Possible Orthologs for dme-mir-275

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2L:7217350-7217477 +	96.13	TGATGTTCCCCCGACTGTAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT TGATGTTCCCCCGACTGAAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTCCGCCAT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .........................................................................TCAGGTACCTGAAGTAGCGCGC................................. 22 2 4056.50 1370.50 1118.00 995.50 572.50 .........................................................................TCAGGTACCTGAAGTAGCGCG.................................. 21 2 3384.50 2389.00 135.00 207.00 653.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCG................................ 23 2 904.00 525.50 98.00 149.50 131.00 .........................................................................TCAGGTACCTGAAGTAGCGC................................... 20 2 332.00 176.00 62.50 56.00 37.50 ..................................CGCGCTAATCAGTGACCGGGGCT....................................................................... 23 2 214.00 16.00 88.50 77.00 32.50 ..................................CGCGCTAATCAGTGACCGGGGC........................................................................ 22 2 111.00 14.50 51.00 36.00 9.50 .........................................................................TCAGGTACCTGAAGTAGCGCGA................................. 22 2 106.00 78.50 5.50 11.00 11.00 .........................................................................TCAGGTACCTGAAGTAGCGCGT................................. 22 2 93.00 61.00 10.50 18.00 3.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCGT............................... 24 2 74.50 34.50 9.00 16.50 14.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCGA............................... 24 2 64.00 32.00 5.50 16.50 10.00 .........................................................................TCATGTACCTGAAGTAGCGCG.................................. 21 2 43.00 1.00 1.50 3.50 37.00 .........................................................................TCATGTACCTGAAGTAGCGCGC................................. 22 2 35.00 0.00 15.00 7.50 12.50 .........................................................................TCAGGGACCTGAAGTAGCGCG.................................. 21 2 33.00 25.00 1.50 1.50 5.00 ..................................CGCGCTAATCAGTGACCGGGGCC....................................................................... 23 2 30.50 0.00 14.00 10.00 6.50 .........................................................................TCAGGTACCTGCAGTAGCGCG.................................. 21 2 30.50 30.50 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGG................................. 22 2 25.50 2.50 5.50 12.00 5.50 ..................................CGCGCTAATCAGTGACCGGGGCTT...................................................................... 24 2 21.50 2.00 9.00 10.00 0.50 .........................................................................TCAGGGACCTGAAGTAGCGCGC................................. 22 2 19.50 11.00 2.50 3.00 3.00 ..................................CGCGCTAATCAGTGACCG............................................................................ 18 2 18.00 0.00 12.50 5.00 0.50 ...........................................................................AGGTACCTGAAGTAGCGCG.................................. 19 2 18.00 17.00 0.00 0.50 0.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCA................................ 23 2 17.00 15.50 1.50 0.00 0.00 .........................................................................TCAGTTACCTGAAGTAGCGCGC................................. 22 2 16.50 0.00 4.50 4.00 8.00 .........................................................................TCAGGTACCTGAAGTAGCG.................................... 19 2 15.00 6.00 5.50 3.00 0.50 ...........................................................................AGGTACCTGAAGTAGCGCGC................................. 20 2 14.50 11.50 2.00 1.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCAC................................. 22 2 14.50 0.00 6.00 7.00 1.50 .........................................................................TCAGGTACCTGCAGTAGCGCGC................................. 22 2 14.50 14.50 0.00 0.00 0.00 .........................................................................TCACGTACCTGAAGTAGCGCG.................................. 21 2 14.00 0.50 0.00 0.50 13.00 .........................................................................TCAGGTACCTGACGTAGCGCG.................................. 21 2 13.50 13.50 0.00 0.00 0.00 .........................................................................TCACGTACCTGAAGTAGCGCGC................................. 22 2 12.50 0.50 6.00 2.00 4.00 .........................................................................TCAxGTACCTGAAGTAGCGCG.................................. 20 2 12.50 0.00 0.50 0.50 11.50 .........................................................................TCAGGCACCTGAAGTAGCGCGC................................. 22 2 12.00 9.50 1.00 1.00 0.50 .........................................................................TCAxGTACCTGAAGTAGCGCGC................................. 21 2 11.50 0.00 4.50 2.00 5.00 .........................................................................TCATGTACCTGAAGTAGCGCGCG................................ 23 2 11.00 0.00 2.00 1.50 7.50 .........................................................................TCAGGTACCTCAAGTAGCGCGC................................. 22 2 11.00 0.50 5.00 1.00 4.50 .........................................................................TCAGGTACCTGGAGTAGCGCG.................................. 21 2 10.00 9.50 0.00 0.00 0.50 .........................................................................TCAGGTACCTGAAGGAGCGCGC................................. 22 2 10.00 5.00 1.00 2.50 1.50 ..................................CGCGCTAATCAGTGACCGGGG......................................................................... 21 2 9.50 2.00 4.00 2.50 1.00 .........................................................................TCAGGCACCTGAAGTAGCGCG.................................. 21 2 9.50 9.00 0.00 0.00 0.50 .........................................................................TCAGGTACCTGACGTAGCGCGC................................. 22 2 9.50 9.50 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGGAGCGCG.................................. 21 2 9.00 7.00 1.00 0.50 0.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCGG............................... 24 2 9.00 0.00 3.00 1.50 4.50 .........................................................................TCAGGTACCTGAAGTCGCGCG.................................. 21 2 8.50 8.50 0.00 0.00 0.00 .........................................................................TCAGGTAACTGAAGTAGCGCG.................................. 21 2 8.50 7.00 0.00 0.50 1.00 ..................................CGCGCTAATCAGTGACCGGGGCG....................................................................... 23 2 8.00 0.00 2.50 3.50 2.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGC............................... 24 2 8.00 3.50 1.00 1.50 2.00 .........................................................................TCAGGTACCTGCAGTAGCGCGCG................................ 23 2 7.00 7.00 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGC..................................... 18 2 7.00 0.00 2.50 4.50 0.00 .........................................................................TCAGGTACCTGAAGTGGCGCGC................................. 22 2 6.00 1.50 2.00 2.50 0.00 .........................................................................TCAGGGACCTGAAGTAGCGCGCG................................ 23 2 6.00 4.50 0.00 0.00 1.50 .........................................................................TCGGGTACCTGAAGTAGCGCG.................................. 21 2 6.00 5.50 0.00 0.00 0.50 ..........................................................................CAGGTACCTGAAGTAGCGCGC................................. 21 2 6.00 2.00 1.00 3.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCC................................ 23 2 6.00 2.50 2.00 1.50 0.00 .........................................................................TCAGGTACCTTAAGTAGCGCGC................................. 22 2 5.50 0.50 1.00 2.00 2.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGTT.............................. 25 2 5.50 3.00 0.00 2.00 0.50 .........................................................................TCAGGTACCTGAAGTAGCGCTC................................. 22 2 5.50 1.00 3.50 0.50 0.50 .........................................................................TAAGGTACCTGAAGTAGCGCG.................................. 21 2 5.50 5.50 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCACGC................................. 22 2 5.50 2.00 2.00 1.50 0.00 .........................................................................TCAGGTAACTGAAGTAGCGCGC................................. 22 2 5.50 5.00 0.00 0.50 0.00 .........................................................................TCAGGTACCTGTAGTAGCGCG.................................. 21 2 5.00 5.00 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCAA............................... 24 2 5.00 3.50 0.00 0.00 1.50 .........................................................................TCAGGTACATGAAGTAGCGCG.................................. 21 2 5.00 5.00 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGCAGCGCGC................................. 22 2 4.50 2.50 1.50 0.00 0.50 ...........................................................................AGGTACCTGAAGTAGCGCGCG................................ 21 2 4.50 4.50 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGCAGCGCG.................................. 21 2 4.50 3.50 0.00 0.50 0.50 .........................................................................TCGGGTACCTGAAGTAGCGCGC................................. 22 2 4.50 2.00 2.00 0.00 0.50 .........................................................................TCAGGTACCTGAAGTGGCGCG.................................. 21 2 4.50 3.50 0.50 0.00 0.50 .........................................................................TCAGGTACCTGAAGTAGCGAG.................................. 21 2 4.50 4.50 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGTG.................................. 21 2 4.50 4.50 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGTGCG.................................. 21 2 4.50 4.00 0.00 0.50 0.00 ..................................CGCGCTAATCAGTGACCGGGAC........................................................................ 22 2 4.50 0.00 3.50 0.50 0.50 .........................................................................TCAGGTACCTGAAGTATCGCGC................................. 22 2 4.50 2.00 2.00 0.00 0.50 .........................................................................TCAGGTACCTGACGTAGCGCGCG................................ 23 2 4.00 4.00 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCTCGC................................. 22 2 4.00 1.50 2.00 0.50 0.00 .............................................................................................................ATCTCTCCTTCTCCGCCA. 18 2 4.00 0.00 0.50 3.50 0.00 .........................................................................TCAGGGACCTGAAGTAGCGC................................... 20 2 4.00 2.50 1.00 0.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCTCG................................ 23 2 4.00 0.00 3.50 0.50 0.00 .........................................................................TCAGGTACCTGGAGTAGCGCGC................................. 22 2 4.00 2.50 0.00 1.00 0.50 .........................................................................TCAGGTGCCTGAAGTAGCGCGC................................. 22 2 4.00 2.50 0.50 0.50 0.50 .........................................................................TCAGGTACCTGAAGTAGAGCGC................................. 22 2 3.50 3.50 0.00 0.00 0.00 ..................................CGCGCTAATCAGTGACCGG........................................................................... 19 2 3.50 0.00 3.00 0.50 0.00 ........................................................................CTCAGGTACCTGAAGTAGCGCG.................................. 22 2 3.50 3.00 0.00 0.00 0.50 .........................................................................TCAGGTACCCGAAGTAGCGCGCG................................ 23 2 3.50 3.00 0.00 0.50 0.00 .........................................................................TCAGGTACCTGAAGTGGCGCGCG................................ 23 2 3.50 1.00 1.50 0.50 0.50 .........................................................................TCAGGTACCTGATGTAGCGCG.................................. 21 2 3.50 3.50 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCC.................................. 21 2 3.50 2.50 0.00 0.00 1.00 .........................................................................TCAGGTGCCTGAAGTAGCGCG.................................. 21 2 3.50 3.50 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCA.................................. 21 2 3.50 2.50 0.00 0.00 1.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCTT............................... 24 2 3.50 1.00 0.50 1.00 1.00 ..........................................................................CAGGTACCTGAAGTAGCGCG.................................. 20 2 3.50 1.50 1.50 0.50 0.00 .........................................................................TCAGGTACCTGAAGTAGAGCG.................................. 21 2 3.50 3.50 0.00 0.00 0.00 .........................................................................TCAGTTACCTGAAGTAGCGCG.................................. 21 2 3.50 0.00 0.00 0.50 3.00 .........................................................................CCAGGTACCTGAAGTAGCGCGC................................. 22 2 3.50 1.50 1.50 0.00 0.50 .........................................................................CCAGGTACCTGAAGTAGCGCG.................................. 21 2 3.00 3.00 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCTA............................... 24 2 3.00 2.00 0.00 0.50 0.50 .........................................................................TCAGGTACCTGAAGTCGCGCGCG................................ 23 2 3.00 3.00 0.00 0.00 0.00 .........................................................................TCAGGTACCTGCCGTAGCGCG.................................. 21 2 3.00 3.00 0.00 0.00 0.00 ..................................CGCGCTAATCAGTGACCGGG.......................................................................... 20 2 3.00 0.50 2.00 0.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCT................................ 23 2 3.00 2.50 0.50 0.00 0.00 ...................................GCGCTAATCAGTGACCGGGGCT....................................................................... 22 2 3.00 0.00 1.50 1.00 0.50 ..................................CGCGCTAATCAGTGACCGGGGCTC...................................................................... 24 2 3.00 0.00 1.50 1.50 0.00 .........................................................................TCAGGTACATGAAGTAGCGCGC................................. 22 2 3.00 3.00 0.00 0.00 0.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_3:2941240-2941367 +	94.59	TGATGTTCCCCCGACTGTAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT TGATGTTCCCCCGACTGAAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTTGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTCCGTCAT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .........................................................................TCAGGTACCTGAAGTAGCGCGCG................................ 23 2 35129.50 10393.50 10647.00 14089.00 .........................................................................TCAGGTACCTGAAGTAGCGCGC................................. 22 2 20979.00 10923.00 5076.50 4979.50 .........................................................................TCAGGTACCTGAAGTAGCGCG.................................. 21 2 18672.50 9044.00 5712.00 3916.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCGT............................... 24 2 2788.00 964.00 964.50 859.50 .........................................................................TCAGGTACCTGAAGTAGCGC................................... 20 2 2413.00 1540.50 494.00 378.50 .........................................................................TCAGGTACCTGAAGTAGCGCGT................................. 22 2 1206.50 718.50 272.50 215.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCGA............................... 24 2 944.00 563.50 148.50 232.00 ..................................CGCGCTAATCAGTGACCGGGGCT....................................................................... 23 2 842.50 198.00 460.50 184.00 .........................................................................TCAGGTACCTGAAGTAGCGCGA................................. 22 2 742.00 524.50 153.50 64.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGTT.............................. 25 2 382.50 172.50 28.00 182.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCT................................ 23 2 340.50 169.00 39.50 132.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCA................................ 23 2 271.00 70.00 120.00 81.00 .........................................................................TCAGGTACCTGAAGTGGCGCGCG................................ 23 2 221.50 62.50 9.50 149.50 ...........................................................................AGGTACCTGAAGTAGCGCGCG................................ 21 2 206.00 35.50 80.00 90.50 ..................................CGCGCTAATCAGTGACCGGGGC........................................................................ 22 2 187.50 38.50 35.00 114.00 .........................................................................TCAGGTACCTGAAGTAGCG.................................... 19 2 167.50 76.00 45.00 46.50 .........................................................................TCAGGTACCTGAAGTAGCGCGTT................................ 23 2 143.00 85.50 8.00 49.50 .........................................................................TCAGGTACCTGAAGTGGCGCGC................................. 22 2 141.50 98.00 4.50 39.00 .........................................................................TCAGGTACCTGAAGTAGCCCGCG................................ 23 2 131.00 102.50 11.00 17.50 .........................................................................TCAGGTACCTGAAGTAGCACGCG................................ 23 2 127.50 92.50 7.00 28.00 ...........................................................................AGGTACCTGAAGTAGCGCGC................................. 20 2 119.50 52.00 35.50 32.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCTT............................... 24 2 117.50 68.00 3.50 46.00 ...........................................................................AGGTACCTGAAGTAGCGCG.................................. 19 2 113.50 33.00 51.50 29.00 .........................................................................TCAGGTACCTGAAGTAGCCCGC................................. 22 2 108.50 93.50 9.50 5.50 .........................................................................TCAGGTACCTGAAGTAGCACGC................................. 22 2 100.00 92.00 2.50 5.50 ..................................CGCGCTAATCAGTGACCGGGGCTT...................................................................... 24 2 99.00 48.50 7.00 43.50 .........................................................................TCAGGTACCTGAAGTAGCCCG.................................. 21 2 98.00 87.50 7.50 3.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCC................................ 23 2 93.50 39.50 20.00 34.00 .........................................................................TCAGGTACCTGAAGTAGCACG.................................. 21 2 91.00 80.50 4.00 6.50 .........................................................................TCAGGTACCTGAAGTAGCTCGCG................................ 23 2 86.00 66.00 4.50 15.50 .........................................................................TCAGGTACCTGAAGTGGCGCG.................................. 21 2 86.00 58.00 5.00 23.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGC............................... 24 2 81.00 24.00 32.50 24.50 .........................................................................TCAGGTACCTGAAGTAGCTCGC................................. 22 2 72.50 61.50 3.00 8.00 .........................................................................TCAGGTACCTGAAGCAGCGCGCG................................ 23 2 71.00 19.00 36.50 15.50 .........................................................................TCAGGTACCTGAAGTAGC..................................... 18 2 69.50 0.00 30.50 39.00 .........................................................................TCAGGTACCTGAAGTAGTGCGCG................................ 23 2 65.50 8.00 46.50 11.00 .........................................................................TCAGGTACCTGAAGTGGCGC................................... 20 2 65.50 56.50 0.00 9.00 .........................................................................TCAGGCACCTGAAGTAGCGCGCG................................ 23 2 65.00 32.00 12.00 21.00 ..................................CGCGCTAATCAGTGACCGGGG......................................................................... 21 2 63.50 24.50 10.50 28.50 .........................................................................TCAGGTACCTGAAGTAGCGCCCG................................ 23 2 62.50 25.50 15.50 21.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCTA............................... 24 2 61.50 23.50 12.00 26.00 .........................................................................TCAGGTACCTGAAGTCGCGCGCG................................ 23 2 61.00 17.50 26.00 17.50 .........................................................................TCAGGTACCTGAAGTAGCTCG.................................. 21 2 59.00 54.50 0.50 4.00 .........................................................................TCAGGTACCCGAAGTAGCGCGCG................................ 23 2 54.50 13.00 23.00 18.50 .........................................................................TCAGGTACCTGAAGTACCGCGCG................................ 23 2 54.00 9.00 26.00 19.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGTA.............................. 25 2 49.50 19.50 12.50 17.50 .........................................................................TCAGGTACCTGAAGTATCGCGCG................................ 23 2 47.50 12.50 7.50 27.50 .........................................................................TCAGGTACCTGAAGTAGCGCGTG................................ 23 2 47.50 8.50 30.00 9.00 .........................................................................TCAGTTACCTGAAGTAGCGCGCG................................ 23 2 46.50 7.00 17.50 22.00 .........................................................................TCAGGTACCTGAAGTAGCGTGCG................................ 23 2 46.00 10.50 25.50 10.00 .........................................................................TCAGGTACCTGACGTAGCGCGCG................................ 23 2 45.50 16.00 10.00 19.50 .........................................................................TCAGGTACCTGAAGTACCGCGC................................. 22 2 44.00 26.50 13.00 4.50 .........................................................................TCAGGTACCTGAAGCAGCGCGC................................. 22 2 43.50 21.00 16.50 6.00 .........................................................................TCAGGTACCTGAAGTAGCGTGC................................. 22 2 43.50 10.00 30.50 3.00 .........................................................................TCAGGTACCTGAAGTAGAGCGCG................................ 23 2 42.00 14.00 10.00 18.00 .........................................................................TCAGGTACCTGAGGTAGCGCGCG................................ 23 2 42.00 8.50 23.00 10.50 .........................................................................TCATGTACCTGAAGTAGCGCGCG................................ 23 2 41.50 9.00 11.00 21.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCGTTT............................. 26 2 40.50 26.00 3.50 11.00 .........................................................................TCAGGCACCTGAAGTAGCGCG.................................. 21 2 40.50 23.50 11.50 5.50 .........................................................................TCAGGTACCTGAAGTAGCGCGTA................................ 23 2 40.00 33.00 3.50 3.50 .........................................................................TTAGGTACCTGAAGTAGCGCGCG................................ 23 2 39.50 1.50 33.00 5.00 .........................................................................TCAGGTACCTGAAGTAGCGCCC................................. 22 2 39.50 32.50 3.00 4.00 .........................................................................TCAGGTATCTGAAGTAGCGCGCG................................ 23 2 38.50 2.50 28.00 8.00 ..........................................................................CAGGTACCTGAAGTAGCGCGCG................................ 22 2 38.50 8.50 12.00 18.00 .........................................................................TCAGGAACCTGAAGTAGCGCGCG................................ 23 2 37.50 10.00 2.50 25.00 .........................................................................TCAGGTACCTGAAGTAGCGCACG................................ 23 2 37.00 12.50 8.50 16.00 .........................................................................TCAGGTACTTGAAGTAGCGCGCG................................ 23 2 37.00 3.50 30.50 3.00 .........................................................................CCAGGTACCTGAAGTAGCGCGCG................................ 23 2 36.50 13.00 10.50 13.00 .........................................................................TCAGGTACCTGAAGTAGTGCGC................................. 22 2 36.00 6.50 25.00 4.50 .........................................................................TCAGGTACCTGAATTAGCGCGCG................................ 23 2 34.00 10.00 5.50 18.50 .........................................................................TCAGGTACCTGAAGTAGCGCTCG................................ 23 2 34.00 12.00 4.00 18.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGAA.............................. 25 2 33.00 18.00 6.00 9.00 .........................................................................TCAGGTACCTGAAGTAGCGCGAG................................ 23 2 33.00 9.50 4.00 19.50 .........................................................................TCAGGTACCTGAAGTGGCGCGCGA............................... 24 2 33.00 23.50 0.50 9.00 .........................................................................TTAGGTACCTGAAGTAGCGCGC................................. 22 2 33.00 5.00 25.50 2.50 .........................................................................TCAGGTACCCGAAGTAGCGCG.................................. 21 2 32.00 12.50 10.50 9.00 .........................................................................TCAGTTACCTGAAGTAGCGCGC................................. 22 2 31.50 13.50 7.50 10.50 .........................................................................TCAGGTACCTGAACTAGCGCGCG................................ 23 2 31.50 11.50 8.50 11.50 .........................................................................TCAGGTACCTGAAGTAGCGCA.................................. 21 2 30.50 16.00 10.00 4.50 .........................................................................TCAGCTACCTGAAGTAGCGCGCG................................ 23 2 28.50 7.00 8.50 13.00 .........................................................................TCAGGCACCTGAAGTAGCGCGC................................. 22 2 28.50 17.50 6.00 5.00 .........................................................................TCAGGTACCTGAAGTAGCGAGCG................................ 23 2 28.00 5.00 3.00 20.00 .........................................................................TCGGGTACCTGAAGTAGCGCGCG................................ 23 2 28.00 4.00 14.00 10.00 ..........................................................................CAGGTACCTGAAGTAGCGCGC................................. 21 2 28.00 12.00 8.50 7.50 .........................................................................TCAGGTGCCTGAAGTAGCGCGCG................................ 23 2 28.00 7.50 11.00 9.50 .........................................................................TCAxGTACCTGAAGTAGCGCGCG................................ 22 2 27.50 4.50 10.00 13.00 .........................................................................TCAGGTACATGAAGTAGCGCGCG................................ 23 2 26.50 4.00 6.50 16.00 .........................................................................TCAGGTACCCGAAGTAGCGCGC................................. 22 2 26.00 11.50 9.00 5.50 .........................................................................TCAGGTAACTGAAGTAGCGCGCG................................ 23 2 25.50 2.50 3.50 19.50 .........................................................................TCACGTACCTGAAGTAGCGCGCG................................ 23 2 25.50 7.00 5.00 13.50 ..................................CGCGCTAATCAGTGACCGGGGT........................................................................ 22 2 25.00 13.00 2.50 9.50 .........................................................................TCAGTTACCTGAAGTAGCGCG.................................. 21 2 25.00 10.00 10.00 5.00 .........................................................................TCAGGTACCTGAAGCAGCGCG.................................. 21 2 24.50 10.50 11.50 2.50 .........................................................................TCAGGTACCTGAGGTAGCGCGC................................. 22 2 24.50 8.50 10.00 6.00 ........................................................................CTCAGGTACCTGAAGTAGCGCGCG................................ 24 2 24.00 2.00 8.00 14.00 .........................................................................TTAGGTACCTGAAGTAGCGCG.................................. 21 2 24.00 2.50 19.00 2.50 .........................................................................CCAGGTACCTGAAGTAGCGCG.................................. 21 2 23.50 13.50 6.00 4.00 .........................................................................TCAGGTACCTGAAGTAGTGCG.................................. 21 2 23.50 6.00 14.50 3.00 .........................................................................TCAGGTACCTGAAGTATCGCGC................................. 22 2 23.00 11.00 3.50 8.50 .........................................................................TCAGGTACCTCAAGTAGCGCGCG................................ 23 2 23.00 6.00 8.00 9.00 .........................................................................TCAGGTACCTGAGGTAGCGCG.................................. 21 2 22.50 7.50 10.50 4.50

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2L:5473766-5473897 -	88.22	TGATGTTCCCCCGACTGT--AAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT-- TGATGTTCCCCCGACTGAACAGAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGCCAGACATATATCTCCAACTCCACGATAT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...........................................................................TCAGGTACCTGAAGTAGCGCG.................................... 21 2 5033.50 1878.00 202.50 2533.00 397.50 22.50 ...........................................................................TCAGGTACCTGAAGTAGCGCGC................................... 22 2 4623.50 537.50 364.00 2258.50 652.50 811.00 ...........................................................................TCAGGTACCTGAAGTAGCGCGCG.................................. 23 2 2034.50 380.50 106.50 1218.00 173.00 156.50 ...........................................................................TCAGGTACCTGAAGTAGCGC..................................... 20 2 1163.50 103.00 55.50 872.00 123.00 10.00 ...........................................................................TCAGGTACCTGAAGTAGCGCGT................................... 22 2 303.50 24.00 23.50 203.50 50.50 2.00 ...........................................................................TCAGGTACCTGAAGTAGCGCGCGT................................. 24 2 219.50 17.00 4.00 122.50 7.00 69.00 ....................................CGCGCTAATCAGTGACCGGGGCT......................................................................... 23 2 213.50 9.00 26.50 70.00 42.50 65.50 ...........................................................................TCAGGTACCTGAAGTAGCG...................................... 19 2 152.00 5.50 17.00 91.50 37.50 0.50 ...........................................................................TCAGGTACCTGAAGTAGCGCGA................................... 22 2 70.50 34.00 5.00 28.50 3.00 0.00 ...........................................................................TCAGGTACCTGAAGTAGCGCGCGA................................. 24 2 51.50 15.00 0.00 20.00 0.00 16.50 ...........................................................................TCAGGTACCTGCAGTAGCGCG.................................... 21 2 41.00 26.50 4.50 1.00 9.00 0.00 ....................................CGCGCTAATCAGTGACCGGGGC.......................................................................... 22 2 34.50 3.50 1.50 1.50 3.50 24.50 .............................................................................AGGTACCTGAAGTAGCGCG.................................... 19 2 32.50 17.00 1.50 12.00 2.00 0.00 ...........................................................................TCAGGTACCTGACGTAGCGCG.................................... 21 2 30.00 9.00 1.50 10.50 9.00 0.00 ...........................................................................TCAGGGACCTGAAGTAGCGCGC................................... 22 2 29.50 4.00 3.50 4.00 15.00 3.00 ...........................................................................TCAGGTACCTGAAGTAGCGCGTT.................................. 23 2 29.00 1.00 1.50 22.50 4.00 0.00 .............................................................................AGGTACCTGAAGTAGCGCGC................................... 20 2 27.50 3.50 2.00 19.50 2.00 0.50 ...........................................................................TCAGGTACCTGAAGTAGCGCGCT.................................. 23 2 26.00 3.50 2.50 16.00 4.00 0.00 ...........................................................................TCAGGGACCTGAAGTAGCGCG.................................... 21 2 22.00 12.00 1.50 3.00 5.50 0.00 ...........................................................................TCAGGTACCTGAAGTAGCGCGCA.................................. 23 2 20.00 5.00 1.00 11.50 2.50 0.00 ...........................................................................TCAGGTACCTGCAGTAGCGCGC................................... 22 2 20.00 6.00 1.00 0.00 11.50 1.50 ...........................................................................TCAGGTACCTGACGTAGCGCGC................................... 22 2 19.50 2.00 0.00 8.00 9.50 0.00 ...........................................................................TCAGGTACCTGCAGTAGCGCGCG.................................. 23 2 17.00 5.50 3.50 1.50 6.50 0.00 ...........................................................................TCAGGCACCTGAAGTAGCGCG.................................... 21 2 16.50 5.00 0.00 5.00 6.50 0.00 .............................................................................AGGTACCTGAAGTAGCGCGCG.................................. 21 2 16.50 4.00 1.50 8.50 2.00 0.50 ...........................................................................TCAGGTACCTGAAGTAGCGCGCGG................................. 24 2 15.50 0.50 0.50 0.50 0.00 14.00 ....................................CGCGCTAATCAGTGACCGGGG........................................................................... 21 2 15.00 0.50 2.50 5.00 6.00 1.00 ...........................................................................TCAGGTACCTGACGTAGCGCGCG.................................. 23 2 14.50 2.50 0.00 5.50 6.50 0.00 ...........................................................................TCAGGTACCTGAAGTAGC....................................... 18 2 14.00 0.00 5.00 0.00 9.00 0.00 ...........................................................................TCAGGCACCTGAAGTAGCGCGC................................... 22 2 13.00 2.50 2.50 2.50 5.50 0.00 ...........................................................................TCAGGTACCTGAAGTAGCGCGCGTT................................ 25 2 13.00 0.50 0.00 12.00 0.00 0.50 ...........................................................................TCAGGGACCTGAAGTAGCGCGCG.................................. 23 2 13.00 2.50 1.00 5.50 3.00 1.00 ...........................................................................TCATGTACCTGAAGTAGCGCGC................................... 22 2 13.00 0.00 0.50 2.00 0.50 10.00 ...........................................................................TCAGGTACCTGAAGTAGCGCGCTT................................. 24 2 12.50 1.00 0.00 10.00 0.50 1.00 ...........................................................................TCAGGTACCTGAAGCAGCGCGC................................... 22 2 12.00 1.50 0.50 8.00 2.00 0.00 ...........................................................................TCAGGTACCTGAAGCAGCGCG.................................... 21 2 11.00 3.50 0.50 6.00 1.00 0.00 ....................................CGCGCTAATCAGTGACCGGGGCC......................................................................... 23 2 11.00 0.00 0.00 0.00 0.00 11.00 ...........................................................................TCAGGTACCTGAAGTAGCGCA.................................... 21 2 11.00 2.00 0.50 8.50 0.00 0.00 ...........................................................................TCAGGTACCTGAAGTATCGCGC................................... 22 2 11.00 0.00 1.50 5.00 3.00 1.50 ...........................................................................TCAGGTACCTGAAGTAGCGCCC................................... 22 2 10.00 0.50 0.00 7.50 1.50 0.50 ...........................................................................TCAGGTACCTGAAGTAGCGCGG................................... 22 2 10.00 0.00 2.00 1.50 0.00 6.50 ...........................................................................TCAGGTACCTGAAGTACCGCGC................................... 22 2 9.00 0.00 0.50 7.00 1.50 0.00 ...........................................................................TCAGGGACCTGAAGTAGCGC..................................... 20 2 8.50 0.00 1.00 1.50 6.00 0.00 ...........................................................................TCAGGTACCTGAAGGAGCGCGC................................... 22 2 8.00 2.00 0.00 1.00 5.00 0.00 ...........................................................................TCAGGTACCTGAGGTAGCGCG.................................... 21 2 8.00 2.50 1.00 3.50 1.00 0.00 ...........................................................................TCAGGTACCTGAAGTAGCGCC.................................... 21 2 8.00 0.50 0.00 6.50 1.00 0.00 ....................................CGCGCTAATCAGTGACCGGGGCTT........................................................................ 24 2 7.50 0.00 1.50 1.50 0.50 4.00 ...........................................................................TCAGGTACCTGGAGTAGCGCG.................................... 21 2 7.50 6.00 0.50 0.50 0.50 0.00 ...........................................................................TCAGGTACCTGAGGTAGCGCGC................................... 22 2 7.50 1.50 0.50 4.00 1.00 0.50 ...........................................................................TCAGGTACCTGAAGTAACGCGC................................... 22 2 7.50 1.00 0.50 4.50 0.50 1.00 ...........................................................................TCAGGTACCTGGAGTAGCGCGC................................... 22 2 7.00 2.00 1.00 1.00 2.50 0.50 ...........................................................................TCAGGTACCTGAAGGAGCGCG.................................... 21 2 7.00 4.50 1.00 0.50 1.00 0.00 ...........................................................................TCAGGTACCTGAAGTAGCGCCCG.................................. 23 2 7.00 0.50 0.00 6.00 0.50 0.00 ...........................................................................TCAGGTACCTGAAGTAGAGCGC................................... 22 2 7.00 2.50 0.50 0.50 2.50 1.00 ...........................................................................TCAGGTACCTGAAGTAGCTCGC................................... 22 2 7.00 0.00 1.00 3.50 1.50 1.00 ...........................................................................TCAGGTACCTGAAGTAGCGCTCG.................................. 23 2 7.00 0.00 0.00 3.00 1.00 3.00 ...........................................................................TCAGGTACCTGAAGTAGCGCGCGC................................. 24 2 6.50 0.50 0.00 1.00 0.00 5.00 ...........................................................................TCAGGTACCTGAAGTATCGCGCG.................................. 23 2 6.50 0.50 0.50 4.50 1.00 0.00 ...........................................................................TCAGTTACCTGAAGTAGCGCGC................................... 22 2 6.50 0.00 0.00 3.00 0.00 3.50 ...........................................................................TCAGGTACCTGAAGTAGAGCG.................................... 21 2 6.50 4.50 0.00 2.00 0.00 0.00 ...........................................................................TCAGGTACCTGAAGTAGCGCT.................................... 21 2 6.50 0.50 0.50 4.00 1.50 0.00 ...........................................................................TCAGGTACCTGAAGTACCGCG.................................... 21 2 6.50 1.00 0.50 4.50 0.50 0.00 ...........................................................................ACAGGTACCTGAAGTAGCGCG.................................... 21 2 6.00 1.00 0.50 2.50 2.00 0.00 ...........................................................................TCAGGTACCTGAAGTAGCGCAC................................... 22 2 6.00 0.00 0.50 1.50 0.50 3.50 ...........................................................................TCAGGTACCTGAAGTAGCGT..................................... 20 2 6.00 0.00 1.00 3.50 1.50 0.00 ...........................................................................TCGGGTACCTGAAGTAGCGCG.................................... 21 2 6.00 2.50 0.00 2.50 1.00 0.00 ...........................................................................TCAGGTACCTGAAGTGGCGCGC................................... 22 2 5.50 1.50 0.00 1.00 1.50 1.50 ...........................................................................TCAGGCACCTGAAGTAGCGCGCG.................................. 23 2 5.50 0.50 1.00 1.00 2.50 0.50 ...........................................................................CCAGGTACCTGAAGTAGCGCG.................................... 21 2 5.50 1.50 0.00 2.50 1.50 0.00 ...........................................................................TCAGGTACCTGAAGTAGCCCG.................................... 21 2 5.50 1.00 0.50 1.50 2.00 0.50 ...........................................................................TCAGGTACCTGAAGTCGCGCG.................................... 21 2 5.50 2.50 1.00 0.50 1.50 0.00 ............................................................................CAGGTACCTGAAGTAGCGCGC................................... 21 2 5.50 0.50 0.50 1.50 1.50 1.50 ...........................................................................TCAGGTACCTGAAGTAGCCCGC................................... 22 2 5.00 1.00 0.50 1.50 2.00 0.00 ...........................................................................TCACGTACCTGAAGTAGCGCGC................................... 22 2 5.00 0.50 0.00 2.00 0.00 2.50 ...........................................................................TCAGGTAACTGAAGTAGCGCGC................................... 22 2 5.00 3.50 0.00 0.50 0.50 0.50 ...........................................................................TCAGGTACCTGAAGTAGCGCTC................................... 22 2 5.00 0.00 1.50 2.00 1.00 0.50 ...........................................................................TCAGGTACCTCAAGTAGCGCGC................................... 22 2 4.50 0.50 0.00 0.50 0.50 3.00 ...........................................................................CCAGGTACCTGAAGTAGCGCGC................................... 22 2 4.50 0.50 0.00 2.50 1.00 0.50 ...........................................................................TCAGGTACCTGAAGAAGCGCG.................................... 21 2 4.50 1.50 0.00 1.00 2.00 0.00 ...........................................................................TCAGCTACCTGAAGTAGCGCGC................................... 22 2 4.50 0.50 0.00 1.00 0.00 3.00 ...........................................................................TCAGGAACCTGAAGTAGCGCG.................................... 21 2 4.50 3.00 0.00 0.50 1.00 0.00 ...........................................................................TCAGGTACCTGAAGTACCGCGCG.................................. 23 2 4.50 0.50 0.00 2.50 1.00 0.50 ...........................................................................TCAGGTACCTGATGTAGCGCG.................................... 21 2 4.50 1.00 0.50 0.50 2.50 0.00 ...........................................................................TCAGGTACCTGAAGTAGCTCG.................................... 21 2 4.50 1.50 0.50 1.50 1.00 0.00 ...........................................................................TCAGGTACCCGAAGTAGCGCGC................................... 22 2 4.50 0.50 0.50 1.50 1.00 1.00 ...........................................................................TCAGGTACCTGAAGTAGCGCGCC.................................. 23 2 4.50 0.50 0.00 3.00 0.50 0.50 ...........................................................................TCAGGTACCTGAAGTACCGC..................................... 20 2 4.50 0.00 0.00 4.50 0.00 0.00 ...........................................................................TCAGGTACCTGAAGTATCGCG.................................... 21 2 4.50 1.00 0.00 2.00 1.50 0.00 ...........................................................................TCAGGTACCTTAAGTAGCGCGC................................... 22 2 4.00 0.00 0.50 1.50 0.50 1.50 ...........................................................................TCAGGTACCTGAATTAGCGCG.................................... 21 2 4.00 0.00 0.00 4.00 0.00 0.00 ...........................................................................TCAGGTACATGAAGTAGCGCG.................................... 21 2 4.00 3.00 0.00 1.00 0.00 0.00 ...........................................................................TCAGGTACCTGAAGCAGCGCGCG.................................. 23 2 4.00 0.00 0.50 2.50 1.00 0.00 ...........................................................................TCAGGTACCTGAAGTAGCACG.................................... 21 2 4.00 1.50 1.00 0.50 1.00 0.00 ...........................................................................TCAGGTACCTGAAGTAGCGCTT................................... 22 2 4.00 0.00 0.00 3.00 0.50 0.50 ...........................................................................TCAGGTACCTGAAGTAGCGTG.................................... 21 2 4.00 1.50 0.00 2.00 0.50 0.00 ...........................................................................TCAGGTACCTGAAGTAGCGAG.................................... 21 2 4.00 1.50 0.50 2.00 0.00 0.00 ...........................................................................TAAGGTACCTGAAGTAGCGCG.................................... 21 2 4.00 2.50 0.50 0.50 0.50 0.00 ...........................................................................TCAGGTACCTGAAGTGGCGCGCG.................................. 23 2 4.00 0.00 0.00 1.50 1.50 1.00 .............................................................................AGGTACCTGAAGTAGCGC..................................... 18 2 4.00 0.00 0.50 3.00 0.50 0.00 ...........................................................................TCAGGTACCTGTAGTAGCGCG.................................... 21 2 4.00 2.50 0.00 0.00 1.50 0.00 ...........................................................................TCAGGTACCTGAAGTAGCACGC................................... 22 2 4.00 1.00 0.00 1.00 1.50 0.50

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4929:16344506-16344633 +	96.13	TGATGTTCCCCCGACTGTAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT TGATGTTCCCCCGACTGAAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGCCAGACATATATCTCCATCTCCACCAT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .........................................................................TCAGGTACCTGAAGTAGCGCGCG................................ 23 2 15070.00 175.50 1188.50 0.00 13706.00 .........................................................................TCAGGTACCTGAAGTAGCGCG.................................. 21 2 7750.00 755.50 719.50 0.00 6275.00 .........................................................................TCAGGTACCTGAAGTAGCGCGC................................. 22 2 4687.00 304.00 787.00 0.00 3596.00 .........................................................................TCAGGTACCTGAAGTAGCGC................................... 20 2 579.00 37.00 75.50 0.00 466.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCGT............................... 24 2 479.50 1.50 63.50 0.00 414.50 ..................................CGCGCTAATCAGTGACCGGGGCT....................................................................... 23 2 338.00 23.50 38.00 0.00 276.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCT................................ 23 2 296.00 1.50 15.00 0.00 279.50 .........................................................................TCAGGTACCTGAAGTAGCG.................................... 19 2 215.50 1.00 35.00 0.00 179.50 .........................................................................TCAGGTACCTGAAGTAGCGCGT................................. 22 2 205.00 10.00 43.50 0.00 151.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCA................................ 23 2 185.00 4.50 6.50 0.00 174.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCC................................ 23 2 163.00 2.50 2.50 0.00 158.00 .........................................................................TCATGTACCTGAAGTAGCGCGCG................................ 23 2 132.00 0.50 0.00 0.00 131.50 .........................................................................TCAGGTACCTGAAGTATCGCGCG................................ 23 2 123.00 2.00 8.00 0.00 113.00 ...........................................................................AGGTACCTGAAGTAGCGCGCG................................ 21 2 118.00 0.50 11.00 0.00 106.50 .........................................................................TCAGGTACCTGAAGTAGCGCTCG................................ 23 2 113.50 1.00 1.50 0.00 111.00 .........................................................................TCAGGTACCTGAAGTAGCTCGCG................................ 23 2 107.50 1.00 5.00 0.00 101.50 ..................................CGCGCTAATCAGTGACCGGGGC........................................................................ 22 2 104.50 4.50 3.50 0.00 96.50 .........................................................................TAAGGTACCTGAAGTAGCGCGCG................................ 23 2 92.50 0.00 0.50 0.00 92.00 .........................................................................TCAGGTACCTGAAGTAGCGCGAG................................ 23 2 92.00 0.00 2.50 0.00 89.50 .........................................................................TCAGGTACCTTAAGTAGCGCGCG................................ 23 2 92.00 2.00 3.50 0.00 86.50 .........................................................................TCAGGTACATGAAGTAGCGCGCG................................ 23 2 85.00 0.00 0.50 0.00 84.50 .........................................................................TCAGGTACCTGAAGTAGC..................................... 18 2 84.00 0.00 0.00 0.00 84.00 .........................................................................TCAGGTACCTGAAGTAGCGAGCG................................ 23 2 75.50 0.00 3.00 0.00 72.50 ..................................CGCGCTAATCAGTGACCGGGG......................................................................... 21 2 73.00 1.00 7.00 0.00 65.00 .........................................................................TCAGGTACCTGAAGTATCGCG.................................. 21 2 65.00 7.50 1.50 0.00 56.00 .........................................................................TCAGGTACCTGAAGTAGAGCGCG................................ 23 2 65.00 0.00 3.00 0.00 62.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGA............................... 24 2 55.50 2.50 4.00 0.00 49.00 .........................................................................TCATGTACCTGAAGTAGCGCG.................................. 21 2 52.50 2.50 0.00 0.00 50.00 .........................................................................TCAGGTACCTGAAGTAGCTCG.................................. 21 2 51.50 9.50 1.50 0.00 40.50 .........................................................................TCAGGTACCTGAAGTAGCGCGA................................. 22 2 48.00 15.50 6.00 0.00 26.50 ...........................................................................AGGTACCTGAAGTAGCGCG.................................. 19 2 46.50 5.00 4.00 0.00 37.50 .........................................................................TCAGTTACCTGAAGTAGCGCGCG................................ 23 2 46.00 0.50 0.50 0.00 45.00 .........................................................................TAAGGTACCTGAAGTAGCGCG.................................. 21 2 44.50 1.00 0.50 0.00 43.00 .........................................................................TCAGGTACCTTAAGTAGCGCG.................................. 21 2 43.50 3.00 2.00 0.00 38.50 .........................................................................TCAGGTACCTGAATTAGCGCGCG................................ 23 2 43.00 0.50 8.00 0.00 34.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCGTT.............................. 25 2 42.00 0.00 3.00 0.00 39.00 .........................................................................TCAGGTACCTGAAGTATCGCGC................................. 22 2 41.50 5.00 3.00 0.00 33.50 .........................................................................TCAGGTACATGAAGTAGCGCG.................................. 21 2 38.50 1.00 0.00 0.00 37.50 .........................................................................TCAGGCACCTGAAGTAGCGCGCG................................ 23 2 36.50 0.00 2.50 0.00 34.00 .........................................................................TCAGGTACCTGAAGCAGCGCGCG................................ 23 2 35.50 0.00 1.00 0.00 34.50 .........................................................................TCAGGTACCTGACGTAGCGCGCG................................ 23 2 35.00 2.50 12.00 0.00 20.50 .........................................................................TCAGGTACCTGAAGTAGCGAG.................................. 21 2 35.00 1.00 3.00 0.00 31.00 .........................................................................TCAGGTACCTGAAGTAGCGCT.................................. 21 2 31.50 2.50 0.00 0.00 29.00 .........................................................................TCAGGTACCTGAAGTAGCTCGC................................. 22 2 31.00 1.00 4.00 0.00 26.00 .........................................................................TCAGGTAACTGAAGTAGCGCGCG................................ 23 2 29.50 0.50 0.00 0.00 29.00 .........................................................................TCATGTACCTGAAGTAGCGCGC................................. 22 2 29.50 0.50 0.00 0.00 29.00 .........................................................................TCAGGTACCTGAAGTCGCGCGCG................................ 23 2 28.50 0.50 4.50 0.00 23.50 ..................................CGCGCTAATCAGTGACCGGG.......................................................................... 20 2 27.50 0.00 3.50 0.00 24.00 .........................................................................TCAGGTACCTGAAGTAGCACGCG................................ 23 2 27.00 1.00 0.50 0.00 25.50 ..........................................................................CAGGTACCTGAAGTAGCGCGCG................................ 22 2 26.00 0.00 1.50 0.00 24.50 ...........................................................................AGGTACCTGAAGTAGCGCGC................................. 20 2 25.50 0.50 5.00 0.00 20.00 .........................................................................TCAGGTACCTGCAGTAGCGCGCG................................ 23 2 25.50 2.00 17.00 0.00 6.50 .........................................................................TCAGGGACCTGAAGTAGCGCG.................................. 21 2 25.00 10.00 8.50 0.00 6.50 .........................................................................TCAGGTACCTGAATTAGCGCG.................................. 21 2 25.00 1.50 0.50 0.00 23.00 .........................................................................TAAGGTACCTGAAGTAGCGCGC................................. 22 2 25.00 0.50 0.50 0.00 24.00 .........................................................................TCAGGGACCTGAAGTAGCGCGCG................................ 23 2 24.50 2.50 11.50 0.00 10.50 .........................................................................TCAGGTACCTGAAGTAGCGCTC................................. 22 2 24.00 1.50 1.50 0.00 21.00 .........................................................................TCAGGTACATGAAGTAGCGCGC................................. 22 2 23.50 0.00 0.00 0.00 23.50 .........................................................................TCAGGTACCTGAAGTAGCGTGCG................................ 23 2 23.50 0.50 0.50 0.00 22.50 .........................................................................TCAGGTACCTTAAGTAGCGCGC................................. 22 2 23.00 2.00 0.00 0.00 21.00 .........................................................................TCAGGTACCTGAAGTAGCGCGTT................................ 23 2 23.00 0.00 4.50 0.00 18.50 .........................................................................TCAGGTACCCGAAGTAGCGCGCG................................ 23 2 23.00 0.00 2.50 0.00 20.50 .........................................................................TCCGGTACCTGAAGTAGCGCGCG................................ 23 2 23.00 0.00 0.00 0.00 23.00 .........................................................................TCAGGTACCTGAGGTAGCGCGCG................................ 23 2 23.00 1.00 2.00 0.00 20.00 .........................................................................TCAGGTACCTGAAGTAGCGCCCG................................ 23 2 22.50 1.50 1.50 0.00 19.50 .........................................................................TCAGGTACCTGAAGTACCGCGCG................................ 23 2 22.00 0.00 0.00 0.00 22.00 .........................................................................TCAGGTACCTGAAGTAGAGCGC................................. 22 2 21.50 0.00 2.50 0.00 19.00 .........................................................................TCGGGTACCTGAAGTAGCGCGCG................................ 23 2 21.50 0.00 1.00 0.00 20.50 .........................................................................TCAGGTACCTGAAGCAGCGCG.................................. 21 2 21.50 8.00 2.00 0.00 11.50 .........................................................................TCAGGTACCTGAAGTAGAGCG.................................. 21 2 21.50 0.50 0.50 0.00 20.50 .........................................................................TCAGTTACCTGAAGTAGCGCG.................................. 21 2 20.00 2.00 1.00 0.00 17.00 .........................................................................TCAGGTACCTGAAGTAGCGCACG................................ 23 2 19.50 0.00 2.50 0.00 17.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCTT............................... 24 2 19.00 0.00 1.00 0.00 18.00 .........................................................................TCAGGTACCTGAAGTAGCCCGCG................................ 23 2 18.50 0.50 1.50 0.00 16.50 .........................................................................TCAGGCACCTGAAGTAGCGCG.................................. 21 2 18.00 5.50 2.00 0.00 10.50 .........................................................................TCAGGTACCTGAAGTAGCGCGTG................................ 23 2 17.50 0.00 1.00 0.00 16.50 .........................................................................TCAGGTACCTGCAGTAGCGCG.................................. 21 2 17.00 7.00 6.00 0.00 4.00 .........................................................................TCAGGTACCTGAAGCAGCGCGC................................. 22 2 16.50 1.50 4.00 0.00 11.00 .........................................................................TCAGGTACCTGAAGTAACGCGCG................................ 23 2 16.50 1.00 1.50 0.00 14.00 .........................................................................TCAGGTACCTGAAGTAGCGAGC................................. 22 2 16.50 0.00 2.00 0.00 14.50 .........................................................................TCAGGTACCTGAAGTCGCGCG.................................. 21 2 15.50 2.00 3.00 0.00 10.50 .........................................................................CCAGGTACCTGAAGTAGCGCGCG................................ 23 2 15.50 0.00 1.00 0.00 14.50 .........................................................................TCAGGGACCTGAAGTAGCGCGC................................. 22 2 15.00 4.00 8.50 0.00 2.50 .........................................................................TCAGGTACCTGAACTAGCGCGCG................................ 23 2 15.00 1.50 1.50 0.00 12.00 .........................................................................TCAGGTAACTGAAGTAGCGCG.................................. 21 2 15.00 0.50 0.50 0.00 14.00 .........................................................................TCAGGTACCTCAAGTAGCGCGCG................................ 23 2 15.00 1.00 0.00 0.00 14.00 .........................................................................TCAGGTACCTGCAGTAGCGCGC................................. 22 2 14.50 4.00 8.00 0.00 2.50 .........................................................................TCAGGTACCTGGAGTAGCGCGCG................................ 23 2 14.50 0.50 2.00 0.00 12.00 .........................................................................TCAGGCACCTGAAGTAGCGCGC................................. 22 2 14.00 3.00 3.50 0.00 7.50 .........................................................................TCAGGTACCTGAAGTGGCGCGCG................................ 23 2 14.00 0.00 1.00 0.00 13.00 .........................................................................TCAGGTACCTGAAGTAGTGCGCG................................ 23 2 13.50 0.00 0.00 0.00 13.50 ..................................CGCGCTAATCAGTGACCGGGGCTT...................................................................... 24 2 13.50 0.50 1.50 0.00 11.50 .........................................................................TCAGGTACCTGAGGTAGCGCG.................................. 21 2 13.50 1.00 1.50 0.00 11.00 .........................................................................TCAAGTACCTGAAGTAGCGCGCG................................ 23 2 13.00 0.50 2.50 0.00 10.00 .........................................................................TCAGGTGCCTGAAGTAGCGCGCG................................ 23 2 13.00 0.50 0.00 0.00 12.50 .........................................................................TCAGGTACCTAAAGTAGCGCGCG................................ 23 2 12.50 1.00 1.00 0.00 10.50 .........................................................................TCAGGTACCTGAAGTAGCGCC.................................. 21 2 12.50 3.50 1.00 0.00 8.00 ..................................CGCGCTAATCAGTGACCTGGGCT....................................................................... 23 2 12.50 0.00 0.00 0.00 12.50 ........................................................................CTCAGGTACCTGAAGTAGCGCGCG................................ 24 2 12.50 0.00 0.00 0.00 12.50 .........................................................................TCAGGTAACTGAAGTAGCGCGC................................. 22 2 12.50 0.00 0.50 0.00 12.00 .........................................................................TCTGGTACCTGAAGTAGCGCGCG................................ 23 2 12.00 0.00 0.00 0.00 12.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000454115:155668-155793 +	84.73	TGATGTTCCCCCGACTGTA---AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT T---GTTCCCCAG-CTGGAAAAAAGTCTACTGCCTTGCGCGCTAATCAGTGACCGGGGCTGGTT-TTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGCCAGACATACATCTCCATATCCAGCAC Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000409463:614687-614823 +	75.98	TGATGTTCCCCC------GACTGTAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCA----TCTTCACCAT TGATGTTCTCCCTGAAAAGGCTTAAATGTCTTCTACCTTGCGCGCTAATCAGAGACCGGGGCTGGTTT-TTACATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGCCAGACATACATCTCCATATGTCTTCATCGC Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302422:9125514-9125641 +	87.75	TGATGTTCCCCCGACTGTAAA--GTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT TGATGTTCCCCCGGCT-TAAAGAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-TTGTATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGCCAGACAGACATCTCCACATCCACCGC Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000415604:142420-142542 -	89.23	TGATGTTCCCCCGACTGTAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT CGATGTTCCCCCGGCTGAAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-TTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGCCAGACATACATCTCCAAC----CCAT Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
4	scf7180000491028:1624838-1624954 -	79.8	TGATGTTCCCCCGACTGTAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT TG----TTCCCCAACTGAAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-TCATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGCCAGACATATATCTTCATTTT------ Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000766421:7649-7769 -	83.38	TGATGTTCCCCCGACTGTAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTT-ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT TG---TTCCC-CAGCTGAAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTCATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGCCAGACATATATCTTCATTTCCA---- Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302384:54817-54950 -	77.31	TG--A--TGTTCC--CCCGACTGTA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT CGGGATGTGTTCCTTCCCAGCTGAAAAAGTCTCTTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-TTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGCCAGACATATATCATCGCCAACAACTC Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_12916:15333987-15334092 +	63.8	TGATGTTCCCCCGACTGTAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT -------------ACTCTCCAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTGC--AACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATC--------CGCCAT Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo .........................................................................TCAGGTACCTGAAGTAGCGCG.................................. 21 2 14433.50 9599.50 1122.00 582.00 3130.00 .........................................................................TCAGGTACCTGAAGTAGCGCGC................................. 22 2 11119.00 4698.00 3721.50 1272.50 1427.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCG................................ 23 2 8650.50 3476.00 3770.50 1176.50 227.50 .........................................................................TCAGGTACCTGAAGTAGCGC................................... 20 2 2821.00 1978.00 326.00 164.50 352.50 .........................................................................TCAGGTACCTGAAGTAGCGCGT................................. 22 2 1007.50 762.50 131.00 77.00 37.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGT............................... 24 2 968.00 170.00 766.50 26.50 5.00 .........................................................................TCAGGTACCTGAAGTAGCG.................................... 19 2 518.50 466.00 13.50 27.00 12.00 .........................................................................TCAGGTACCTGAAGTAGCGCGA................................. 22 2 399.00 218.50 34.50 6.50 139.50 ..................................CGCGCTAATCAGTGACCGGGGCT....................................................................... 23 2 349.50 134.00 189.00 25.50 1.00 .........................................................................TCAGGTACCTGAAGTATCGCG.................................. 21 2 176.50 113.50 27.50 2.50 33.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGA............................... 24 2 157.50 27.50 114.50 3.00 12.50 .........................................................................TCAGGTACCTGAAGTATCGCGC................................. 22 2 157.00 55.50 71.00 3.50 27.00 .........................................................................TCAGGTACCTGAAGTAGCGCA.................................. 21 2 144.50 118.00 9.50 2.00 15.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCT................................ 23 2 144.00 78.00 39.50 19.50 7.00 .........................................................................TCAGGTACCTGAAGTAGCGCT.................................. 21 2 127.50 102.50 9.00 1.50 14.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCGTT.............................. 25 2 107.00 24.50 80.00 2.00 0.50 .........................................................................TCAGGTACCTGAAGTATCGCGCG................................ 23 2 106.50 35.50 65.50 3.50 2.00 .........................................................................TCAGGTACCTGAAGTAGCGCGTT................................ 23 2 106.00 83.50 10.50 12.00 0.00 .........................................................................TCAGGTACCTGAAGTGGCGCGC................................. 22 2 103.50 70.50 20.50 11.00 1.50 .........................................................................TCAGGGACCTGAAGTAGCGCG.................................. 21 2 95.00 17.00 2.00 14.50 61.50 .........................................................................TCAGGTACCTGAAGTAGCGCTC................................. 22 2 94.50 48.00 37.00 2.50 7.00 .........................................................................TCAGGTACCTGAAGTGGCGCGCG................................ 23 2 93.50 46.50 35.50 11.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCTCGC................................. 22 2 91.50 29.50 42.00 1.50 18.50 .........................................................................TCAGGTACCTGAAGTAGCTCG.................................. 21 2 90.00 46.00 10.00 2.00 32.00 .........................................................................TCAGGTACCTGAAGTGGCGCG.................................. 21 2 90.00 71.00 11.50 5.00 2.50 .........................................................................TCAGGTACCTGAAGTAGCGCTCG................................ 23 2 83.50 41.00 36.50 3.00 3.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCA................................ 23 2 81.00 35.50 20.50 7.00 18.00 .........................................................................TCAGGTACCTGCAGTAGCGCG.................................. 21 2 72.50 31.50 0.50 4.00 36.50 .........................................................................TCAGGGACCTGAAGTAGCGCGC................................. 22 2 72.00 7.00 6.00 38.00 21.00 .........................................................................TCAGGTACCTGAAGTAGCGCAC................................. 22 2 71.50 41.00 26.50 1.00 3.00 .........................................................................TCAGGTACCTGAAGTAGCGCACG................................ 23 2 68.50 43.50 22.50 2.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCTCGCG................................ 23 2 65.00 17.50 43.50 2.50 1.50 .........................................................................TCAGGTACCTGAAGTAGCGAG.................................. 21 2 63.50 49.50 9.00 0.50 4.50 .........................................................................TCAGGTACCTGAAGTAGCGCC.................................. 21 2 57.50 37.00 2.50 1.50 16.50 .........................................................................TCAGGTACCTGAAGTAGCGCGAG................................ 23 2 57.00 22.50 32.00 2.00 0.50 .........................................................................TCAGGGACCTGAAGTAGCGCGCG................................ 23 2 53.00 6.00 13.00 29.50 4.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCTT............................... 24 2 50.00 18.00 29.50 2.00 0.50 .........................................................................TCAGGTACCTGAAGTAGCGAGCG................................ 23 2 49.50 14.00 32.50 2.50 0.50 ..................................CGCGCTAATCAGTGACCGGGGC........................................................................ 22 2 49.50 5.50 41.00 1.00 2.00 ..........................................................................CAGGTACCTGAAGTAGCGCGCG................................ 22 2 49.00 10.50 33.00 5.00 0.50 .........................................................................TCAGGTACCTGACGTAGCGCG.................................. 21 2 49.00 30.50 0.00 4.50 14.00 .........................................................................TAAGGTACCTGAAGTAGCGCG.................................. 21 2 47.50 41.50 3.50 2.00 0.50 .........................................................................TCAGGCACCTGAAGTAGCGCG.................................. 21 2 46.00 14.00 1.50 10.00 20.50 ..........................................................................CAGGTACCTGAAGTAGCGCGC................................. 21 2 44.50 15.50 20.00 6.00 3.00 .........................................................................TCAGGTACCTGGAGTAGCGCG.................................. 21 2 44.00 31.50 1.50 2.50 8.50 .........................................................................TCAGGTACCTGTAGTAGCGCG.................................. 21 2 41.50 35.50 0.00 0.50 5.50 .........................................................................TCAGGTACCTTAAGTAGCGCG.................................. 21 2 40.50 16.50 4.00 0.50 19.50 .........................................................................TCAGGTACCTGAAGTAGCGAGC................................. 22 2 40.50 16.00 21.00 2.00 1.50 .........................................................................TCAGGTACCTGAAGCAGCGCG.................................. 21 2 38.50 14.00 2.50 4.50 17.50 .........................................................................TCAGGTACCTGAAGCAGCGCGC................................. 22 2 38.00 6.00 7.00 12.50 12.50 ..................................CGCGCTAATCAGTGACCGGGG......................................................................... 21 2 38.00 10.50 21.50 3.50 2.50 .........................................................................TCAGGCACCTGAAGTAGCGCGC................................. 22 2 38.00 9.00 4.50 20.00 4.50 .........................................................................TCAGGTACCTGAAGTCGCGCG.................................. 21 2 38.00 27.00 0.50 0.50 10.00 ...........................................................................AGGTACCTGAAGTAGCGCG.................................. 19 2 38.00 9.50 1.50 6.00 21.00 .........................................................................TCAGGTACCTGAAGTGGCGC................................... 20 2 37.50 31.50 5.00 1.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGTTT............................... 24 2 37.50 23.50 11.00 2.00 1.00 .........................................................................TCAGGTACCTGAAGTAGCGCCC................................. 22 2 36.50 19.00 7.50 2.50 7.50 ...........................................................................AGGTACCTGAAGTAGCGCGC................................. 20 2 35.50 8.50 9.00 9.50 8.50 .........................................................................TCAGGTACCTGAAGTATCGC................................... 20 2 34.50 23.00 4.50 0.00 7.00 .........................................................................TAAGGTACCTGAAGTAGCGCGC................................. 22 2 34.50 16.50 15.50 2.50 0.00 .........................................................................TCAGGTACCTGAAGTAGAGCG.................................. 21 2 34.00 25.50 2.50 1.00 5.00 .........................................................................TCATGTACCTGAAGTAGCGCGC................................. 22 2 32.50 7.00 22.00 0.50 3.00 ...........................................................................AGGTACCTGAAGTAGCGCGCG................................ 21 2 32.50 4.50 18.00 8.50 1.50 .........................................................................TCAGGTACCTGCAGTAGCGCGC................................. 22 2 32.00 15.00 1.00 5.50 10.50 .........................................................................TCAGGTACCTAAAGTAGCGCG.................................. 21 2 31.50 28.00 1.00 0.50 2.00 .........................................................................TCATGTACCTGAAGTAGCGCG.................................. 21 2 30.50 15.50 6.00 0.50 8.50 .........................................................................TCAGGTACATGAAGTAGCGCG.................................. 21 2 30.00 19.50 3.50 2.50 4.50 .........................................................................TCAGGTACCTGGAGTAGCGCGC................................. 22 2 29.50 19.00 3.50 3.00 4.00 .........................................................................TCAGGTACCTGAAGTAGCGCCCG................................ 23 2 29.00 14.00 9.50 4.50 1.00 .........................................................................TCAGGTACCTGAATTAGCGCG.................................. 21 2 29.00 16.00 0.50 0.50 12.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGC............................... 24 2 28.50 4.00 22.50 2.00 0.00 .........................................................................TCATGTACCTGAAGTAGCGCGCG................................ 23 2 28.50 8.50 17.00 2.00 1.00 .........................................................................TCAGGTACCTGAACTAGCGCG.................................. 21 2 27.00 14.50 0.50 0.50 11.50 .........................................................................TCAGGTACCTTAAGTAGCGCGC................................. 22 2 27.00 7.50 12.00 1.50 6.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGTTT............................. 26 2 26.50 4.00 22.50 0.00 0.00 .........................................................................TCAGGTACCTCAAGTAGCGCG.................................. 21 2 26.00 12.50 0.50 2.50 10.50 .........................................................................TAAGGTACCTGAAGTAGCGCGCG................................ 23 2 25.50 12.00 10.50 2.50 0.50 .........................................................................TCAGGTACCTGAGGTAGCGCG.................................. 21 2 25.00 16.50 0.00 1.00 7.50 .........................................................................TCAGGTACCTGCAGTAGCGCGCG................................ 23 2 25.00 15.50 4.00 4.50 1.00 .........................................................................TCAGGTACCTGAAGTACCGCGC................................. 22 2 25.00 7.50 3.00 9.50 5.00 .........................................................................TCAGGCACCTGAAGTAGCGCGCG................................ 23 2 24.50 5.00 3.00 16.00 0.50 .........................................................................TCAGTTACCTGAAGTAGCGCG.................................. 21 2 24.50 17.00 1.50 0.50 5.50 .........................................................................TCAGGTACCTGAAGTAGCACGC................................. 22 2 23.50 5.00 8.50 3.50 6.50 .........................................................................TCAGGTACCTGACGTAGCGCGC................................. 22 2 22.50 12.00 1.50 2.00 7.00 .........................................................................TCAGGTACCTGAAGTAGCCCG.................................. 21 2 22.50 3.50 0.00 3.00 16.00 .........................................................................TCAGGTACCTAAAGTAGCGCGC................................. 22 2 22.00 17.50 1.50 0.50 2.50 .........................................................................TCAGGTACCTGAAGTAGCGCGTA................................ 23 2 22.00 15.00 5.50 0.50 1.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCC................................ 23 2 21.50 9.00 4.50 3.50 4.50 .........................................................................TCAGGTACCTTAAGTAGCGCGCG................................ 23 2 21.50 6.50 10.00 1.00 4.00 .........................................................................TCAGGTACCTGAAGTAGCACG.................................. 21 2 21.50 13.00 1.00 1.50 6.00 .........................................................................TCAGGTACCTGACGTAGCGCGCG................................ 23 2 21.00 13.50 0.50 4.00 3.00 .........................................................................TCAGGTACCTGAAGTAGAGCGCG................................ 23 2 21.00 9.00 10.00 1.50 0.50 .........................................................................TCAGGTACCTGAAGTAGC..................................... 18 2 21.00 0.50 13.00 7.50 0.00 .........................................................................TCAGGTACCTGATGTAGCGCG.................................. 21 2 20.50 17.00 0.00 2.00 1.50 .........................................................................TCAGGTACCTGAAGGAGCGCG.................................. 21 2 20.00 2.00 0.00 1.50 16.50 .........................................................................TCAGGTACCTGAAGTAGCGT................................... 20 2 20.00 17.00 1.00 1.50 0.50 .........................................................................TCAGGTACCTGAAGGAGCGCGC................................. 22 2 20.00 2.50 3.00 8.00 6.50 .........................................................................TCAGGTACCTGAAGTAGAGCGC................................. 22 2 20.00 8.00 6.50 2.00 3.50 .........................................................................TCAGGGACCTGAAGTAGCGC................................... 20 2 19.50 3.00 0.00 7.00 9.50 .........................................................................TCAGGTACCTGAATTAGCGCGCG................................ 23 2 19.50 9.50 4.00 3.00 3.00 .........................................................................TCAGGTACATGAAGTAGCGCGC................................. 22 2 19.00 4.50 8.50 4.50 1.50

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396572:1689389-1689509 -	77.52	TGATGTTCCCCCGACTGTAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCT-CCATCTTCACCAT CCATGT-------ACTCCAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTT-TTGCA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCCGCCATATCCGACAT Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chr4_group1:4175726-4175840 +	65.74	TGATGTTCCCCCGACTGTAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCAT CCACCTTC-------TTGAAAGTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGGTTTTTTCACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTGCTAGACACGAACATCTGT-------GT Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body .........................................................................TCAGGTACCTGAAGTAGCGCG.................................. 21 2 5613.00 3612.00 1344.00 651.50 5.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCG................................ 23 2 4745.00 3852.50 70.50 819.50 2.50 .........................................................................TCAGGTACCTGAAGTAGCGCGC................................. 22 2 4691.00 3473.00 368.00 833.50 16.50 .........................................................................TCAGGTACCTGAAGTAGCGC................................... 20 2 963.00 595.50 193.00 173.50 1.00 .........................................................................TCAGGTACCTGAAGTAGCGCGT................................. 22 2 629.50 487.00 56.50 84.50 1.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCGT............................... 24 2 409.50 345.50 2.00 61.50 0.50 .........................................................................TCAGGTACCTGAAGTAGCGCGA................................. 22 2 205.50 46.50 156.00 3.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCG.................................... 19 2 140.00 38.00 14.00 88.00 0.00 ..................................CGCGCTAATCAGAGACCGGGGCT....................................................................... 23 2 107.50 68.00 8.50 29.00 2.00 ...........................................................................AGGTACCTGAAGTAGCGCGCG................................ 21 2 87.00 72.50 0.50 14.00 0.00 ...........................................................................AGGTACCTGAAGTAGCGCGC................................. 20 2 72.50 60.50 1.50 10.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGTT.............................. 25 2 51.00 45.00 0.50 5.50 0.00 ...........................................................................AGGTACCTGAAGTAGCGCG.................................. 19 2 50.50 32.00 16.00 2.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCC................................ 23 2 47.00 42.00 0.50 4.00 0.50 .........................................................................TCAGGTACCTGAAGTAGCGCGTT................................ 23 2 45.00 39.50 1.00 4.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGA............................... 24 2 36.00 29.50 4.50 2.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCT................................ 23 2 31.00 25.50 0.50 5.00 0.00 ..........................................................................CAGGTACCTGAAGTAGCGCGC................................. 21 2 31.00 26.50 1.50 2.50 0.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCA................................ 23 2 28.00 20.00 6.00 2.00 0.00 .........................................................................TCAGGGACCTGAAGTAGCGCG.................................. 21 2 22.50 0.50 16.50 5.50 0.00 ..........................................................................CAGGTACCTGAAGTAGCGCGCG................................ 22 2 22.00 19.00 0.00 3.00 0.00 .........................................................................TCAGGGACCTGAAGTAGCGCGC................................. 22 2 19.00 0.00 3.50 15.50 0.00 .........................................................................TCAGGTACCTGAAGTGGCGCGCG................................ 23 2 16.50 10.00 0.00 6.00 0.50 .........................................................................TCAGGTACCTGAAGTAGCGCGCTT............................... 24 2 15.50 14.00 0.50 1.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCCA............................... 24 2 15.00 14.50 0.00 0.50 0.00 .........................................................................TCAGGTACCTGCAGTAGCGCG.................................. 21 2 14.00 1.50 9.50 3.00 0.00 ..................................CGCGCTAATCAGAGACCGGG.......................................................................... 20 2 13.50 9.50 0.50 3.50 0.00 ..................................CGCGCTAATCAGAGACCGGGG......................................................................... 21 2 13.00 7.50 2.50 3.00 0.00 ..................................CGCGCTAATCAGAGACCGGGGC........................................................................ 22 2 12.50 6.50 2.00 3.50 0.50 .........................................................................TCAGGTACCTGAAGTAGCGCGTTT............................... 24 2 11.50 11.50 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGCAGCGCG.................................. 21 2 11.00 4.50 4.50 2.00 0.00 .........................................................................TCAGGCACCTGAAGTAGCGCG.................................. 21 2 10.00 2.50 4.50 3.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGC............................... 24 2 10.00 6.50 0.50 3.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCCC................................. 22 2 9.50 9.50 0.00 0.00 0.00 .........................................................................TCAGGTACCTGACGTAGCGCG.................................. 21 2 9.50 3.00 5.50 1.00 0.00 .........................................................................TCAGGTACCTGAAGTGGCGCG.................................. 21 2 9.50 5.00 1.00 3.50 0.00 .........................................................................TCAGGTACCTGGAGTAGCGCGC................................. 22 2 9.50 5.00 1.00 3.50 0.00 .........................................................................CCAGGTACCTGAAGTAGCGCG.................................. 21 2 9.00 7.00 1.50 0.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCA.................................. 21 2 8.50 3.50 3.00 2.00 0.00 .........................................................................TCAGGTACCTGAGGTAGCGCG.................................. 21 2 8.50 5.50 2.00 1.00 0.00 .........................................................................TCAGGTACATGAAGTAGCGCG.................................. 21 2 8.50 1.50 5.50 1.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCACG.................................. 21 2 8.00 3.00 3.00 2.00 0.00 .........................................................................TCGGGTACCTGAAGTAGCGCGC................................. 22 2 8.00 2.50 1.00 4.50 0.00 ...........................................................................AGGTACCTGAAGTAGCGCGCGT............................... 22 2 8.00 6.50 0.00 1.50 0.00 .........................................................................TCAGGTACCTGAAGTGGCGCGC................................. 22 2 8.00 7.50 0.00 0.50 0.00 ..........................................................................CAGGTACCTGAAGTAGCGCG.................................. 20 2 8.00 6.00 1.00 1.00 0.00 .........................................................................TCAGGCACCTGAAGTAGCGCGCG................................ 23 2 8.00 4.50 0.00 3.50 0.00 ..................................CGCGCTAATCAGAGACCGGGGT........................................................................ 22 2 7.50 6.50 0.00 1.00 0.00 .........................................................................TCAGGTACCTGAAGTCGCGCG.................................. 21 2 7.50 2.50 5.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCCCG................................ 23 2 7.50 7.00 0.00 0.50 0.00 .........................................................................TCAGGTACCTGGAGTAGCGCG.................................. 21 2 7.50 1.00 5.00 1.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCGT................................... 20 2 7.50 4.00 0.00 3.50 0.00 .........................................................................TCAGGTACCTGAAGTACCGCGCG................................ 23 2 7.00 5.00 0.50 1.50 0.00 .........................................................................TCAGGTACCTGTAGTAGCGCG.................................. 21 2 7.00 1.00 6.00 0.00 0.00 .........................................................................TAAGGTACCTGAAGTAGCGCG.................................. 21 2 7.00 1.00 4.50 1.50 0.00 .........................................................................TCAGTTACCTGAAGTAGCGCG.................................. 21 2 7.00 5.00 1.50 0.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCCCGC................................. 22 2 6.50 6.50 0.00 0.00 0.00 .........................................................................TCAGGAACCTGAAGTAGCGCG.................................. 21 2 6.50 0.50 4.50 1.50 0.00 .........................................................................TCAGGTACCTGAGGTAGCGCGCG................................ 23 2 6.50 6.00 0.00 0.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCC.................................. 21 2 6.50 5.50 0.50 0.50 0.00 .........................................................................TCAGGCACCTGAAGTAGCGCGC................................. 22 2 6.50 2.00 1.00 3.50 0.00 .........................................................................TCAGGTACCTGAAGTACCGCGC................................. 22 2 6.00 4.00 0.00 2.00 0.00 .........................................................................TCAGGTACCCGAAGTAGCGCGC................................. 22 2 6.00 4.00 0.00 2.00 0.00 .........................................................................TCAGGTACCTGAAGCAGCGCGC................................. 22 2 6.00 2.50 1.00 2.50 0.00 ...........................................................................AGGTACCTGAAGTAGCGC................................... 18 2 6.00 3.50 1.50 1.00 0.00 .........................................................................TCAGGGACCTGAAGTAGCGC................................... 20 2 6.00 0.00 2.50 3.50 0.00 .........................................................................TCAGGTACCTGAAGGAGCGCG.................................. 21 2 6.00 1.00 4.00 1.00 0.00 .........................................................................TCAGGTACCTGAAGTCGCGCGCG................................ 23 2 6.00 4.50 0.50 1.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCCCG.................................. 21 2 6.00 4.50 0.50 1.00 0.00 .........................................................................TCAGGGACCTGAAGTAGCGCGCG................................ 23 2 6.00 0.00 0.50 5.50 0.00 .........................................................................TCAGGTACCTGACGTAGCGCGCG................................ 23 2 6.00 2.00 0.00 4.00 0.00 .........................................................................TCAGGTACCTGCAGTAGCGCGC................................. 22 2 5.50 3.00 1.00 1.50 0.00 .........................................................................TCAGGTACCCGAAGTAGCGCGCG................................ 23 2 5.50 4.00 0.00 1.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCACGCG................................ 23 2 5.50 4.00 0.00 1.50 0.00 ...........................................................................AGGTACCTGAAGTAGCGCGT................................. 20 2 5.50 4.50 0.00 1.00 0.00 .........................................................................TCAGGTACCTGAAGTACCGCG.................................. 21 2 5.50 4.00 0.50 1.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGTA................................ 23 2 5.50 5.00 0.00 0.50 0.00 .........................................................................TCAGGTACCTGAAGCAGCGCGCG................................ 23 2 5.50 3.00 0.00 2.50 0.00 .........................................................................TCAGGTACCTGAAGTAGAGCG.................................. 21 2 5.00 1.50 2.50 1.00 0.00 .........................................................................TCAGGTACCTGAATTAGCGCGCG................................ 23 2 5.00 2.50 0.50 2.00 0.00 .........................................................................TCAGGTACCTGAAGAAGCGCGC................................. 22 2 5.00 2.50 0.00 2.50 0.00 .........................................................................CCAGGTACCTGAAGTAGCGCGC................................. 22 2 5.00 2.50 1.00 1.50 0.00 .........................................................................TCGGGTACCTGAAGTAGCGCGCG................................ 23 2 4.50 3.00 0.00 1.50 0.00 .........................................................................TCAGGTACCTGAATTAGCGCG.................................. 21 2 4.50 4.00 0.00 0.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCGCGTTT............................. 26 2 4.50 4.50 0.00 0.00 0.00 .........................................................................CCAGGTACCTGAAGTAGCGCGCG................................ 23 2 4.50 3.50 0.00 1.00 0.00 .........................................................................TCAGGTACCTGAAGTATCGCGC................................. 22 2 4.50 4.00 0.50 0.00 0.00 .........................................................................TCGGGTACCTGAAGTAGCGCG.................................. 21 2 4.50 3.00 1.50 0.00 0.00 .........................................................................TCAGGGACCTGAAGTAGCGCGA................................. 22 2 4.50 0.00 4.50 0.00 0.00 .........................................................................TCAGGTACCTGAGGTAGCGCGC................................. 22 2 4.50 2.00 0.00 2.00 0.50 .........................................................................TCAGGTACCTGAAGTAGTGCGCG................................ 23 2 4.50 3.50 0.00 1.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGTG.................................. 21 2 4.50 2.00 2.00 0.50 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCACG................................ 23 2 4.50 4.00 0.00 0.50 0.00 .........................................................................TCAGGTAACTGAAGTAGCGCGC................................. 22 2 4.50 2.00 0.50 2.00 0.00 .........................................................................TCAGCTACCTGAAGTAGCGCG.................................. 21 2 4.50 2.50 1.00 1.00 0.00 .........................................................................TCAxGTACCTGAAGTAGCGCG.................................. 20 2 4.50 4.50 0.00 0.00 0.00 ...........................................................................AGGTACCTGAAGTAGCGCGCT................................ 21 2 4.00 4.00 0.00 0.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCAC................................. 22 2 4.00 2.50 0.50 1.00 0.00 .........................................................................TCAGGTACCTGAAGTAGCGCT.................................. 21 2 4.00 2.00 1.50 0.50 0.00 ........................................................................CTCAGGTACCTGAAGTAGCGCG.................................. 22 2 4.00 3.00 0.50 0.50 0.00 .........................................................................TCAGGTGCCTGAAGTAGCGCGC................................. 22 2 4.00 2.50 0.00 1.50 0.00

droPer1 - 1 hit found