dme-mir-275- Best orthologs

dme-mir-275	chr2L:7425795-7425892 +	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 7425853-7425875
   star strand at position 7425814-7425836
   mutations
   read mismatches

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Species	Coordinate	Source	Confidence	Alignment
dm3	chr2L:7425780-7425907 +		1	TG--AT--GTTCC--CCCGACTGT----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TCT-CCAT----CTTCACC-------------------------AT
droSim1	chr2L:7217350-7217477 +	LASTZ	1	TG--AT--GTTCC--CCCGACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TCT-CCAT----CTCCGCC-------------------------AT
droSec1	super_3:2941240-2941367 +	LASTZ	1	TG--AT--GTTCC--CCCGACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTTGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TCT-CCAT----CTCCGTC-------------------------AT
droYak2	chr2L:5473766-5473897 -	LASTZ	1	TG--AT--GTTCC--CCCGACTGA-AC-------AGAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-CCAA----CTCCACG-----------------------ATAT
droEre2	scaffold_4929:16344506-16344633 +	LASTZ	1	TG--AT--GTTCC--CCCGACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-CCAT----CTCCACC-------------------------AT
droEug1	scf7180000409463:614687-614823 +	LASTZ	4	TG--AT--GTTCT--CCC---TGA-AAAGGCTTAAATGTCTTCTACCTTGCGCGCTAATCAGAGACCGGGGCTGGTTTT-----T--ACATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACA--TCT-CCATATGTCTTCATC-------------------------GC
droBia1	scf7180000302422:9125514-9125641 +	LASTZ	4	TG--AT--GTTCC--CCCGGCTTA-A--------AGAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--GTATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACAGACA--TCT-CCAC----ATCCACC-------------------------GC
droTak1	scf7180000415604:142420-142542 -	LASTZ	4	CG--AT--GTTCC--CCCGGCTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACA--TCT-CCAA----C----CC-------------------------AT
droEle1	scf7180000491028:1624838-1624954 -	LASTZ	4	T-------GTTC---CCCAACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----C--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-TCAT----TT-------------------------------T
droRho1	scf7180000766421:7649-7769 -	LASTZ	4	T-------GTTCC---CCAGCTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TTCATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-TCAT----TTCCA-----------------------------
droFic1	scf7180000454115:155668-155793 +	LASTZ	4	T-------GTTCC--CC-AGCTGGAAA-------AAAGTCTACTGCCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACA--TCT-CCAT----ATCCAGC-------------------------AC
droKik1	scf7180000302384:54817-54950 -	LASTZ	4	CGGGATGTGTTCCTTCCCAGCTGA-A--------AAAGTCTCTTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCA-TCGC----CAACAAC-------------------------TC
droAna3	scaffold_12916:15333987-15334092 +	LASTZ	1	A-------------------CTCT----------CCAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TG--CA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TC-------------CGCC-------------------------AT
droBip1	scf7180000396572:1689389-1689509 -	LASTZ	4	CC--AT--GTAC---------TCC----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TG--CA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TCCGCCAT----ATCCGAC-------------------------AT
dp4	chr4_group1:4175726-4175840 +	LASTZ	1	CC--AC--CTTC---------TTG----------AAAGTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGGTTTT-----TT-CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAACATCT---GT------------------------------------GT
droPer1	super_5:1086449-1086563 -	LASTZ	1	CC--AC--CTTC---------TTG----------AAAGTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGGTTTT-----TT-CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAACATCT---GT------------------------------------GT
droWil1	scaffold_180772:5257564-5257692 -	LASTZ	1	-------------------------------------GTCTCTTACCTTGCGCGCTAATCAGTGACCAGGGCTGAGTAATTTTATT-CAATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTT-TTAGACCAAGA--TT-------------CATCGCACGACGACGGCGACAACGACGACAC
droVir3	scaffold_12963:15419953-15420067 -	LASTZ	1	C--------------------TGC----------GCCGTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGGTTTTGGTTATC---CCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGTATTCATCT-----------TAAGC-------------------------TT
droMoj3	scaffold_6500:18399386-18399492 -	LASTZ	1	-------------------------------------GTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGGTTTCGATTATC---TCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCTAGACGCATT-----------------CAACGCTCT--------------------GC
droGri2	scaffold_15126:5008400-5008494 +	LASTZ	1	-------------------------------------GTCGTTTACCGCGCGCGCTAATCAGTGACCGGGGCTGGTTTTGATTATC---CCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGCAT-------------------------------------------------

Legend

0- The ortholog is absent. A better synthenic sequence candidate could not be found.
1- Reads w/ good pileup on mature and star strand & folds into hairpin structure.
2- Reads w/ good pileup on mature and star strand BUT does not fold into hairpin structure.
3- Sporadic reads & folds into a hairpin structure.
4- No reads but folds into a hairpin structure.
5- Ortholog is confident but miRNA appears absent (no reads and does not fold into a hairpin)

Re-alignment after removal of non-confident orthologs

Species	Alignment
dm3	TG--AT--GTTCC--CCCGACTGT----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TCT-CCAT----CTTCACC-------------------------AT
droSim1	TG--AT--GTTCC--CCCGACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TCT-CCAT----CTCCGCC-------------------------AT
droSec1	TG--AT--GTTCC--CCCGACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTTGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TCT-CCAT----CTCCGTC-------------------------AT
droYak2	TG--AT--GTTCC--CCCGACTGA-AC-------AGAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-CCAA----CTCCACG-----------------------ATAT
droEre2	TG--AT--GTTCC--CCCGACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-CCAT----CTCCACC-------------------------AT
droEug1	TG--AT--GTTCT--CCC---TGA-AAAGGCTTAAATGTCTTCTACCTTGCGCGCTAATCAGAGACCGGGGCTGGTTTT-----T--ACATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACA--TCT-CCATATGTCTTCATC-------------------------GC
droBia1	TG--AT--GTTCC--CCCGGCTTA-A--------AGAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--GTATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACAGACA--TCT-CCAC----ATCCACC-------------------------GC
droTak1	CG--AT--GTTCC--CCCGGCTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACA--TCT-CCAA----C----CC-------------------------AT
droEle1	T-------GTTC---CCCAACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----C--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-TCAT----TT-------------------------------T
droRho1	T-------GTTCC---CCAGCTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TTCATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-TCAT----TTCCA-----------------------------
droFic1	T-------GTTCC--CC-AGCTGGAAA-------AAAGTCTACTGCCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACA--TCT-CCAT----ATCCAGC-------------------------AC
droKik1	CGGGATGTGTTCCTTCCCAGCTGA-A--------AAAGTCTCTTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCA-TCGC----CAACAAC-------------------------TC
droAna3	A-------------------CTCT----------CCAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TG--CA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TC-------------CGCC-------------------------AT
droBip1	CC--AT--GTAC---------TCC----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TG--CA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TCCGCCAT----ATCCGAC-------------------------AT
dp4	CC--AC--CTTC---------TTG----------AAAGTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGGTTTT-----TT-CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAACATCT---GT------------------------------------GT
droPer1	CC--AC--CTTC---------TTG----------AAAGTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGGTTTT-----TT-CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAACATCT---GT------------------------------------GT
droWil1	-------------------------------------GTCTCTTACCTTGCGCGCTAATCAGTGACCAGGGCTGAGTAATTTTATT-CAATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTT-TTAGACCAAGA--TT-------------CATCGCACGACGACGGCGACAACGACGACAC
droVir3	C--------------------TGC----------GCCGTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGGTTTTGGTTATC---CCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGTATTCATCT-----------TAAGC-------------------------TT
droMoj3	-------------------------------------GTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGGTTTCGATTATC---TCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCTAGACGCATT-----------------CAACGCTCT--------------------GC
droGri2	-------------------------------------GTCGTTTACCGCGCGCGCTAATCAGTGACCGGGGCTGGTTTTGATTATC---CCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGCAT-------------------------------------------------

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

Small RNA-seq read pileup

Species

Alignment

droSim1

TG--AT--GTTCC--CCCGACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TCT-CCAT----CTCCGCC-------------------------AT	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
...............................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	4056.50	1370.50	1118.00	995.50	572.50
...............................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................	21	2	3384.50	2389.00	135.00	207.00	653.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	904.00	525.50	98.00	149.50	131.00
...............................................................................................TCAGGTACCTGAAGTAGCGC....................................................................	20	2	332.00	176.00	62.50	56.00	37.50
..................................................CGCGCTAATCAGTGACCGGGGCT..............................................................................................................	23	2	214.00	16.00	88.50	77.00	32.50
..................................................CGCGCTAATCAGTGACCGGGGC...............................................................................................................	22	2	111.00	14.50	51.00	36.00	9.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................	22	2	106.00	78.50	5.50	11.00	11.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................	22	2	93.00	61.00	10.50	18.00	3.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................	24	2	74.50	34.50	9.00	16.50	14.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................	24	2	64.00	32.00	5.50	16.50	10.00
...............................................................................................TCATGTACCTGAAGTAGCGCG...................................................................	21	2	43.00	1.00	1.50	3.50	37.00
...............................................................................................TCATGTACCTGAAGTAGCGCGC..................................................................	22	2	35.00	0.00	15.00	7.50	12.50
...............................................................................................TCAGGGACCTGAAGTAGCGCG...................................................................	21	2	33.00	25.00	1.50	1.50	5.00
..................................................CGCGCTAATCAGTGACCGGGGCC..............................................................................................................	23	2	30.50	0.00	14.00	10.00	6.50
...............................................................................................TCAGGTACCTGCAGTAGCGCG...................................................................	21	2	30.50	30.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................	22	2	25.50	2.50	5.50	12.00	5.50
..................................................CGCGCTAATCAGTGACCGGGGCTT.............................................................................................................	24	2	21.50	2.00	9.00	10.00	0.50
...............................................................................................TCAGGGACCTGAAGTAGCGCGC..................................................................	22	2	19.50	11.00	2.50	3.00	3.00
..................................................CGCGCTAATCAGTGACCG...................................................................................................................	18	2	18.00	0.00	12.50	5.00	0.50
.................................................................................................AGGTACCTGAAGTAGCGCG...................................................................	19	2	18.00	17.00	0.00	0.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................	23	2	17.00	15.50	1.50	0.00	0.00
...............................................................................................TCAGTTACCTGAAGTAGCGCGC..................................................................	22	2	16.50	0.00	4.50	4.00	8.00
...............................................................................................TCAGGTACCTGAAGTAGCG.....................................................................	19	2	15.00	6.00	5.50	3.00	0.50
.................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................	20	2	14.50	11.50	2.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCAC..................................................................	22	2	14.50	0.00	6.00	7.00	1.50
...............................................................................................TCAGGTACCTGCAGTAGCGCGC..................................................................	22	2	14.50	14.50	0.00	0.00	0.00
...............................................................................................TCACGTACCTGAAGTAGCGCG...................................................................	21	2	14.00	0.50	0.00	0.50	13.00
...............................................................................................TCAGGTACCTGACGTAGCGCG...................................................................	21	2	13.50	13.50	0.00	0.00	0.00
...............................................................................................TCACGTACCTGAAGTAGCGCGC..................................................................	22	2	12.50	0.50	6.00	2.00	4.00
...............................................................................................TCAxGTACCTGAAGTAGCGCG...................................................................	20	2	12.50	0.00	0.50	0.50	11.50
...............................................................................................TCAGGCACCTGAAGTAGCGCGC..................................................................	22	2	12.00	9.50	1.00	1.00	0.50
...............................................................................................TCAxGTACCTGAAGTAGCGCGC..................................................................	21	2	11.50	0.00	4.50	2.00	5.00
...............................................................................................TCATGTACCTGAAGTAGCGCGCG.................................................................	23	2	11.00	0.00	2.00	1.50	7.50
...............................................................................................TCAGGTACCTCAAGTAGCGCGC..................................................................	22	2	11.00	0.50	5.00	1.00	4.50
...............................................................................................TCAGGTACCTGGAGTAGCGCG...................................................................	21	2	10.00	9.50	0.00	0.00	0.50
...............................................................................................TCAGGTACCTGAAGGAGCGCGC..................................................................	22	2	10.00	5.00	1.00	2.50	1.50
..................................................CGCGCTAATCAGTGACCGGGG................................................................................................................	21	2	9.50	2.00	4.00	2.50	1.00
...............................................................................................TCAGGCACCTGAAGTAGCGCG...................................................................	21	2	9.50	9.00	0.00	0.00	0.50
...............................................................................................TCAGGTACCTGACGTAGCGCGC..................................................................	22	2	9.50	9.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGGAGCGCG...................................................................	21	2	9.00	7.00	1.00	0.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................	24	2	9.00	0.00	3.00	1.50	4.50
...............................................................................................TCAGGTACCTGAAGTCGCGCG...................................................................	21	2	8.50	8.50	0.00	0.00	0.00
...............................................................................................TCAGGTAACTGAAGTAGCGCG...................................................................	21	2	8.50	7.00	0.00	0.50	1.00
..................................................CGCGCTAATCAGTGACCGGGGCG..............................................................................................................	23	2	8.00	0.00	2.50	3.50	2.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................	24	2	8.00	3.50	1.00	1.50	2.00
...............................................................................................TCAGGTACCTGCAGTAGCGCGCG.................................................................	23	2	7.00	7.00	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGC......................................................................	18	2	7.00	0.00	2.50	4.50	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGC..................................................................	22	2	6.00	1.50	2.00	2.50	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGCGCG.................................................................	23	2	6.00	4.50	0.00	0.00	1.50
...............................................................................................TCGGGTACCTGAAGTAGCGCG...................................................................	21	2	6.00	5.50	0.00	0.00	0.50
................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................	21	2	6.00	2.00	1.00	3.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................	23	2	6.00	2.50	2.00	1.50	0.00
...............................................................................................TCAGGTACCTTAAGTAGCGCGC..................................................................	22	2	5.50	0.50	1.00	2.00	2.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................	25	2	5.50	3.00	0.00	2.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCTC..................................................................	22	2	5.50	1.00	3.50	0.50	0.50
...............................................................................................TAAGGTACCTGAAGTAGCGCG...................................................................	21	2	5.50	5.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCACGC..................................................................	22	2	5.50	2.00	2.00	1.50	0.00
...............................................................................................TCAGGTAACTGAAGTAGCGCGC..................................................................	22	2	5.50	5.00	0.00	0.50	0.00
...............................................................................................TCAGGTACCTGTAGTAGCGCG...................................................................	21	2	5.00	5.00	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................	24	2	5.00	3.50	0.00	0.00	1.50
...............................................................................................TCAGGTACATGAAGTAGCGCG...................................................................	21	2	5.00	5.00	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGC..................................................................	22	2	4.50	2.50	1.50	0.00	0.50
.................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................	21	2	4.50	4.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCG...................................................................	21	2	4.50	3.50	0.00	0.50	0.50
...............................................................................................TCGGGTACCTGAAGTAGCGCGC..................................................................	22	2	4.50	2.00	2.00	0.00	0.50
...............................................................................................TCAGGTACCTGAAGTGGCGCG...................................................................	21	2	4.50	3.50	0.50	0.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGAG...................................................................	21	2	4.50	4.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGTG...................................................................	21	2	4.50	4.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGTGCG...................................................................	21	2	4.50	4.00	0.00	0.50	0.00
..................................................CGCGCTAATCAGTGACCGGGAC...............................................................................................................	22	2	4.50	0.00	3.50	0.50	0.50
...............................................................................................TCAGGTACCTGAAGTATCGCGC..................................................................	22	2	4.50	2.00	2.00	0.00	0.50
...............................................................................................TCAGGTACCTGACGTAGCGCGCG.................................................................	23	2	4.00	4.00	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCTCGC..................................................................	22	2	4.00	1.50	2.00	0.50	0.00
....................................................................................................................................ATC--TCT-CCTT----CTCCGCC-------------------------A.	18	2	4.00	0.00	0.50	3.50	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGC....................................................................	20	2	4.00	2.50	1.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCTCG.................................................................	23	2	4.00	0.00	3.50	0.50	0.00
...............................................................................................TCAGGTACCTGGAGTAGCGCGC..................................................................	22	2	4.00	2.50	0.00	1.00	0.50
...............................................................................................TCAGGTGCCTGAAGTAGCGCGC..................................................................	22	2	4.00	2.50	0.50	0.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGAGCGC..................................................................	22	2	3.50	3.50	0.00	0.00	0.00
..................................................CGCGCTAATCAGTGACCGG..................................................................................................................	19	2	3.50	0.00	3.00	0.50	0.00
..............................................................................................CTCAGGTACCTGAAGTAGCGCG...................................................................	22	2	3.50	3.00	0.00	0.00	0.50
...............................................................................................TCAGGTACCCGAAGTAGCGCGCG.................................................................	23	2	3.50	3.00	0.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGCG.................................................................	23	2	3.50	1.00	1.50	0.50	0.50
...............................................................................................TCAGGTACCTGATGTAGCGCG...................................................................	21	2	3.50	3.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................	21	2	3.50	2.50	0.00	0.00	1.00
...............................................................................................TCAGGTGCCTGAAGTAGCGCG...................................................................	21	2	3.50	3.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................	21	2	3.50	2.50	0.00	0.00	1.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTT................................................................	24	2	3.50	1.00	0.50	1.00	1.00
................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................	20	2	3.50	1.50	1.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGAGCG...................................................................	21	2	3.50	3.50	0.00	0.00	0.00
...............................................................................................TCAGTTACCTGAAGTAGCGCG...................................................................	21	2	3.50	0.00	0.00	0.50	3.00
...............................................................................................CCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	3.50	1.50	1.50	0.00	0.50
...............................................................................................CCAGGTACCTGAAGTAGCGCG...................................................................	21	2	3.00	3.00	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................	24	2	3.00	2.00	0.00	0.50	0.50
...............................................................................................TCAGGTACCTGAAGTCGCGCGCG.................................................................	23	2	3.00	3.00	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGCCGTAGCGCG...................................................................	21	2	3.00	3.00	0.00	0.00	0.00
..................................................CGCGCTAATCAGTGACCGGG.................................................................................................................	20	2	3.00	0.50	2.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................	23	2	3.00	2.50	0.50	0.00	0.00
...................................................GCGCTAATCAGTGACCGGGGCT..............................................................................................................	22	2	3.00	0.00	1.50	1.00	0.50
..................................................CGCGCTAATCAGTGACCGGGGCTC.............................................................................................................	24	2	3.00	0.00	1.50	1.50	0.00
...............................................................................................TCAGGTACATGAAGTAGCGCGC..................................................................	22	2	3.00	3.00	0.00	0.00	0.00

droSec1

TG--AT--GTTCC--CCCGACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTTGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TCT-CCAT----CTCCGTC-------------------------AT	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
...............................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	35129.50	10393.50	10647.00	14089.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	20979.00	10923.00	5076.50	4979.50
...............................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................	21	2	18672.50	9044.00	5712.00	3916.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................	24	2	2788.00	964.00	964.50	859.50
...............................................................................................TCAGGTACCTGAAGTAGCGC....................................................................	20	2	2413.00	1540.50	494.00	378.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................	22	2	1206.50	718.50	272.50	215.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................	24	2	944.00	563.50	148.50	232.00
..................................................CGCGCTAATCAGTGACCGGGGCT..............................................................................................................	23	2	842.50	198.00	460.50	184.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................	22	2	742.00	524.50	153.50	64.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................	25	2	382.50	172.50	28.00	182.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................	23	2	340.50	169.00	39.50	132.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................	23	2	271.00	70.00	120.00	81.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGCG.................................................................	23	2	221.50	62.50	9.50	149.50
.................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................	21	2	206.00	35.50	80.00	90.50
..................................................CGCGCTAATCAGTGACCGGGGC...............................................................................................................	22	2	187.50	38.50	35.00	114.00
...............................................................................................TCAGGTACCTGAAGTAGCG.....................................................................	19	2	167.50	76.00	45.00	46.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................	23	2	143.00	85.50	8.00	49.50
...............................................................................................TCAGGTACCTGAAGTGGCGCGC..................................................................	22	2	141.50	98.00	4.50	39.00
...............................................................................................TCAGGTACCTGAAGTAGCCCGCG.................................................................	23	2	131.00	102.50	11.00	17.50
...............................................................................................TCAGGTACCTGAAGTAGCACGCG.................................................................	23	2	127.50	92.50	7.00	28.00
.................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................	20	2	119.50	52.00	35.50	32.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTT................................................................	24	2	117.50	68.00	3.50	46.00
.................................................................................................AGGTACCTGAAGTAGCGCG...................................................................	19	2	113.50	33.00	51.50	29.00
...............................................................................................TCAGGTACCTGAAGTAGCCCGC..................................................................	22	2	108.50	93.50	9.50	5.50
...............................................................................................TCAGGTACCTGAAGTAGCACGC..................................................................	22	2	100.00	92.00	2.50	5.50
..................................................CGCGCTAATCAGTGACCGGGGCTT.............................................................................................................	24	2	99.00	48.50	7.00	43.50
...............................................................................................TCAGGTACCTGAAGTAGCCCG...................................................................	21	2	98.00	87.50	7.50	3.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................	23	2	93.50	39.50	20.00	34.00
...............................................................................................TCAGGTACCTGAAGTAGCACG...................................................................	21	2	91.00	80.50	4.00	6.50
...............................................................................................TCAGGTACCTGAAGTAGCTCGCG.................................................................	23	2	86.00	66.00	4.50	15.50
...............................................................................................TCAGGTACCTGAAGTGGCGCG...................................................................	21	2	86.00	58.00	5.00	23.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................	24	2	81.00	24.00	32.50	24.50
...............................................................................................TCAGGTACCTGAAGTAGCTCGC..................................................................	22	2	72.50	61.50	3.00	8.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGCG.................................................................	23	2	71.00	19.00	36.50	15.50
...............................................................................................TCAGGTACCTGAAGTAGC......................................................................	18	2	69.50	0.00	30.50	39.00
...............................................................................................TCAGGTACCTGAAGTAGTGCGCG.................................................................	23	2	65.50	8.00	46.50	11.00
...............................................................................................TCAGGTACCTGAAGTGGCGC....................................................................	20	2	65.50	56.50	0.00	9.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGCG.................................................................	23	2	65.00	32.00	12.00	21.00
..................................................CGCGCTAATCAGTGACCGGGG................................................................................................................	21	2	63.50	24.50	10.50	28.50
...............................................................................................TCAGGTACCTGAAGTAGCGCCCG.................................................................	23	2	62.50	25.50	15.50	21.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................	24	2	61.50	23.50	12.00	26.00
...............................................................................................TCAGGTACCTGAAGTCGCGCGCG.................................................................	23	2	61.00	17.50	26.00	17.50
...............................................................................................TCAGGTACCTGAAGTAGCTCG...................................................................	21	2	59.00	54.50	0.50	4.00
...............................................................................................TCAGGTACCCGAAGTAGCGCGCG.................................................................	23	2	54.50	13.00	23.00	18.50
...............................................................................................TCAGGTACCTGAAGTACCGCGCG.................................................................	23	2	54.00	9.00	26.00	19.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................	25	2	49.50	19.50	12.50	17.50
...............................................................................................TCAGGTACCTGAAGTATCGCGCG.................................................................	23	2	47.50	12.50	7.50	27.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGTG.................................................................	23	2	47.50	8.50	30.00	9.00
...............................................................................................TCAGTTACCTGAAGTAGCGCGCG.................................................................	23	2	46.50	7.00	17.50	22.00
...............................................................................................TCAGGTACCTGAAGTAGCGTGCG.................................................................	23	2	46.00	10.50	25.50	10.00
...............................................................................................TCAGGTACCTGACGTAGCGCGCG.................................................................	23	2	45.50	16.00	10.00	19.50
...............................................................................................TCAGGTACCTGAAGTACCGCGC..................................................................	22	2	44.00	26.50	13.00	4.50
...............................................................................................TCAGGTACCTGAAGCAGCGCGC..................................................................	22	2	43.50	21.00	16.50	6.00
...............................................................................................TCAGGTACCTGAAGTAGCGTGC..................................................................	22	2	43.50	10.00	30.50	3.00
...............................................................................................TCAGGTACCTGAAGTAGAGCGCG.................................................................	23	2	42.00	14.00	10.00	18.00
...............................................................................................TCAGGTACCTGAGGTAGCGCGCG.................................................................	23	2	42.00	8.50	23.00	10.50
...............................................................................................TCATGTACCTGAAGTAGCGCGCG.................................................................	23	2	41.50	9.00	11.00	21.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................	26	2	40.50	26.00	3.50	11.00
...............................................................................................TCAGGCACCTGAAGTAGCGCG...................................................................	21	2	40.50	23.50	11.50	5.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................	23	2	40.00	33.00	3.50	3.50
...............................................................................................TTAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	39.50	1.50	33.00	5.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCC..................................................................	22	2	39.50	32.50	3.00	4.00
...............................................................................................TCAGGTATCTGAAGTAGCGCGCG.................................................................	23	2	38.50	2.50	28.00	8.00
................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................	22	2	38.50	8.50	12.00	18.00
...............................................................................................TCAGGAACCTGAAGTAGCGCGCG.................................................................	23	2	37.50	10.00	2.50	25.00
...............................................................................................TCAGGTACCTGAAGTAGCGCACG.................................................................	23	2	37.00	12.50	8.50	16.00
...............................................................................................TCAGGTACTTGAAGTAGCGCGCG.................................................................	23	2	37.00	3.50	30.50	3.00
...............................................................................................CCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	36.50	13.00	10.50	13.00
...............................................................................................TCAGGTACCTGAAGTAGTGCGC..................................................................	22	2	36.00	6.50	25.00	4.50
...............................................................................................TCAGGTACCTGAATTAGCGCGCG.................................................................	23	2	34.00	10.00	5.50	18.50
...............................................................................................TCAGGTACCTGAAGTAGCGCTCG.................................................................	23	2	34.00	12.00	4.00	18.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................	25	2	33.00	18.00	6.00	9.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGAG.................................................................	23	2	33.00	9.50	4.00	19.50
...............................................................................................TCAGGTACCTGAAGTGGCGCGCGA................................................................	24	2	33.00	23.50	0.50	9.00
...............................................................................................TTAGGTACCTGAAGTAGCGCGC..................................................................	22	2	33.00	5.00	25.50	2.50
...............................................................................................TCAGGTACCCGAAGTAGCGCG...................................................................	21	2	32.00	12.50	10.50	9.00
...............................................................................................TCAGTTACCTGAAGTAGCGCGC..................................................................	22	2	31.50	13.50	7.50	10.50
...............................................................................................TCAGGTACCTGAACTAGCGCGCG.................................................................	23	2	31.50	11.50	8.50	11.50
...............................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................	21	2	30.50	16.00	10.00	4.50
...............................................................................................TCAGCTACCTGAAGTAGCGCGCG.................................................................	23	2	28.50	7.00	8.50	13.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGC..................................................................	22	2	28.50	17.50	6.00	5.00
...............................................................................................TCAGGTACCTGAAGTAGCGAGCG.................................................................	23	2	28.00	5.00	3.00	20.00
...............................................................................................TCGGGTACCTGAAGTAGCGCGCG.................................................................	23	2	28.00	4.00	14.00	10.00
................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................	21	2	28.00	12.00	8.50	7.50
...............................................................................................TCAGGTGCCTGAAGTAGCGCGCG.................................................................	23	2	28.00	7.50	11.00	9.50
...............................................................................................TCAxGTACCTGAAGTAGCGCGCG.................................................................	22	2	27.50	4.50	10.00	13.00
...............................................................................................TCAGGTACATGAAGTAGCGCGCG.................................................................	23	2	26.50	4.00	6.50	16.00
...............................................................................................TCAGGTACCCGAAGTAGCGCGC..................................................................	22	2	26.00	11.50	9.00	5.50
...............................................................................................TCAGGTAACTGAAGTAGCGCGCG.................................................................	23	2	25.50	2.50	3.50	19.50
...............................................................................................TCACGTACCTGAAGTAGCGCGCG.................................................................	23	2	25.50	7.00	5.00	13.50
..................................................CGCGCTAATCAGTGACCGGGGT...............................................................................................................	22	2	25.00	13.00	2.50	9.50
...............................................................................................TCAGTTACCTGAAGTAGCGCG...................................................................	21	2	25.00	10.00	10.00	5.00
...............................................................................................TCAGGTACCTGAAGCAGCGCG...................................................................	21	2	24.50	10.50	11.50	2.50
...............................................................................................TCAGGTACCTGAGGTAGCGCGC..................................................................	22	2	24.50	8.50	10.00	6.00
..............................................................................................CTCAGGTACCTGAAGTAGCGCGCG.................................................................	24	2	24.00	2.00	8.00	14.00
...............................................................................................TTAGGTACCTGAAGTAGCGCG...................................................................	21	2	24.00	2.50	19.00	2.50
...............................................................................................CCAGGTACCTGAAGTAGCGCG...................................................................	21	2	23.50	13.50	6.00	4.00
...............................................................................................TCAGGTACCTGAAGTAGTGCG...................................................................	21	2	23.50	6.00	14.50	3.00
...............................................................................................TCAGGTACCTGAAGTATCGCGC..................................................................	22	2	23.00	11.00	3.50	8.50
...............................................................................................TCAGGTACCTCAAGTAGCGCGCG.................................................................	23	2	23.00	6.00	8.00	9.00
...............................................................................................TCAGGTACCTGAGGTAGCGCG...................................................................	21	2	22.50	7.50	10.50	4.50

droYak2

TG--AT--GTTCC--CCCGACTGA-AC-------AGAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-CCAA----CTCCACG-----------------------ATAT	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
...............................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................	21	2	5033.50	1878.00	202.50	2533.00	397.50	22.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	4623.50	537.50	364.00	2258.50	652.50	811.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	2034.50	380.50	106.50	1218.00	173.00	156.50
...............................................................................................TCAGGTACCTGAAGTAGCGC....................................................................	20	2	1163.50	103.00	55.50	872.00	123.00	10.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................	22	2	303.50	24.00	23.50	203.50	50.50	2.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................	24	2	219.50	17.00	4.00	122.50	7.00	69.00
..................................................CGCGCTAATCAGTGACCGGGGCT..............................................................................................................	23	2	213.50	9.00	26.50	70.00	42.50	65.50
...............................................................................................TCAGGTACCTGAAGTAGCG.....................................................................	19	2	152.00	5.50	17.00	91.50	37.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................	22	2	70.50	34.00	5.00	28.50	3.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................	24	2	51.50	15.00	0.00	20.00	0.00	16.50
...............................................................................................TCAGGTACCTGCAGTAGCGCG...................................................................	21	2	41.00	26.50	4.50	1.00	9.00	0.00
..................................................CGCGCTAATCAGTGACCGGGGC...............................................................................................................	22	2	34.50	3.50	1.50	1.50	3.50	24.50
.................................................................................................AGGTACCTGAAGTAGCGCG...................................................................	19	2	32.50	17.00	1.50	12.00	2.00	0.00
...............................................................................................TCAGGTACCTGACGTAGCGCG...................................................................	21	2	30.00	9.00	1.50	10.50	9.00	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGCGC..................................................................	22	2	29.50	4.00	3.50	4.00	15.00	3.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................	23	2	29.00	1.00	1.50	22.50	4.00	0.00
.................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................	20	2	27.50	3.50	2.00	19.50	2.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................	23	2	26.00	3.50	2.50	16.00	4.00	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGCG...................................................................	21	2	22.00	12.00	1.50	3.00	5.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................	23	2	20.00	5.00	1.00	11.50	2.50	0.00
...............................................................................................TCAGGTACCTGCAGTAGCGCGC..................................................................	22	2	20.00	6.00	1.00	0.00	11.50	1.50
...............................................................................................TCAGGTACCTGACGTAGCGCGC..................................................................	22	2	19.50	2.00	0.00	8.00	9.50	0.00
...............................................................................................TCAGGTACCTGCAGTAGCGCGCG.................................................................	23	2	17.00	5.50	3.50	1.50	6.50	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCG...................................................................	21	2	16.50	5.00	0.00	5.00	6.50	0.00
.................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................	21	2	16.50	4.00	1.50	8.50	2.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................	24	2	15.50	0.50	0.50	0.50	0.00	14.00
..................................................CGCGCTAATCAGTGACCGGGG................................................................................................................	21	2	15.00	0.50	2.50	5.00	6.00	1.00
...............................................................................................TCAGGTACCTGACGTAGCGCGCG.................................................................	23	2	14.50	2.50	0.00	5.50	6.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGC......................................................................	18	2	14.00	0.00	5.00	0.00	9.00	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGC..................................................................	22	2	13.00	2.50	2.50	2.50	5.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................	25	2	13.00	0.50	0.00	12.00	0.00	0.50
...............................................................................................TCAGGGACCTGAAGTAGCGCGCG.................................................................	23	2	13.00	2.50	1.00	5.50	3.00	1.00
...............................................................................................TCATGTACCTGAAGTAGCGCGC..................................................................	22	2	13.00	0.00	0.50	2.00	0.50	10.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTT................................................................	24	2	12.50	1.00	0.00	10.00	0.50	1.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGC..................................................................	22	2	12.00	1.50	0.50	8.00	2.00	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCG...................................................................	21	2	11.00	3.50	0.50	6.00	1.00	0.00
..................................................CGCGCTAATCAGTGACCGGGGCC..............................................................................................................	23	2	11.00	0.00	0.00	0.00	0.00	11.00
...............................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................	21	2	11.00	2.00	0.50	8.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTATCGCGC..................................................................	22	2	11.00	0.00	1.50	5.00	3.00	1.50
...............................................................................................TCAGGTACCTGAAGTAGCGCCC..................................................................	22	2	10.00	0.50	0.00	7.50	1.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................	22	2	10.00	0.00	2.00	1.50	0.00	6.50
...............................................................................................TCAGGTACCTGAAGTACCGCGC..................................................................	22	2	9.00	0.00	0.50	7.00	1.50	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGC....................................................................	20	2	8.50	0.00	1.00	1.50	6.00	0.00
...............................................................................................TCAGGTACCTGAAGGAGCGCGC..................................................................	22	2	8.00	2.00	0.00	1.00	5.00	0.00
...............................................................................................TCAGGTACCTGAGGTAGCGCG...................................................................	21	2	8.00	2.50	1.00	3.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................	21	2	8.00	0.50	0.00	6.50	1.00	0.00
..................................................CGCGCTAATCAGTGACCGGGGCTT.............................................................................................................	24	2	7.50	0.00	1.50	1.50	0.50	4.00
...............................................................................................TCAGGTACCTGGAGTAGCGCG...................................................................	21	2	7.50	6.00	0.50	0.50	0.50	0.00
...............................................................................................TCAGGTACCTGAGGTAGCGCGC..................................................................	22	2	7.50	1.50	0.50	4.00	1.00	0.50
...............................................................................................TCAGGTACCTGAAGTAACGCGC..................................................................	22	2	7.50	1.00	0.50	4.50	0.50	1.00
...............................................................................................TCAGGTACCTGGAGTAGCGCGC..................................................................	22	2	7.00	2.00	1.00	1.00	2.50	0.50
...............................................................................................TCAGGTACCTGAAGGAGCGCG...................................................................	21	2	7.00	4.50	1.00	0.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCCG.................................................................	23	2	7.00	0.50	0.00	6.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGAGCGC..................................................................	22	2	7.00	2.50	0.50	0.50	2.50	1.00
...............................................................................................TCAGGTACCTGAAGTAGCTCGC..................................................................	22	2	7.00	0.00	1.00	3.50	1.50	1.00
...............................................................................................TCAGGTACCTGAAGTAGCGCTCG.................................................................	23	2	7.00	0.00	0.00	3.00	1.00	3.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................	24	2	6.50	0.50	0.00	1.00	0.00	5.00
...............................................................................................TCAGGTACCTGAAGTATCGCGCG.................................................................	23	2	6.50	0.50	0.50	4.50	1.00	0.00
...............................................................................................TCAGTTACCTGAAGTAGCGCGC..................................................................	22	2	6.50	0.00	0.00	3.00	0.00	3.50
...............................................................................................TCAGGTACCTGAAGTAGAGCG...................................................................	21	2	6.50	4.50	0.00	2.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................	21	2	6.50	0.50	0.50	4.00	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTACCGCG...................................................................	21	2	6.50	1.00	0.50	4.50	0.50	0.00
...............................................................................................ACAGGTACCTGAAGTAGCGCG...................................................................	21	2	6.00	1.00	0.50	2.50	2.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCAC..................................................................	22	2	6.00	0.00	0.50	1.50	0.50	3.50
...............................................................................................TCAGGTACCTGAAGTAGCGT....................................................................	20	2	6.00	0.00	1.00	3.50	1.50	0.00
...............................................................................................TCGGGTACCTGAAGTAGCGCG...................................................................	21	2	6.00	2.50	0.00	2.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGC..................................................................	22	2	5.50	1.50	0.00	1.00	1.50	1.50
...............................................................................................TCAGGCACCTGAAGTAGCGCGCG.................................................................	23	2	5.50	0.50	1.00	1.00	2.50	0.50
...............................................................................................CCAGGTACCTGAAGTAGCGCG...................................................................	21	2	5.50	1.50	0.00	2.50	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCCCG...................................................................	21	2	5.50	1.00	0.50	1.50	2.00	0.50
...............................................................................................TCAGGTACCTGAAGTCGCGCG...................................................................	21	2	5.50	2.50	1.00	0.50	1.50	0.00
................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................	21	2	5.50	0.50	0.50	1.50	1.50	1.50
...............................................................................................TCAGGTACCTGAAGTAGCCCGC..................................................................	22	2	5.00	1.00	0.50	1.50	2.00	0.00
...............................................................................................TCACGTACCTGAAGTAGCGCGC..................................................................	22	2	5.00	0.50	0.00	2.00	0.00	2.50
...............................................................................................TCAGGTAACTGAAGTAGCGCGC..................................................................	22	2	5.00	3.50	0.00	0.50	0.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCTC..................................................................	22	2	5.00	0.00	1.50	2.00	1.00	0.50
...............................................................................................TCAGGTACCTCAAGTAGCGCGC..................................................................	22	2	4.50	0.50	0.00	0.50	0.50	3.00
...............................................................................................CCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	4.50	0.50	0.00	2.50	1.00	0.50
...............................................................................................TCAGGTACCTGAAGAAGCGCG...................................................................	21	2	4.50	1.50	0.00	1.00	2.00	0.00
...............................................................................................TCAGCTACCTGAAGTAGCGCGC..................................................................	22	2	4.50	0.50	0.00	1.00	0.00	3.00
...............................................................................................TCAGGAACCTGAAGTAGCGCG...................................................................	21	2	4.50	3.00	0.00	0.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTACCGCGCG.................................................................	23	2	4.50	0.50	0.00	2.50	1.00	0.50
...............................................................................................TCAGGTACCTGATGTAGCGCG...................................................................	21	2	4.50	1.00	0.50	0.50	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCTCG...................................................................	21	2	4.50	1.50	0.50	1.50	1.00	0.00
...............................................................................................TCAGGTACCCGAAGTAGCGCGC..................................................................	22	2	4.50	0.50	0.50	1.50	1.00	1.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................	23	2	4.50	0.50	0.00	3.00	0.50	0.50
...............................................................................................TCAGGTACCTGAAGTACCGC....................................................................	20	2	4.50	0.00	0.00	4.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTATCGCG...................................................................	21	2	4.50	1.00	0.00	2.00	1.50	0.00
...............................................................................................TCAGGTACCTTAAGTAGCGCGC..................................................................	22	2	4.00	0.00	0.50	1.50	0.50	1.50
...............................................................................................TCAGGTACCTGAATTAGCGCG...................................................................	21	2	4.00	0.00	0.00	4.00	0.00	0.00
...............................................................................................TCAGGTACATGAAGTAGCGCG...................................................................	21	2	4.00	3.00	0.00	1.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGCG.................................................................	23	2	4.00	0.00	0.50	2.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCACG...................................................................	21	2	4.00	1.50	1.00	0.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCTT..................................................................	22	2	4.00	0.00	0.00	3.00	0.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGTG...................................................................	21	2	4.00	1.50	0.00	2.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGAG...................................................................	21	2	4.00	1.50	0.50	2.00	0.00	0.00
...............................................................................................TAAGGTACCTGAAGTAGCGCG...................................................................	21	2	4.00	2.50	0.50	0.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGCG.................................................................	23	2	4.00	0.00	0.00	1.50	1.50	1.00
.................................................................................................AGGTACCTGAAGTAGCGC....................................................................	18	2	4.00	0.00	0.50	3.00	0.50	0.00
...............................................................................................TCAGGTACCTGTAGTAGCGCG...................................................................	21	2	4.00	2.50	0.00	0.00	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCACGC..................................................................	22	2	4.00	1.00	0.00	1.00	1.50	0.50

droEre2

TG--AT--GTTCC--CCCGACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-CCAT----CTCCACC-------------------------AT	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
...............................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	15070.00	175.50	1188.50	0.00	13706.00
...............................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................	21	2	7750.00	755.50	719.50	0.00	6275.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	4687.00	304.00	787.00	0.00	3596.00
...............................................................................................TCAGGTACCTGAAGTAGCGC....................................................................	20	2	579.00	37.00	75.50	0.00	466.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................	24	2	479.50	1.50	63.50	0.00	414.50
..................................................CGCGCTAATCAGTGACCGGGGCT..............................................................................................................	23	2	338.00	23.50	38.00	0.00	276.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................	23	2	296.00	1.50	15.00	0.00	279.50
...............................................................................................TCAGGTACCTGAAGTAGCG.....................................................................	19	2	215.50	1.00	35.00	0.00	179.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................	22	2	205.00	10.00	43.50	0.00	151.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................	23	2	185.00	4.50	6.50	0.00	174.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................	23	2	163.00	2.50	2.50	0.00	158.00
...............................................................................................TCATGTACCTGAAGTAGCGCGCG.................................................................	23	2	132.00	0.50	0.00	0.00	131.50
...............................................................................................TCAGGTACCTGAAGTATCGCGCG.................................................................	23	2	123.00	2.00	8.00	0.00	113.00
.................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................	21	2	118.00	0.50	11.00	0.00	106.50
...............................................................................................TCAGGTACCTGAAGTAGCGCTCG.................................................................	23	2	113.50	1.00	1.50	0.00	111.00
...............................................................................................TCAGGTACCTGAAGTAGCTCGCG.................................................................	23	2	107.50	1.00	5.00	0.00	101.50
..................................................CGCGCTAATCAGTGACCGGGGC...............................................................................................................	22	2	104.50	4.50	3.50	0.00	96.50
...............................................................................................TAAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	92.50	0.00	0.50	0.00	92.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGAG.................................................................	23	2	92.00	0.00	2.50	0.00	89.50
...............................................................................................TCAGGTACCTTAAGTAGCGCGCG.................................................................	23	2	92.00	2.00	3.50	0.00	86.50
...............................................................................................TCAGGTACATGAAGTAGCGCGCG.................................................................	23	2	85.00	0.00	0.50	0.00	84.50
...............................................................................................TCAGGTACCTGAAGTAGC......................................................................	18	2	84.00	0.00	0.00	0.00	84.00
...............................................................................................TCAGGTACCTGAAGTAGCGAGCG.................................................................	23	2	75.50	0.00	3.00	0.00	72.50
..................................................CGCGCTAATCAGTGACCGGGG................................................................................................................	21	2	73.00	1.00	7.00	0.00	65.00
...............................................................................................TCAGGTACCTGAAGTATCGCG...................................................................	21	2	65.00	7.50	1.50	0.00	56.00
...............................................................................................TCAGGTACCTGAAGTAGAGCGCG.................................................................	23	2	65.00	0.00	3.00	0.00	62.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................	24	2	55.50	2.50	4.00	0.00	49.00
...............................................................................................TCATGTACCTGAAGTAGCGCG...................................................................	21	2	52.50	2.50	0.00	0.00	50.00
...............................................................................................TCAGGTACCTGAAGTAGCTCG...................................................................	21	2	51.50	9.50	1.50	0.00	40.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................	22	2	48.00	15.50	6.00	0.00	26.50
.................................................................................................AGGTACCTGAAGTAGCGCG...................................................................	19	2	46.50	5.00	4.00	0.00	37.50
...............................................................................................TCAGTTACCTGAAGTAGCGCGCG.................................................................	23	2	46.00	0.50	0.50	0.00	45.00
...............................................................................................TAAGGTACCTGAAGTAGCGCG...................................................................	21	2	44.50	1.00	0.50	0.00	43.00
...............................................................................................TCAGGTACCTTAAGTAGCGCG...................................................................	21	2	43.50	3.00	2.00	0.00	38.50
...............................................................................................TCAGGTACCTGAATTAGCGCGCG.................................................................	23	2	43.00	0.50	8.00	0.00	34.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................	25	2	42.00	0.00	3.00	0.00	39.00
...............................................................................................TCAGGTACCTGAAGTATCGCGC..................................................................	22	2	41.50	5.00	3.00	0.00	33.50
...............................................................................................TCAGGTACATGAAGTAGCGCG...................................................................	21	2	38.50	1.00	0.00	0.00	37.50
...............................................................................................TCAGGCACCTGAAGTAGCGCGCG.................................................................	23	2	36.50	0.00	2.50	0.00	34.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGCG.................................................................	23	2	35.50	0.00	1.00	0.00	34.50
...............................................................................................TCAGGTACCTGACGTAGCGCGCG.................................................................	23	2	35.00	2.50	12.00	0.00	20.50
...............................................................................................TCAGGTACCTGAAGTAGCGAG...................................................................	21	2	35.00	1.00	3.00	0.00	31.00
...............................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................	21	2	31.50	2.50	0.00	0.00	29.00
...............................................................................................TCAGGTACCTGAAGTAGCTCGC..................................................................	22	2	31.00	1.00	4.00	0.00	26.00
...............................................................................................TCAGGTAACTGAAGTAGCGCGCG.................................................................	23	2	29.50	0.50	0.00	0.00	29.00
...............................................................................................TCATGTACCTGAAGTAGCGCGC..................................................................	22	2	29.50	0.50	0.00	0.00	29.00
...............................................................................................TCAGGTACCTGAAGTCGCGCGCG.................................................................	23	2	28.50	0.50	4.50	0.00	23.50
..................................................CGCGCTAATCAGTGACCGGG.................................................................................................................	20	2	27.50	0.00	3.50	0.00	24.00
...............................................................................................TCAGGTACCTGAAGTAGCACGCG.................................................................	23	2	27.00	1.00	0.50	0.00	25.50
................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................	22	2	26.00	0.00	1.50	0.00	24.50
.................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................	20	2	25.50	0.50	5.00	0.00	20.00
...............................................................................................TCAGGTACCTGCAGTAGCGCGCG.................................................................	23	2	25.50	2.00	17.00	0.00	6.50
...............................................................................................TCAGGGACCTGAAGTAGCGCG...................................................................	21	2	25.00	10.00	8.50	0.00	6.50
...............................................................................................TCAGGTACCTGAATTAGCGCG...................................................................	21	2	25.00	1.50	0.50	0.00	23.00
...............................................................................................TAAGGTACCTGAAGTAGCGCGC..................................................................	22	2	25.00	0.50	0.50	0.00	24.00
...............................................................................................TCAGGGACCTGAAGTAGCGCGCG.................................................................	23	2	24.50	2.50	11.50	0.00	10.50
...............................................................................................TCAGGTACCTGAAGTAGCGCTC..................................................................	22	2	24.00	1.50	1.50	0.00	21.00
...............................................................................................TCAGGTACATGAAGTAGCGCGC..................................................................	22	2	23.50	0.00	0.00	0.00	23.50
...............................................................................................TCAGGTACCTGAAGTAGCGTGCG.................................................................	23	2	23.50	0.50	0.50	0.00	22.50
...............................................................................................TCAGGTACCTTAAGTAGCGCGC..................................................................	22	2	23.00	2.00	0.00	0.00	21.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................	23	2	23.00	0.00	4.50	0.00	18.50
...............................................................................................TCAGGTACCCGAAGTAGCGCGCG.................................................................	23	2	23.00	0.00	2.50	0.00	20.50
...............................................................................................TCCGGTACCTGAAGTAGCGCGCG.................................................................	23	2	23.00	0.00	0.00	0.00	23.00
...............................................................................................TCAGGTACCTGAGGTAGCGCGCG.................................................................	23	2	23.00	1.00	2.00	0.00	20.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCCG.................................................................	23	2	22.50	1.50	1.50	0.00	19.50
...............................................................................................TCAGGTACCTGAAGTACCGCGCG.................................................................	23	2	22.00	0.00	0.00	0.00	22.00
...............................................................................................TCAGGTACCTGAAGTAGAGCGC..................................................................	22	2	21.50	0.00	2.50	0.00	19.00
...............................................................................................TCGGGTACCTGAAGTAGCGCGCG.................................................................	23	2	21.50	0.00	1.00	0.00	20.50
...............................................................................................TCAGGTACCTGAAGCAGCGCG...................................................................	21	2	21.50	8.00	2.00	0.00	11.50
...............................................................................................TCAGGTACCTGAAGTAGAGCG...................................................................	21	2	21.50	0.50	0.50	0.00	20.50
...............................................................................................TCAGTTACCTGAAGTAGCGCG...................................................................	21	2	20.00	2.00	1.00	0.00	17.00
...............................................................................................TCAGGTACCTGAAGTAGCGCACG.................................................................	23	2	19.50	0.00	2.50	0.00	17.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTT................................................................	24	2	19.00	0.00	1.00	0.00	18.00
...............................................................................................TCAGGTACCTGAAGTAGCCCGCG.................................................................	23	2	18.50	0.50	1.50	0.00	16.50
...............................................................................................TCAGGCACCTGAAGTAGCGCG...................................................................	21	2	18.00	5.50	2.00	0.00	10.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGTG.................................................................	23	2	17.50	0.00	1.00	0.00	16.50
...............................................................................................TCAGGTACCTGCAGTAGCGCG...................................................................	21	2	17.00	7.00	6.00	0.00	4.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGC..................................................................	22	2	16.50	1.50	4.00	0.00	11.00
...............................................................................................TCAGGTACCTGAAGTAACGCGCG.................................................................	23	2	16.50	1.00	1.50	0.00	14.00
...............................................................................................TCAGGTACCTGAAGTAGCGAGC..................................................................	22	2	16.50	0.00	2.00	0.00	14.50
...............................................................................................TCAGGTACCTGAAGTCGCGCG...................................................................	21	2	15.50	2.00	3.00	0.00	10.50
...............................................................................................CCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	15.50	0.00	1.00	0.00	14.50
...............................................................................................TCAGGGACCTGAAGTAGCGCGC..................................................................	22	2	15.00	4.00	8.50	0.00	2.50
...............................................................................................TCAGGTACCTGAACTAGCGCGCG.................................................................	23	2	15.00	1.50	1.50	0.00	12.00
...............................................................................................TCAGGTAACTGAAGTAGCGCG...................................................................	21	2	15.00	0.50	0.50	0.00	14.00
...............................................................................................TCAGGTACCTCAAGTAGCGCGCG.................................................................	23	2	15.00	1.00	0.00	0.00	14.00
...............................................................................................TCAGGTACCTGCAGTAGCGCGC..................................................................	22	2	14.50	4.00	8.00	0.00	2.50
...............................................................................................TCAGGTACCTGGAGTAGCGCGCG.................................................................	23	2	14.50	0.50	2.00	0.00	12.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGC..................................................................	22	2	14.00	3.00	3.50	0.00	7.50
...............................................................................................TCAGGTACCTGAAGTGGCGCGCG.................................................................	23	2	14.00	0.00	1.00	0.00	13.00
...............................................................................................TCAGGTACCTGAAGTAGTGCGCG.................................................................	23	2	13.50	0.00	0.00	0.00	13.50
..................................................CGCGCTAATCAGTGACCGGGGCTT.............................................................................................................	24	2	13.50	0.50	1.50	0.00	11.50
...............................................................................................TCAGGTACCTGAGGTAGCGCG...................................................................	21	2	13.50	1.00	1.50	0.00	11.00
...............................................................................................TCAAGTACCTGAAGTAGCGCGCG.................................................................	23	2	13.00	0.50	2.50	0.00	10.00
...............................................................................................TCAGGTGCCTGAAGTAGCGCGCG.................................................................	23	2	13.00	0.50	0.00	0.00	12.50
...............................................................................................TCAGGTACCTAAAGTAGCGCGCG.................................................................	23	2	12.50	1.00	1.00	0.00	10.50
...............................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................	21	2	12.50	3.50	1.00	0.00	8.00
..................................................CGCGCTAATCAGTGACCTGGGCT..............................................................................................................	23	2	12.50	0.00	0.00	0.00	12.50
..............................................................................................CTCAGGTACCTGAAGTAGCGCGCG.................................................................	24	2	12.50	0.00	0.00	0.00	12.50
...............................................................................................TCAGGTAACTGAAGTAGCGCGC..................................................................	22	2	12.50	0.00	0.50	0.00	12.00
...............................................................................................TCTGGTACCTGAAGTAGCGCGCG.................................................................	23	2	12.00	0.00	0.00	0.00	12.00

droEug1

TG--AT--GTTCT--CCC---TGA-AAAGGCTTAAATGTCTTCTACCTTGCGCGCTAATCAGAGACCGGGGCTGGTTTT-----T--ACATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACA--TCT-CCATATGTCTTCATC-------------------------GC

Size

Hit Count

Total Norm

droBia1

TG--AT--GTTCC--CCCGGCTTA-A--------AGAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--GTATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACAGACA--TCT-CCAC----ATCCACC-------------------------GC

Size

Hit Count

Total Norm

droTak1

CG--AT--GTTCC--CCCGGCTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACA--TCT-CCAA----C----CC-------------------------AT

Size

Hit Count

Total Norm

droEle1

T-------GTTC---CCCAACTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----C--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-TCAT----TT-------------------------------T

Size

Hit Count

Total Norm

droRho1

T-------GTTCC---CCAGCTGA----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TTCATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCT-TCAT----TTCCA-----------------------------

Size

Hit Count

Total Norm

droFic1

T-------GTTCC--CC-AGCTGGAAA-------AAAGTCTACTGCCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACA--TCT-CCAT----ATCCAGC-------------------------AC

Size

Hit Count

Total Norm

droKik1

CGGGATGTGTTCCTTCCCAGCTGA-A--------AAAGTCTCTTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----T--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATA--TCA-TCGC----CAACAAC-------------------------TC

Size

Hit Count

Total Norm

droAna3

A-------------------CTCT----------CCAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TG--CA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TC-------------CGCC-------------------------AT	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
...............................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................	21	2	14433.50	9599.50	1122.00	582.00	3130.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	11119.00	4698.00	3721.50	1272.50	1427.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	8650.50	3476.00	3770.50	1176.50	227.50
...............................................................................................TCAGGTACCTGAAGTAGCGC....................................................................	20	2	2821.00	1978.00	326.00	164.50	352.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................	22	2	1007.50	762.50	131.00	77.00	37.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................	24	2	968.00	170.00	766.50	26.50	5.00
...............................................................................................TCAGGTACCTGAAGTAGCG.....................................................................	19	2	518.50	466.00	13.50	27.00	12.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................	22	2	399.00	218.50	34.50	6.50	139.50
..................................................CGCGCTAATCAGTGACCGGGGCT..............................................................................................................	23	2	349.50	134.00	189.00	25.50	1.00
...............................................................................................TCAGGTACCTGAAGTATCGCG...................................................................	21	2	176.50	113.50	27.50	2.50	33.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................	24	2	157.50	27.50	114.50	3.00	12.50
...............................................................................................TCAGGTACCTGAAGTATCGCGC..................................................................	22	2	157.00	55.50	71.00	3.50	27.00
...............................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................	21	2	144.50	118.00	9.50	2.00	15.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................	23	2	144.00	78.00	39.50	19.50	7.00
...............................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................	21	2	127.50	102.50	9.00	1.50	14.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................	25	2	107.00	24.50	80.00	2.00	0.50
...............................................................................................TCAGGTACCTGAAGTATCGCGCG.................................................................	23	2	106.50	35.50	65.50	3.50	2.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................	23	2	106.00	83.50	10.50	12.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGC..................................................................	22	2	103.50	70.50	20.50	11.00	1.50
...............................................................................................TCAGGGACCTGAAGTAGCGCG...................................................................	21	2	95.00	17.00	2.00	14.50	61.50
...............................................................................................TCAGGTACCTGAAGTAGCGCTC..................................................................	22	2	94.50	48.00	37.00	2.50	7.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGCG.................................................................	23	2	93.50	46.50	35.50	11.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCTCGC..................................................................	22	2	91.50	29.50	42.00	1.50	18.50
...............................................................................................TCAGGTACCTGAAGTAGCTCG...................................................................	21	2	90.00	46.00	10.00	2.00	32.00
...............................................................................................TCAGGTACCTGAAGTGGCGCG...................................................................	21	2	90.00	71.00	11.50	5.00	2.50
...............................................................................................TCAGGTACCTGAAGTAGCGCTCG.................................................................	23	2	83.50	41.00	36.50	3.00	3.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................	23	2	81.00	35.50	20.50	7.00	18.00
...............................................................................................TCAGGTACCTGCAGTAGCGCG...................................................................	21	2	72.50	31.50	0.50	4.00	36.50
...............................................................................................TCAGGGACCTGAAGTAGCGCGC..................................................................	22	2	72.00	7.00	6.00	38.00	21.00
...............................................................................................TCAGGTACCTGAAGTAGCGCAC..................................................................	22	2	71.50	41.00	26.50	1.00	3.00
...............................................................................................TCAGGTACCTGAAGTAGCGCACG.................................................................	23	2	68.50	43.50	22.50	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCTCGCG.................................................................	23	2	65.00	17.50	43.50	2.50	1.50
...............................................................................................TCAGGTACCTGAAGTAGCGAG...................................................................	21	2	63.50	49.50	9.00	0.50	4.50
...............................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................	21	2	57.50	37.00	2.50	1.50	16.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGAG.................................................................	23	2	57.00	22.50	32.00	2.00	0.50
...............................................................................................TCAGGGACCTGAAGTAGCGCGCG.................................................................	23	2	53.00	6.00	13.00	29.50	4.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTT................................................................	24	2	50.00	18.00	29.50	2.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGAGCG.................................................................	23	2	49.50	14.00	32.50	2.50	0.50
..................................................CGCGCTAATCAGTGACCGGGGC...............................................................................................................	22	2	49.50	5.50	41.00	1.00	2.00
................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................	22	2	49.00	10.50	33.00	5.00	0.50
...............................................................................................TCAGGTACCTGACGTAGCGCG...................................................................	21	2	49.00	30.50	0.00	4.50	14.00
...............................................................................................TAAGGTACCTGAAGTAGCGCG...................................................................	21	2	47.50	41.50	3.50	2.00	0.50
...............................................................................................TCAGGCACCTGAAGTAGCGCG...................................................................	21	2	46.00	14.00	1.50	10.00	20.50
................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................	21	2	44.50	15.50	20.00	6.00	3.00
...............................................................................................TCAGGTACCTGGAGTAGCGCG...................................................................	21	2	44.00	31.50	1.50	2.50	8.50
...............................................................................................TCAGGTACCTGTAGTAGCGCG...................................................................	21	2	41.50	35.50	0.00	0.50	5.50
...............................................................................................TCAGGTACCTTAAGTAGCGCG...................................................................	21	2	40.50	16.50	4.00	0.50	19.50
...............................................................................................TCAGGTACCTGAAGTAGCGAGC..................................................................	22	2	40.50	16.00	21.00	2.00	1.50
...............................................................................................TCAGGTACCTGAAGCAGCGCG...................................................................	21	2	38.50	14.00	2.50	4.50	17.50
...............................................................................................TCAGGTACCTGAAGCAGCGCGC..................................................................	22	2	38.00	6.00	7.00	12.50	12.50
..................................................CGCGCTAATCAGTGACCGGGG................................................................................................................	21	2	38.00	10.50	21.50	3.50	2.50
...............................................................................................TCAGGCACCTGAAGTAGCGCGC..................................................................	22	2	38.00	9.00	4.50	20.00	4.50
...............................................................................................TCAGGTACCTGAAGTCGCGCG...................................................................	21	2	38.00	27.00	0.50	0.50	10.00
.................................................................................................AGGTACCTGAAGTAGCGCG...................................................................	19	2	38.00	9.50	1.50	6.00	21.00
...............................................................................................TCAGGTACCTGAAGTGGCGC....................................................................	20	2	37.50	31.50	5.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGTTT................................................................	24	2	37.50	23.50	11.00	2.00	1.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCC..................................................................	22	2	36.50	19.00	7.50	2.50	7.50
.................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................	20	2	35.50	8.50	9.00	9.50	8.50
...............................................................................................TCAGGTACCTGAAGTATCGC....................................................................	20	2	34.50	23.00	4.50	0.00	7.00
...............................................................................................TAAGGTACCTGAAGTAGCGCGC..................................................................	22	2	34.50	16.50	15.50	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGAGCG...................................................................	21	2	34.00	25.50	2.50	1.00	5.00
...............................................................................................TCATGTACCTGAAGTAGCGCGC..................................................................	22	2	32.50	7.00	22.00	0.50	3.00
.................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................	21	2	32.50	4.50	18.00	8.50	1.50
...............................................................................................TCAGGTACCTGCAGTAGCGCGC..................................................................	22	2	32.00	15.00	1.00	5.50	10.50
...............................................................................................TCAGGTACCTAAAGTAGCGCG...................................................................	21	2	31.50	28.00	1.00	0.50	2.00
...............................................................................................TCATGTACCTGAAGTAGCGCG...................................................................	21	2	30.50	15.50	6.00	0.50	8.50
...............................................................................................TCAGGTACATGAAGTAGCGCG...................................................................	21	2	30.00	19.50	3.50	2.50	4.50
...............................................................................................TCAGGTACCTGGAGTAGCGCGC..................................................................	22	2	29.50	19.00	3.50	3.00	4.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCCG.................................................................	23	2	29.00	14.00	9.50	4.50	1.00
...............................................................................................TCAGGTACCTGAATTAGCGCG...................................................................	21	2	29.00	16.00	0.50	0.50	12.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................	24	2	28.50	4.00	22.50	2.00	0.00
...............................................................................................TCATGTACCTGAAGTAGCGCGCG.................................................................	23	2	28.50	8.50	17.00	2.00	1.00
...............................................................................................TCAGGTACCTGAACTAGCGCG...................................................................	21	2	27.00	14.50	0.50	0.50	11.50
...............................................................................................TCAGGTACCTTAAGTAGCGCGC..................................................................	22	2	27.00	7.50	12.00	1.50	6.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................	26	2	26.50	4.00	22.50	0.00	0.00
...............................................................................................TCAGGTACCTCAAGTAGCGCG...................................................................	21	2	26.00	12.50	0.50	2.50	10.50
...............................................................................................TAAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	25.50	12.00	10.50	2.50	0.50
...............................................................................................TCAGGTACCTGAGGTAGCGCG...................................................................	21	2	25.00	16.50	0.00	1.00	7.50
...............................................................................................TCAGGTACCTGCAGTAGCGCGCG.................................................................	23	2	25.00	15.50	4.00	4.50	1.00
...............................................................................................TCAGGTACCTGAAGTACCGCGC..................................................................	22	2	25.00	7.50	3.00	9.50	5.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGCG.................................................................	23	2	24.50	5.00	3.00	16.00	0.50
...............................................................................................TCAGTTACCTGAAGTAGCGCG...................................................................	21	2	24.50	17.00	1.50	0.50	5.50
...............................................................................................TCAGGTACCTGAAGTAGCACGC..................................................................	22	2	23.50	5.00	8.50	3.50	6.50
...............................................................................................TCAGGTACCTGACGTAGCGCGC..................................................................	22	2	22.50	12.00	1.50	2.00	7.00
...............................................................................................TCAGGTACCTGAAGTAGCCCG...................................................................	21	2	22.50	3.50	0.00	3.00	16.00
...............................................................................................TCAGGTACCTAAAGTAGCGCGC..................................................................	22	2	22.00	17.50	1.50	0.50	2.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................	23	2	22.00	15.00	5.50	0.50	1.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................	23	2	21.50	9.00	4.50	3.50	4.50
...............................................................................................TCAGGTACCTTAAGTAGCGCGCG.................................................................	23	2	21.50	6.50	10.00	1.00	4.00
...............................................................................................TCAGGTACCTGAAGTAGCACG...................................................................	21	2	21.50	13.00	1.00	1.50	6.00
...............................................................................................TCAGGTACCTGACGTAGCGCGCG.................................................................	23	2	21.00	13.50	0.50	4.00	3.00
...............................................................................................TCAGGTACCTGAAGTAGAGCGCG.................................................................	23	2	21.00	9.00	10.00	1.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGC......................................................................	18	2	21.00	0.50	13.00	7.50	0.00
...............................................................................................TCAGGTACCTGATGTAGCGCG...................................................................	21	2	20.50	17.00	0.00	2.00	1.50
...............................................................................................TCAGGTACCTGAAGGAGCGCG...................................................................	21	2	20.00	2.00	0.00	1.50	16.50
...............................................................................................TCAGGTACCTGAAGTAGCGT....................................................................	20	2	20.00	17.00	1.00	1.50	0.50
...............................................................................................TCAGGTACCTGAAGGAGCGCGC..................................................................	22	2	20.00	2.50	3.00	8.00	6.50
...............................................................................................TCAGGTACCTGAAGTAGAGCGC..................................................................	22	2	20.00	8.00	6.50	2.00	3.50
...............................................................................................TCAGGGACCTGAAGTAGCGC....................................................................	20	2	19.50	3.00	0.00	7.00	9.50
...............................................................................................TCAGGTACCTGAATTAGCGCGCG.................................................................	23	2	19.50	9.50	4.00	3.00	3.00
...............................................................................................TCAGGTACATGAAGTAGCGCGC..................................................................	22	2	19.00	4.50	8.50	4.50	1.50

droBip1

CC--AT--GTAC---------TCC----------AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTT-----TG--CA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATA--TCCGCCAT----ATCCGAC-------------------------AT

Size

Hit Count

Total Norm

dp4

CC--AC--CTTC---------TTG----------AAAGTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGGTTTT-----TT-CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAACATCT---GT------------------------------------GT	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
...............................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................	21	2	5613.00	3612.00	1344.00	651.50	5.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	4745.00	3852.50	70.50	819.50	2.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	4691.00	3473.00	368.00	833.50	16.50
...............................................................................................TCAGGTACCTGAAGTAGCGC....................................................................	20	2	963.00	595.50	193.00	173.50	1.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................	22	2	629.50	487.00	56.50	84.50	1.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................	24	2	409.50	345.50	2.00	61.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................	22	2	205.50	46.50	156.00	3.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCG.....................................................................	19	2	140.00	38.00	14.00	88.00	0.00
..................................................CGCGCTAATCAGAGACCGGGGCT..............................................................................................................	23	2	107.50	68.00	8.50	29.00	2.00
.................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................	21	2	87.00	72.50	0.50	14.00	0.00
.................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................	20	2	72.50	60.50	1.50	10.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................	25	2	51.00	45.00	0.50	5.50	0.00
.................................................................................................AGGTACCTGAAGTAGCGCG...................................................................	19	2	50.50	32.00	16.00	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................	23	2	47.00	42.00	0.50	4.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................	23	2	45.00	39.50	1.00	4.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................	24	2	36.00	29.50	4.50	2.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................	23	2	31.00	25.50	0.50	5.00	0.00
................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................	21	2	31.00	26.50	1.50	2.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................	23	2	28.00	20.00	6.00	2.00	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGCG...................................................................	21	2	22.50	0.50	16.50	5.50	0.00
................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................	22	2	22.00	19.00	0.00	3.00	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGCGC..................................................................	22	2	19.00	0.00	3.50	15.50	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGCG.................................................................	23	2	16.50	10.00	0.00	6.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTT................................................................	24	2	15.50	14.00	0.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................	24	2	15.00	14.50	0.00	0.50	0.00
...............................................................................................TCAGGTACCTGCAGTAGCGCG...................................................................	21	2	14.00	1.50	9.50	3.00	0.00
..................................................CGCGCTAATCAGAGACCGGG.................................................................................................................	20	2	13.50	9.50	0.50	3.50	0.00
..................................................CGCGCTAATCAGAGACCGGGG................................................................................................................	21	2	13.00	7.50	2.50	3.00	0.00
..................................................CGCGCTAATCAGAGACCGGGGC...............................................................................................................	22	2	12.50	6.50	2.00	3.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGTTT................................................................	24	2	11.50	11.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCG...................................................................	21	2	11.00	4.50	4.50	2.00	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCG...................................................................	21	2	10.00	2.50	4.50	3.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................	24	2	10.00	6.50	0.50	3.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCC..................................................................	22	2	9.50	9.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGACGTAGCGCG...................................................................	21	2	9.50	3.00	5.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCG...................................................................	21	2	9.50	5.00	1.00	3.50	0.00
...............................................................................................TCAGGTACCTGGAGTAGCGCGC..................................................................	22	2	9.50	5.00	1.00	3.50	0.00
...............................................................................................CCAGGTACCTGAAGTAGCGCG...................................................................	21	2	9.00	7.00	1.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................	21	2	8.50	3.50	3.00	2.00	0.00
...............................................................................................TCAGGTACCTGAGGTAGCGCG...................................................................	21	2	8.50	5.50	2.00	1.00	0.00
...............................................................................................TCAGGTACATGAAGTAGCGCG...................................................................	21	2	8.50	1.50	5.50	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCACG...................................................................	21	2	8.00	3.00	3.00	2.00	0.00
...............................................................................................TCGGGTACCTGAAGTAGCGCGC..................................................................	22	2	8.00	2.50	1.00	4.50	0.00
.................................................................................................AGGTACCTGAAGTAGCGCGCGT................................................................	22	2	8.00	6.50	0.00	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGC..................................................................	22	2	8.00	7.50	0.00	0.50	0.00
................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................	20	2	8.00	6.00	1.00	1.00	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGCG.................................................................	23	2	8.00	4.50	0.00	3.50	0.00
..................................................CGCGCTAATCAGAGACCGGGGT...............................................................................................................	22	2	7.50	6.50	0.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTCGCGCG...................................................................	21	2	7.50	2.50	5.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCCG.................................................................	23	2	7.50	7.00	0.00	0.50	0.00
...............................................................................................TCAGGTACCTGGAGTAGCGCG...................................................................	21	2	7.50	1.00	5.00	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGT....................................................................	20	2	7.50	4.00	0.00	3.50	0.00
...............................................................................................TCAGGTACCTGAAGTACCGCGCG.................................................................	23	2	7.00	5.00	0.50	1.50	0.00
...............................................................................................TCAGGTACCTGTAGTAGCGCG...................................................................	21	2	7.00	1.00	6.00	0.00	0.00
...............................................................................................TAAGGTACCTGAAGTAGCGCG...................................................................	21	2	7.00	1.00	4.50	1.50	0.00
...............................................................................................TCAGTTACCTGAAGTAGCGCG...................................................................	21	2	7.00	5.00	1.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCCCGC..................................................................	22	2	6.50	6.50	0.00	0.00	0.00
...............................................................................................TCAGGAACCTGAAGTAGCGCG...................................................................	21	2	6.50	0.50	4.50	1.50	0.00
...............................................................................................TCAGGTACCTGAGGTAGCGCGCG.................................................................	23	2	6.50	6.00	0.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................	21	2	6.50	5.50	0.50	0.50	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGC..................................................................	22	2	6.50	2.00	1.00	3.50	0.00
...............................................................................................TCAGGTACCTGAAGTACCGCGC..................................................................	22	2	6.00	4.00	0.00	2.00	0.00
...............................................................................................TCAGGTACCCGAAGTAGCGCGC..................................................................	22	2	6.00	4.00	0.00	2.00	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGC..................................................................	22	2	6.00	2.50	1.00	2.50	0.00
.................................................................................................AGGTACCTGAAGTAGCGC....................................................................	18	2	6.00	3.50	1.50	1.00	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGC....................................................................	20	2	6.00	0.00	2.50	3.50	0.00
...............................................................................................TCAGGTACCTGAAGGAGCGCG...................................................................	21	2	6.00	1.00	4.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTCGCGCGCG.................................................................	23	2	6.00	4.50	0.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCCCG...................................................................	21	2	6.00	4.50	0.50	1.00	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGCGCG.................................................................	23	2	6.00	0.00	0.50	5.50	0.00
...............................................................................................TCAGGTACCTGACGTAGCGCGCG.................................................................	23	2	6.00	2.00	0.00	4.00	0.00
...............................................................................................TCAGGTACCTGCAGTAGCGCGC..................................................................	22	2	5.50	3.00	1.00	1.50	0.00
...............................................................................................TCAGGTACCCGAAGTAGCGCGCG.................................................................	23	2	5.50	4.00	0.00	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCACGCG.................................................................	23	2	5.50	4.00	0.00	1.50	0.00
.................................................................................................AGGTACCTGAAGTAGCGCGT..................................................................	20	2	5.50	4.50	0.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTACCGCG...................................................................	21	2	5.50	4.00	0.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................	23	2	5.50	5.00	0.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGCG.................................................................	23	2	5.50	3.00	0.00	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGAGCG...................................................................	21	2	5.00	1.50	2.50	1.00	0.00
...............................................................................................TCAGGTACCTGAATTAGCGCGCG.................................................................	23	2	5.00	2.50	0.50	2.00	0.00
...............................................................................................TCAGGTACCTGAAGAAGCGCGC..................................................................	22	2	5.00	2.50	0.00	2.50	0.00
...............................................................................................CCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	5.00	2.50	1.00	1.50	0.00
...............................................................................................TCGGGTACCTGAAGTAGCGCGCG.................................................................	23	2	4.50	3.00	0.00	1.50	0.00
...............................................................................................TCAGGTACCTGAATTAGCGCG...................................................................	21	2	4.50	4.00	0.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................	26	2	4.50	4.50	0.00	0.00	0.00
...............................................................................................CCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	4.50	3.50	0.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTATCGCGC..................................................................	22	2	4.50	4.00	0.50	0.00	0.00
...............................................................................................TCGGGTACCTGAAGTAGCGCG...................................................................	21	2	4.50	3.00	1.50	0.00	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGCGA..................................................................	22	2	4.50	0.00	4.50	0.00	0.00
...............................................................................................TCAGGTACCTGAGGTAGCGCGC..................................................................	22	2	4.50	2.00	0.00	2.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGTGCGCG.................................................................	23	2	4.50	3.50	0.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGTG...................................................................	21	2	4.50	2.00	2.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCACG.................................................................	23	2	4.50	4.00	0.00	0.50	0.00
...............................................................................................TCAGGTAACTGAAGTAGCGCGC..................................................................	22	2	4.50	2.00	0.50	2.00	0.00
...............................................................................................TCAGCTACCTGAAGTAGCGCG...................................................................	21	2	4.50	2.50	1.00	1.00	0.00
...............................................................................................TCAxGTACCTGAAGTAGCGCG...................................................................	20	2	4.50	4.50	0.00	0.00	0.00
.................................................................................................AGGTACCTGAAGTAGCGCGCT.................................................................	21	2	4.00	4.00	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCAC..................................................................	22	2	4.00	2.50	0.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................	21	2	4.00	2.00	1.50	0.50	0.00
..............................................................................................CTCAGGTACCTGAAGTAGCGCG...................................................................	22	2	4.00	3.00	0.50	0.50	0.00
...............................................................................................TCAGGTGCCTGAAGTAGCGCGC..................................................................	22	2	4.00	2.50	0.00	1.50	0.00

droPer1

CC--AC--CTTC---------TTG----------AAAGTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGGTTTT-----TT-CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAACATCT---GT------------------------------------GT	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
...............................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................	21	2	5088.50	2719.00	914.00	477.00	959.00	19.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	4775.50	2028.50	273.50	727.00	1504.00	242.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	3146.50	1901.00	96.00	626.00	452.00	71.50
...............................................................................................TCAGGTACCTGAAGTAGCGC....................................................................	20	2	939.00	367.00	133.50	135.50	297.00	6.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................	22	2	733.50	535.00	32.00	57.00	109.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................	24	2	293.00	249.00	1.00	28.50	8.50	6.00
..................................................CGCGCTAATCAGAGACCGGGGCT..............................................................................................................	23	2	173.50	32.50	6.50	19.50	68.00	47.00
...............................................................................................TCAGGTACCTGAAGTAGCG.....................................................................	19	2	159.00	55.50	8.00	33.00	62.50	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGCGC..................................................................	22	2	79.50	5.00	2.00	5.00	64.00	3.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................	22	2	78.50	11.50	57.00	2.50	4.50	3.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................	23	2	71.50	58.50	1.50	2.00	9.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................	24	2	53.00	25.50	2.00	3.50	0.00	22.00
...............................................................................................TCAGGGACCTGAAGTAGCGCG...................................................................	21	2	51.00	9.50	8.00	2.00	31.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................	25	2	41.00	38.00	0.00	3.00	0.00	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGC..................................................................	22	2	37.00	3.00	0.50	6.50	26.00	1.00
...............................................................................................TCAGGGACCTGAAGTAGCGCGCG.................................................................	23	2	35.00	14.00	1.50	4.50	15.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGCG.................................................................	23	2	34.00	18.00	0.50	4.50	11.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................	23	2	33.50	9.00	1.00	6.50	12.00	5.00
...............................................................................................TCAGGCACCTGAAGTAGCGCG...................................................................	21	2	31.00	7.50	4.00	5.00	14.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................	23	2	28.00	10.50	0.00	9.50	8.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................	23	2	24.50	9.50	6.00	4.50	4.00	0.50
................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................	21	2	24.50	7.50	0.00	3.00	13.00	1.00
.................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................	20	2	22.50	1.50	2.50	2.50	15.50	0.50
.................................................................................................AGGTACCTGAAGTAGCGCG...................................................................	19	2	22.00	2.50	8.00	4.00	7.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGTTT................................................................	24	2	22.00	19.50	0.00	0.50	2.00	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGCG.................................................................	23	2	17.50	7.00	0.00	3.50	6.50	0.50
.................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................	21	2	17.00	0.50	0.50	8.00	8.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGC..................................................................	22	2	17.00	1.50	0.00	3.00	12.50	0.00
..................................................CGCGCTAATCAGAGACCGGG.................................................................................................................	20	2	16.50	5.00	1.00	3.50	7.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGC......................................................................	18	2	15.50	0.50	0.50	0.50	14.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCG...................................................................	21	2	15.50	8.00	0.50	1.00	6.00	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGC..................................................................	22	2	14.50	0.50	0.00	3.00	11.00	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGC....................................................................	20	2	14.00	0.50	2.00	1.50	10.00	0.00
...............................................................................................TCAGGTACCTGCAGTAGCGCG...................................................................	21	2	13.50	1.50	8.00	1.50	2.50	0.00
...............................................................................................TCAGGTACCTGAAGGAGCGCGC..................................................................	22	2	11.50	2.00	1.00	1.00	7.50	0.00
..................................................CGCGCTAATCAGAGACCGGGGC...............................................................................................................	22	2	11.50	0.50	2.00	1.00	0.50	7.50
...............................................................................................TCAGGAACCTGAAGTAGCGCG...................................................................	21	2	11.00	3.50	2.00	1.50	4.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTT................................................................	24	2	11.00	8.50	0.00	0.50	1.50	0.50
...............................................................................................TCAGGAACCTGAAGTAGCGCGC..................................................................	22	2	10.50	1.00	0.50	3.50	5.50	0.00
...............................................................................................TCAGGTACCTGACGTAGCGCG...................................................................	21	2	10.50	0.50	3.50	3.00	3.50	0.00
...............................................................................................TCAGGTACCTGAGGTAGCGCGC..................................................................	22	2	9.50	3.00	0.50	1.50	4.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................	24	2	9.50	3.00	0.50	2.00	0.50	3.50
...............................................................................................TCAGGTACCTGCAGTAGCGCGC..................................................................	22	2	9.00	1.00	2.00	0.50	5.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................	21	2	9.00	2.50	3.50	1.50	1.50	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGC....................................................................	20	2	9.00	0.50	0.00	1.00	7.50	0.00
...............................................................................................TCAGGTACCTGAAGGAGCGCG...................................................................	21	2	9.00	2.00	1.00	0.50	5.50	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCG...................................................................	21	2	9.00	1.00	3.50	1.00	3.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................	24	2	8.50	5.50	0.00	0.50	2.50	0.00
................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................	22	2	8.50	1.00	1.00	2.00	4.00	0.50
...............................................................................................TCAGGTACCTGAAGTATCGCGC..................................................................	22	2	8.00	2.00	0.50	1.50	4.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................	23	2	8.00	4.00	0.50	1.00	2.50	0.00
...............................................................................................TCAGGTACATGAAGTAGCGCGC..................................................................	22	2	7.50	2.00	1.50	0.00	4.00	0.00
...............................................................................................TCAGGTACCTGCAGTAGCGCGCG.................................................................	23	2	7.50	0.50	1.50	3.00	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCTT..................................................................	22	2	7.50	6.00	0.00	0.50	1.00	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGCGT..................................................................	22	2	7.50	0.50	0.50	0.50	6.00	0.00
...............................................................................................TCAGGTACCTGAAGTACCGCGC..................................................................	22	2	7.00	1.00	0.00	2.00	3.50	0.50
...............................................................................................TCAGGTACCTGAGGTAGCGCG...................................................................	21	2	7.00	3.00	1.00	0.00	3.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCTCGC..................................................................	22	2	7.00	3.50	0.00	0.50	3.00	0.00
...............................................................................................TCATGTACCTGAAGTAGCGCG...................................................................	21	2	7.00	4.00	0.00	0.00	0.50	2.50
...............................................................................................TCAGGTACCTGGAGTAGCGCG...................................................................	21	2	7.00	2.50	1.00	1.00	2.50	0.00
...............................................................................................TCAGGTACCTGGAGTAGCGCGC..................................................................	22	2	7.00	0.00	1.00	0.50	5.50	0.00
.................................................................................................AGGTACCTGAAGTAGCGC....................................................................	18	2	6.50	0.50	1.00	1.50	3.50	0.00
...............................................................................................TCAGGAACCTGAAGTAGCGCGCG.................................................................	23	2	6.50	2.50	0.00	2.00	2.00	0.00
...............................................................................................TCAGGTACCTGAATTAGCGCGCG.................................................................	23	2	6.50	3.50	0.00	0.50	1.00	1.50
................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................	20	2	6.50	1.00	1.50	1.50	2.50	0.00
...............................................................................................TCAGTTACCTGAAGTAGCGCGC..................................................................	22	2	6.50	1.00	0.00	0.50	0.50	4.50
...............................................................................................CCAGGTACCTGAAGTAGCGCG...................................................................	21	2	6.00	2.50	1.50	1.00	1.00	0.00
...............................................................................................TCAGGGACCTGATGTAGCGCGC..................................................................	22	2	6.00	0.00	0.50	0.00	5.50	0.00
..................................................CGCGCTAATCAGAGACCGGGG................................................................................................................	21	2	6.00	0.50	0.00	1.50	4.00	0.00
...............................................................................................CCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	6.00	3.50	0.50	0.50	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTACCGCG...................................................................	21	2	6.00	1.50	1.50	0.50	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTACCGCGCG.................................................................	23	2	5.50	1.50	0.00	1.00	3.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................	21	2	5.50	2.50	0.00	1.00	2.00	0.00
...............................................................................................TCAGGTACCTGAAGTATCGCGCG.................................................................	23	2	5.50	2.50	0.50	2.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................	21	2	5.50	1.50	0.50	0.50	3.00	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGT..................................................................	22	2	5.50	1.50	0.50	0.50	3.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCTCG...................................................................	21	2	5.50	2.00	0.50	0.50	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCACGCG.................................................................	23	2	5.50	2.00	0.00	2.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................	25	2	5.50	5.00	0.00	0.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGTG...................................................................	21	2	5.50	1.50	2.00	0.50	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGT....................................................................	20	2	5.50	1.50	0.00	2.00	2.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGTGCGC..................................................................	22	2	5.50	1.00	0.00	1.00	3.50	0.00
...............................................................................................TCAGGGACCTGATGTAGCGCG...................................................................	21	2	5.50	0.00	0.00	0.50	5.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCACG...................................................................	21	2	5.00	1.50	1.50	1.00	1.00	0.00
...............................................................................................TCAGGTACCCGAAGTAGCGCGC..................................................................	22	2	5.00	1.50	0.50	1.00	2.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCAC..................................................................	22	2	5.00	1.50	0.50	0.00	1.50	1.50
...............................................................................................TCAGGTACCTGAAGTAGAGCG...................................................................	21	2	5.00	1.50	3.00	0.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCC..................................................................	22	2	5.00	1.50	0.00	1.50	2.00	0.00
...............................................................................................TCATGTACCTGAAGTAGCGCGC..................................................................	22	2	5.00	2.00	0.00	0.00	0.00	3.00
...............................................................................................TCGGGTACCTGAAGTAGCGCG...................................................................	21	2	5.00	1.00	1.00	1.50	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGAGCGC..................................................................	22	2	5.00	0.50	0.50	2.50	1.00	0.50
.................................................................................................AGGTACCTGAAGTAGCGCGT..................................................................	20	2	5.00	0.50	0.50	1.00	3.00	0.00
...............................................................................................TCAGGTAACTGAAGTAGCGCG...................................................................	21	2	5.00	0.00	2.00	1.00	2.00	0.00
...............................................................................................TCAGGTACCTGACGTAGCGCGC..................................................................	22	2	5.00	0.00	0.50	2.00	2.50	0.00
...............................................................................................TCAGGTACATGAAGTAGCGCG...................................................................	21	2	5.00	0.50	2.50	1.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCACG.................................................................	23	2	5.00	3.00	0.00	1.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGTGCG.................................................................	23	2	5.00	2.50	0.00	1.00	1.50	0.00
...............................................................................................TAAGGTACCTGAAGTAGCGCGC..................................................................	22	2	5.00	0.50	0.00	0.00	4.50	0.00
..................................................CGCGCTAATCAGAGACCGGGGCC..............................................................................................................	23	2	4.50	0.00	0.00	0.00	0.00	4.50
..................................................CGCGCTAATCAGAGACCG...................................................................................................................	18	2	4.50	0.00	0.00	0.00	3.00	1.50
...............................................................................................TCAGGTACCTGAAGTCGCGCG...................................................................	21	2	4.50	0.50	2.50	1.00	0.50	0.00

droWil1

-------------------------------------GTCTCTTACCTTGCGCGCTAATCAGTGACCAGGGCTGAGTAATTTTATT-CAATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTT-TTAGACCAAGA--TT-------------CATCGCACGACGACGGCGACAACGACGACAC	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
...............................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................	21	2	23759.50	1402.00	21616.50	710.00	31.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	15599.00	930.50	12979.00	1254.00	435.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	9873.50	1335.50	4368.50	3886.00	283.50
..................................................CGCGCTAATCAGTGACCAGGGCT..............................................................................................................	23	2	1904.50	96.50	119.00	261.00	1428.00
...............................................................................................TCAGGTACCTGAAGTAGCGC....................................................................	20	2	1881.00	307.50	1399.00	166.00	8.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................	22	2	769.50	9.00	746.00	14.50	0.00
..................................................CGCGCTAATCAGTGACCAGGGC...............................................................................................................	22	2	651.50	16.50	75.00	209.50	350.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................	24	2	569.00	51.00	268.50	224.00	25.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................	24	2	461.50	14.00	400.50	39.50	7.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................	22	2	290.50	38.50	233.50	18.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................	23	2	256.00	5.00	229.00	22.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGCG.................................................................	23	2	178.00	44.00	4.00	117.00	13.00
.................................................................................................AGGTACCTGAAGTAGCGCG...................................................................	19	2	172.00	7.50	160.50	4.00	0.00
..................................................CGCGCTAATCAGTGACCAGGGCC..............................................................................................................	23	2	170.50	0.00	0.00	0.50	170.00
...............................................................................................TCAGGTACCTGAAGTAGCG.....................................................................	19	2	124.50	19.50	96.50	8.50	0.00
.................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................	20	2	111.00	9.00	94.50	7.50	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGC..................................................................	22	2	77.00	22.00	8.00	45.00	2.00
.................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................	21	2	64.50	10.00	29.00	24.50	1.00
...............................................................................................TCAGGTACCTGAAGTATCGCG...................................................................	21	2	61.50	1.50	60.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCG...................................................................	21	2	59.50	1.00	56.00	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCG...................................................................	21	2	59.00	11.50	13.00	34.50	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGC..................................................................	22	2	58.00	1.50	52.50	4.00	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCG...................................................................	21	2	57.50	2.50	53.50	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................	23	2	55.00	10.50	19.50	13.00	12.00
...............................................................................................TCAGGTACCTGAAGTAGCTCG...................................................................	21	2	50.00	2.00	48.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGAG...................................................................	21	2	48.00	0.50	43.50	4.00	0.00
...............................................................................................TCATGTACCTGAAGTAGCGCG...................................................................	21	2	45.50	0.00	45.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................	23	2	44.50	2.50	37.50	4.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................	21	2	44.00	0.50	43.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGAG.................................................................	23	2	42.50	1.50	11.00	30.00	0.00
...............................................................................................TAAGGTACCTGAAGTAGCGCG...................................................................	21	2	42.00	0.00	38.00	4.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................	21	2	41.00	5.00	33.50	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTATCGCGC..................................................................	22	2	40.50	1.50	36.00	2.00	1.00
...............................................................................................CCAGGTACCTGAAGTAGCGCG...................................................................	21	2	40.00	1.50	35.00	3.50	0.00
..................................................CGCGCTAATCAGTGACCAGGG................................................................................................................	21	2	40.00	3.00	15.00	19.50	2.50
...............................................................................................TCAGGTACCTGAAGTAGCTCGC..................................................................	22	2	39.50	1.00	37.00	1.50	0.00
...............................................................................................TCAGGTACATGAAGTAGCGCG...................................................................	21	2	37.50	1.50	32.50	3.50	0.00
...............................................................................................TCAGGTACCTGAAGAAGCGCG...................................................................	21	2	36.50	0.00	34.00	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................	24	2	35.50	0.00	35.00	0.50	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGC..................................................................	22	2	35.00	1.50	30.00	3.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCTC..................................................................	22	2	35.00	1.50	30.00	2.50	1.00
...............................................................................................TCAGGTACCTGAAGTAGCACG...................................................................	21	2	34.50	1.00	28.50	5.00	0.00
...............................................................................................TCAGTTACCTGAAGTAGCGCG...................................................................	21	2	34.00	3.50	29.50	0.00	1.00
...............................................................................................TCAGGTACCTTAAGTAGCGCG...................................................................	21	2	34.00	0.00	33.00	1.00	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGCG.................................................................	23	2	31.50	3.50	17.00	10.00	1.00
...............................................................................................TCAGGTACCTGAGGTAGCGCG...................................................................	21	2	31.50	2.00	26.00	3.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGC......................................................................	18	2	31.00	1.00	25.00	5.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................	21	2	31.00	1.50	28.50	0.50	0.50
...............................................................................................TCAGGTACCTGAAGAAGCGCGC..................................................................	22	2	30.50	1.00	21.00	7.50	1.00
..................................................CGCGCTAATCAGTGACCAGGGCG..............................................................................................................	23	2	30.50	0.00	0.00	0.50	30.00
...............................................................................................TCATGTACCTGAAGTAGCGCGC..................................................................	22	2	30.00	0.00	25.00	1.50	3.50
...............................................................................................TCAGGTACATGAAGTAGCGCGC..................................................................	22	2	29.00	0.00	22.00	6.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGAGCG.................................................................	23	2	28.50	0.00	11.50	17.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGAGCGCG.................................................................	23	2	28.00	0.50	12.50	15.00	0.00
...............................................................................................TCAGGTACCTGAAGTACCGCGC..................................................................	22	2	28.00	3.50	20.50	3.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGAGCG...................................................................	21	2	27.50	0.50	22.00	5.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCACGC..................................................................	22	2	27.00	0.50	19.50	7.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGAGCGC..................................................................	22	2	27.00	0.50	20.50	6.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGTG...................................................................	21	2	26.00	0.50	24.00	1.50	0.00
...............................................................................................TCAGGTACCCGAAGTAGCGCG...................................................................	21	2	25.50	2.00	21.50	1.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCACG.................................................................	23	2	25.50	0.50	10.00	15.00	0.00
...............................................................................................TCGGGTACCTGAAGTAGCGCG...................................................................	21	2	25.50	3.00	21.50	1.00	0.00
...............................................................................................TCAGTTACCTGAAGTAGCGCGC..................................................................	22	2	25.50	1.00	20.50	2.00	2.00
...............................................................................................TCAGGTACCTGAAGTAGCGCAC..................................................................	22	2	25.00	0.50	20.00	3.50	1.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCC..................................................................	22	2	25.00	2.50	19.50	3.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGAGC..................................................................	22	2	24.50	0.50	18.50	5.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCCCG...................................................................	21	2	24.50	1.50	20.50	2.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGTGCG...................................................................	21	2	24.00	0.50	23.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGCG.................................................................	23	2	23.50	2.50	10.50	10.50	0.00
...............................................................................................TCAGGTACCCGAAGTAGCGCGC..................................................................	22	2	23.50	0.50	17.50	4.00	1.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................	25	2	23.50	0.00	22.00	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................	24	2	23.50	4.00	8.50	6.00	5.00
...............................................................................................TCAGGTACCTGAAGGAGCGCGC..................................................................	22	2	23.00	0.50	20.50	1.50	0.50
...............................................................................................CCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	23.00	2.00	6.00	15.00	0.00
...............................................................................................TAAGGTACCTGAAGTAGCGCGC..................................................................	22	2	22.00	1.00	19.00	2.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCTCGCG.................................................................	23	2	21.50	1.00	13.50	6.50	0.50
...............................................................................................CCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	21.50	2.50	14.50	4.00	0.50
...............................................................................................TCAGGTACATGAAGTAGCGCGCG.................................................................	23	2	21.00	0.00	4.50	16.50	0.00
..................................................CGCGCTAATCAGTGACCAGGGCTC.............................................................................................................	24	2	21.00	0.00	0.50	0.50	20.00
...............................................................................................TCATGTACCTGAAGTAGCGCGCG.................................................................	23	2	20.50	1.00	9.50	5.00	5.00
...............................................................................................TCAGGTACCTGAAGAAGCGCGCG.................................................................	23	2	20.00	0.00	5.00	15.00	0.00
...............................................................................................TCAGGTAACTGAAGTAGCGCGCG.................................................................	23	2	20.00	0.00	0.50	19.50	0.00
...............................................................................................TCAGGTACCTGGAGTAGCGCG...................................................................	21	2	20.00	1.50	18.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................	25	2	19.50	3.50	5.50	10.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCACGCG.................................................................	23	2	19.50	1.50	6.00	12.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................	24	2	19.00	0.50	13.50	4.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCTCG.................................................................	23	2	19.00	1.00	10.00	6.50	1.50
...............................................................................................TCAGGTACCTGAAGTAGCCCGC..................................................................	22	2	18.50	1.50	13.50	3.50	0.00
...............................................................................................TCAGGTACCTGACGTAGCGCG...................................................................	21	2	18.50	2.00	16.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTATCGCGCG.................................................................	23	2	18.50	1.00	11.50	6.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGC....................................................................	20	2	18.00	6.50	1.00	10.50	0.00
...............................................................................................TCAGGAACCTGAAGTAGCGCG...................................................................	21	2	18.00	0.50	16.00	1.50	0.00
..............................................................................................CTCAGGTACCTGAAGTAGCGCG...................................................................	22	2	18.00	2.00	16.00	0.00	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGCG...................................................................	21	2	18.00	2.50	14.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGTG.................................................................	23	2	17.50	1.00	10.00	6.50	0.00
...............................................................................................TCAGGTACCTTAAGTAGCGCGC..................................................................	22	2	17.50	0.00	16.50	1.00	0.00
...............................................................................................TAAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	17.50	0.00	7.00	10.50	0.00
...............................................................................................TCAGGTACCTGAGGTAGCGCGC..................................................................	22	2	17.00	0.00	14.50	2.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCCCG.................................................................	23	2	17.00	6.50	6.50	3.50	0.50
...............................................................................................TCAGGTACCTGAAGTACCGCG...................................................................	21	2	17.00	1.00	15.50	0.50	0.00
...............................................................................................TCAGTTACCTGAAGTAGCGCGCG.................................................................	23	2	16.50	2.00	8.00	6.00	0.50

droVir3

C--------------------TGC----------GCCGTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGGTTTTGGTTATC---CCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGTATTCATCT-----------TAAGC-------------------------TT	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
...............................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	15725.50	12092.50	467.50	637.00	1981.50	547.00
...............................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................	21	2	14273.00	12609.00	259.50	1186.00	193.50	25.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	14136.00	12001.50	594.50	419.00	859.00	262.00
...............................................................................................TCAGGTACCTGAAGTAGCGC....................................................................	20	2	1626.00	1440.00	62.50	107.00	12.50	4.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................	24	2	604.50	471.00	25.00	21.50	54.00	33.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................	22	2	529.00	467.00	14.50	42.50	5.00	0.00
..................................................CGCGCTAATCAGTGACCGGGGCT..............................................................................................................	23	2	469.00	246.00	22.00	19.50	146.00	35.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................	22	2	175.00	124.00	1.00	45.00	5.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................	24	2	167.00	100.50	4.50	28.00	23.50	10.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................	23	2	154.00	130.00	4.50	13.00	6.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCG.....................................................................	19	2	130.50	110.00	14.00	5.00	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................	23	2	118.00	107.50	6.00	4.50	0.00	0.00
.................................................................................................AGGTACCTGAAGTAGCGCG...................................................................	19	2	99.00	87.00	2.00	10.00	0.00	0.00
.................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................	21	2	97.50	82.00	10.00	3.00	2.00	0.50
..................................................CGCGCTAATCAGTGACCGGGGCTC.............................................................................................................	24	2	93.50	3.50	0.50	0.00	69.50	20.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................	23	2	82.00	45.50	1.00	3.50	28.00	4.00
.................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................	20	2	81.00	68.00	4.50	6.50	2.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGCG.................................................................	23	2	61.50	43.50	14.00	0.00	0.50	3.50
...............................................................................................TCAGGGACCTGAAGTAGCGCGCG.................................................................	23	2	52.50	27.50	13.00	6.00	3.50	2.50
...............................................................................................TCAGGGACCTGAAGTAGCGCGC..................................................................	22	2	52.00	15.00	12.00	6.50	13.50	5.00
...............................................................................................TCAGGGACCTGAAGTAGCGCG...................................................................	21	2	50.00	27.00	5.00	16.00	2.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGC..................................................................	22	2	48.00	36.50	10.00	1.00	0.00	0.50
..................................................CGCGCTAATCAGTGACCGGGGC...............................................................................................................	22	2	44.50	14.50	3.00	2.50	19.50	5.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGC..................................................................	22	2	39.50	21.50	12.50	2.00	3.50	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGCG.................................................................	23	2	38.50	22.00	12.00	3.00	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................	22	2	35.50	12.00	0.00	0.00	19.50	4.00
...............................................................................................TCAGGCACCTGAAGTAGCGCG...................................................................	21	2	35.00	21.50	7.00	6.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCG...................................................................	21	2	33.00	26.00	5.50	1.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGC..................................................................	22	2	33.00	25.50	2.50	3.50	1.00	0.50
...............................................................................................TCATGTACCTGAAGTAGCGCGC..................................................................	22	2	32.50	5.00	0.50	2.00	22.50	2.50
...............................................................................................TCAGTTACCTGAAGTAGCGCGC..................................................................	22	2	31.50	16.50	0.00	2.00	11.50	1.50
...............................................................................................TCAGGTACCTGAAGTAGAGCGCG.................................................................	23	2	31.50	29.50	1.50	0.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................	21	2	30.50	25.00	0.50	5.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCG...................................................................	21	2	30.00	24.50	1.50	4.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTACCGCGC..................................................................	22	2	29.50	26.00	0.50	2.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................	25	2	29.00	22.00	1.00	5.00	0.50	0.50
...............................................................................................TCAGGTACCTGAAGTAACGCGCG.................................................................	23	2	29.00	26.50	1.00	1.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTT................................................................	24	2	27.50	21.50	2.00	1.50	2.50	0.00
..................................................CGCGCTAATCAGTGACCGGGG................................................................................................................	21	2	27.00	19.50	3.50	2.00	2.00	0.00
...............................................................................................TCAGGTACCTGAAGAAGCGCGC..................................................................	22	2	27.00	27.00	0.00	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCAC..................................................................	22	2	26.50	15.00	0.00	1.00	8.50	2.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGCG.................................................................	23	2	26.50	25.00	1.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAACGCGC..................................................................	22	2	26.00	21.00	1.00	3.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGAGCGC..................................................................	22	2	25.50	24.50	1.00	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCCG.................................................................	23	2	25.50	21.50	1.50	1.50	0.00	1.00
...............................................................................................TCAGGTACCTGAAGTATCGCGC..................................................................	22	2	24.00	15.00	0.50	6.50	1.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCACGCG.................................................................	23	2	23.00	18.50	1.50	2.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAACGCG...................................................................	21	2	23.00	19.00	0.00	4.00	0.00	0.00
...............................................................................................TCATGTACCTGAAGTAGCGCGCG.................................................................	23	2	22.50	6.50	0.00	0.50	12.50	3.00
...............................................................................................TCAGGTACCTGAATTAGCGCGCG.................................................................	23	2	22.00	11.00	0.50	1.50	8.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCACG.................................................................	23	2	21.50	21.00	0.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGAGCG...................................................................	21	2	21.50	19.00	0.00	2.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................	21	2	21.50	13.00	1.50	6.50	0.50	0.00
...............................................................................................TCAGGTACCTGAGGTAGCGCG...................................................................	21	2	21.00	17.50	0.50	3.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGAAGCGCG...................................................................	21	2	21.00	19.50	0.50	1.00	0.00	0.00
..................................................CGCGCTAATCAGTGACCGGGGCC..............................................................................................................	23	2	20.50	1.00	0.00	0.00	13.00	6.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................	23	2	19.50	19.00	0.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTATCGCG...................................................................	21	2	19.50	7.50	0.50	11.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGGAGCGCGC..................................................................	22	2	19.00	13.00	1.50	3.00	1.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCACGC..................................................................	22	2	19.00	16.00	1.00	0.50	1.00	0.50
...............................................................................................TCAGGTACCTGGAGTAGCGCGC..................................................................	22	2	19.00	15.00	1.50	1.50	0.50	0.50
...............................................................................................TCGGGTACCTGAAGTAGCGCG...................................................................	21	2	19.00	14.50	0.00	4.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTATCGCGCG.................................................................	23	2	19.00	10.00	0.50	5.50	3.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCTCG...................................................................	21	2	18.50	6.50	0.00	12.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................	24	2	18.50	1.50	1.00	0.00	10.50	5.50
...............................................................................................TCAGTTACCTGAAGTAGCGCGCG.................................................................	23	2	18.50	13.00	0.00	1.00	4.00	0.50
...............................................................................................TCAGGTACCTGACGTAGCGCGCG.................................................................	23	2	18.50	9.50	3.00	5.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTCGCGCGCG.................................................................	23	2	18.50	15.50	0.00	3.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCC..................................................................	22	2	18.50	16.00	1.50	0.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTACCGCGCG.................................................................	23	2	18.50	15.50	1.00	0.50	1.50	0.00
...............................................................................................TCATGTACCTGAAGTAGCGCG...................................................................	21	2	18.50	5.50	0.00	5.50	7.00	0.50
...............................................................................................TCAGGTACCTGCAGTAGCGCGC..................................................................	22	2	18.00	4.50	0.50	7.50	5.50	0.00
...............................................................................................TCAGTTACCTGAAGTAGCGCG...................................................................	21	2	18.00	13.50	0.50	2.50	1.00	0.50
...............................................................................................CCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	18.00	14.50	2.50	0.50	0.00	0.50
...............................................................................................TCAGGTACCTGAAGAAGCGCGCG.................................................................	23	2	18.00	16.50	1.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCTCGCG.................................................................	23	2	18.00	13.00	1.00	4.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCCCG...................................................................	21	2	17.00	11.00	0.00	6.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTC...............................................................	25	2	17.00	7.00	1.00	0.00	6.00	3.00
...............................................................................................TCAGGTACCTGAGGTAGCGCGCG.................................................................	23	2	16.50	14.00	2.00	0.00	0.00	0.50
...............................................................................................TCAGGTACCTGAAGTACCGCG...................................................................	21	2	16.50	12.50	1.00	3.00	0.00	0.00
...............................................................................................TCAGGTACCTGCAGTAGCGCG...................................................................	21	2	16.50	4.00	0.50	12.00	0.00	0.00
...............................................................................................TCAGGTACCTGAGGTAGCGCGC..................................................................	22	2	16.50	14.00	0.50	1.50	0.50	0.00
...............................................................................................TCAGGTACCTGACGTAGCGCG...................................................................	21	2	16.00	7.00	0.50	8.50	0.00	0.00
...............................................................................................TCAGGTACCCGAAGTAGCGCGCG.................................................................	23	2	16.00	14.00	0.00	0.00	1.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCTCG.................................................................	23	2	16.00	7.00	0.00	3.00	5.00	1.00
...............................................................................................TCAGGTACCTGAAGGAGCGCG...................................................................	21	2	16.00	8.50	0.50	7.00	0.00	0.00
...............................................................................................TCAGGTACCTGGAGTAGCGCGCG.................................................................	23	2	15.50	11.00	2.00	1.50	0.50	0.50
...............................................................................................TCAGGTACCTGAAGTAGCACG...................................................................	21	2	15.50	12.50	0.50	2.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCTCGC..................................................................	22	2	15.50	10.50	1.00	3.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGTGCG.................................................................	23	2	15.00	13.00	1.50	0.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCTC..................................................................	22	2	15.00	9.00	2.00	1.50	2.50	0.00
...............................................................................................TCAGGTACCCGAAGTAGCGCG...................................................................	21	2	15.00	12.50	0.00	2.00	0.50	0.00
...............................................................................................TCAxGTACCTGAAGTAGCGCGC..................................................................	21	2	15.00	3.00	0.00	0.00	10.50	1.50
...............................................................................................CCAGGTACCTGAAGTAGCGCG...................................................................	21	2	15.00	11.50	0.50	3.00	0.00	0.00
...............................................................................................TCAGGTACCTGAAATAGCGCGC..................................................................	22	2	14.50	11.00	0.50	1.50	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................	24	2	14.50	5.50	0.50	1.00	5.50	2.00
...............................................................................................TCAGGAACCTGAAGTAGCGCGCG.................................................................	23	2	14.50	13.00	0.50	0.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCCCGC..................................................................	22	2	14.00	11.50	0.50	2.00	0.00	0.00
...............................................................................................TCAGGTACCTGAATTAGCGCG...................................................................	21	2	14.00	10.00	0.00	3.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGAG...................................................................	21	2	14.00	11.00	0.00	3.00	0.00	0.00
...............................................................................................TCGGGTACCTGAAGTAGCGCGCG.................................................................	23	2	13.50	10.50	1.00	0.00	1.00	1.00

droMoj3

-------------------------------------GTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGGTTTCGATTATC---TCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCTAGACGCATT-----------------CAACGCTCT--------------------GC	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
...............................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	9947.00	6545.00	1706.00	1211.50	484.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	6286.50	4179.00	727.50	523.00	857.00
...............................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................	21	2	4088.00	2789.50	179.50	136.50	982.50
...............................................................................................TCAGGTACCTGAAGTAGCGC....................................................................	20	2	1027.50	767.50	68.50	43.50	148.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................	24	2	437.50	352.50	32.50	25.00	27.50
..................................................CGCGCTAATCAGTGACCGGGGCT..............................................................................................................	23	2	375.50	271.00	53.00	41.00	10.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................	24	2	257.00	146.50	20.50	13.00	77.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................	22	2	223.00	88.00	3.50	4.50	127.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................	22	2	164.00	125.50	12.00	5.50	21.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGCG.................................................................	23	2	128.00	62.00	39.00	27.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................	23	2	116.00	67.00	24.00	20.00	5.00
...............................................................................................TCAGGTACCTGAAGTAGCG.....................................................................	19	2	91.00	76.00	7.00	4.50	3.50
...............................................................................................TCAGGGACCTGAAGTAGCGCGCG.................................................................	23	2	65.50	18.50	29.50	14.50	3.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................	23	2	63.50	42.00	4.50	1.00	16.00
...............................................................................................TCAGGTACCTGCAGTAGCGCGCG.................................................................	23	2	58.00	0.50	4.50	42.00	11.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTT................................................................	24	2	49.50	34.50	8.00	3.50	3.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................	25	2	49.00	43.50	2.50	1.50	1.50
...............................................................................................TCAGGTACCTGAAGTGGCGCGC..................................................................	22	2	41.00	27.00	9.00	4.00	1.00
.................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................	21	2	39.00	9.50	15.00	11.00	3.50
...............................................................................................TCAGGCACCTGAAGTAGCGCGCG.................................................................	23	2	35.50	16.00	14.50	4.00	1.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................	23	2	34.00	16.00	10.50	5.50	2.00
...............................................................................................TCAGGGACCTGAAGTAGCGCGC..................................................................	22	2	32.50	8.50	13.00	6.50	4.50
...............................................................................................TCAGGTACCTGAAGTGGCGC....................................................................	20	2	24.50	22.00	2.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTGGCGCG...................................................................	21	2	24.00	18.50	3.00	2.00	0.50
...............................................................................................TCAGGTACCTGCAGTAGCGCGC..................................................................	22	2	24.00	1.50	1.50	8.50	12.50
...............................................................................................TCAGGTACCTGACGTAGCGCGCG.................................................................	23	2	23.50	1.50	5.00	15.50	1.50
...............................................................................................TCAGGTACCTGAAGTCGCGCGCG.................................................................	23	2	22.00	2.50	3.00	14.50	2.00
.................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................	20	2	21.50	5.00	5.50	6.00	5.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................	24	2	21.50	9.50	5.50	3.00	3.50
...............................................................................................TCAGGTACCTGCAGTAGCGCG...................................................................	21	2	20.50	0.00	0.50	2.50	17.50
...............................................................................................TCAGGTACCTGAAGTAGCTCGCG.................................................................	23	2	19.00	11.00	4.00	4.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCTCG.................................................................	23	2	17.50	10.00	3.00	4.50	0.00
...............................................................................................TCAGGGACCTGAAGTAGCGCG...................................................................	21	2	17.00	4.50	2.00	2.50	8.00
...............................................................................................TCAGGTACCTTAAGTAGCGCGCG.................................................................	23	2	17.00	3.50	1.50	12.00	0.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGC..................................................................	22	2	17.00	4.00	7.00	2.00	4.00
...............................................................................................TCAGGTACCTGAAGTATCGCGCG.................................................................	23	2	15.50	8.50	2.50	4.50	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGCG.................................................................	23	2	15.50	4.50	6.50	2.50	2.00
...............................................................................................TCAGGTACCTGAAGCAGCGCGC..................................................................	22	2	14.00	3.00	5.00	1.00	5.00
..................................................CGCGCTAATCAGTGACCGGGGC...............................................................................................................	22	2	14.00	8.00	1.00	3.50	1.50
...............................................................................................TCAGGTACCTGAAGTATCGCGC..................................................................	22	2	13.50	9.00	1.00	3.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGAGCGCG.................................................................	23	2	13.50	8.50	2.50	2.00	0.50
.................................................................................................AGGTACCTGAAGTAGCGCG...................................................................	19	2	13.00	5.00	1.00	1.00	6.00
...............................................................................................TCAGGTACCTGAATTAGCGCGCG.................................................................	23	2	13.00	5.50	4.00	3.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................	24	2	12.50	6.00	1.00	0.00	5.50
...............................................................................................TCAGGTACCTGGAGTAGCGCGCG.................................................................	23	2	12.00	3.00	4.50	4.00	0.50
...............................................................................................TCAGGAACCTGAAGTAGCGCGCG.................................................................	23	2	12.00	7.50	4.00	0.50	0.00
...............................................................................................TCAGGTACCTGACGTAGCGCGC..................................................................	22	2	12.00	1.00	2.00	5.50	3.50
...............................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................	21	2	12.00	7.50	0.50	0.50	3.50
...............................................................................................TCAGGTACCTGAAGTAGCGCACG.................................................................	23	2	12.00	9.50	1.50	1.00	0.00
...............................................................................................TCGGGTACCTGAAGTAGCGCGCG.................................................................	23	2	12.00	3.50	7.00	1.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGTGCG.................................................................	23	2	11.00	8.00	1.00	0.50	1.50
...............................................................................................TCATGTACCTGAAGTAGCGCGCG.................................................................	23	2	11.00	10.00	0.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................	24	2	11.00	5.50	1.00	0.50	4.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................	24	2	10.50	5.50	1.50	0.50	3.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................	26	2	10.50	8.50	1.50	0.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCCCG.................................................................	23	2	10.50	3.50	4.00	2.00	1.00
...............................................................................................TCAGGTACCTGAAGTAGCACGCG.................................................................	23	2	10.00	6.00	1.00	2.00	1.00
...............................................................................................TCAGGTACCTGAGGTAGCGCGCG.................................................................	23	2	9.50	4.00	3.50	2.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCTCGC..................................................................	22	2	9.50	4.00	1.00	2.00	2.50
...............................................................................................TCAGGTACCTGAAGTACCGCGCG.................................................................	23	2	9.50	5.50	3.50	0.50	0.00
...............................................................................................TCAGGTACCTGAAGGAGCGCGC..................................................................	22	2	9.00	2.00	3.50	3.00	0.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTC...............................................................	25	2	9.00	7.50	0.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................	23	2	9.00	7.00	0.00	2.00	0.00
...............................................................................................TCAGTTACCTGAAGTAGCGCGCG.................................................................	23	2	8.50	8.50	0.00	0.00	0.00
...............................................................................................TCAGGTACCTGGAGTAGCGCGC..................................................................	22	2	8.50	3.00	0.50	2.50	2.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGAG.................................................................	23	2	8.00	5.50	0.50	2.00	0.00
...............................................................................................CCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	8.00	3.50	1.00	3.00	0.50
...............................................................................................TCAGGTACCCGAAGTAGCGCGCG.................................................................	23	2	8.00	4.50	2.50	1.00	0.00
..................................................CGCGCTAATCAGTGACCGGGG................................................................................................................	21	2	8.00	2.50	3.00	2.50	0.00
................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................	22	2	8.00	3.50	1.00	2.50	1.00
...............................................................................................TCGGGTACCTGAAGTAGCGCGC..................................................................	22	2	8.00	1.50	1.00	1.50	4.00
...............................................................................................TCAGGTACCTGAACTAGCGCGCG.................................................................	23	2	7.50	2.50	4.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGC......................................................................	18	2	7.50	0.50	4.00	3.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCTC..................................................................	22	2	7.50	6.00	0.50	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGAGCG.................................................................	23	2	7.50	4.00	1.00	1.50	1.00
...............................................................................................TCAGGTACCTGACGTAGCGCG...................................................................	21	2	7.50	0.00	2.00	0.00	5.50
...............................................................................................TCAGGCACCTGAAGTAGCGCG...................................................................	21	2	7.50	5.00	1.50	0.50	0.50
...............................................................................................TCAGGTACCTGAAGTCGCGCG...................................................................	21	2	7.00	2.00	0.50	1.50	3.00
...............................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................	21	2	7.00	3.50	1.00	1.00	1.50
...............................................................................................TCAGGTACCTGGAGTAGCGCG...................................................................	21	2	7.00	0.50	0.50	1.00	5.00
...............................................................................................TCAGGTACCTGAAGTAGCGCAC..................................................................	22	2	7.00	3.50	0.50	0.50	2.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTTT...............................................................	25	2	7.00	4.50	1.00	0.00	1.50
...............................................................................................TCAGGTACCTGAAGTAGTGCGCG.................................................................	23	2	6.50	3.00	1.50	2.00	0.00
...............................................................................................TCAGGTACATGAAGTAGCGCGCG.................................................................	23	2	6.50	3.50	0.50	0.50	2.00
...............................................................................................TCAGTTACCTGAAGTAGCGCG...................................................................	21	2	6.50	6.00	0.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGAGCGC..................................................................	22	2	6.00	1.50	2.00	1.00	1.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGTG.................................................................	23	2	6.00	3.00	2.00	1.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................	24	2	6.00	2.50	0.50	1.50	1.50
...............................................................................................TCAGTTACCTGAAGTAGCGCGC..................................................................	22	2	6.00	5.50	0.50	0.00	0.00
...............................................................................................TCAGGTACCTGAAGTAGCACGC..................................................................	22	2	6.00	3.50	0.00	2.00	0.50
...............................................................................................TCAGGTACCTGAAATAGCGCGCG.................................................................	23	2	5.50	2.50	1.00	1.50	0.50
...............................................................................................TTAGGTACCTGAAGTAGCGCGC..................................................................	22	2	5.50	3.50	0.50	1.00	0.50
...............................................................................................TCAGGTACCTGAAGTGGCGCGCGT................................................................	24	2	5.50	1.00	3.00	1.50	0.00
...............................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................	21	2	5.50	4.00	0.00	0.50	1.00
...............................................................................................CCAGGTACCTGAAGTAGCGCG...................................................................	21	2	5.50	3.50	0.50	0.50	1.00
...............................................................................................TCATGTACCTGAAGTAGCGCGC..................................................................	22	2	5.50	5.00	0.00	0.50	0.00
...............................................................................................TCAGGTACCTGAAGCAGCGCG...................................................................	21	2	5.50	2.00	0.50	0.50	2.50
................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................	21	2	5.50	2.50	0.00	1.00	2.00
...............................................................................................TCAGGGACCTGAAGTAGCGC....................................................................	20	2	5.50	2.00	2.50	0.50	0.50
...............................................................................................TCAGGTACCCGAAGTAGCGCGC..................................................................	22	2	5.00	1.50	1.00	1.50	1.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGAA.................................................................	23	2	5.00	3.50	0.50	0.00	1.00

droGri2

-------------------------------------GTCGTTTACCGCGCGCGCTAATCAGTGACCGGGGCTGGTTTTGATTATC---CCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGCAT-------------------------------------------------	Size	Hit Count	Total Norm	V109 Male body
...............................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................	23	2	2164.00	2164.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................	22	2	936.00	936.00
...............................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................	21	2	533.00	533.00
..................................................CGCGCTAATCAGTGACCGGGGCT..............................................................................................................	23	2	216.50	216.50
...............................................................................................TCAGGTACCTGAAGTAGCGC....................................................................	20	2	105.50	105.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................	24	2	79.00	79.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................	23	2	57.50	57.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................	22	2	31.50	31.50
...............................................................................................TCAGGTACCTGAAGTGGCGCGCG.................................................................	23	2	25.50	25.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................	23	2	23.50	23.50
...............................................................................................TCAGGTACCTGAAGTAGAGCGCG.................................................................	23	2	21.50	21.50
...............................................................................................TCAGGTACCTGAAGTAGCG.....................................................................	19	2	19.50	19.50
.................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................	21	2	19.50	19.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................	23	2	18.50	18.50
...............................................................................................TCAGGTACCTGAAGTAGTGCGCG.................................................................	23	2	13.50	13.50
...............................................................................................TCAGGTACCTGAAGTAGAGCGC..................................................................	22	2	12.00	12.00
...............................................................................................TCAGGTACCTGAAGTGGCGCGC..................................................................	22	2	12.00	12.00
...............................................................................................TCAGGTCCCTGAAGTAGCGCGCG.................................................................	23	2	11.00	11.00
...............................................................................................TCAGGTACCTGAAGTAGAGCG...................................................................	21	2	10.00	10.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCCG.................................................................	23	2	9.50	9.50
...............................................................................................TCAGGTACCTGAAGTAGGGCGCG.................................................................	23	2	9.00	9.00
...............................................................................................TCAGGAACCTGAAGTAGCGCGCG.................................................................	23	2	7.50	7.50
...............................................................................................TCAGGTACCTGAAGTAGTGCGC..................................................................	22	2	7.00	7.00
...............................................................................................TCCGGTACCTGAAGTAGCGCGCG.................................................................	23	2	7.00	7.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGCG.................................................................	23	2	7.00	7.00
...............................................................................................TCAGGTACATGAAGTAGCGCGCG.................................................................	23	2	6.50	6.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCTT................................................................	24	2	6.00	6.00
.................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................	20	2	6.00	6.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................	25	2	5.50	5.50
...............................................................................................TCAGGTTCCTGAAGTAGCGCGCG.................................................................	23	2	5.50	5.50
...............................................................................................TCAGGTACCTGAAGTAGGGCGC..................................................................	22	2	5.50	5.50
...............................................................................................TCAGGTACCTGAAGTGGCGCG...................................................................	21	2	5.00	5.00
...............................................................................................TCAGGTACCTGAAGTAGTGCG...................................................................	21	2	5.00	5.00
.................................................................................................AGGTACCTGAAGTAGCGCG...................................................................	19	2	5.00	5.00
...............................................................................................TCAGGCACCTGAAGTAGCGCGC..................................................................	22	2	5.00	5.00
...............................................................................................TCAGGTACTTGAAGTAGCGCGCG.................................................................	23	2	5.00	5.00
...............................................................................................TCAGGGACCTGAAGTAGCGCGCG.................................................................	23	2	4.50	4.50
...............................................................................................TCAGGTACCTGAAGTAGCGCACG.................................................................	23	2	4.50	4.50
...............................................................................................TCGGGTACCTGAAGTAGCGCGCG.................................................................	23	2	4.50	4.50
...............................................................................................TCAGGTCCCTGAAGTAGCGCGC..................................................................	22	2	4.50	4.50
...............................................................................................TCAGTTACCTGAAGTAGCGCGCG.................................................................	23	2	4.00	4.00
...............................................................................................TCAGGTACCTGAAGTGGCGC....................................................................	20	2	4.00	4.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................	24	2	4.00	4.00
...............................................................................................TCAGGTACCTGAGGTAGCGCGCG.................................................................	23	2	3.50	3.50
...............................................................................................TCAGGTACCTGAAGTAGCTCGCG.................................................................	23	2	3.50	3.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGTG.................................................................	23	2	3.50	3.50
...............................................................................................TCAGGTACCTGCAGTAGCGCGCG.................................................................	23	2	3.50	3.50
...............................................................................................TCAGGTACCTGAAGTCGCGCGCG.................................................................	23	2	3.50	3.50
...............................................................................................TCAGGCACCTGAAGTAGCGCG...................................................................	21	2	3.00	3.00
..................................................CGCGCTAATCAGTGACCGGGGC...............................................................................................................	22	2	3.00	3.00
...............................................................................................TCAGGTACTTGAAGTAGCGCGC..................................................................	22	2	3.00	3.00
...............................................................................................TCAGGTACATGAAGTAGCGCG...................................................................	21	2	3.00	3.00
..................................................CGCGCTAATCAGTGACCGGGGCC..............................................................................................................	23	2	3.00	3.00
...............................................................................................TCTGGTACCTGAAGTAGCGCGCG.................................................................	23	2	3.00	3.00
...............................................................................................TCAGGTACCTGAAGTACCGCGCG.................................................................	23	2	3.00	3.00
...............................................................................................TCAGGTACGTGAAGTAGCGCGC..................................................................	22	2	3.00	3.00
...............................................................................................TCAGGTATCTGAAGTAGCGCGCG.................................................................	23	2	2.50	2.50
...............................................................................................TCAGGTACATGAAGTAGCGCGC..................................................................	22	2	2.50	2.50
...............................................................................................TCAGGAACCTGAAGTAGCGCGC..................................................................	22	2	2.50	2.50
...............................................................................................TCAGTTACCTGAAGTAGCGCG...................................................................	21	2	2.50	2.50
...............................................................................................TCACGTACCTGAAGTAGCGCGCG.................................................................	23	2	2.50	2.50
...............................................................................................TCAGGTAACTGAAGTAGCGCGCG.................................................................	23	2	2.50	2.50
...............................................................................................TCAGGTACCTGAAGTAACGCGCG.................................................................	23	2	2.50	2.50
...............................................................................................TCCGGTACCTGAAGTAGCGCG...................................................................	21	2	2.50	2.50
..................................................CGCGCTAATCAGTGACCAGGGCT..............................................................................................................	23	2	2.50	2.50
...............................................................................................TCAGGTACCTGAAGTATCGCGC..................................................................	22	2	2.50	2.50
...............................................................................................TCAGGTACGTGAAGTAGCGCGCG.................................................................	23	2	2.50	2.50
..................................................CGCGCTAATCAGTGACCCGGGCT..............................................................................................................	23	2	2.50	2.50
...............................................................................................TCAGGTACCTGAAGTCGCGCGC..................................................................	22	2	2.00	2.00
...............................................................................................TCAGGTACCTGACGTAGCGCGCG.................................................................	23	2	2.00	2.00
...............................................................................................TCAGGTACCTGGAGTAGCGCGCG.................................................................	23	2	2.00	2.00
...............................................................................................TCAGGTACCTGAAGTAGCGCCC..................................................................	22	2	2.00	2.00
...............................................................................................TCTGGTACCTGAAGTAGCGCGC..................................................................	22	2	2.00	2.00
...............................................................................................TCAGGTCCCTGAAGTAGCGCG...................................................................	21	2	2.00	2.00
...............................................................................................TCAGGTACCTTAAGTAGCGCGCG.................................................................	23	2	2.00	2.00
...............................................................................................TCCGGTACCTGAAGTAGCGCGC..................................................................	22	2	2.00	2.00
...............................................................................................TCAGCTACCTGAAGTAGCGCGCG.................................................................	23	2	2.00	2.00
...............................................................................................TCAGGTACCTGAAGTAGGGCG...................................................................	21	2	2.00	2.00
...............................................................................................TCAGGTACCTGAAGTAGCCCGCG.................................................................	23	2	2.00	2.00
...............................................................................................TCAGGTACCTGAAGTAGCGCTCG.................................................................	23	2	2.00	2.00
...............................................................................................TCAGGTACCTGACGTAGCGCGC..................................................................	22	2	2.00	2.00
...............................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................	21	2	2.00	2.00
...............................................................................................TCAGGTACTTGAAGTAGCGCG...................................................................	21	2	2.00	2.00
...............................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................	22	2	2.00	2.00
...............................................................................................TCAGGAACCTGAAGTAGCGCG...................................................................	21	2	2.00	2.00
...............................................................................................TCAGGTTCCTGAAGTAGCGCG...................................................................	21	2	2.00	2.00
...............................................................................................TCATGTACCTGAAGTAGCGCGCG.................................................................	23	2	2.00	2.00
...............................................................................................TCAGGTACCCGAAGTAGCGCGCG.................................................................	23	2	2.00	2.00
..................................................CGCGCTAATCAGTGACCGGGGCA..............................................................................................................	23	2	2.00	2.00
...............................................................................................TCAGGTACCTGAAGTAGCACGCG.................................................................	23	2	1.50	1.50
...............................................................................................TCATGTACCTGAAGTAGCGCGC..................................................................	22	2	1.50	1.50
...............................................................................................TCAGGTACCCGAAGTAGCGCGC..................................................................	22	2	1.50	1.50
...............................................................................................TCAGGTACCTCAAGTAGCGCGCG.................................................................	23	2	1.50	1.50
...............................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................	21	2	1.50	1.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGCCT................................................................	24	2	1.50	1.50
...............................................................................................TCAGGTACCTGAAATAGCGCGCG.................................................................	23	2	1.50	1.50
...............................................................................................TCAGGTACCTGAAGTAGCGCGAG.................................................................	23	2	1.50	1.50
...............................................................................................TCAGGGACCTGAAGTAGCGCGC..................................................................	22	2	1.50	1.50
...............................................................................................TCAGGTGCCTGAAGTAGCGCG...................................................................	21	2	1.50	1.50
...............................................................................................TCAGCTACCTGAAGTAGCGCGC..................................................................	22	2	1.50	1.50
..............................................................................................CTCAGGTACCTGAAGTAGCGCGCG.................................................................	24	2	1.50	1.50

Generated: 04/20/2012 at 05:28:52 EDT

dme-mir-275

chr2L:7425795-7425892 +

Known_mirbase

intergenic

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Legend

Re-alignment after removal of non-confident orthologs

20-way Secondary Structure

Small RNA-seq read pileup