCGAGGTATAGGGTTCCTACG..............................................................................226112.507.839.0095.670.00
.......................................................................TAGGAACTTCACACCGTGCTCT......................................226112.001.8317.0051.6741.50
.......................................................................TAGGAACTTCATCCCGTGCTCT......................................226109.670.504.6719.6784.83
...............................AGTGAGGTATAGAGTTCCTACG..............................................................................226108.176.837.6793.670.00
...............................ACCGAGGTATAGAGTTCCTACG..............................................................................226101.838.506.0087.330.00
...............................AGCGAGGGATAGAGTTCCTACG..............................................................................226100.676.509.1783.831.17
.......................................................................TAGAAACTTCATACCGTGCTCT......................................226100.500.678.6767.0024.17
...............................AGCGAGGTATAGAGTTTCTACG..............................................................................22699.834.673.8391.330.00
...............................AGCGAGGTATAGAGTTCTTACG..............................................................................22699.672.832.3394.330.17
.......................................................................TAGGAACTTAATACCGGGCTCT......................................22699.000.000.001.6797.33
.......................................................................TAGGAACTCCATACCGTGCTCT......................................22698.171.0015.1751.5030.50
.......................................................................TAGGAACTTTATACCGTGCTCT......................................22698.171.337.3328.5061.00
...............................AGCGAGGTATAGAGTTCCTA................................................................................20698.0029.673.8363.670.83
...............................AGCGAGGTATAGATTTCCTACG..............................................................................22697.674.679.3383.330.33
...............................AGCGAGGxxTAGAGTTCCTACG..............................................................................20695.004.508.6781.830.00
...............................AGCGAGGTATAGAGATCCTACG..............................................................................22695.000.502.1792.330.00
...............................AGCGAGGTATAGACTTCCTACG..............................................................................22694.504.675.0084.670.17
...............................AGCGAGGTATAGAGTTCCTATG..............................................................................22694.334.508.0081.830.00
.......................................................................TAGGAACTTCATACCCTGCTCT......................................22692.670.8310.0030.8351.00
.......................................................................TAGGAACTTAATACCGTGCC........................................20692.500.000.000.0092.50
.......................................................................TAGGAACTTCATACCGTCCTCT......................................22683.000.5014.5040.6727.33


droVir3 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scaffold_13049:16143973-16144087 + 74.42
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
TGAAAATATG--CTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCAATTTATATACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACGAAGTG-------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
......................................................................TAGGAACTTCATACCGTGCTCT......................................22847705.002765.8817801.88789.004224.6322123.63
...............................AGCGAGGTATAGAGTTCCTACG.............................................................................22826523.6319760.755020.001725.005.6312.25
......................................................................TAGGAACTTAATACCGTGCTCT......................................22810370.8812.252040.637.50151.638158.88
......................................................................TAGGAACTTCATACCGTGCTC.......................................2187275.00296.003328.757.38622.753020.13
......................................................................TAGGAACTTCATACCGTGCTCC......................................2283898.632.7531.500.63466.753397.00
......................................................................TAGGAACTTAATACCGTGCTC.......................................2181361.751.25453.750.0013.38893.38
......................................................................TAGGAACTTCATACCGTGCT........................................2081273.1332.00278.000.38141.25821.50
......................................................................TAGGAACTTAATACCGTGCTCC......................................2281243.130.002.750.0017.501222.88
................................GCGAGGTATAGAGTTCCTACG.............................................................................2181027.88851.00168.008.500.000.38
......................................................................TAGGAACTTCATACCGTGCTCG......................................228956.752.8813.380.25170.13770.13
......................................................................TAGGAACTTCATACCGTGCTCTT.....................................238685.1395.00387.505.3846.88150.38
...............................AGCGAGGTATAGAGTTCCTAC..............................................................................218330.00248.2577.633.380.250.50
...............................AGCGAGGTATAGAGTTCCT................................................................................198313.38157.25147.500.501.256.88
......................................................................TAGGAACTTAATACCGTGCT........................................208295.880.0032.000.003.38260.50
......................................................................TAGGAACTTAATACCGTGCTCG......................................228274.130.002.630.005.88265.63
......................................................................TAGGAAATTCATACCGTGCTCT......................................228225.631.88214.751.001.386.63
...............................AGCGAGGTATAGAGTTCCTACT.............................................................................228200.50158.5020.5021.250.130.13
......................................................................TAGGAACTTCATACCGCGCTCT......................................228166.254.13140.756.002.7512.63
...............................AGCGAGGGATAGAGTTCCTACG.............................................................................228139.7553.0076.0010.750.000.00
......................................................................TAGGAACTTCATACCGTGCC........................................208129.880.132.130.0013.38114.25
...............................AGCGAGGTATAGAGTTCCTACGT............................................................................238113.6376.8835.880.750.000.13
...............................AGCGAGGTATAGAGTTCCTA...............................................................................208106.6370.7535.250.250.250.13
...............................AGCGAGGCATAGAGTTCCTACG.............................................................................22890.3853.1328.888.380.000.00
......................................................................TAGGAACTTCATACCTTGCTCT......................................22888.004.2523.384.8811.1344.38
......................................................................TAGGAACTTAATACCGTGCTCTT.....................................23880.630.2531.500.001.2547.63
......................................................................TAGGAACTTCATACCGTGCCCT......................................22877.633.1337.001.257.1329.13
......................................................................TAGGAGCTTCATACCGTGCTCT......................................22876.883.5057.131.503.3811.38
......................................................................TAGGAACTTCATACCGAGCTCT......................................22876.005.3866.881.750.251.75
......................................................................TAGGAACTTCATACCGTTCTCT......................................22875.502.0054.889.751.757.13
......................................................................TAGCAACTTCATACCGTGCTCT......................................22872.881.3866.252.500.502.25
......................................................................TAGGAACTTCATACCGGGCTCT......................................22869.133.6347.252.882.7512.63
......................................................................TAGGAACGTCATACCGTGCTCT......................................22867.000.0065.380.380.251.00
...............................AGCGAGGTATAGAGCTCCTACG.............................................................................22865.3833.0024.388.000.000.00
.....................................................................CTAGGAACTTCATACCGTGCTCT......................................23860.133.7549.131.880.385.00
......................................................................TAGGAACTTCATACCGTGCTT.......................................21859.633.5027.250.005.7523.13
...............................AGCGAGGTATAGAGTTCCTACA.............................................................................22858.7543.8811.383.500.000.00
......................................................................TAGGAACTTCATACCGTGC.........................................19858.130.134.500.005.6347.88
......................................................................TGGGAACTTCATACCGTGCTCT......................................22857.751.6333.130.505.1317.38
......................................................................TAGGAACTTCATACAGTGCTCT......................................22856.004.0041.250.501.638.63
......................................................................CAGGAACTTCATACCGTGCTCT......................................22854.132.0039.880.632.758.88
......................................................................TAGGAACTTCATACCGTGCG........................................20852.250.000.500.007.2544.50
......................................................................TAGGGACTTCATACCGTGCTCT......................................22851.883.0034.503.002.508.88
......................................................................TAGGAACTTCATAACGTGCTCT......................................22851.001.8843.630.380.384.75
......................................................................TAGGAACTTCATACTGTGCTCT......................................22849.631.5031.751.131.8813.38
......................................................................TAGGAACTTCATACCGTGCTCTTT....................................24849.0012.0027.750.255.133.88
......................................................................TAGGAACTTCAGACCGTGCTCT......................................22846.000.5044.130.750.130.50
...............................AGCGAGGTATAGAGTTCCTACC.............................................................................22844.6323.6313.757.250.000.00
...............................AGCGAGGAATAGAGTTCCTACG.............................................................................22844.5020.1322.002.380.000.00
......................................................................TAGGACCTTCATACCGTGCTCT......................................22844.380.2542.500.380.251.00
...............................AGCGAGGTATAGAGTTCCTCCG.............................................................................22843.757.7522.1313.880.000.00
......................................................................TATGAACTTCATACCGTGCTCT......................................22842.381.5010.634.009.7516.50
......................................................................TAGGAACTTCATACCGTGCTCTA.....................................23842.007.1326.750.252.635.25
......................................................................TAGGAACTCCATACCGTGCTCT......................................22841.251.2529.751.131.757.38
......................................................................TAGGAAATTCATACCGTGCTC.......................................21841.250.0040.000.000.131.13
...............................AGCGAGGTATAGAGATCCTACG.............................................................................22841.2524.3813.383.500.000.00
......................................................................TAGGAACTTCATACCATGCTCT......................................22840.633.2520.131.502.5013.25
...............................AGCGAGGTATAGAGTTACTACG.............................................................................22839.8819.3817.003.500.000.00
......................................................................TAGGAACTTCGTACCGTGCTCT......................................22839.252.3823.381.380.7511.38
......................................................................TAGGAACTTCATACCGTCCTCT......................................22839.252.7530.501.380.753.88
......................................................................TAGGAACTTCACACCGTGCTCT......................................22838.382.2522.751.001.3811.00
......................................................................TAGGTACTTCATACCGTGCTCT......................................22837.750.5035.001.630.250.38
......................................................................TAGGAACTTAATACCGTGCC........................................20837.130.000.500.000.7535.88
......................................................................TAGGAACTTAATACCTTGCTCT......................................22836.880.003.000.001.6332.25
......................................................................TAGGAACTTCATGCCGTGCTCT......................................22836.751.8814.130.883.0016.88
...............................AGCGAGGTATAGAGTTCATACG.............................................................................22835.8828.386.750.750.000.00
...............................AGCGAGGTATAGAGGTCCTACG.............................................................................22835.7510.1313.8811.750.000.00
......................................................................TAGGAACTTGATACCGTGCTCT......................................22834.500.2530.750.130.253.13
...............................AGCGGGGTATAGAGTTCCTACG.............................................................................22834.3819.3810.884.000.130.00
......................................................................TAGGAACCTCATACCGTGCTCT......................................22833.132.0015.501.002.0012.63
...............................AGCGAGGTATAGAGTTCCCACG.............................................................................22833.1321.637.753.750.000.00
...............................AGCGAGGTATAGAGTCCCTACG.............................................................................22833.0024.136.632.250.000.00
......................................................................TAGGCACTTCATACCGTGCTCT......................................22832.632.7525.501.380.502.50
...............................AGCGCGGTATAGAGTTCCTACG.............................................................................22831.6317.0011.133.500.000.00
......................................................................TAGGAACTTTATACCGTGCTCT......................................22831.251.7515.380.631.3812.13
......................................................................TAGGAACTTCATACCGCGCTC.......................................21831.000.6328.750.000.251.38
...............................AGCGAGGTATATAGTTCCTACG.............................................................................22831.008.389.5013.130.000.00
...............................AGCGAGGTAGAGAGTTCCTACG.............................................................................22830.250.6328.381.250.000.00
......................................................................TAGGAACTTCATACCCTGCTCT......................................22829.882.7518.881.251.006.00
......................................................................TAGGAAATTAATACCGTGCTCT......................................22829.750.0027.000.000.002.75
......................................................................TAGGAACTTCATACCGTACTCT......................................22829.384.8812.751.001.009.75
...............................AGCGAGGTATAGCGTTCCTACG.............................................................................22827.639.2514.254.130.000.00
...............................AGCGAGGTATAGAGTTCCGACG.............................................................................22827.632.2521.633.750.000.00
......................................................................TAGGAACTTCATACCGTGCTCTC.....................................23827.252.008.750.637.758.13
...............................AGCGAGGTATAGAGTTCCTAAG.............................................................................22827.1315.889.252.000.000.00
......................................................................TAGGAACTTCATACCxTGCTCT......................................21826.131.251.000.134.0019.75
......................................................................TAGGAACTTCATACCGTGCTCTG.....................................23825.382.8817.880.130.753.75
......................................................................TAAGAACTTCATACCGTGCTCT......................................22825.130.2519.751.500.633.00
...............................AGCGAGGTATAGGGTTCCTACG.............................................................................22824.5015.256.752.500.000.00
...............................AGCGAGGTATAGAGTTCCTATG.............................................................................22823.887.8814.251.750.000.00
...............................AGCGAGGTATAGAGTTCC.................................................................................18823.630.8812.500.131.139.00
......................................................................TAGGAACTTCATACCGTGCGCT......................................22823.500.6319.130.630.502.63
......................................................................TAGGAACTGCATACCGTGCTCT......................................22823.380.0022.750.250.130.25
......................................................................TAGGAACTTCATACCGTGCTAT......................................22823.131.2514.880.750.635.63
......................................................................TACGAACTTCATACCGTGCTCT......................................22823.131.008.752.003.388.00
...............................AGCGAGGTATACAGTTCCTACG.............................................................................22822.388.757.386.250.000.00
.......................................................................AGGAACTTCATACCGTGCTCT......................................21822.131.387.380.132.5010.75
...............................AGCGAGGTGTAGAGTTCCTACG.............................................................................22821.7515.134.502.000.130.00
...............................AGCGAGGTATGGAGTTCCTACG.............................................................................22821.6313.886.381.380.000.00
......................................................................TAGGAACTTAATACCGCGCTCT......................................22821.250.0016.000.000.135.13
.................................CGAGGTATAGAGTTCCTACG.............................................................................20821.2518.252.880.130.000.00
......................................................................TAGGAACTTCATACCGTGATCT......................................22821.251.1311.750.880.756.75
3 scaffold_13049:16093230-16093333 + 61.71
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCA--TTATAA-ACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
------------------------TACCATCAGCGAGGTATAGAGTTCCTACGTGCAAATTGCAATAATCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCAGC-AAGA-AAAGAAA-AAAAC
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
.......................................................................TAGGAACTTCATACCGTGCTCT......................................22847705.002765.8817801.88789.004224.6322123.63
...............................AGCGAGGTATAGAGTTCCTACG..............................................................................22826523.6319760.755020.001725.005.6312.25
.......................................................................TAGGAACTTAATACCGTGCTCT......................................22810370.8812.252040.637.50151.638158.88
.......................................................................TAGGAACTTCATACCGTGCTC.......................................2187275.00296.003328.757.38622.753020.13
.......................................................................TAGGAACTTCATACCGTGCTCC......................................2283898.632.7531.500.63466.753397.00
.......................................................................TAGGAACTTAATACCGTGCTC.......................................2181361.751.25453.750.0013.38893.38
.......................................................................TAGGAACTTCATACCGTGCT........................................2081273.1332.00278.000.38141.25821.50
.......................................................................TAGGAACTTAATACCGTGCTCC......................................2281243.130.002.750.0017.501222.88
................................GCGAGGTATAGAGTTCCTACG..............................................................................2181027.88851.00168.008.500.000.38
.......................................................................TAGGAACTTCATACCGTGCTCG......................................228956.752.8813.380.25170.13770.13
.......................................................................TAGGAACTTCATACCGTGCTCTT.....................................238685.1395.00387.505.3846.88150.38
...............................AGCGAGGTATAGAGTTCCTAC...............................................................................218330.00248.2577.633.380.250.50
...............................AGCGAGGTATAGAGTTCCT.................................................................................198313.38157.25147.500.501.256.88
.......................................................................TAGGAACTTAATACCGTGCT........................................208295.880.0032.000.003.38260.50
.......................................................................TAGGAACTTAATACCGTGCTCG......................................228274.130.002.630.005.88265.63
.......................................................................TAGGAAATTCATACCGTGCTCT......................................228225.631.88214.751.001.386.63
...............................AGCGAGGTATAGAGTTCCTACT..............................................................................228200.50158.5020.5021.250.130.13
.......................................................................TAGGAACTTCATACCGCGCTCT......................................228166.254.13140.756.002.7512.63
...............................AGCGAGGGATAGAGTTCCTACG..............................................................................228139.7553.0076.0010.750.000.00
.......................................................................TAGGAACTTCATACCGTGCC........................................208129.880.132.130.0013.38114.25
...............................AGCGAGGTATAGAGTTCCTACGT.............................................................................238113.6376.8835.880.750.000.13
...............................AGCGAGGTATAGAGTTCCTA................................................................................208106.6370.7535.250.250.250.13
...............................AGCGAGGCATAGAGTTCCTACG..............................................................................22890.3853.1328.888.380.000.00
.......................................................................TAGGAACTTCATACCTTGCTCT......................................22888.004.2523.384.8811.1344.38
.......................................................................TAGGAACTTAATACCGTGCTCTT.....................................23880.630.2531.500.001.2547.63
.......................................................................TAGGAACTTCATACCGTGCCCT......................................22877.633.1337.001.257.1329.13
.......................................................................TAGGAGCTTCATACCGTGCTCT......................................22876.883.5057.131.503.3811.38
.......................................................................TAGGAACTTCATACCGAGCTCT......................................22876.005.3866.881.750.251.75
.......................................................................TAGGAACTTCATACCGTTCTCT......................................22875.502.0054.889.751.757.13
.......................................................................TAGCAACTTCATACCGTGCTCT......................................22872.881.3866.252.500.502.25
.......................................................................TAGGAACTTCATACCGGGCTCT......................................22869.133.6347.252.882.7512.63
.......................................................................TAGGAACGTCATACCGTGCTCT......................................22867.000.0065.380.380.251.00
...............................AGCGAGGTATAGAGCTCCTACG..............................................................................22865.3833.0024.388.000.000.00
......................................................................CTAGGAACTTCATACCGTGCTCT......................................23860.133.7549.131.880.385.00
.......................................................................TAGGAACTTCATACCGTGCTT.......................................21859.633.5027.250.005.7523.13
...............................AGCGAGGTATAGAGTTCCTACA..............................................................................22858.7543.8811.383.500.000.00
.......................................................................TAGGAACTTCATACCGTGC.........................................19858.130.134.500.005.6347.88
.......................................................................TGGGAACTTCATACCGTGCTCT......................................22857.751.6333.130.505.1317.38
.......................................................................TAGGAACTTCATACAGTGCTCT......................................22856.004.0041.250.501.638.63
.......................................................................CAGGAACTTCATACCGTGCTCT......................................22854.132.0039.880.632.758.88
.......................................................................TAGGAACTTCATACCGTGCG........................................20852.250.000.500.007.2544.50
.......................................................................TAGGGACTTCATACCGTGCTCT......................................22851.883.0034.503.002.508.88
.......................................................................TAGGAACTTCATAACGTGCTCT......................................22851.001.8843.630.380.384.75
.......................................................................TAGGAACTTCATACTGTGCTCT......................................22849.631.5031.751.131.8813.38
.......................................................................TAGGAACTTCATACCGTGCTCTTT....................................24849.0012.0027.750.255.133.88
.......................................................................TAGGAACTTCAGACCGTGCTCT......................................22846.000.5044.130.750.130.50
...............................AGCGAGGTATAGAGTTCCTACC..............................................................................22844.6323.6313.757.250.000.00
...............................AGCGAGGAATAGAGTTCCTACG..............................................................................22844.5020.1322.002.380.000.00
.......................................................................TAGGACCTTCATACCGTGCTCT......................................22844.380.2542.500.380.251.00
...............................AGCGAGGTATAGAGTTCCTCCG..............................................................................22843.757.7522.1313.880.000.00
.......................................................................TATGAACTTCATACCGTGCTCT......................................22842.381.5010.634.009.7516.50
.......................................................................TAGGAACTTCATACCGTGCTCTA.....................................23842.007.1326.750.252.635.25
.......................................................................TAGGAAATTCATACCGTGCTC.......................................21841.250.0040.000.000.131.13
.......................................................................TAGGAACTCCATACCGTGCTCT......................................22841.251.2529.751.131.757.38
...............................AGCGAGGTATAGAGATCCTACG..............................................................................22841.2524.3813.383.500.000.00
.......................................................................TAGGAACTTCATACCATGCTCT......................................22840.633.2520.131.502.5013.25
...............................AGCGAGGTATAGAGTTACTACG..............................................................................22839.8819.3817.003.500.000.00
.......................................................................TAGGAACTTCGTACCGTGCTCT......................................22839.252.3823.381.380.7511.38
.......................................................................TAGGAACTTCATACCGTCCTCT......................................22839.252.7530.501.380.753.88
.......................................................................TAGGAACTTCACACCGTGCTCT......................................22838.382.2522.751.001.3811.00
.......................................................................TAGGTACTTCATACCGTGCTCT......................................22837.750.5035.001.630.250.38
.......................................................................TAGGAACTTAATACCGTGCC........................................20837.130.000.500.000.7535.88
.......................................................................TAGGAACTTAATACCTTGCTCT......................................22836.880.003.000.001.6332.25
.......................................................................TAGGAACTTCATGCCGTGCTCT......................................22836.751.8814.130.883.0016.88
...............................AGCGAGGTATAGAGTTCATACG..............................................................................22835.8828.386.750.750.000.00
...............................AGCGAGGTATAGAGGTCCTACG..............................................................................22835.7510.1313.8811.750.000.00
.......................................................................TAGGAACTTGATACCGTGCTCT......................................22834.500.2530.750.130.253.13
...............................AGCGGGGTATAGAGTTCCTACG..............................................................................22834.3819.3810.884.000.130.00
...............................AGCGAGGTATAGAGTTCCCACG..............................................................................22833.1321.637.753.750.000.00
.......................................................................TAGGAACCTCATACCGTGCTCT......................................22833.132.0015.501.002.0012.63
...............................AGCGAGGTATAGAGTCCCTACG..............................................................................22833.0024.136.632.250.000.00
.......................................................................TAGGCACTTCATACCGTGCTCT......................................22832.632.7525.501.380.502.50
...............................AGCGCGGTATAGAGTTCCTACG..............................................................................22831.6317.0011.133.500.000.00
.......................................................................TAGGAACTTTATACCGTGCTCT......................................22831.251.7515.380.631.3812.13
.......................................................................TAGGAACTTCATACCGCGCTC.......................................21831.000.6328.750.000.251.38
...............................AGCGAGGTATATAGTTCCTACG..............................................................................22831.008.389.5013.130.000.00
...............................AGCGAGGTAGAGAGTTCCTACG..............................................................................22830.250.6328.381.250.000.00
.......................................................................TAGGAACTTCATACCCTGCTCT......................................22829.882.7518.881.251.006.00
.......................................................................TAGGAAATTAATACCGTGCTCT......................................22829.750.0027.000.000.002.75
.......................................................................TAGGAACTTCATACCGTACTCT......................................22829.384.8812.751.001.009.75
...............................AGCGAGGTATAGCGTTCCTACG..............................................................................22827.639.2514.254.130.000.00
...............................AGCGAGGTATAGAGTTCCGACG..............................................................................22827.632.2521.633.750.000.00
.......................................................................TAGGAACTTCATACCGTGCTCTC.....................................23827.252.008.750.637.758.13
...............................AGCGAGGTATAGAGTTCCTAAG..............................................................................22827.1315.889.252.000.000.00
.......................................................................TAGGAACTTCATACCxTGCTCT......................................21826.131.251.000.134.0019.75
.......................................................................TAGGAACTTCATACCGTGCTCTG.....................................23825.382.8817.880.130.753.75
.......................................................................TAAGAACTTCATACCGTGCTCT......................................22825.130.2519.751.500.633.00
...............................AGCGAGGTATAGGGTTCCTACG..............................................................................22824.5015.256.752.500.000.00
...............................AGCGAGGTATAGAGTTCCTATG..............................................................................22823.887.8814.251.750.000.00
...............................AGCGAGGTATAGAGTTCC..................................................................................18823.630.8812.500.131.139.00
.......................................................................TAGGAACTTCATACCGTGCGCT......................................22823.500.6319.130.630.502.63
.......................................................................TAGGAACTGCATACCGTGCTCT......................................22823.380.0022.750.250.130.25
.......................................................................TAGGAACTTCATACCGTGCTAT......................................22823.131.2514.880.750.635.63
.......................................................................TACGAACTTCATACCGTGCTCT......................................22823.131.008.752.003.388.00
...............................AGCGAGGTATACAGTTCCTACG..............................................................................22822.388.757.386.250.000.00
........................................................................AGGAACTTCATACCGTGCTCT......................................21822.131.387.380.132.5010.75
...............................AGCGAGGTGTAGAGTTCCTACG..............................................................................22821.7515.134.502.000.130.00
...............................AGCGAGGTATGGAGTTCCTACG..............................................................................22821.6313.886.381.380.000.00
.......................................................................TAGGAACTTAATACCGCGCTCT......................................22821.250.0016.000.000.135.13
.................................CGAGGTATAGAGTTCCTACG..............................................................................20821.2518.252.880.130.000.00
.......................................................................TAGGAACTTCATACCGTGATCT......................................22821.251.1311.750.880.756.75


droMoj3 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
5 scaffold_6680:20621809-20621940 - 79.07
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAA--ACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC-CAAGTGAATGCAAAAA---TCC
CCAAAGTATG--CTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCAATTTAAATACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAACACAACTCAAACAAAAACGAAAACGAGCG
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
...............................AGCGAGGTATAGAGTTCCTACG.................................................................................22834599.0015873.759049.136206.753469.38
......................................................................TAGGAACTTCATACCGTGCTCT..........................................22825035.383360.2510097.137101.004477.00
......................................................................TAGGAACTTCATACCGTGCTC...........................................2185700.75337.633195.632154.1313.38
......................................................................TAGGAACTTAATACCGTGCTCT..........................................2281789.7532.631090.38646.2520.50
................................GCGAGGTATAGAGTTCCTACG.................................................................................2181026.88593.63247.25170.6315.38
...............................AGCGAGGTATAGAGTTCCTAC..................................................................................218686.25312.00224.50145.254.50
......................................................................TAGGAACTTAATACCGTGCTC...........................................218619.753.00396.63219.880.25
...............................AGCGAGGTATAGAGTTCCT....................................................................................198457.50244.50132.0080.630.38
......................................................................TAGGAACTTCATACCGTGCTCTT.........................................238383.2545.75192.50132.7512.25
......................................................................TAGGAACTTCATACCGTGCT............................................208327.2525.25178.13121.632.25
...............................AGCGAGGTATAGAGTTCCTA...................................................................................208229.25106.7575.7546.500.25
...............................AGCGAGGGATAGAGTTCCTACG.................................................................................228228.1324.00123.7563.3817.00
...............................AGCGAGGTATAGAGTTCCTACGT................................................................................238221.6365.7588.8866.130.88
......................................................................TAGGAACTTCATACCGCGCTCT..........................................228153.502.0083.3853.3814.75
...............................AGCGAGGTATAGAGTTCCTACT.................................................................................228144.7564.0034.0042.384.38
......................................................................TAGGAGCTTCATACCGTGCTCT..........................................228106.752.2558.1341.385.00
...............................AGCGAGGTATAGAGTTCCTCCG.................................................................................22897.630.8819.0067.3810.38
...............................AGCGAGGCATAGAGTTCCTACG.................................................................................22889.1323.0041.5016.388.25
...............................AGCGAGGTATAGAGCTCCTACG.................................................................................22886.256.5035.3834.1310.25
...............................AGCGCGGTATAGAGTTCCTACG.................................................................................22884.004.7542.2528.508.50
......................................................................TAGGAACTTCATACCGTGCTCTC.........................................23883.0021.2534.3826.131.25
......................................................................TAGCAACTTCATACCGTGCTCT..........................................22870.251.6339.1327.132.38
...............................AGCGAGGTATAGAGTTCCTACA.................................................................................22865.2527.0018.8815.883.50
...............................AGCGGGGTATAGAGTTCCTACG.................................................................................22863.1317.2520.1317.508.25
......................................................................TAGGAAATTCATACCGTGCTCT..........................................22862.250.2529.0016.2516.75
......................................................................TAGGGACTTCATACCGTGCTCT..........................................22858.503.1326.7519.758.88
...............................AGCGAGGTATAGAGTTACTACG.................................................................................22858.255.1329.3815.388.38
.....................................................................CTAGGAACTTCATACCGTGCTCT..........................................23858.131.8825.6317.7512.88
......................................................................TAGGAACTTCCTACCGTGCTCT..........................................22857.500.259.1335.8812.25
...............................AGAGAGGTATAGAGTTCCTACG.................................................................................22856.003.2528.2513.1311.38
......................................................................TAGGAACGTCATACCGTGCTCT..........................................22854.630.1334.1318.501.88
...............................AGCGAGGTATAGAGGTCCTACG.................................................................................22851.752.6316.6318.8813.63
...............................AGCGAGGTATAGCGTTCCTACG.................................................................................22851.133.0018.0022.257.88
......................................................................TAGGCACTTCATACCGTGCTCT..........................................22850.502.7517.3822.637.75
...............................AGCGAGGTATAGAGTTCCTACGC................................................................................23849.8824.6313.5010.880.88
......................................................................TAGGAACTTCATACCGTTCTCT..........................................22847.753.1310.8830.133.63
......................................................................TAGGTACTTCATACCGTGCTCT..........................................22845.000.6315.3818.7510.25
...............................AGCGAGGTATAGAGTTCCTATG.................................................................................22844.885.7521.1315.003.00
......................................................................TAGGAACTTCATACCGAGCTCT..........................................22844.500.7529.759.754.25
......................................................................TAGGAACTTCATACCGCGCTC...........................................21843.500.1326.6316.630.13
...............................AGCGAGGTATAGAGTTCCTACGTT...............................................................................24843.2521.7511.3810.000.13
...............................AGCGAGGTATAGAGTTCCTAAG.................................................................................22843.004.8815.1310.7512.25
......................................................................TAGGAACTTCATAACGTGCTCT..........................................22842.131.0013.1321.756.25
......................................................................TAGGAACTTCATACAGTGCTCT..........................................22841.251.0021.009.889.38
...............................GGCGAGGTATAGAGTTCCTACG.................................................................................22841.1316.3812.508.004.25
...............................AGCGAGGTATAGAGTTCCTACC.................................................................................22840.759.5016.5012.132.63
......................................................................TAGGAACTTCGTACCGTGCTCT..........................................22840.631.8817.0014.387.38
...............................AGCGAGGTATATAGTTCCTACG.................................................................................22840.2514.2514.889.381.75
...............................AGCGAGGTATAGTGTTCCTACG.................................................................................22840.130.2520.7513.755.38
...............................AGCGAGGTATAGAGTTCCGACG.................................................................................22840.000.5018.0012.139.38
...............................AGCGAGGAATAGAGTTCCTACG.................................................................................22839.8812.1322.004.001.75
...............................AGCGAGGTATAGAGTTCATACG.................................................................................22837.5010.8814.138.004.50
......................................................................TAGGAACTTAATACCGTGCTCTT.........................................23837.130.3826.2510.500.00
......................................................................TAGGAACTTCATACCGTGCTCC..........................................22836.134.2515.8812.383.63
......................................................................TAGGAACTTCATACCGTGCTCTA.........................................23836.003.6318.8812.630.88
...............................AGCGAGGTATAGAGTCCCTACG.................................................................................22835.257.6316.637.883.13
...............................AGCGAGGTATAGAGTTCCTC...................................................................................20834.5011.6314.888.000.00
......................................................................TAGGAACTTCATACCATGCTCT..........................................22833.381.5010.8815.135.88
...............................AGCGAGGTATAGAGATCCTACG.................................................................................22833.381.1316.6310.754.88
...............................AGCGAGGTATAGAGTTCCTACGA................................................................................23832.6311.5010.7510.380.00
...............................AGCGAGGTGTAGAGTTCCTACG.................................................................................22832.387.3810.3810.254.38
......................................................................TAGGAACTTCAGACCGTGCTCT..........................................22832.380.1319.139.753.38
......................................................................TAGGAACTTCATACCGTGCTCTG.........................................23831.882.0017.0012.500.38
......................................................................TGGGAACTTCATACCGTGCTCT..........................................22831.633.0012.8811.254.50
...............................AGCGAGGTATGGAGTTCCTACG.................................................................................22831.386.5013.007.504.38
......................................................................TAAGAACTTCATACCGTGCTCT..........................................22831.131.139.8815.504.63
...............................AGCGAGGTATAGAGTTCCCACG.................................................................................22830.755.5012.638.134.50
...............................AGCGAGGTATAGGGTTCCTACG.................................................................................22830.386.6312.508.382.88
...............................AGCGAGGTATAGAGTTCCTACGTC...............................................................................24830.0020.385.634.000.00
......................................................................TAGGAACTTCATACCGTGCCCT..........................................22829.751.2513.7510.384.38
......................................................................TAGGAACTTCATACTGTGCTCT..........................................22829.752.8814.507.634.75
......................................................................TAGGAACTTCATACCGGGCTCT..........................................22829.630.3814.5010.134.63
......................................................................TAGGAACTTAATACCGTGCT............................................20829.130.1319.639.380.00
...............................AGCGAGGTACAGAGTTCCTACG.................................................................................22828.636.6312.756.632.63
......................................................................TAGGAACTTCACACCGTGCTCT..........................................22828.631.0013.1310.883.63
......................................................................TAGGAACTTCATACCGTGCTT...........................................21828.381.8814.6311.880.00
......................................................................TAGGAACTTCATACCCTGCTCT..........................................22828.131.2512.6313.131.13
...............................AGCGAGGTATCGAGTTCCTACG.................................................................................22827.751.387.1314.884.38
......................................................................CAGGAACTTCATACCGTGCTCT..........................................22827.381.5013.758.134.00
...............................AGCGAGGTATACAGTTCCTACG.................................................................................22827.253.3811.389.503.00
......................................................................TAGGAACTTCATACCTTGCTCT..........................................22827.256.259.639.631.75
......................................................................TAGGAACCTCATACCGTGCTCT..........................................22827.132.0011.889.134.13
...............................AGCGTGGTATAGAGTTCCTACG.................................................................................22827.002.7511.887.504.88
......................................................................TAGGAACTTCATACCGTGATCT..........................................22827.001.2510.889.005.88
......................................................................TAGGAACTTCATACCGTGCTAT..........................................22825.001.009.007.507.50
......................................................................TAGGAACTTCATACCGTCCTCT..........................................22824.881.6313.754.505.00
...............................AGCGAGGTATAGAGTTCTTACG.................................................................................22824.633.8813.135.002.63
...............................ATCGAGGTATAGAGTTCCTACG.................................................................................22823.5020.132.131.250.00
...............................AGCGAGGTATAGAGTTCCTGCG.................................................................................22823.503.759.634.885.25
......................................................................TCGGAACTTCATACCGTGCTCT..........................................22823.380.635.5015.002.25
...............................AGCAAGGTATAGAGTTCCTACG.................................................................................22823.008.385.006.003.63
.................................CGAGGTATAGAGTTCCTACG.................................................................................20822.6315.883.383.250.13
......................................................................TAGGAACTCCATACCGTGCTCT..........................................22821.501.2510.756.003.50
......................................................................TAGGAACTTCATATCGTGCTCT..........................................22821.381.759.385.884.38
......................................................................TAGGAATTTCATACCGTGCTCT..........................................22819.381.1311.504.002.75
......................................................................TAGCAACTTCATACCGTGCTC...........................................21819.380.1311.637.630.00
...............................AGCGAGGTATAGAGTTTCTACG.................................................................................22819.255.136.254.253.63
...............................AGCGATGTATAGAGTTCCTACG.................................................................................22819.1313.002.632.381.13
......................................................................TAGGAACTTCATCCCGTGCTCT..........................................22819.130.387.259.382.13
...............................AGTGAGGTATAGAGTTCCTACG.................................................................................22819.007.635.753.632.00
......................................................................TAGGAACTTCATACCGTACTCT..........................................22818.751.506.388.002.88
7 scaffold_6680:20678196-20678322 - 67.88
CCAAGATATTTTTTACCTGGTTT--TTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATT--ATAA-ACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
TAAAGATA------ACGAAGTCTATATACCATCAGCGAGGTATAGAGTTCCTACGTGCAAATTGCAATAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCAACAAAACGAATAAAGTGAACA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.................................AGCGAGGTATAGAGTTCCTACG..............................................................................22834599.0015873.759049.136206.753469.38
.........................................................................TAGGAACTTCATACCGTGCTCT......................................22825035.383360.2510097.137101.004477.00
.........................................................................TAGGAACTTCATACCGTGCTC.......................................2185700.75337.633195.632154.1313.38
.........................................................................TAGGAACTTAATACCGTGCTCT......................................2281789.7532.631090.38646.2520.50
..................................GCGAGGTATAGAGTTCCTACG..............................................................................2181026.88593.63247.25170.6315.38
.................................AGCGAGGTATAGAGTTCCTAC...............................................................................218686.25312.00224.50145.254.50
.........................................................................TAGGAACTTAATACCGTGCTC.......................................218619.753.00396.63219.880.25
.................................AGCGAGGTATAGAGTTCCT.................................................................................198457.50244.50132.0080.630.38
.........................................................................TAGGAACTTCATACCGTGCTCTT.....................................238383.2545.75192.50132.7512.25
.........................................................................TAGGAACTTCATACCGTGCT........................................208327.2525.25178.13121.632.25
.................................AGCGAGGTATAGAGTTCCTA................................................................................208229.25106.7575.7546.500.25
.................................AGCGAGGGATAGAGTTCCTACG..............................................................................228228.1324.00123.7563.3817.00
.................................AGCGAGGTATAGAGTTCCTACGT.............................................................................238221.6365.7588.8866.130.88
.........................................................................TAGGAACTTCATACCGCGCTCT......................................228153.502.0083.3853.3814.75
.................................AGCGAGGTATAGAGTTCCTACT..............................................................................228144.7564.0034.0042.384.38
.........................................................................TAGGAGCTTCATACCGTGCTCT......................................228106.752.2558.1341.385.00
.................................AGCGAGGTATAGAGTTCCTCCG..............................................................................22897.630.8819.0067.3810.38
.................................AGCGAGGCATAGAGTTCCTACG..............................................................................22889.1323.0041.5016.388.25
.................................AGCGAGGTATAGAGCTCCTACG..............................................................................22886.256.5035.3834.1310.25
.................................AGCGCGGTATAGAGTTCCTACG..............................................................................22884.004.7542.2528.508.50
.........................................................................TAGGAACTTCATACCGTGCTCTC.....................................23883.0021.2534.3826.131.25
.........................................................................TAGCAACTTCATACCGTGCTCT......................................22870.251.6339.1327.132.38
.................................AGCGAGGTATAGAGTTCCTACA..............................................................................22865.2527.0018.8815.883.50
.................................AGCGGGGTATAGAGTTCCTACG..............................................................................22863.1317.2520.1317.508.25
.........................................................................TAGGAAATTCATACCGTGCTCT......................................22862.250.2529.0016.2516.75
.........................................................................TAGGGACTTCATACCGTGCTCT......................................22858.503.1326.7519.758.88
.................................AGCGAGGTATAGAGTTACTACG..............................................................................22858.255.1329.3815.388.38
........................................................................CTAGGAACTTCATACCGTGCTCT......................................23858.131.8825.6317.7512.88
.........................................................................TAGGAACTTCCTACCGTGCTCT......................................22857.500.259.1335.8812.25
.................................AGAGAGGTATAGAGTTCCTACG..............................................................................22856.003.2528.2513.1311.38
.........................................................................TAGGAACGTCATACCGTGCTCT......................................22854.630.1334.1318.501.88
.................................AGCGAGGTATAGAGGTCCTACG..............................................................................22851.752.6316.6318.8813.63
.................................AGCGAGGTATAGCGTTCCTACG..............................................................................22851.133.0018.0022.257.88
.........................................................................TAGGCACTTCATACCGTGCTCT......................................22850.502.7517.3822.637.75
.................................AGCGAGGTATAGAGTTCCTACGC.............................................................................23849.8824.6313.5010.880.88
.........................................................................TAGGAACTTCATACCGTTCTCT......................................22847.753.1310.8830.133.63
.........................................................................TAGGTACTTCATACCGTGCTCT......................................22845.000.6315.3818.7510.25
.................................AGCGAGGTATAGAGTTCCTATG..............................................................................22844.885.7521.1315.003.00
.........................................................................TAGGAACTTCATACCGAGCTCT......................................22844.500.7529.759.754.25
.........................................................................TAGGAACTTCATACCGCGCTC.......................................21843.500.1326.6316.630.13
.................................AGCGAGGTATAGAGTTCCTACGTT............................................................................24843.2521.7511.3810.000.13
.................................AGCGAGGTATAGAGTTCCTAAG..............................................................................22843.004.8815.1310.7512.25
.........................................................................TAGGAACTTCATAACGTGCTCT......................................22842.131.0013.1321.756.25
.........................................................................TAGGAACTTCATACAGTGCTCT......................................22841.251.0021.009.889.38
.................................GGCGAGGTATAGAGTTCCTACG..............................................................................22841.1316.3812.508.004.25
.................................AGCGAGGTATAGAGTTCCTACC..............................................................................22840.759.5016.5012.132.63
.........................................................................TAGGAACTTCGTACCGTGCTCT......................................22840.631.8817.0014.387.38
.................................AGCGAGGTATATAGTTCCTACG..............................................................................22840.2514.2514.889.381.75
.................................AGCGAGGTATAGTGTTCCTACG..............................................................................22840.130.2520.7513.755.38
.................................AGCGAGGTATAGAGTTCCGACG..............................................................................22840.000.5018.0012.139.38
.................................AGCGAGGAATAGAGTTCCTACG..............................................................................22839.8812.1322.004.001.75
.................................AGCGAGGTATAGAGTTCATACG..............................................................................22837.5010.8814.138.004.50
.........................................................................TAGGAACTTAATACCGTGCTCTT.....................................23837.130.3826.2510.500.00
.........................................................................TAGGAACTTCATACCGTGCTCC......................................22836.134.2515.8812.383.63
.........................................................................TAGGAACTTCATACCGTGCTCTA.....................................23836.003.6318.8812.630.88
.................................AGCGAGGTATAGAGTCCCTACG..............................................................................22835.257.6316.637.883.13
.................................AGCGAGGTATAGAGTTCCTC................................................................................20834.5011.6314.888.000.00
.........................................................................TAGGAACTTCATACCATGCTCT......................................22833.381.5010.8815.135.88
.................................AGCGAGGTATAGAGATCCTACG..............................................................................22833.381.1316.6310.754.88
.................................AGCGAGGTATAGAGTTCCTACGA.............................................................................23832.6311.5010.7510.380.00
.................................AGCGAGGTGTAGAGTTCCTACG..............................................................................22832.387.3810.3810.254.38
.........................................................................TAGGAACTTCAGACCGTGCTCT......................................22832.380.1319.139.753.38
.........................................................................TAGGAACTTCATACCGTGCTCTG.....................................23831.882.0017.0012.500.38
.........................................................................TGGGAACTTCATACCGTGCTCT......................................22831.633.0012.8811.254.50
.................................AGCGAGGTATGGAGTTCCTACG..............................................................................22831.386.5013.007.504.38
.........................................................................TAAGAACTTCATACCGTGCTCT......................................22831.131.139.8815.504.63
.................................AGCGAGGTATAGAGTTCCCACG..............................................................................22830.755.5012.638.134.50
.................................AGCGAGGTATAGGGTTCCTACG..............................................................................22830.386.6312.508.382.88
.................................AGCGAGGTATAGAGTTCCTACGTC............................................................................24830.0020.385.634.000.00
.........................................................................TAGGAACTTCATACTGTGCTCT......................................22829.752.8814.507.634.75
.........................................................................TAGGAACTTCATACCGTGCCCT......................................22829.751.2513.7510.384.38
.........................................................................TAGGAACTTCATACCGGGCTCT......................................22829.630.3814.5010.134.63
.........................................................................TAGGAACTTAATACCGTGCT........................................20829.130.1319.639.380.00
.................................AGCGAGGTACAGAGTTCCTACG..............................................................................22828.636.6312.756.632.63
.........................................................................TAGGAACTTCACACCGTGCTCT......................................22828.631.0013.1310.883.63
.........................................................................TAGGAACTTCATACCGTGCTT.......................................21828.381.8814.6311.880.00
.........................................................................TAGGAACTTCATACCCTGCTCT......................................22828.131.2512.6313.131.13
.................................AGCGAGGTATCGAGTTCCTACG..............................................................................22827.751.387.1314.884.38
.........................................................................CAGGAACTTCATACCGTGCTCT......................................22827.381.5013.758.134.00
.........................................................................TAGGAACTTCATACCTTGCTCT......................................22827.256.259.639.631.75
.................................AGCGAGGTATACAGTTCCTACG..............................................................................22827.253.3811.389.503.00
.........................................................................TAGGAACCTCATACCGTGCTCT......................................22827.132.0011.889.134.13
.........................................................................TAGGAACTTCATACCGTGATCT......................................22827.001.2510.889.005.88
.................................AGCGTGGTATAGAGTTCCTACG..............................................................................22827.002.7511.887.504.88
.........................................................................TAGGAACTTCATACCGTGCTAT......................................22825.001.009.007.507.50
.........................................................................TAGGAACTTCATACCGTCCTCT......................................22824.881.6313.754.505.00
.................................AGCGAGGTATAGAGTTCTTACG..............................................................................22824.633.8813.135.002.63
.................................AGCGAGGTATAGAGTTCCTGCG..............................................................................22823.503.759.634.885.25
.................................ATCGAGGTATAGAGTTCCTACG..............................................................................22823.5020.132.131.250.00
.........................................................................TCGGAACTTCATACCGTGCTCT......................................22823.380.635.5015.002.25
.................................AGCAAGGTATAGAGTTCCTACG..............................................................................22823.008.385.006.003.63
...................................CGAGGTATAGAGTTCCTACG..............................................................................20822.6315.883.383.250.13
.........................................................................TAGGAACTCCATACCGTGCTCT......................................22821.501.2510.756.003.50
.........................................................................TAGGAACTTCATATCGTGCTCT......................................22821.381.759.385.884.38
.........................................................................TAGGAATTTCATACCGTGCTCT......................................22819.381.1311.504.002.75
.........................................................................TAGCAACTTCATACCGTGCTC.......................................21819.380.1311.637.630.00
.................................AGCGAGGTATAGAGTTTCTACG..............................................................................22819.255.136.254.253.63
.................................AGCGATGTATAGAGTTCCTACG..............................................................................22819.1313.002.632.381.13
.........................................................................TAGGAACTTCATCCCGTGCTCT......................................22819.130.387.259.382.13
.................................AGTGAGGTATAGAGTTCCTACG..............................................................................22819.007.635.753.632.00
.........................................................................TAGGAACTTCATACCGTACTCT......................................22818.751.506.388.002.88
1 scaffold_6496:9323302-9323407 + 37.89
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAG---GTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CCATAAGACCTCTAAGCTCAATTATGGCATGAACGGACAGGCAGACA------AAGGCAG-------------------GCGTAGAGCGAGAGAGAAAGAGAGAGAGAGAGCCATAGAGTGAGTGAAATGC
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
............................................................................................GAGAAAGAGAGAGAGAGA.....................18480.040.020.000.000.02
..................................................................................TAGAGCGAGGGAGCAAGA...............................1850.200.000.000.200.00
.........................................................................................AGAGAGAAAGAGAGAGAGAG......................20310.030.030.000.000.00
............................ATGCACGGACAGCCAGAC.....................................................................................1820.500.000.000.000.50
........................................................................................GACAGAGAAAGAGAGAGAGAGA.....................22490.020.000.020.000.00
........................................................................................GAGAGACAAAGAGAGAGAGAGA.....................22410.020.020.000.000.00
..............................................................................................GAAAGAGGGAGAGAGAGC...................1880.130.130.000.000.00
..................................................................................AAGAGCGAGAGAGAATGAGA.............................20120.080.080.000.000.00
............................................................................................GAGAAAGAGAGAGAGAGAG....................19420.020.020.000.000.00


droGri2 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
5 scaffold_15110:12521926-12522042 - 73.57
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAA--ACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCC
CAAAAATATG--CTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTAAATTTAAATACTCATAGGAACTTCATACCGTGCTCTTGGAAGACCAAAACACAACAAAGAA-----------AC
SizeHit CountTotal NormV109
Male body
...............................AGCGAGGTATAGAGTTCCTACG.............................................................................2286110.136110.13
......................................................................TAGGAACTTCATACCGTGCTCT......................................2281516.881516.88
......................................................................TAGGAACTTCATACCGTGCTC.......................................21895.8895.88
...............................AGCGAGGTATAGAGTTCATACG.............................................................................22862.6362.63
...............................AGCGAGGTATAGAGTTCCTAC..............................................................................21856.3856.38
...............................AGCGAGGTATAGAGTTCTTACG.............................................................................22839.5039.50
...............................AGCGAGGTATAGAGTTCGTACG.............................................................................22839.2539.25
...............................AGCGAGGTATAGAGTTCCT................................................................................19829.5029.50
......................................................................TAGGAACTTCATACCGTGCTCTT.....................................23822.1322.13
...............................AGCGAGGTCTAGAGTTCCTACG.............................................................................22821.2521.25
...............................AGCGAGGCATAGAGTTCCTACG.............................................................................22820.8820.88
................................GCGAGGTATAGAGTTCCTACG.............................................................................21817.5017.50
...............................AGCGAGGTATAGAGTTCCTA...............................................................................20817.2517.25
...............................AGCGAGGTATAGAGTTCCTACT.............................................................................22817.2517.25
...............................AGAGAGGTATAGAGTTCCTACG.............................................................................22817.2517.25
...............................AGCGAGGTTTAGAGTTCCTACG.............................................................................22816.7516.75
......................................................................TAGGAACTTCATACCGTCCTCT......................................22816.2516.25
......................................................................TAGGAACTTCATACCGTGCT........................................20816.0016.00
...............................AGCGAGATATAGAGTTCCTACG.............................................................................22815.7515.75
...............................AGTGAGGTATAGAGTTCCTACG.............................................................................22815.1315.13
......................................................................TAGGAACTTCATACCGTACTCT......................................22815.1315.13
...............................AGCGAGCTATAGAGTTCCTACG.............................................................................22814.5014.50
...............................AGCGAGGTATAGAGTTCCTACC.............................................................................22814.1314.13
...............................AGCGAGGTATAGAGTTCCTACGT............................................................................23814.0014.00
...............................AGCGCGGTATAGAGTTCCTACG.............................................................................22813.1313.13
...............................AGCGAAGTATAGAGTTCCTACG.............................................................................22813.0013.00
...............................AGCGACGTATAGAGTTCCTACG.............................................................................22812.7512.75
...............................AGCGAGGTGTAGAGTTCCTACG.............................................................................22811.2511.25
......................................................................TAGGAACTTCATACCGTTCTCT......................................2289.009.00
...............................AGCGAGGTATAGAGTTCCTACA.............................................................................2289.009.00
...............................AGCGAGGTATAGAGTCCCTACG.............................................................................2288.138.13
...............................AGCGAGGAATAGAGTTCCTACG.............................................................................2288.008.00
...............................AGGGAGGTATAGAGTTCCTACG.............................................................................2287.387.38
...............................AGCGAGGTATAGAGTTCCTAAG.............................................................................2287.007.00
...............................AGCGATGTATAGAGTTCCTACG.............................................................................2286.756.75
...............................AGCGAGGTATACAGTTCCTACG.............................................................................2286.256.25
...............................AGCGAGGTATAGCGTTCCTACG.............................................................................2286.136.13
......................................................................TAGGAACTCCATACCGTGCTCT......................................2285.755.75
...............................AGCGAGGTACAGAGTTCCTACG.............................................................................2285.755.75
...............................AGCGAGGTATAGAGCTCCTACG.............................................................................2285.635.63
...............................AGCGAGGTATAGAGTTCCCACG.............................................................................2285.635.63
...............................AGCGAGGGATAGAGTTCCTACG.............................................................................2285.505.50
......................................................................TAGGAAATTCATACCGTGCTCT......................................2285.505.50
......................................................................TAGGAACTTAATACCGTGCTCT......................................2285.255.25
.................................CGAGGTATAGAGTTCCTACG.............................................................................2085.255.25
...............................AGCGAGGTATAGAGTTCCTCCG.............................................................................2285.135.13
...............................AGCGAGTTATAGAGTTCCTACG.............................................................................2285.135.13
...............................ATCGAGGTATAGAGTTCCTACG.............................................................................2285.135.13
......................................................................TAAGAACTTCATACCGTGCTCT......................................2284.754.75
......................................................................TAGGCACTTCATACCGTGCTCT......................................2284.754.75
......................................................................TAGGACCTTCATACCGTGCTCT......................................2284.754.75
...............................AGCGGGGTATAGAGTTCCTACG.............................................................................2284.634.63
...............................ACCGAGGTATAGAGTTCCTACG.............................................................................2284.634.63
...............................AGCCAGGTATAGAGTTCCTACG.............................................................................2284.134.13
...............................AGCGAGGTATAGAGTTACTACG.............................................................................2284.134.13
...............................AGCGAGGTATAAAGTTCCTACG.............................................................................2283.883.88
......................................................................TAGGAATTTCATACCGTGCTCT......................................2283.753.75
...............................AGCGAGGTATAGACTTCCTACG.............................................................................2283.753.75
......................................................................TAGGAACTTCATACCGTGCTCC......................................2283.633.63
...............................AGCTAGGTATAGAGTTCCTACG.............................................................................2283.503.50
...............................AGCGAGGTATAGAATTCCTACG.............................................................................2283.383.38
......................................................................TACGAACTTCATACCGTGCTCT......................................2283.383.38
......................................................................TATGAACTTCATACCGTGCTCT......................................2283.383.38
...............................AGCGAGGTATCGAGTTCCTACG.............................................................................2283.253.25
...............................AGCGAGGTATATAGTTCCTACG.............................................................................2283.253.25
...............................AGCGAGGTATAGAGTTCCTATG.............................................................................2283.003.00
......................................................................TAGGAGCTTCATACCGTGCTCT......................................2283.003.00
...............................GGCGAGGTATAGAGTTCCTACG.............................................................................2283.003.00
......................................................................TAGGAACTACATACCGTGCTCT......................................2283.003.00
......................................................................TAGGAACTTCATACCTTGCTCT......................................2282.752.75
...............................AGCGAGGTATGGAGTTCCTACG.............................................................................2282.752.75
...............................AGCAAGGTATAGAGTTCCTACG.............................................................................2282.632.63
...............................AACGAGGTATAGAGTTCCTACG.............................................................................2282.632.63
......................................................................TAGGAACTTCATACCGTGCCCT......................................2282.382.38
...............................AGCGAGGTATAGGGTTCCTACG.............................................................................2282.252.25
...............................AGCGAGGTATAGAGTTTCTACG.............................................................................2282.252.25
...............................AGCGAGGTATAGATTTCCTACG.............................................................................2282.252.25
......................................................................TAGGAACTGCATACCGTGCTCT......................................2282.252.25
.....................................................................CTAGGAACTTCATACCGTGCTCT......................................2382.132.13
......................................................................TAGGAACTTCATACCGCGCTCT......................................2282.132.13
...............................AGCGAGGTATAGAGTTCCTACGTT...........................................................................2482.002.00
......................................................................TAGGAACTTCATACAGTGCTCT......................................2282.002.00
...............................AGCGAGGxxTAGAGTTCCTACG.............................................................................2081.881.88
......................................................................TAGGAACTTCATACCCTGCTCT......................................2281.881.88
...............................AGCGTGGTATAGAGTTCCTACG.............................................................................2281.751.75
...............................CGCGAGGTATAGAGTTCCTACG.............................................................................2281.751.75
......................................................................TAGGAACTTCATACCGTGCTAT......................................2281.751.75
...............................AGCGAGGTATAGAGTTCCAACG.............................................................................2281.751.75
......................................................................TAGGATCTTCATACCGTGCTCT......................................2281.631.63
......................................................................TAGGAACCTCATACCGTGCTCT......................................2281.631.63
...............................AGCGAGGTATAGAGTTCCTACGA............................................................................2381.631.63
...............................AGCGAGGTATAGAGTTCCTGCG.............................................................................2281.631.63
......................................................................TAGGAACTTCACACCGTGCTCT......................................2281.631.63
......................................................................TCGGAACTTCATACCGTGCTCT......................................2281.501.50
......................................................................TAGGAAGTTCATACCGTGCTCT......................................2281.501.50
......................................................................TAGGGACTTCATACCGTGCTCT......................................2281.381.38
...............................AGCGAxGTATAGAGTTCCTACG.............................................................................2181.381.38
......................................................................TAGGAACTTCCTACCGTGCTCT......................................2281.251.25
......................................................................TAGGAACTTCATACCGTCCTC.......................................2181.251.25
......................................................................TAGGAACTTCATACCGTGCTCTTT....................................2481.251.25
......................................................................TAGGAACTTCATACCGTGTTCT......................................2281.251.25
6 scaffold_15110:12572304-12572421 - 55.16
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAA--------ACTCGTAGGAACTTCATACCGTGCTCTTGGAAGAC-------CAA--------AAAACAACCAAGTGAATGCAAAAATCC
TCTA------------------TTTACCATTAGCGAGGTATAGAGTTCCTACGTGCA-----AATTGCAATAATCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCAGCATTGATCAAAACAATTAAGTGACT----------
SizeHit CountTotal NormV109
Male body
...............................AGCGAGGTATAGAGTTCCTACG..................................................................................................2286110.136110.13
............................................................................TAGGAACTTCATACCGTGCTCT.....................................................2281516.881516.88
............................................................................TAGGAACTTCATACCGTGCTC......................................................21895.8895.88
...............................AGCGAGGTATAGAGTTCATACG..................................................................................................22862.6362.63
...............................AGCGAGGTATAGAGTTCCTAC...................................................................................................21856.3856.38
...............................AGCGAGGTATAGAGTTCTTACG..................................................................................................22839.5039.50
...............................AGCGAGGTATAGAGTTCGTACG..................................................................................................22839.2539.25
...............................AGCGAGGTATAGAGTTCCT.....................................................................................................19829.5029.50
............................................................................TAGGAACTTCATACCGTGCTCTT....................................................23822.1322.13
...............................AGCGAGGTCTAGAGTTCCTACG..................................................................................................22821.2521.25
...............................AGCGAGGCATAGAGTTCCTACG..................................................................................................22820.8820.88
................................GCGAGGTATAGAGTTCCTACG..................................................................................................21817.5017.50
...............................AGAGAGGTATAGAGTTCCTACG..................................................................................................22817.2517.25
...............................AGCGAGGTATAGAGTTCCTACT..................................................................................................22817.2517.25
...............................AGCGAGGTATAGAGTTCCTA....................................................................................................20817.2517.25
...............................AGCGAGGTTTAGAGTTCCTACG..................................................................................................22816.7516.75
............................................................................TAGGAACTTCATACCGTCCTCT.....................................................22816.2516.25
............................................................................TAGGAACTTCATACCGTGCT.......................................................20816.0016.00
...............................AGCGAGATATAGAGTTCCTACG..................................................................................................22815.7515.75
............................................................................TAGGAACTTCATACCGTACTCT.....................................................22815.1315.13
...............................AGTGAGGTATAGAGTTCCTACG..................................................................................................22815.1315.13
...............................AGCGAGCTATAGAGTTCCTACG..................................................................................................22814.5014.50
...............................AGCGAGGTATAGAGTTCCTACC..................................................................................................22814.1314.13
...............................AGCGAGGTATAGAGTTCCTACGT.................................................................................................23814.0014.00
...............................AGCGCGGTATAGAGTTCCTACG..................................................................................................22813.1313.13
...............................AGCGAAGTATAGAGTTCCTACG..................................................................................................22813.0013.00
...............................AGCGACGTATAGAGTTCCTACG..................................................................................................22812.7512.75
...............................AGCGAGGTGTAGAGTTCCTACG..................................................................................................22811.2511.25
............................................................................TAGGAACTTCATACCGTTCTCT.....................................................2289.009.00
...............................AGCGAGGTATAGAGTTCCTACA..................................................................................................2289.009.00
...............................AGCGAGGTATAGAGTCCCTACG..................................................................................................2288.138.13
...............................AGCGAGGAATAGAGTTCCTACG..................................................................................................2288.008.00
...............................AGGGAGGTATAGAGTTCCTACG..................................................................................................2287.387.38
...............................AGCGAGGTATAGAGTTCCTAAG..................................................................................................2287.007.00
...............................AGCGATGTATAGAGTTCCTACG..................................................................................................2286.756.75
...............................AGCGAGGTATACAGTTCCTACG..................................................................................................2286.256.25
...............................AGCGAGGTATAGCGTTCCTACG..................................................................................................2286.136.13
...............................AGCGAGGTACAGAGTTCCTACG..................................................................................................2285.755.75
............................................................................TAGGAACTCCATACCGTGCTCT.....................................................2285.755.75
...............................AGCGAGGTATAGAGCTCCTACG..................................................................................................2285.635.63
...............................AGCGAGGTATAGAGTTCCCACG..................................................................................................2285.635.63
............................................................................TAGGAAATTCATACCGTGCTCT.....................................................2285.505.50
...............................AGCGAGGGATAGAGTTCCTACG..................................................................................................2285.505.50
............................................................................TAGGAACTTAATACCGTGCTCT.....................................................2285.255.25
.................................CGAGGTATAGAGTTCCTACG..................................................................................................2085.255.25
...............................ATCGAGGTATAGAGTTCCTACG..................................................................................................2285.135.13
...............................AGCGAGTTATAGAGTTCCTACG..................................................................................................2285.135.13
...............................AGCGAGGTATAGAGTTCCTCCG..................................................................................................2285.135.13
............................................................................TAGGCACTTCATACCGTGCTCT.....................................................2284.754.75
............................................................................TAAGAACTTCATACCGTGCTCT.....................................................2284.754.75
............................................................................TAGGACCTTCATACCGTGCTCT.....................................................2284.754.75
...............................AGCGGGGTATAGAGTTCCTACG..................................................................................................2284.634.63
...............................ACCGAGGTATAGAGTTCCTACG..................................................................................................2284.634.63
...............................AGCCAGGTATAGAGTTCCTACG..................................................................................................2284.134.13
...............................AGCGAGGTATAGAGTTACTACG..................................................................................................2284.134.13
...............................AGCGAGGTATAAAGTTCCTACG..................................................................................................2283.883.88
............................................................................TAGGAATTTCATACCGTGCTCT.....................................................2283.753.75
...............................AGCGAGGTATAGACTTCCTACG..................................................................................................2283.753.75
............................................................................TAGGAACTTCATACCGTGCTCC.....................................................2283.633.63
...............................AGCTAGGTATAGAGTTCCTACG..................................................................................................2283.503.50
...............................AGCGAGGTATAGAATTCCTACG..................................................................................................2283.383.38
............................................................................TATGAACTTCATACCGTGCTCT.....................................................2283.383.38
............................................................................TACGAACTTCATACCGTGCTCT.....................................................2283.383.38
...............................AGCGAGGTATATAGTTCCTACG..................................................................................................2283.253.25
...............................AGCGAGGTATCGAGTTCCTACG..................................................................................................2283.253.25
............................................................................TAGGAACTACATACCGTGCTCT.....................................................2283.003.00
............................................................................TAGGAGCTTCATACCGTGCTCT.....................................................2283.003.00
...............................GGCGAGGTATAGAGTTCCTACG..................................................................................................2283.003.00
...............................AGCGAGGTATAGAGTTCCTATG..................................................................................................2283.003.00
...............................AGCGAGGTATGGAGTTCCTACG..................................................................................................2282.752.75
............................................................................TAGGAACTTCATACCTTGCTCT.....................................................2282.752.75
...............................AACGAGGTATAGAGTTCCTACG..................................................................................................2282.632.63
...............................AGCAAGGTATAGAGTTCCTACG..................................................................................................2282.632.63
............................................................................TAGGAACTTCATACCGTGCCCT.....................................................2282.382.38
...............................AGCGAGGTATAGGGTTCCTACG..................................................................................................2282.252.25
...............................AGCGAGGTATAGAGTTTCTACG..................................................................................................2282.252.25
............................................................................TAGGAACTGCATACCGTGCTCT.....................................................2282.252.25
...............................AGCGAGGTATAGATTTCCTACG..................................................................................................2282.252.25
...........................................................................CTAGGAACTTCATACCGTGCTCT.....................................................2382.132.13
............................................................................TAGGAACTTCATACCGCGCTCT.....................................................2282.132.13
............................................................................TAGGAACTTCATACAGTGCTCT.....................................................2282.002.00
...............................AGCGAGGTATAGAGTTCCTACGTT................................................................................................2482.002.00
...............................AGCGAGGxxTAGAGTTCCTACG..................................................................................................2081.881.88
............................................................................TAGGAACTTCATACCCTGCTCT.....................................................2281.881.88
...............................CGCGAGGTATAGAGTTCCTACG..................................................................................................2281.751.75
...............................AGCGAGGTATAGAGTTCCAACG..................................................................................................2281.751.75
............................................................................TAGGAACTTCATACCGTGCTAT.....................................................2281.751.75
...............................AGCGTGGTATAGAGTTCCTACG..................................................................................................2281.751.75
...............................AGCGAGGTATAGAGTTCCTGCG..................................................................................................2281.631.63
............................................................................TAGGATCTTCATACCGTGCTCT.....................................................2281.631.63
............................................................................TAGGAACCTCATACCGTGCTCT.....................................................2281.631.63
............................................................................TAGGAACTTCACACCGTGCTCT.....................................................2281.631.63
...............................AGCGAGGTATAGAGTTCCTACGA.................................................................................................2381.631.63
............................................................................TAGGAAGTTCATACCGTGCTCT.....................................................2281.501.50
............................................................................TCGGAACTTCATACCGTGCTCT.....................................................2281.501.50
...............................AGCGAxGTATAGAGTTCCTACG..................................................................................................2181.381.38
............................................................................TAGGGACTTCATACCGTGCTCT.....................................................2281.381.38
............................................................................TAGGAACTTCCTACCGTGCTCT.....................................................2281.251.25
............................................................................TAGGAACTTCATACCGTGTTCT.....................................................2281.251.25
............................................................................TAGGAACTTCATACCGTCCTC......................................................2181.251.25
............................................................................TAGGAACTTCATACCGTGCTCTTT...................................................2481.251.25
7 scaffold_15112:4300268-4300411 - 36.21
CCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATA------AACTCGTAGGAACTTCATACCGTGCTC----------TTGGAAGACCAAAAAACAA--CCAAGTGAATGCAAAAATCC
TGTGTGT-TCTCTTATGTGGGTGTAGGTGTGTGTGGGTGGTGTGGGTGGTGTGGGTAGTGTGGGTGTAGGCGAATAGCAATTCAGTTATCTGTCGTAAAACATATTTGC-ATATCGATTAAAAACACAGTTGAAATATATATATAT
SizeHit CountTotal NormV109
Male body
.............................TGTGTGGGTGGTGTTGGTC..................................................................................................1920.500.50
.............................................GTGGTGTxGGTTGTGTGGG..................................................................................1840.250.25
....................................GTGGTGTxGGTTGTGTGGG...........................................................................................1840.250.25
................................GCGGGTGGAGTGGGTGGT................................................................................................1820.500.50
................................GAGGGTGGxGTGGGTGGTG...............................................................................................1820.500.50
................................GTGGGTGGTxTGGGTGGTTTG.............................................................................................2020.500.50


Generated: 04/20/2012 at 05:33:44 EDT