dme-mir-252- 12- and 20-way alignments

dme-mir-252	chr3R:9289941-9290033 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intron

Legend:

   mature strand at position 9289997-9290018
   star strand at position 9289953-9289974
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chr3R:9289926-9290048 -	GT-----------GTGCCGCCTACTTA-----------------------------------------------CCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAA------GAA
droSim1	chr3R_random:533427-533549 -	GT-----------GTGCCGTCTACTTA-----------------------------------------------CCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAA------GAA
droSec1	super_0:12715202-12715324 +	GT-----------GTGCCGTCTACTTA-----------------------------------------------CCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAA------GAA
droYak2	chr3R:13598006-13598135 -	GTGCTAGAT----GTACGATGTACTTA-----------------------------------------------CCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAA------GAA
droEre2	scaffold_4770:12350666-12350788 +	GT-----------GCTAGATGTACTTA-----------------------------------------------CCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAA------GAA
droAna3	scaffold_13340:1848657-1848829 -	GT-------------GCAGAGTACTTAGCCCCAACCATTGGTAAATATTGATTTTATACTTACATTACTTCCTGCGAAG-TCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAGCAAAATACAAGGAA
dp4	chr2:16736618-16736738 -	-T-----------ATCTTGTGCATTTT-----------------------------------------------GGCGGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAACAGTG------AAA
droPer1	super_0:3659180-3659300 +	-T-----------ATCTTGTGCATTTT-----------------------------------------------GGCGGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAACAGTG------AAA
droWil1	Unknown	GTTGAAAATTTGTAATTTATGCATTTT-----------------------------------------------CCAGATTTGCTTTACTAAGTACTAGTGCCGCAGGAGTTTGGTTCGTGTCCGTAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGACTTTACCTACTTAA------AAA
droVir3	scaffold_12855:2861518-2861618 +	T--------------------------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAAGCGACTAGTTTTCCACCAGCA------ACA
droMoj3	scaffold_6540:10349260-10349360 -	T--------------------------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGGTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATCAAAGCGACGAGTTTTTCAACAGCA------GCt
droGri2	scaffold_14906:3807818-3807919 -	T--------------------------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAGGCGACGAATTTTCCAACAATGT-----GCG

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chr3R:9289926-9290048 -	NA	GTG-------TGCCGCCTACTT----------------------------------------------------------AC-C-AAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAA-------A--AGAA
droSim1	chr3R_random:533427-533549 -	1	GTG-------TGCCGTCTACTT----------------------------------------------------------AC-C-AAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAA-------A--AGAA
droSec1	super_0:12715202-12715324 +	1	GTG-------TGCCGTCTACTT----------------------------------------------------------AC-C-AAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAA-------A--AGAA
droYak2	chr3R:13598006-13598135 -	1	GTGCTAGATGTACGATGTACTT----------------------------------------------------------AC-C-AAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAA-------A--AGAA
droEre2	scaffold_4770:12350666-12350788 +	1	GTG-------CTAGATGTACTT----------------------------------------------------------AC-C-AAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAA-------A--AGAA
droEug1	scf7180000409802:705185-705307 +	1	ATA-------TCGTGTCTACTT----------------------------------------------------------AC-C-AAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTGCAACAA-------A--GAAA
droBia1	scf7180000302402:2002521-2002644 -	1	TCC-------CAGTGCCCACTT----------------------------------------------------------AC-C-GAGCTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAAGTTGTCCACCGC-------A--AGTG
droTak1	scf7180000415380:69928-70047 -	1	GAG-------TGC---CTACTT----------------------------------------------------------AC-C-GAGCTCACTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCATCAG-------T--ATGA
droEle1	scf7180000491047:1912675-1912796 +	1	GTG-------TATCAGTTACTT----------------------------------------------------------AC-C-AAGTGCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAACAT-------T---GAA
droRho1	scf7180000778831:19479-19601 -	1	TGG-------CAGCTATTACTT----------------------------------------------------------AC-C-AAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAACAG-------T--GAAA
droFic1	scf7180000453906:210236-210357 +	1	GAG-------TG---ATTACTT----------------------------------------------------------AC-C-GAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCCTATCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGA-GTTGTCCATCAA-------TGAAGAA
droKik1	scf7180000302392:529160-529299 +	1	GCT-------T-------TCTTCCGAAAGGAAAATCCCAAGCCGAT----------------------------------GC-C-GAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GATGCCCAACCT-------G--CTAG
droAna3	scaffold_13340:1848657-1848824 -	1	GAG-------T-------ACTTAG-----------CCCCAACCATTGGTAAATATTGATTTTATACTTACATTA--CTTCCTGCGAAG-TCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAGCAAAATACA-A--GGAA
droBip1	scf7180000396712:2482763-2482924 +	1	GAG-------T-------ACTTAC-----------CCCAAACCAATGGTAAATATTGATTTTGTACTTAC-TTA--CTTCCTGCGAAG-TCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAGCGAAAT--------ACA
dp4	chr2:16736618-16736739 -	1	TA--------TCTTGTGCATTT----------------------------------------------------------TGGC--GGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG--GTGGTCCAACAG-------T--GAAA
droPer1	super_0:3659179-3659300 +	1	TA--------TCTTGTGCATTT----------------------------------------------------------TGGC--GGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG--GTGGTCCAACAG-------T--GAAA
droWil1	scaffold_181130:6363211-6363342 -	2	GAT-------GGATCAATACTT----------------------------------------------AC-TTGAAC--GAAGC--GTATTGCTTTACTAAGTACTAGTGCCGCAGGAGTTTGGTTCGTGTCCGTAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGA-CTTTACCTACTT-------A--AAAA
droVir3	scaffold_12855:2861518-2861626 +	2	T-----------------------------------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAAGCGACTA-GTTTTCCACCAGCA-ACAATTAGAAA
droMoj3	scaffold_6540:10349255-10349360 -	2	T-----------------------------------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGGTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATCAAAGCGACGA-GTTTTTCAACAGCA-GCA-A--TTAA
droGri2	scaffold_14906:3807816-3807948 -	1	TTG-------TGGCACTTACTT---------------------------------------------------GAGCTTGATGC--GTATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAGGCGACGA-ATTTTCCAACAATGT----G--CGAG

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

GT-----------GTGCCGCCTACTTA-----------------------------------------------CCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAA------GAA

Size

Hit Count

Total Norm

droSim1

GT-----------GTGCCGTCTACTTA-----------------------------------------------CCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAA------GAA	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
........................................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	6904.00	4129.00	1967.00	647.00	161.00
........................................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	1274.00	320.00	778.00	149.00	27.00
........................................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................	22	1	936.00	7.00	838.00	84.00	7.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	833.00	324.00	308.00	165.00	36.00
........................................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................	22	1	556.00	2.00	449.00	93.00	12.00
........................................................................................CTAAGTACTAGTGCCGCAGG...............................................................................	20	1	334.00	15.00	259.00	58.00	2.00
.........................................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................	21	1	213.00	60.00	123.00	27.00	3.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................	22	1	135.00	53.00	60.00	12.00	10.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................	23	1	115.00	49.00	52.00	12.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAG................................................................................	19	1	107.00	0.00	92.00	11.00	4.00
........................................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................	21	1	101.00	4.00	74.00	22.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................	24	1	90.00	61.00	20.00	5.00	4.00
........................................................................................CTAAGTACTAGTGCCGCAGGCG.............................................................................	22	1	75.00	73.00	0.00	2.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................	23	1	68.00	0.00	35.00	27.00	6.00
........................................................................................CTAAGTACTAGTGCCGCAGGATT............................................................................	23	1	49.00	0.00	42.00	6.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................	23	1	37.00	4.00	19.00	9.00	5.00
........................................................................................CTAAGTACTAGTGCCGCAGGGG.............................................................................	22	1	35.00	22.00	7.00	6.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	33.00	30.00	2.00	0.00	1.00
........................................................................................CTAAGTACTAGTTCCGCAGGAG.............................................................................	22	1	30.00	3.00	24.00	2.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................	21	1	29.00	0.00	28.00	1.00	0.00
........................................................................................CTAAGTACTAGGGCCGCAGGAG.............................................................................	22	1	27.00	19.00	7.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCCGCCGGAG.............................................................................	22	1	26.00	26.00	0.00	0.00	0.00
........................................................................................CTAAGTACTGGTGCCGCAGGAG.............................................................................	22	1	19.00	5.00	12.00	2.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	17.00	14.00	2.00	1.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................	23	1	16.00	9.00	6.00	0.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGTG.............................................................................	22	1	16.00	15.00	1.00	0.00	0.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................	22	1	16.00	16.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTCCCGCAGGAG.............................................................................	22	1	16.00	0.00	10.00	2.00	4.00
.........................................................................................TAAGTACTAGTGCCGCAGGAC.............................................................................	21	1	15.00	0.00	10.00	5.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGAG.............................................................................	22	1	15.00	13.00	1.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................	22	1	13.00	3.00	8.00	2.00	0.00
........................................................................................CTAAGTACTAGTGCCTCAGGAG.............................................................................	22	1	13.00	2.00	9.00	1.00	1.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................	22	1	11.00	3.00	7.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGT...............................................................................	20	1	11.00	0.00	10.00	1.00	0.00
........................................................................................CTAAGTACTAGTGACGCAGGAG.............................................................................	22	1	11.00	11.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGACT............................................................................	23	1	11.00	0.00	10.00	1.00	0.00
..............................................................................................................TTAGGTTCGTGTCCGCAATAC........................................................	21	1	11.00	0.00	10.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCTGCAGGAG.............................................................................	22	1	11.00	6.00	3.00	2.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGA..............................................................................	20	1	11.00	1.00	8.00	2.00	0.00
..........................................................................................AAGTACTAGTGCCGCAGGACT............................................................................	21	1	10.00	0.00	8.00	1.00	1.00
........................................................................................CTAAGTACTAGTGTCGCAGGAG.............................................................................	22	1	10.00	5.00	5.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCATGAG.............................................................................	22	1	10.00	10.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTCCCGCAGGAC.............................................................................	22	1	9.00	0.00	7.00	2.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGG............................................................................	22	1	9.00	0.00	4.00	4.00	1.00
.........................................................................................TAAGTACTAGTGCCGCAGGAT.............................................................................	21	1	9.00	0.00	9.00	0.00	0.00
........................................................................................CTAAGTACTATTGCCGCAGGA..............................................................................	21	1	8.00	0.00	5.00	3.00	0.00
........................................................................................CTAAGTACTGGTGCCGCAGGA..............................................................................	21	1	8.00	0.00	7.00	1.00	0.00
........................................................................................CTAAGTACTACTGCCGCAGGAG.............................................................................	22	1	8.00	3.00	4.00	1.00	0.00
........................................................................................CTAAGTACTACTGCCGCAGGA..............................................................................	21	1	8.00	0.00	8.00	0.00	0.00
...................................................................................................................................CTCCTGCTGCCCAAGTGCTTATT.................................	23	1	7.00	2.00	4.00	1.00	0.00
......................................................................................................................................CTGCTGCCCAAGTGCTTATTA................................	21	1	7.00	7.00	0.00	0.00	0.00
..............................................................................................................TTAGGTTCGTGTCCGCAATACCT......................................................	23	1	7.00	2.00	4.00	0.00	1.00
........................................................................................CTAAGTACCAGTGCCGCAGGAG.............................................................................	22	1	7.00	6.00	1.00	0.00	0.00
........................................................................................CTAAGTACTAGAGCCGCAGGAG.............................................................................	22	1	7.00	5.00	2.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCACGAG.............................................................................	22	1	7.00	5.00	2.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................	24	1	7.00	0.00	6.00	1.00	0.00
........................................................................................CTAAGTAATAGTGCCGCAGGAG.............................................................................	22	1	7.00	7.00	0.00	0.00	0.00
........................................................................................ATAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	7.00	7.00	0.00	0.00	0.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................	21	1	7.00	0.00	6.00	1.00	0.00
........................................................................................CTACGTACTAGTGCCGCAGGAG.............................................................................	22	1	7.00	7.00	0.00	0.00	0.00
........................................................................................CTAAGTGCTAGTGCCGCAGGAG.............................................................................	22	1	7.00	6.00	0.00	1.00	0.00
.......................................................................................GCTAAGTACTAGTGCCGCAGGAG.............................................................................	23	1	6.00	1.00	3.00	0.00	2.00
........................................................................................CTAAGTACTATTGCCGCAGGAG.............................................................................	22	1	6.00	1.00	1.00	3.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGCGT............................................................................	23	1	6.00	6.00	0.00	0.00	0.00
........................................................................................CTAAGAACTAGTGCCGCAGGAG.............................................................................	22	1	6.00	3.00	2.00	1.00	0.00
........................................................................................CTAAGTACTCGTGCCGCAGGAG.............................................................................	22	1	6.00	6.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCCGGA..............................................................................	21	1	6.00	6.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCAGCAGGAG.............................................................................	22	1	6.00	5.00	1.00	0.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGC............................................................................	22	1	6.00	0.00	4.00	1.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGTAG.............................................................................	22	1	6.00	6.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAAGAG.............................................................................	22	1	6.00	5.00	1.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCxCAGGAG.............................................................................	21	1	6.00	0.00	5.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCCACAGGAG.............................................................................	22	1	6.00	4.00	2.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................	21	1	5.00	0.00	4.00	1.00	0.00
........................................................................................CTAAGTACTAGTxCCGCAGGAG.............................................................................	21	1	5.00	0.00	5.00	0.00	0.00
........................................................................................CTAAGTACGAGTGCCGCAGGAG.............................................................................	22	1	5.00	5.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCA.................................................................................	18	1	5.00	0.00	3.00	2.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................	25	1	5.00	4.00	1.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................	21	1	5.00	0.00	5.00	0.00	0.00
........................................................................................CCAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	5.00	4.00	1.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGAAG.............................................................................	22	1	5.00	4.00	0.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAC................................................................................	19	1	5.00	0.00	4.00	1.00	0.00
........................................................................................TTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	5.00	5.00	0.00	0.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGAGT............................................................................	23	1	5.00	4.00	1.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCGGGAG.............................................................................	22	1	5.00	4.00	1.00	0.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGA..............................................................................	21	1	5.00	2.00	3.00	0.00	0.00
........................................................................................CTAAGTACTAGTACCGCAGGAG.............................................................................	22	1	5.00	1.00	3.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCCGCTGGAG.............................................................................	22	1	5.00	4.00	1.00	0.00	0.00
........................................................................................CTAAGTCCTAGTGCCGCAGGAG.............................................................................	22	1	5.00	5.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTTCCGCAGGAGT............................................................................	23	1	5.00	0.00	3.00	2.00	0.00
........................................................................................CTAAGTACTAGTGCCGTAGGAG.............................................................................	22	1	4.00	3.00	1.00	0.00	0.00
........................................................................................CTCAGTACTAGTGCCGCAGGAG.............................................................................	22	1	4.00	4.00	0.00	0.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGG...............................................................................	19	1	4.00	0.00	4.00	0.00	0.00
........................................................................................ATAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	4.00	4.00	0.00	0.00	0.00
..........................................................................................AAGTACTAGTGCCGCAGGAG.............................................................................	20	1	4.00	0.00	3.00	1.00	0.00
........................................................................................CTAAATACTAGTGCCGCAGGAG.............................................................................	22	1	4.00	3.00	0.00	1.00	0.00
........................................................................................CTAAGTACTAGTGACGAAGGAG.............................................................................	22	1	4.00	4.00	0.00	0.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................	23	1	4.00	4.00	0.00	0.00	0.00
........................................................................................CTAAGTACTxxTGCCGCAGGAGT............................................................................	21	1	4.00	0.00	1.00	1.00	2.00
........................................................................................CTAAGTACTAGGGCCGCAGGA..............................................................................	21	1	4.00	1.00	2.00	0.00	1.00
..............................................................................................................TTAGGTTCGTGTCCGCAATACC.......................................................	22	1	4.00	1.00	2.00	0.00	1.00

droSec1

GT-----------GTGCCGTCTACTTA-----------------------------------------------CCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAA------GAA	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
........................................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	141698.00	18643.00	15441.00	107614.00
........................................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	23802.00	2018.00	942.00	20842.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	11951.00	1085.00	412.00	10454.00
.........................................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................	21	1	2887.00	288.00	286.00	2313.00
........................................................................................CTAAGTACTAGTGCCGCAGG...............................................................................	20	1	2697.00	195.00	52.00	2450.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................	24	1	1847.00	214.00	40.00	1593.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................	22	1	975.00	80.00	55.00	840.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................	25	1	701.00	80.00	4.00	617.00
........................................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................	22	1	675.00	36.00	6.00	633.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................	23	1	650.00	39.00	16.00	595.00
........................................................................................CTAAGTACTAGTGCCGCAAGAG.............................................................................	22	1	332.00	165.00	6.00	161.00
........................................................................................CTAAGTACTAGTGCCGCACGAG.............................................................................	22	1	331.00	164.00	12.00	155.00
........................................................................................CTAAGTACTAGTGCCGCATGAG.............................................................................	22	1	329.00	104.00	8.00	217.00
........................................................................................CTAAGTACTAGTGCCGCAGGCG.............................................................................	22	1	312.00	46.00	32.00	234.00
........................................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................	21	1	286.00	15.00	1.00	270.00
.........................................................................................TAAGTACTAGTGCCGCAGGA..............................................................................	20	1	278.00	25.00	14.00	239.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................	23	1	264.00	25.00	22.00	217.00
........................................................................................CTAAGTACTAGTGCTGCAGGAG.............................................................................	22	1	253.00	21.00	93.00	139.00
........................................................................................CTAAGTACTAGCGCCGCAGGAG.............................................................................	22	1	247.00	59.00	22.00	166.00
........................................................................................CTAAGTACTAGTTCCGCAGGAG.............................................................................	22	1	245.00	47.00	15.00	183.00
........................................................................................CTAAGTACTAGTGCCTCAGGAG.............................................................................	22	1	239.00	18.00	8.00	213.00
........................................................................................CTAAGTACTACTGCCGCAGGAG.............................................................................	22	1	211.00	27.00	21.00	163.00
........................................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................	22	1	193.00	13.00	6.00	174.00
........................................................................................CTAAGTAATAGTGCCGCAGGAG.............................................................................	22	1	190.00	3.00	2.00	185.00
........................................................................................CTAAGTACTAGTGCCGCAGGGG.............................................................................	22	1	188.00	25.00	26.00	137.00
........................................................................................CTAAGTACTAGTCCCGCAGGAG.............................................................................	22	1	183.00	26.00	35.00	122.00
........................................................................................CTAAGTACTAGTGCCGCAGCAG.............................................................................	22	1	179.00	32.00	12.00	135.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................	23	1	170.00	14.00	12.00	144.00
........................................................................................CTAAGTACTxxTGCCGCAGGAG.............................................................................	20	1	166.00	20.00	20.00	126.00
........................................................................................CTAAGTACTATTGCCGCAGGAG.............................................................................	22	1	164.00	21.00	14.00	129.00
........................................................................................CTAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	161.00	32.00	15.00	114.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................	22	1	143.00	8.00	5.00	130.00
........................................................................................CTAAGTACTAGTGCCCCAGGAG.............................................................................	22	1	142.00	18.00	24.00	100.00
........................................................................................CTAAGTACTAGTGCCxCAGGAG.............................................................................	21	1	139.00	13.00	6.00	120.00
........................................................................................CTAAGTACTAGTGCCGCAG................................................................................	19	1	139.00	5.00	2.00	132.00
........................................................................................CTAAGAACTAGTGCCGCAGGAG.............................................................................	22	1	137.00	16.00	3.00	118.00
........................................................................................ATAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	133.00	1.00	1.00	131.00
........................................................................................CTAAGTACTAGTGCCACAGGAG.............................................................................	22	1	132.00	10.00	17.00	105.00
........................................................................................CTAAGTACTAGTGCCGCAGAAG.............................................................................	22	1	129.00	6.00	2.00	121.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................	21	1	127.00	7.00	1.00	119.00
........................................................................................CTAAGTACCAGTGCCGCAGGAG.............................................................................	22	1	120.00	13.00	10.00	97.00
........................................................................................CTAAGTACTAGTGCCGCGGGAG.............................................................................	22	1	116.00	19.00	14.00	83.00
........................................................................................CTAAGTACTGGTGCCGCAGGAG.............................................................................	22	1	115.00	20.00	13.00	82.00
........................................................................................CTAAGTACTAGTGCCGCAGTAG.............................................................................	22	1	114.00	7.00	6.00	101.00
........................................................................................CTAAGTACTAGTGTCGCAGGAG.............................................................................	22	1	113.00	7.00	58.00	48.00
........................................................................................CAAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	107.00	0.00	1.00	106.00
........................................................................................CTAAGTACTAGTGCCGTAGGAG.............................................................................	22	1	105.00	9.00	46.00	50.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTT....................................	19	1	98.00	5.00	1.00	92.00
........................................................................................CCAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	97.00	10.00	11.00	76.00
........................................................................................CTAGGTACTAGTGCCGCAGGAG.............................................................................	22	1	97.00	17.00	19.00	61.00
........................................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................	22	1	94.00	17.00	6.00	71.00
........................................................................................CTAAGTACTAGTxCCGCAGGAG.............................................................................	21	1	93.00	15.00	6.00	72.00
........................................................................................CTAAGTACTAGTGCAGCAGGAG.............................................................................	22	1	93.00	5.00	10.00	78.00
........................................................................................CTAAGTATTAGTGCCGCAGGAG.............................................................................	22	1	92.00	8.00	38.00	46.00
........................................................................................CTAAGTACAAGTGCCGCAGGAG.............................................................................	22	1	91.00	3.00	7.00	81.00
........................................................................................CTAAGTACTAGTGCCGCA.................................................................................	18	1	91.00	1.00	4.00	86.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................	21	1	89.00	4.00	13.00	72.00
........................................................................................CTAAGTACTAATGCCGCAGGAG.............................................................................	22	1	89.00	9.00	8.00	72.00
........................................................................................CTCAGTACTAGTGCCGCAGGAG.............................................................................	22	1	87.00	28.00	9.00	50.00
........................................................................................CTAAGTACTAGTACCGCAGGAG.............................................................................	22	1	80.00	10.00	7.00	63.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................	22	1	77.00	5.00	20.00	52.00
........................................................................................CTAAGTGCTAGTGCCGCAGGAG.............................................................................	22	1	77.00	11.00	16.00	50.00
........................................................................................CTAAGTACTAGTGCCGCCGGAG.............................................................................	22	1	75.00	7.00	10.00	58.00
........................................................................................CTAAGTACTAGGGCCGCAGGAG.............................................................................	22	1	72.00	22.00	7.00	43.00
........................................................................................TTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	69.00	8.00	29.00	32.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................	24	1	67.00	4.00	2.00	61.00
........................................................................................CTAAGTACTAGTGACGCAGGAG.............................................................................	22	1	65.00	4.00	4.00	57.00
........................................................................................CTAAGTACTAGTGCCGAAGGAG.............................................................................	22	1	65.00	6.00	9.00	50.00
........................................................................................CTAAGTACTAGTGCCGCAGT...............................................................................	20	1	59.00	5.00	1.00	53.00
........................................................................................CTGAGTACTAGTGCCGCAGGAG.............................................................................	22	1	58.00	9.00	8.00	41.00
........................................................................................CTAAGTACTAGTGCCTCAGGA..............................................................................	21	1	56.00	9.00	1.00	46.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................	20	1	56.00	0.00	1.00	55.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................	24	1	54.00	2.00	0.00	52.00
........................................................................................CTAACTACTAGTGCCGCAGGAG.............................................................................	22	1	54.00	7.00	5.00	42.00
........................................................................................CTAATTACTAGTGCCGCAGGAG.............................................................................	22	1	53.00	5.00	3.00	45.00
........................................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................	23	1	51.00	3.00	0.00	48.00
........................................................................................CTAAGTCCTAGTGCCGCAGGAG.............................................................................	22	1	51.00	6.00	6.00	39.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTAT..........................................................................	25	1	49.00	6.00	0.00	43.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTAA..........................................................................	25	1	48.00	4.00	0.00	44.00
........................................................................................CTAAGTACTAGTGCCGCCGGA..............................................................................	21	1	48.00	5.00	2.00	41.00
........................................................................................CTAAATACTAGTGCCGCAGGAG.............................................................................	22	1	48.00	7.00	3.00	38.00
........................................................................................CTACGTACTAGTGCCGCAGGAG.............................................................................	22	1	48.00	6.00	6.00	36.00
........................................................................................CTAAGTACTACTGCCGCAGGA..............................................................................	21	1	46.00	2.00	1.00	43.00
........................................................................................CTAAGTACTAGTTCCGCAGGA..............................................................................	21	1	45.00	5.00	1.00	39.00
........................................................................................CTAAGTACTAGTGCCGCAAGA..............................................................................	21	1	44.00	26.00	0.00	18.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTA..........................................................................	25	1	42.00	3.00	1.00	38.00
........................................................................................CTAAGTACTAGAGCCGCAGGAG.............................................................................	22	1	41.00	5.00	5.00	31.00
........................................................................................CTAAGTACTATTGCCGCAGGA..............................................................................	21	1	41.00	1.00	1.00	39.00
........................................................................................CTAAGTTCTAGTGCCGCAGGAG.............................................................................	22	1	40.00	4.00	15.00	21.00
........................................................................................CTAAGAACTAGTGCCGCAGGA..............................................................................	21	1	40.00	1.00	0.00	39.00
........................................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................	21	1	39.00	2.00	5.00	32.00
........................................................................................CTAAGTACTCGTGCCGCAGGAG.............................................................................	22	1	38.00	3.00	8.00	27.00
........................................................................................CTAAGTACTAGTGCCxCAGGA..............................................................................	20	1	38.00	1.00	0.00	37.00
..............................................................................................................TTAGGTTCGTGTCCGCAATACCT......................................................	23	1	37.00	13.00	17.00	7.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTTT.........................................................................	26	1	36.00	2.00	0.00	34.00
........................................................................................CTAAGTACTAGTGCCGCACGA..............................................................................	21	1	35.00	24.00	0.00	11.00
........................................................................................CTAAGTACTxxTGCCGCAGGA..............................................................................	19	1	35.00	0.00	1.00	34.00
........................................................................................CTAAGTACTAGTGCCGCTGGAG.............................................................................	22	1	35.00	3.00	15.00	17.00
........................................................................................CTAAGTACTAGCGCCGCAGGA..............................................................................	21	1	35.00	4.00	1.00	30.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................	23	1	34.00	1.00	7.00	26.00
........................................................................................CTAAGTAATAGTGCCGCAGGA..............................................................................	21	1	34.00	0.00	0.00	34.00

droYak2

GTGCTAGAT----GTACGATGTACTTA-----------------------------------------------CCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAA------GAA	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
........................................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	45525.00	4393.00	13086.00	2883.00	24234.00	929.00
........................................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	5075.00	328.00	1458.00	359.00	2716.00	214.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	1539.00	306.00	331.00	138.00	610.00	154.00
........................................................................................CTAAGTACTAGTGCCGCAGGCG.............................................................................	22	1	1159.00	39.00	148.00	3.00	965.00	4.00
.........................................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................	21	1	770.00	67.00	243.00	49.00	372.00	39.00
........................................................................................CTAAGTACTAGTGCCGCAGG...............................................................................	20	1	741.00	9.00	216.00	30.00	450.00	36.00
........................................................................................CTAAGTACTAGTGCCGCCGGAG.............................................................................	22	1	523.00	26.00	102.00	0.00	395.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	441.00	20.00	89.00	1.00	331.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................	22	1	420.00	1.00	9.00	5.00	59.00	346.00
........................................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................	22	1	324.00	0.00	26.00	7.00	68.00	223.00
........................................................................................CTAAGTACTAGTGCCGCAGGTG.............................................................................	22	1	296.00	12.00	42.00	0.00	242.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGTAG.............................................................................	22	1	254.00	3.00	35.00	6.00	210.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGAG.............................................................................	22	1	228.00	21.00	35.00	10.00	161.00	1.00
........................................................................................CTAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	211.00	15.00	44.00	7.00	144.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGGG.............................................................................	22	1	189.00	16.00	36.00	4.00	131.00	2.00
........................................................................................CTAAGTACTAGGGCCGCAGGAG.............................................................................	22	1	172.00	16.00	21.00	2.00	133.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................	22	1	162.00	42.00	30.00	4.00	48.00	38.00
........................................................................................CTAAGTACTAGTGCCGCATGAG.............................................................................	22	1	151.00	5.00	52.00	4.00	90.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGCAG.............................................................................	22	1	130.00	4.00	19.00	2.00	105.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................	24	1	117.00	37.00	16.00	18.00	39.00	7.00
........................................................................................CTAAGTACTAGTTCCGCAGGAG.............................................................................	22	1	116.00	2.00	41.00	13.00	54.00	6.00
........................................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................	21	1	115.00	0.00	36.00	2.00	56.00	21.00
........................................................................................CTAAGTACTAGTGACGCAGGAG.............................................................................	22	1	113.00	11.00	23.00	1.00	78.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGTG.............................................................................	22	1	106.00	1.00	18.00	0.00	87.00	0.00
........................................................................................CTAAGTACTAGTGCCGCACGAG.............................................................................	22	1	104.00	2.00	10.00	0.00	90.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................	22	1	95.00	4.00	37.00	4.00	45.00	5.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................	23	1	88.00	22.00	17.00	8.00	27.00	14.00
........................................................................................CTACGTACTAGTGCCGCAGGAG.............................................................................	22	1	80.00	4.00	20.00	0.00	56.00	0.00
........................................................................................ATAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	79.00	8.00	18.00	0.00	53.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAG................................................................................	19	1	78.00	0.00	18.00	2.00	27.00	31.00
........................................................................................CTAAGTACTAGTGCCGCCGGCG.............................................................................	22	1	77.00	2.00	12.00	0.00	63.00	0.00
........................................................................................CTAAGTACTCGTGCCGCAGGAG.............................................................................	22	1	76.00	1.00	13.00	0.00	60.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................	21	1	74.00	0.00	5.00	0.00	63.00	6.00
........................................................................................CTAAGTACTAGTGCAGCAGGAG.............................................................................	22	1	73.00	7.00	15.00	0.00	50.00	1.00
........................................................................................CTAAGTACTAGTGCCGCCGGA..............................................................................	21	1	71.00	1.00	20.00	0.00	50.00	0.00
........................................................................................CTCAGTACTAGTGCCGCAGGAG.............................................................................	22	1	68.00	4.00	5.00	0.00	59.00	0.00
........................................................................................CTAAGTACTAGTGCCGCGGGAG.............................................................................	22	1	67.00	2.00	11.00	2.00	52.00	0.00
........................................................................................CTAAGTACTAGTGCCTCAGGAG.............................................................................	22	1	63.00	2.00	9.00	4.00	45.00	3.00
........................................................................................CTAAGTACTAGTGCCGCAAGAG.............................................................................	22	1	62.00	7.00	35.00	1.00	19.00	0.00
........................................................................................CTAAGTACTAGTGCCGAAGGAG.............................................................................	22	1	60.00	4.00	7.00	1.00	48.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGA..............................................................................	21	1	56.00	2.00	9.00	1.00	44.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGA..............................................................................	20	1	54.00	5.00	18.00	7.00	21.00	3.00
........................................................................................CTAGGTACTAGTGCCGCAGGAG.............................................................................	22	1	52.00	9.00	9.00	0.00	34.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................	21	1	50.00	3.00	3.00	0.00	10.00	34.00
........................................................................................CTAAGTACTAGTGCCACAGGAG.............................................................................	22	1	50.00	3.00	13.00	2.00	30.00	2.00
........................................................................................CTAAGTACGAGTGCCGCAGGAG.............................................................................	22	1	48.00	0.00	6.00	1.00	40.00	1.00
........................................................................................CTAAGGACTAGTGCCGCAGGCG.............................................................................	22	1	45.00	3.00	3.00	0.00	39.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................	22	1	44.00	1.00	10.00	1.00	20.00	12.00
........................................................................................CTAAGTACTAGCGCCGCAGGA..............................................................................	21	1	44.00	2.00	7.00	3.00	31.00	1.00
........................................................................................CTAAGTACTAGTGCTGCAGGAG.............................................................................	22	1	44.00	2.00	13.00	5.00	24.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTT....................................	19	1	43.00	0.00	19.00	0.00	24.00	0.00
........................................................................................TTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	43.00	3.00	16.00	0.00	24.00	0.00
........................................................................................CGAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	43.00	3.00	6.00	0.00	34.00	0.00
........................................................................................CTAAGTACTAGAGCCGCAGGAG.............................................................................	22	1	41.00	6.00	8.00	1.00	26.00	0.00
........................................................................................CTGAGTACTAGTGCCGCAGGAG.............................................................................	22	1	40.00	2.00	10.00	1.00	26.00	1.00
........................................................................................CTAAGTACTAGTGCCGCTGGAG.............................................................................	22	1	39.00	1.00	7.00	0.00	31.00	0.00
........................................................................................CTAAGTACCAGTGCCGCAGGAG.............................................................................	22	1	39.00	4.00	9.00	2.00	23.00	1.00
........................................................................................CTAAGAACTAGTGCCGCAGGAG.............................................................................	22	1	38.00	9.00	0.00	0.00	29.00	0.00
........................................................................................CCAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	37.00	1.00	12.00	0.00	24.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGAAG.............................................................................	22	1	37.00	3.00	12.00	2.00	20.00	0.00
........................................................................................CTAAGTACTAGTACCGCAGGAG.............................................................................	22	1	36.00	1.00	11.00	0.00	24.00	0.00
........................................................................................CTAAGTGCTAGTGCCGCAGGAG.............................................................................	22	1	36.00	2.00	10.00	1.00	23.00	0.00
........................................................................................CTAAGTACTGGTGCCGCAGGAG.............................................................................	22	1	35.00	4.00	19.00	0.00	11.00	1.00
........................................................................................CTAAGTACTAGTCCCGCAGGAG.............................................................................	22	1	34.00	1.00	1.00	7.00	19.00	6.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................	21	1	34.00	0.00	14.00	0.00	19.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................	23	1	34.00	6.00	8.00	0.00	16.00	4.00
........................................................................................CTAAGTACTATTGCCGCAGGAG.............................................................................	22	1	34.00	0.00	8.00	3.00	22.00	1.00
........................................................................................CTAAGTCCTAGTGCCGCAGGAG.............................................................................	22	1	33.00	0.00	6.00	2.00	25.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGGG.............................................................................	22	1	32.00	1.00	2.00	0.00	29.00	0.00
........................................................................................CTAAGCACTAGGGCCGCAGGAG.............................................................................	22	1	32.00	1.00	5.00	0.00	26.00	0.00
........................................................................................CTAAGTACTAGTGCCGTAGGAG.............................................................................	22	1	30.00	0.00	7.00	4.00	17.00	2.00
........................................................................................CTAAGTACTAGGGCCGCAGGA..............................................................................	21	1	27.00	0.00	4.00	0.00	22.00	1.00
........................................................................................CTAAATACTAGTGCCGCAGGAG.............................................................................	22	1	27.00	3.00	14.00	1.00	9.00	0.00
........................................................................................CTAAGTAATAGTGCCGCAGGAG.............................................................................	22	1	27.00	4.00	4.00	0.00	19.00	0.00
........................................................................................CTAAGTACTAGTGCCCCAGGAG.............................................................................	22	1	27.00	1.00	3.00	4.00	19.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................	23	1	27.00	3.00	3.00	0.00	2.00	19.00
........................................................................................CTAAGTACTAATGCCGCAGGAG.............................................................................	22	1	27.00	1.00	8.00	0.00	18.00	0.00
........................................................................................CTAAGTACTACTGCCGCAGGAG.............................................................................	22	1	26.00	1.00	7.00	0.00	18.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGA..............................................................................	21	1	26.00	0.00	7.00	0.00	19.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................	25	1	24.00	3.00	3.00	8.00	8.00	2.00
........................................................................................CTAAGTATTAGTGCCGCAGGAG.............................................................................	22	1	23.00	2.00	3.00	1.00	17.00	0.00
........................................................................................CTAAGTACTAGTGTCGCAGGAG.............................................................................	22	1	23.00	2.00	5.00	0.00	16.00	0.00
........................................................................................CTAAGTACTAGTGCCGCACGCG.............................................................................	22	1	23.00	1.00	4.00	0.00	18.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGT...............................................................................	20	1	22.00	0.00	8.00	0.00	11.00	3.00
........................................................................................CTAAGGACTAGCGCCGCAGGAG.............................................................................	22	1	22.00	0.00	4.00	0.00	18.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGT..............................................................................	21	1	22.00	0.00	5.00	0.00	17.00	0.00
........................................................................................CTAAGTACTAGTGCCGCCGGAGT............................................................................	23	1	22.00	3.00	3.00	0.00	16.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGCG.............................................................................	21	1	22.00	1.00	8.00	0.00	13.00	0.00
........................................................................................CTACGGACTAGTGCCGCAGGAG.............................................................................	22	1	22.00	0.00	5.00	0.00	17.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................	20	1	22.00	0.00	14.00	0.00	7.00	1.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................	23	1	22.00	6.00	7.00	3.00	6.00	0.00
........................................................................................CTAAGGACTAGGGCCGCAGGAG.............................................................................	22	1	21.00	0.00	2.00	0.00	19.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGCG.............................................................................	22	1	21.00	0.00	3.00	0.00	18.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGCG.............................................................................	22	1	21.00	2.00	4.00	0.00	15.00	0.00
........................................................................................CTAACTACTAGTGCCGCAGGAG.............................................................................	22	1	20.00	1.00	5.00	1.00	13.00	0.00
........................................................................................CTAAGGACTAGTGACGCAGGAG.............................................................................	22	1	19.00	0.00	3.00	0.00	16.00	0.00
........................................................................................CTAAGTACTAGTGCCGCCGGGG.............................................................................	22	1	19.00	1.00	4.00	0.00	14.00	0.00
........................................................................................CTAAGTACTAGTGACGCAGGA..............................................................................	21	1	19.00	1.00	7.00	0.00	11.00	0.00
........................................................................................CTAAGTACTAGTGCCGCA.................................................................................	18	1	18.00	0.00	6.00	1.00	11.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGACT............................................................................	23	1	18.00	0.00	0.00	0.00	1.00	17.00
........................................................................................CTACGTACTAGTGCCGCAGGA..............................................................................	21	1	17.00	0.00	4.00	0.00	13.00	0.00

droEre2

GT-----------GCTAGATGTACTTA-----------------------------------------------CCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAA------GAA	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
........................................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	232015.00	2277.00	36391.00	1586.00	191761.00
........................................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	29936.00	226.00	2526.00	54.00	27130.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	17687.00	185.00	828.00	37.00	16637.00
.........................................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................	21	1	4286.00	33.00	622.00	17.00	3614.00
........................................................................................CTAAGTACTAGTGCCGCATGAG.............................................................................	22	1	2910.00	20.00	114.00	8.00	2768.00
........................................................................................CTAAGTACTAGTGCCGCAGG...............................................................................	20	1	2437.00	9.00	339.00	2.00	2087.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................	22	1	2411.00	33.00	117.00	0.00	2261.00
........................................................................................CTAAGTACTAGTGCCGCAGTAG.............................................................................	22	1	2189.00	19.00	191.00	15.00	1964.00
........................................................................................ATAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	1900.00	2.00	25.00	1.00	1872.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................	24	1	1865.00	15.00	40.00	6.00	1804.00
........................................................................................CTAAGTACTAGTGCAGCAGGAG.............................................................................	22	1	1515.00	3.00	36.00	0.00	1476.00
........................................................................................CTAAGTACTAGTTCCGCAGGAG.............................................................................	22	1	1231.00	10.00	42.00	11.00	1168.00
........................................................................................CTAAGTACTAGTGCCGCAGGCG.............................................................................	22	1	1188.00	33.00	803.00	32.00	320.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................	23	1	1063.00	17.00	36.00	9.00	1001.00
........................................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................	22	1	1000.00	12.00	80.00	6.00	902.00
........................................................................................CTAAGTACTAGTGCCTCAGGAG.............................................................................	22	1	920.00	11.00	62.00	6.00	841.00
........................................................................................CTAAGTACTAGTGCCGAAGGAG.............................................................................	22	1	908.00	2.00	38.00	0.00	868.00
........................................................................................CTAAGTACTAGTGACGCAGGAG.............................................................................	22	1	892.00	4.00	56.00	2.00	830.00
........................................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................	22	1	796.00	1.00	85.00	4.00	706.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................	25	1	712.00	0.00	6.00	0.00	706.00
........................................................................................CTAAGTACTATTGCCGCAGGAG.............................................................................	22	1	618.00	7.00	31.00	7.00	573.00
........................................................................................CTAAGTACTAGCGCCGCAGGAG.............................................................................	22	1	549.00	14.00	102.00	4.00	429.00
........................................................................................CTAAGTAATAGTGCCGCAGGAG.............................................................................	22	1	509.00	1.00	12.00	0.00	496.00
........................................................................................CTAAGTACTAGTGCCGCCGGAG.............................................................................	22	1	472.00	20.00	267.00	13.00	172.00
........................................................................................CTAATTACTAGTGCCGCAGGAG.............................................................................	22	1	428.00	8.00	4.00	0.00	416.00
........................................................................................CTAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	401.00	5.00	85.00	1.00	310.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................	23	1	399.00	10.00	13.00	1.00	375.00
........................................................................................CTAAGTACTAGTGCCGCAGGGG.............................................................................	22	1	397.00	18.00	160.00	5.00	214.00
........................................................................................CTAAGTACTAGTGCTGCAGGAG.............................................................................	22	1	379.00	1.00	72.00	2.00	304.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................	23	1	361.00	4.00	19.00	5.00	333.00
........................................................................................CTAAGTACTAGTGCCGCATGA..............................................................................	21	1	345.00	3.00	2.00	0.00	340.00
........................................................................................CTAAGTACTAGTGCCACAGGAG.............................................................................	22	1	335.00	2.00	38.00	7.00	288.00
........................................................................................CTAAGTACTAGTGCCGCAGCAG.............................................................................	22	1	329.00	20.00	109.00	12.00	188.00
........................................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................	21	1	328.00	1.00	58.00	1.00	268.00
........................................................................................CTAAGTACTAGTGCCCCAGGAG.............................................................................	22	1	318.00	5.00	31.00	4.00	278.00
........................................................................................CTAAGTACTAGTGCCGCACGAG.............................................................................	22	1	313.00	11.00	72.00	5.00	225.00
........................................................................................CTAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	298.00	12.00	183.00	11.00	92.00
........................................................................................CTAAGTACTAGGGCCGCAGGAG.............................................................................	22	1	297.00	10.00	72.00	9.00	206.00
........................................................................................CTAGGTACTAGTGCCGCAGGAG.............................................................................	22	1	295.00	0.00	31.00	2.00	262.00
.........................................................................................TAAGTACTAGTGCCGCAGGA..............................................................................	20	1	291.00	2.00	26.00	0.00	263.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................	22	1	278.00	8.00	34.00	0.00	236.00
........................................................................................CTAAGTACTAGTGCCGCAAGAG.............................................................................	22	1	269.00	8.00	134.00	6.00	121.00
........................................................................................CTCAGTACTAGTGCCGCAGGAG.............................................................................	22	1	266.00	0.00	19.00	0.00	247.00
........................................................................................TTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	262.00	2.00	94.00	1.00	165.00
........................................................................................CTGAGTACTAGTGCCGCAGGAG.............................................................................	22	1	262.00	5.00	34.00	1.00	222.00
........................................................................................CTAAGTACTxxTGCCGCAGGAG.............................................................................	20	1	238.00	0.00	0.00	0.00	238.00
........................................................................................CTAAGTACTACTGCCGCAGGAG.............................................................................	22	1	238.00	2.00	14.00	5.00	217.00
........................................................................................CTAAGTACCAGTGCCGCAGGAG.............................................................................	22	1	236.00	1.00	23.00	3.00	209.00
........................................................................................CTAAGTACTAGTCCCGCAGGAG.............................................................................	22	1	228.00	3.00	14.00	3.00	208.00
........................................................................................CTAAGTACTAGTGCAGCAGGA..............................................................................	21	1	218.00	0.00	4.00	0.00	214.00
........................................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................	22	1	215.00	3.00	36.00	4.00	172.00
........................................................................................CTAAGTACTAGTGCCGCATGAGT............................................................................	23	1	214.00	3.00	3.00	1.00	207.00
........................................................................................CTAAGTACTAGTGCCGCGGGAG.............................................................................	22	1	212.00	1.00	46.00	1.00	164.00
........................................................................................ATAAGTACTAGTGCCGCAGGA..............................................................................	21	1	211.00	0.00	2.00	0.00	209.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................	22	1	210.00	7.00	14.00	0.00	189.00
........................................................................................CTAAGTACTAGTGCCGTAGGAG.............................................................................	22	1	208.00	1.00	21.00	1.00	185.00
........................................................................................CTAAGTACTAGTGCCGCAGTA..............................................................................	21	1	206.00	0.00	7.00	2.00	197.00
........................................................................................CTAAGTACTAGTTCCGCAGGA..............................................................................	21	1	199.00	2.00	2.00	0.00	195.00
........................................................................................CTAAGTACTAGTGCCGCA.................................................................................	18	1	199.00	0.00	2.00	0.00	197.00
........................................................................................CTAAGTACTAGTACCGCAGGAG.............................................................................	22	1	192.00	3.00	18.00	0.00	171.00
........................................................................................CTAAGTACTAGTGCCGCAGGTG.............................................................................	22	1	188.00	7.00	160.00	0.00	21.00
........................................................................................CCAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	187.00	3.00	23.00	4.00	157.00
........................................................................................CTAAGTACTAGTGCCGCAGTAGT............................................................................	23	1	175.00	1.00	4.00	1.00	169.00
........................................................................................CTAAGTACTGGTGCCGCAGGAG.............................................................................	22	1	174.00	2.00	38.00	2.00	132.00
........................................................................................CTAAGTACTAGAGCCGCAGGAG.............................................................................	22	1	165.00	1.00	35.00	4.00	125.00
........................................................................................CTAAGTACTAGTGTCGCAGGAG.............................................................................	22	1	163.00	1.00	16.00	1.00	145.00
........................................................................................CTAAGTGCTAGTGCCGCAGGAG.............................................................................	22	1	160.00	2.00	20.00	1.00	137.00
........................................................................................CTACGTACTAGTGCCGCAGGAG.............................................................................	22	1	155.00	1.00	39.00	0.00	115.00
........................................................................................ATAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	152.00	0.00	1.00	0.00	151.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTAT..........................................................................	25	1	145.00	0.00	2.00	0.00	143.00
........................................................................................CTAAGTACTAGTGCCGCAGAAG.............................................................................	22	1	144.00	6.00	49.00	3.00	86.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................	23	1	142.00	1.00	1.00	1.00	139.00
........................................................................................CTAAGTACTAGTGCCxCAGGAG.............................................................................	21	1	137.00	0.00	7.00	0.00	130.00
........................................................................................CTAAGTACTAGTGCCTCAGGA..............................................................................	21	1	135.00	1.00	1.00	0.00	133.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................	21	1	127.00	0.00	12.00	0.00	115.00
........................................................................................CTAAGTACTAATGCCGCAGGAG.............................................................................	22	1	124.00	1.00	14.00	0.00	109.00
........................................................................................CTAAGTACTAGTGCCGCAG................................................................................	19	1	118.00	2.00	18.00	1.00	97.00
........................................................................................CTAAGTACTATTGCCGCAGGA..............................................................................	21	1	116.00	1.00	2.00	1.00	112.00
........................................................................................CTAAGTATTAGTGCCGCAGGAG.............................................................................	22	1	114.00	2.00	12.00	1.00	99.00
........................................................................................CTAAGTACTAGTGACGCAGGA..............................................................................	21	1	113.00	0.00	5.00	0.00	108.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................	24	1	110.00	1.00	0.00	0.00	109.00
........................................................................................CTAAGTACTAGTGCAGCAGGAGT............................................................................	23	1	109.00	1.00	0.00	0.00	108.00
........................................................................................CTAAGTACTAGTGCCGAAGGA..............................................................................	21	1	109.00	0.00	2.00	0.00	107.00
........................................................................................CTAAGTACTAGTxCCGCAGGAG.............................................................................	21	1	108.00	0.00	1.00	0.00	107.00
........................................................................................CTAAGTACTCGTGCCGCAGGAG.............................................................................	22	1	106.00	0.00	34.00	2.00	70.00
........................................................................................CTAAGTACTAGTTCCGCAGGAGT............................................................................	23	1	104.00	1.00	0.00	0.00	103.00
........................................................................................CTAAGTACTAGCGCCGCAGGA..............................................................................	21	1	102.00	3.00	18.00	0.00	81.00
........................................................................................CTAAGTACTAGTGCCGCCGGA..............................................................................	21	1	101.00	5.00	27.00	0.00	69.00
........................................................................................CTAACTACTAGTGCCGCAGGAG.............................................................................	22	1	97.00	1.00	7.00	1.00	88.00
........................................................................................CTAAGTCCTAGTGCCGCAGGAG.............................................................................	22	1	94.00	0.00	16.00	1.00	77.00
........................................................................................CTAAGAACTAGTGCCGCAGGAG.............................................................................	22	1	91.00	1.00	29.00	3.00	58.00
........................................................................................CTTAGTACTAGTGCCGCAGGAG.............................................................................	22	1	88.00	0.00	5.00	1.00	82.00
........................................................................................CTAAGTACTAGTGACGCAGGAGT............................................................................	23	1	85.00	0.00	0.00	0.00	85.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................	21	1	85.00	1.00	8.00	0.00	76.00
........................................................................................CTAAGTACTAGTGCCGAAGGAGT............................................................................	23	1	83.00	0.00	3.00	0.00	80.00
........................................................................................CTAAGTACTAGTGCCTCAGGAGT............................................................................	23	1	81.00	3.00	0.00	0.00	78.00
........................................................................................CTAAGGACTAGTGCCGCAGGTG.............................................................................	22	1	81.00	5.00	76.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGAG..............................................................................	21	1	76.00	0.00	2.00	0.00	74.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTAA..........................................................................	25	1	71.00	0.00	0.00	0.00	71.00
........................................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................	21	1	70.00	1.00	34.00	0.00	35.00
........................................................................................CTAAGTACTAGTGCCGCTGGAG.............................................................................	22	1	69.00	1.00	21.00	0.00	47.00

droAna3

GT-------------GCAGAGTACTTAGCCCCAACCATTGGTAAATATTGATTTTATACTTACATTACTTCCTGCGAAG-TCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAGCAAAATACAAGGAA	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
........................................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	67676.00	5039.00	41630.00	20739.00	268.00
........................................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	12353.00	560.00	9501.00	2252.00	40.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	11930.00	194.00	11134.00	564.00	38.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................	24	1	2381.00	43.00	2289.00	42.00	7.00
.........................................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................	21	1	1904.00	82.00	1319.00	495.00	8.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................	22	1	1880.00	20.00	1773.00	81.00	6.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................	25	1	1464.00	23.00	1424.00	17.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGG...............................................................................	20	1	1179.00	107.00	614.00	456.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................	22	1	730.00	38.00	629.00	63.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGCG.............................................................................	22	1	597.00	60.00	162.00	374.00	1.00
........................................................................................CTAAGTACTAGTTCCGCAGGAG.............................................................................	22	1	512.00	39.00	451.00	21.00	1.00
........................................................................................CTAAGTACTAGTGCCGAAGGAG.............................................................................	22	1	439.00	23.00	380.00	36.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................	23	1	429.00	3.00	413.00	9.00	4.00
........................................................................................CTAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	413.00	0.00	22.00	387.00	4.00
........................................................................................CTAAGTACTAGTGCCGCAGTAG.............................................................................	22	1	408.00	16.00	301.00	88.00	3.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................	23	1	372.00	1.00	362.00	8.00	1.00
.........................................................................................TAAGTACTAGTGCCGCAGGA..............................................................................	20	1	357.00	10.00	266.00	81.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGTG.............................................................................	22	1	322.00	34.00	97.00	191.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGAG.............................................................................	22	1	304.00	28.00	75.00	200.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................	22	1	301.00	4.00	260.00	37.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................	23	1	300.00	20.00	249.00	31.00	0.00
........................................................................................ATAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	296.00	7.00	153.00	136.00	0.00
........................................................................................CTAAGTACTAGTGCCGCATGAG.............................................................................	22	1	295.00	14.00	221.00	55.00	5.00
........................................................................................CTAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	279.00	3.00	48.00	224.00	4.00
........................................................................................CTAAGTACTAGTGACGCAGGAG.............................................................................	22	1	261.00	22.00	175.00	64.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................	24	1	259.00	6.00	247.00	3.00	3.00
........................................................................................CTAAGTACTAGTGCCTCAGGAG.............................................................................	22	1	256.00	23.00	189.00	42.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGGG.............................................................................	22	1	217.00	14.00	65.00	137.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGCAG.............................................................................	22	1	168.00	5.00	21.00	141.00	1.00
........................................................................................CTAAGTACTAGGGCCGCAGGAG.............................................................................	22	1	167.00	11.00	11.00	142.00	3.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................	22	1	166.00	1.00	133.00	30.00	2.00
........................................................................................CTAAGTACTAGTGCAGCAGGAG.............................................................................	22	1	166.00	5.00	108.00	53.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................	21	1	165.00	7.00	93.00	65.00	0.00
........................................................................................CTGAGTACTAGTGCCGCAGGAG.............................................................................	22	1	164.00	1.00	142.00	21.00	0.00
........................................................................................TTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	152.00	2.00	19.00	131.00	0.00
........................................................................................CTAAGTACTAGTGCCGCACGAG.............................................................................	22	1	144.00	3.00	26.00	111.00	4.00
........................................................................................CTAAGTACTAGTTCCGCAGGAGT............................................................................	23	1	144.00	1.00	140.00	2.00	1.00
........................................................................................CTAAGTACTAGTGCTGCAGGAG.............................................................................	22	1	139.00	8.00	102.00	29.00	0.00
........................................................................................CTAAGTACTAGTGCCGCA.................................................................................	18	1	137.00	1.00	98.00	37.00	1.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................	22	1	137.00	1.00	126.00	8.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTTT.........................................................................	26	1	125.00	4.00	120.00	1.00	0.00
........................................................................................CTAAGTACTAGTTCCGCAGGA..............................................................................	21	1	123.00	4.00	116.00	3.00	0.00
..........................................................................................AAGTACTAGTGCCGCAGGAGTTT..........................................................................	23	1	114.00	2.00	110.00	2.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................	21	1	112.00	0.00	94.00	18.00	0.00
........................................................................................CTAAGTACTAGTGCCACAGGAG.............................................................................	22	1	111.00	18.00	52.00	41.00	0.00
........................................................................................CTAAGAACTAGTGCCGCAGGAG.............................................................................	22	1	110.00	4.00	11.00	95.00	0.00
..........................................................................................AAGTACTAGTGCCGCAGGAGT............................................................................	21	1	108.00	1.00	101.00	6.00	0.00
........................................................................................CTAAGTACTAGAGCCGCAGGAG.............................................................................	22	1	102.00	26.00	25.00	50.00	1.00
........................................................................................CTAAGTACTAGTGCCGAAGGA..............................................................................	21	1	91.00	1.00	83.00	7.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................	23	1	89.00	0.00	81.00	8.00	0.00
..........................................................................................AAGTACTAGTGCCGCAGGAGTT...........................................................................	22	1	89.00	2.00	82.00	4.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................	22	1	88.00	4.00	20.00	63.00	1.00
........................................................................................CTAAGTACTAGTGCCGAAGGAGT............................................................................	23	1	84.00	0.00	83.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGTAGT............................................................................	23	1	82.00	0.00	81.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCCGCCGGAG.............................................................................	22	1	81.00	2.00	6.00	71.00	2.00
........................................................................................CTAAGTACTATTGCCGCAGGAG.............................................................................	22	1	79.00	13.00	53.00	11.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................	21	1	75.00	2.00	41.00	32.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAG................................................................................	19	1	73.00	9.00	25.00	36.00	3.00
........................................................................................CTAAGTACTAGTACCGCAGGAG.............................................................................	22	1	73.00	25.00	30.00	18.00	0.00
........................................................................................CTAAGTACCAGTGCCGCAGGAG.............................................................................	22	1	73.00	5.00	43.00	25.00	0.00
........................................................................................CTAAGTACTAGTGCCGCGGGAG.............................................................................	22	1	70.00	3.00	39.00	28.00	0.00
........................................................................................CTAAGTACTAGTGTCGCAGGAG.............................................................................	22	1	69.00	5.00	50.00	14.00	0.00
........................................................................................CTAGGTACTAGTGCCGCAGGAG.............................................................................	22	1	68.00	7.00	43.00	18.00	0.00
........................................................................................CTAAGTACTACTGCCGCAGGAG.............................................................................	22	1	68.00	8.00	34.00	26.00	0.00
........................................................................................CTAAGTACTAGTGCCCCAGGAG.............................................................................	22	1	67.00	10.00	19.00	38.00	0.00
........................................................................................CCAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	67.00	6.00	43.00	18.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGTG.............................................................................	22	1	66.00	0.00	0.00	66.00	0.00
........................................................................................CTAAGTACTAGTCCCGCAGGAG.............................................................................	22	1	66.00	19.00	36.00	11.00	0.00
........................................................................................CTAAGTACTAGTGCCGTAGGAG.............................................................................	22	1	65.00	4.00	49.00	11.00	1.00
........................................................................................CTAAGTACTAGTGCCTCAGGAGT............................................................................	23	1	64.00	2.00	61.00	1.00	0.00
........................................................................................CTAAGTAATAGTGCCGCAGGAG.............................................................................	22	1	63.00	1.00	26.00	35.00	1.00
........................................................................................CTAAGTACTAGTTCCGCAGGAT.............................................................................	22	1	63.00	5.00	57.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCCGCATGAGT............................................................................	23	1	60.00	0.00	58.00	2.00	0.00
........................................................................................CTAAGTACTAGTGCCTCAGGA..............................................................................	21	1	60.00	4.00	53.00	2.00	1.00
........................................................................................CTAAGGACTAGTGCCGCAGGA..............................................................................	21	1	58.00	0.00	7.00	50.00	1.00
........................................................................................CTAAGTACTAGTGCCGCATGA..............................................................................	21	1	57.00	1.00	52.00	3.00	1.00
........................................................................................CTAAGTACTGGTGCCGCAGGAG.............................................................................	22	1	56.00	1.00	37.00	18.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGA..............................................................................	21	1	55.00	4.00	15.00	36.00	0.00
........................................................................................ATAAGTACTAGTGCCGCAGGA..............................................................................	21	1	53.00	1.00	30.00	22.00	0.00
........................................................................................CTACGTACTAGTGCCGCAGGAG.............................................................................	22	1	52.00	6.00	11.00	34.00	1.00
........................................................................................CTAAGTGCTAGTGCCGCAGGAG.............................................................................	22	1	51.00	2.00	35.00	14.00	0.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................	21	1	48.00	0.00	44.00	4.00	0.00
........................................................................................CTAAGTACTxxTGCCGCAGGAG.............................................................................	20	1	48.00	8.00	40.00	0.00	0.00
........................................................................................CGAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	48.00	10.00	4.00	34.00	0.00
........................................................................................CTAAGTACTAGTGACGCAGGAGT............................................................................	23	1	46.00	1.00	44.00	1.00	0.00
........................................................................................CTAAGTACTAGTGACGCAGGA..............................................................................	21	1	46.00	1.00	39.00	6.00	0.00
........................................................................................CTAAGTACTAGTGCCxCAGGAG.............................................................................	21	1	45.00	3.00	42.00	0.00	0.00
..........................................................................................AAGTACTAGTGCCGCAGGAG.............................................................................	20	1	45.00	3.00	28.00	14.00	0.00
........................................................................................CTAAGTACTAGTxCCGCAGGAG.............................................................................	21	1	45.00	8.00	37.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTA..........................................................................	25	1	43.00	0.00	43.00	0.00	0.00
........................................................................................CTAATTACTAGTGCCGCAGGAG.............................................................................	22	1	43.00	3.00	36.00	4.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................	21	1	43.00	3.00	24.00	16.00	0.00
........................................................................................GTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	43.00	2.00	8.00	33.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGCGT............................................................................	23	1	42.00	1.00	34.00	7.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGATT............................................................................	23	1	40.00	0.00	36.00	4.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGTA..............................................................................	21	1	40.00	0.00	31.00	9.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................	23	1	39.00	0.00	34.00	4.00	1.00
........................................................................................CTGAGTACTAGTGCCGCAGGAGT............................................................................	23	1	37.00	0.00	36.00	1.00	0.00
........................................................................................CTAAGTACGAGTGCCGCAGGAG.............................................................................	22	1	37.00	3.00	1.00	31.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTG..........................................................................	25	1	36.00	2.00	34.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTAT..........................................................................	25	1	35.00	0.00	33.00	2.00	0.00

dp4

-T-----------ATCTTGTGCATTTT-----------------------------------------------GGCGGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAACAGTG------AAA	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
........................................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	62405.00	5481.00	6780.00	50138.00	6.00
........................................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	8811.00	1084.00	789.00	6935.00	3.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	1819.00	271.00	437.00	1111.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGG...............................................................................	20	1	1527.00	143.00	34.00	1349.00	1.00
.........................................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................	21	1	1318.00	149.00	95.00	1070.00	4.00
........................................................................................CTAAGTACTAGTGCCGCAGGCG.............................................................................	22	1	554.00	5.00	102.00	447.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	426.00	0.00	76.00	350.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGAG.............................................................................	22	1	314.00	9.00	27.00	278.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................	22	1	291.00	44.00	74.00	173.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	254.00	2.00	20.00	232.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................	21	1	236.00	24.00	1.00	211.00	0.00
........................................................................................TTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	205.00	3.00	10.00	192.00	0.00
........................................................................................ATAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	205.00	3.00	26.00	176.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGGG.............................................................................	22	1	198.00	5.00	46.00	147.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGTG.............................................................................	22	1	191.00	0.00	39.00	152.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................	24	1	180.00	33.00	81.00	66.00	0.00
........................................................................................CTAAGTACTAGGGCCGCAGGAG.............................................................................	22	1	178.00	1.00	25.00	152.00	0.00
........................................................................................CTAAGTACTAGTGCCGCCGGAG.............................................................................	22	1	166.00	2.00	38.00	126.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGCAG.............................................................................	22	1	154.00	2.00	10.00	142.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................	22	1	151.00	10.00	15.00	126.00	0.00
........................................................................................CTCAGTACTAGTGCCGCAGGAG.............................................................................	22	1	136.00	1.00	8.00	127.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGTAG.............................................................................	22	1	122.00	2.00	8.00	112.00	0.00
........................................................................................CTAAGTACTAGTGCCGCACGAG.............................................................................	22	1	117.00	4.00	10.00	103.00	0.00
........................................................................................CTGAGTACTAGTGCCGCAGGAG.............................................................................	22	1	116.00	3.00	3.00	110.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................	22	1	112.00	1.00	5.00	95.00	11.00
........................................................................................CTAAGTACTAGTGACGCAGGAG.............................................................................	22	1	109.00	2.00	26.00	81.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGA..............................................................................	20	1	105.00	19.00	7.00	79.00	0.00
........................................................................................CTAAGTACTAGTGCCGAAGGAG.............................................................................	22	1	97.00	3.00	14.00	80.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAAGAG.............................................................................	22	1	92.00	2.00	13.00	77.00	0.00
........................................................................................CTAAGTACTAGAGCCGCAGGAG.............................................................................	22	1	91.00	4.00	10.00	77.00	0.00
........................................................................................CTAAGTACTAGTGCAGCAGGAG.............................................................................	22	1	85.00	0.00	18.00	67.00	0.00
........................................................................................CTAAGTACTAGTGCCGCGGGAG.............................................................................	22	1	76.00	7.00	12.00	57.00	0.00
........................................................................................CTAAGTACTAGTGCCACAGGAG.............................................................................	22	1	76.00	2.00	12.00	62.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................	23	1	75.00	8.00	27.00	40.00	0.00
........................................................................................CTAAGTACTAGTGCTGCAGGAG.............................................................................	22	1	75.00	7.00	8.00	60.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGAAG.............................................................................	22	1	74.00	4.00	3.00	67.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGTG.............................................................................	22	1	73.00	0.00	3.00	70.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGA..............................................................................	21	1	63.00	0.00	11.00	52.00	0.00
........................................................................................CTAAGAACTAGTGCCGCAGGAG.............................................................................	22	1	63.00	0.00	7.00	56.00	0.00
........................................................................................CTAAGTACTAGTGCCCCAGGAG.............................................................................	22	1	62.00	8.00	2.00	52.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGA..............................................................................	21	1	62.00	7.00	3.00	52.00	0.00
........................................................................................CTAAGTACTAGTGCCGCATGAG.............................................................................	22	1	61.00	2.00	11.00	48.00	0.00
........................................................................................CTAAGTACCAGTGCCGCAGGAG.............................................................................	22	1	59.00	4.00	5.00	50.00	0.00
........................................................................................CTAAGTACTAGTGCCGCTGGAG.............................................................................	22	1	58.00	2.00	5.00	51.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................	22	1	57.00	5.00	7.00	44.00	1.00
........................................................................................CTAGGTACTAGTGCCGCAGGAG.............................................................................	22	1	56.00	4.00	10.00	42.00	0.00
........................................................................................CTAAGGACTAGCGCCGCAGGAG.............................................................................	22	1	54.00	0.00	1.00	53.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................	21	1	54.00	1.00	4.00	49.00	0.00
........................................................................................CTACGTACTAGTGCCGCAGGAG.............................................................................	22	1	52.00	1.00	4.00	47.00	0.00
........................................................................................CTAAGTACTGGTGCCGCAGGAG.............................................................................	22	1	52.00	4.00	9.00	39.00	0.00
........................................................................................CTAAGTACTAGTGCCTCAGGAG.............................................................................	22	1	50.00	7.00	2.00	40.00	1.00
........................................................................................CTAAGTGCTAGTGCCGCAGGAG.............................................................................	22	1	49.00	3.00	9.00	37.00	0.00
........................................................................................CTAAGTAATAGTGCCGCAGGAG.............................................................................	22	1	48.00	2.00	7.00	39.00	0.00
........................................................................................CGAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	48.00	0.00	7.00	41.00	0.00
........................................................................................CTAAGTACTACTGCCGCAGGAG.............................................................................	22	1	48.00	8.00	3.00	37.00	0.00
........................................................................................CTAAGTACTAGTCCCGCAGGAG.............................................................................	22	1	44.00	8.00	2.00	34.00	0.00
........................................................................................CTAAGTACTAGTACCGCAGGAG.............................................................................	22	1	42.00	3.00	2.00	37.00	0.00
........................................................................................CCAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	42.00	2.00	3.00	37.00	0.00
........................................................................................CTAAGTACTAGTGTCGCAGGAG.............................................................................	22	1	41.00	1.00	11.00	29.00	0.00
........................................................................................CTAAGTACTAGTTCCGCAGGAG.............................................................................	22	1	39.00	6.00	5.00	28.00	0.00
........................................................................................CTAAGTACTAGTGCCGTAGGAG.............................................................................	22	1	38.00	5.00	6.00	27.00	0.00
........................................................................................ATAAGTACTAGTGCCGCAGGA..............................................................................	21	1	38.00	0.00	4.00	34.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAG................................................................................	19	1	37.00	2.00	0.00	35.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGA..............................................................................	21	1	37.00	1.00	4.00	32.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................	22	1	36.00	4.00	6.00	26.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................	23	1	35.00	2.00	19.00	14.00	0.00
........................................................................................CTAAGTACTAGTGCCGCCGGA..............................................................................	21	1	33.00	0.00	7.00	26.00	0.00
........................................................................................CTTAGTACTAGTGCCGCAGGAG.............................................................................	22	1	32.00	0.00	8.00	24.00	0.00
........................................................................................GTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	31.00	1.00	4.00	26.00	0.00
........................................................................................CTAAGTACTAATGCCGCAGGAG.............................................................................	22	1	31.00	3.00	7.00	21.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGCG.............................................................................	22	1	31.00	0.00	4.00	27.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGT...............................................................................	20	1	29.00	3.00	0.00	26.00	0.00
........................................................................................CTAAGTACTCGTGCCGCAGGAG.............................................................................	22	1	28.00	1.00	10.00	17.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................	25	1	28.00	12.00	6.00	10.00	0.00
........................................................................................CTAAGTACGAGTGCCGCAGGAG.............................................................................	22	1	26.00	0.00	4.00	22.00	0.00
........................................................................................CTAAGCACTAGGGCCGCAGGAG.............................................................................	22	1	25.00	0.00	0.00	25.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................	21	1	25.00	1.00	8.00	16.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................	23	1	25.00	3.00	7.00	15.00	0.00
........................................................................................CTAACTACTAGTGCCGCAGGAG.............................................................................	22	1	25.00	3.00	1.00	21.00	0.00
........................................................................................CTAAGTACTATTGCCGCAGGAG.............................................................................	22	1	23.00	8.00	2.00	13.00	0.00
........................................................................................CTAAGTACTAGGGCCGCAGGA..............................................................................	21	1	23.00	0.00	2.00	21.00	0.00
........................................................................................CTAAGCACTAGCGCCGCAGGAG.............................................................................	22	1	23.00	0.00	2.00	21.00	0.00
........................................................................................CTAAATACTAGTGCCGCAGGAG.............................................................................	22	1	22.00	1.00	7.00	14.00	0.00
........................................................................................TTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	22.00	0.00	1.00	21.00	0.00
........................................................................................CTAAGTATTAGTGCCGCAGGAG.............................................................................	22	1	21.00	2.00	5.00	14.00	0.00
........................................................................................CTAAGTACTAGTGCCGCCGGCG.............................................................................	22	1	21.00	0.00	6.00	15.00	0.00
........................................................................................CTCAGTACTAGTGCCGCAGGA..............................................................................	21	1	20.00	1.00	1.00	18.00	0.00
........................................................................................CTAAGTACTAGTGCCGCACGCG.............................................................................	22	1	20.00	0.00	2.00	18.00	0.00
........................................................................................CTAAGGACTAGGGCCGCAGGAG.............................................................................	22	1	19.00	0.00	3.00	16.00	0.00
........................................................................................CTAAGTACTAGTGCCGCA.................................................................................	18	1	19.00	1.00	0.00	18.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGCG.............................................................................	22	1	19.00	0.00	2.00	17.00	0.00
..........................................................................................AAGTACTAGTGCCGCAGGAG.............................................................................	20	1	19.00	4.00	1.00	14.00	0.00
........................................................................................CTAAGTACAAGTGCCGCAGGAG.............................................................................	22	1	19.00	1.00	0.00	18.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGCAG.............................................................................	22	1	18.00	0.00	0.00	18.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGG...............................................................................	19	1	18.00	2.00	2.00	14.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGGG.............................................................................	22	1	18.00	0.00	0.00	18.00	0.00
........................................................................................CTAAGTACTAGTGCAGCAGGA..............................................................................	21	1	17.00	0.00	2.00	15.00	0.00
........................................................................................CTAAGAACTAGTGCCGCAGGCG.............................................................................	22	1	17.00	0.00	0.00	17.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGCGT............................................................................	23	1	17.00	0.00	6.00	11.00	0.00
........................................................................................TTAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	16.00	0.00	1.00	15.00	0.00
........................................................................................CGAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	16.00	0.00	0.00	16.00	0.00

droPer1

-T-----------ATCTTGTGCATTTT-----------------------------------------------GGCGGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAACAGTG------AAA	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
........................................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	60936.00	3642.00	801.00	35791.00	20673.00	29.00
........................................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	9178.00	758.00	80.00	4787.00	3545.00	8.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	1592.00	261.00	54.00	785.00	488.00	4.00
........................................................................................CTAAGTACTAGTGCCGCAGG...............................................................................	20	1	1439.00	101.00	6.00	656.00	676.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................	21	1	1235.00	94.00	17.00	724.00	397.00	3.00
........................................................................................CTAAGTACTAGTGCCGCAGGCG.............................................................................	22	1	656.00	4.00	17.00	333.00	302.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	619.00	5.00	6.00	182.00	426.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	424.00	5.00	4.00	231.00	184.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGAG.............................................................................	22	1	321.00	7.00	4.00	151.00	159.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................	22	1	294.00	58.00	18.00	140.00	78.00	0.00
........................................................................................TTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	270.00	0.00	1.00	91.00	178.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGCAG.............................................................................	22	1	266.00	2.00	2.00	146.00	116.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGTG.............................................................................	22	1	261.00	0.00	4.00	53.00	204.00	0.00
........................................................................................ATAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	247.00	3.00	1.00	153.00	90.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................	22	1	237.00	5.00	0.00	93.00	77.00	62.00
........................................................................................CTAAGTACTAGTGCCGCAGGGG.............................................................................	22	1	219.00	2.00	5.00	95.00	117.00	0.00
........................................................................................CTAAGTACTAGGGCCGCAGGAG.............................................................................	22	1	214.00	3.00	2.00	51.00	158.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................	21	1	181.00	15.00	1.00	94.00	71.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................	22	1	173.00	12.00	3.00	96.00	62.00	0.00
........................................................................................CTAAGTACTAGTGCCGCACGAG.............................................................................	22	1	161.00	2.00	1.00	75.00	83.00	0.00
........................................................................................CTAAGTACTAGTGCCGCCGGAG.............................................................................	22	1	159.00	0.00	6.00	94.00	59.00	0.00
........................................................................................CTAAGAACTAGTGCCGCAGGAG.............................................................................	22	1	154.00	6.00	2.00	87.00	59.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGTAG.............................................................................	22	1	146.00	3.00	1.00	37.00	105.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGTG.............................................................................	22	1	144.00	0.00	2.00	33.00	109.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................	24	1	127.00	46.00	6.00	44.00	31.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGA..............................................................................	21	1	114.00	0.00	0.00	27.00	87.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGA..............................................................................	20	1	113.00	4.00	0.00	64.00	45.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAAGAG.............................................................................	22	1	104.00	1.00	1.00	83.00	19.00	0.00
........................................................................................CTAAGTACTAGTGACGCAGGAG.............................................................................	22	1	104.00	0.00	0.00	50.00	54.00	0.00
........................................................................................CTAAGTACTAGTGCCGAAGGAG.............................................................................	22	1	102.00	2.00	0.00	47.00	53.00	0.00
........................................................................................CTAAGTACTAGAGCCGCAGGAG.............................................................................	22	1	94.00	1.00	0.00	46.00	47.00	0.00
........................................................................................CTAAGTACTAGTGCCACAGGAG.............................................................................	22	1	89.00	6.00	0.00	45.00	38.00	0.00
........................................................................................CTAAGTACTAGTGCCGCATGAG.............................................................................	22	1	89.00	4.00	0.00	35.00	50.00	0.00
........................................................................................CTAAGTACTAGTGCAGCAGGAG.............................................................................	22	1	88.00	1.00	1.00	43.00	43.00	0.00
........................................................................................CTAAGTACTAGTGCCGCGGGAG.............................................................................	22	1	88.00	4.00	0.00	43.00	41.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGA..............................................................................	21	1	87.00	1.00	0.00	39.00	47.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGAAG.............................................................................	22	1	81.00	3.00	2.00	59.00	17.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................	22	1	75.00	4.00	1.00	33.00	33.00	4.00
........................................................................................CTAAGTACTAGTGCCGCAG................................................................................	19	1	71.00	6.00	1.00	27.00	37.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................	22	1	71.00	0.00	1.00	23.00	47.00	0.00
........................................................................................CTAAGTACTAGTGCCTCAGGAG.............................................................................	22	1	70.00	8.00	0.00	32.00	30.00	0.00
........................................................................................CTAGGTACTAGTGCCGCAGGAG.............................................................................	22	1	63.00	3.00	1.00	20.00	39.00	0.00
........................................................................................CTAAGTACTAGTGCTGCAGGAG.............................................................................	22	1	62.00	1.00	1.00	35.00	25.00	0.00
........................................................................................CGAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	61.00	0.00	0.00	14.00	47.00	0.00
........................................................................................CTAAGTACTAGTGCCCCAGGAG.............................................................................	22	1	60.00	2.00	0.00	26.00	32.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................	23	1	59.00	7.00	8.00	28.00	16.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGA..............................................................................	21	1	58.00	1.00	0.00	17.00	40.00	0.00
........................................................................................CTAAGTACCAGTGCCGCAGGAG.............................................................................	22	1	56.00	3.00	1.00	25.00	27.00	0.00
........................................................................................CTAAGTACTAGTGCCGCA.................................................................................	18	1	55.00	0.00	1.00	6.00	48.00	0.00
........................................................................................CTAAGTAATAGTGCCGCAGGAG.............................................................................	22	1	55.00	0.00	1.00	18.00	36.00	0.00
........................................................................................CTAAGTACTGGTGCCGCAGGAG.............................................................................	22	1	55.00	8.00	0.00	27.00	20.00	0.00
........................................................................................CTAAGGACTAGCGCCGCAGGAG.............................................................................	22	1	54.00	0.00	0.00	20.00	34.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................	21	1	54.00	0.00	0.00	24.00	30.00	0.00
........................................................................................TTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	52.00	0.00	0.00	15.00	37.00	0.00
........................................................................................ATAAGTACTAGTGCCGCAGGA..............................................................................	21	1	52.00	0.00	2.00	23.00	27.00	0.00
........................................................................................CCAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	52.00	3.00	2.00	23.00	24.00	0.00
........................................................................................CTAAGGACTAGGGCCGCAGGAG.............................................................................	22	1	50.00	0.00	0.00	13.00	37.00	0.00
........................................................................................CTGAGTACTAGTGCCGCAGGAG.............................................................................	22	1	47.00	0.00	1.00	20.00	26.00	0.00
........................................................................................CTAAGTACTAGTTCCGCAGGAG.............................................................................	22	1	47.00	5.00	0.00	22.00	20.00	0.00
........................................................................................CTAAGTACGAGTGCCGCAGGAG.............................................................................	22	1	45.00	0.00	0.00	6.00	39.00	0.00
........................................................................................CTAAGTACTAGTGCCGTAGGAG.............................................................................	22	1	43.00	3.00	0.00	23.00	17.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGT...............................................................................	20	1	40.00	4.00	0.00	13.00	23.00	0.00
........................................................................................GTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	39.00	0.00	0.00	10.00	29.00	0.00
........................................................................................CTAAGCACTAGCGCCGCAGGAG.............................................................................	22	1	39.00	0.00	0.00	18.00	21.00	0.00
........................................................................................CTAAGTACTAGTGCCGCCGGA..............................................................................	21	1	39.00	1.00	3.00	17.00	18.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................	21	1	37.00	1.00	1.00	15.00	20.00	0.00
........................................................................................CTAAGTACTACTGCCGCAGGAG.............................................................................	22	1	37.00	5.00	0.00	16.00	16.00	0.00
........................................................................................CTACGTACTAGTGCCGCAGGAG.............................................................................	22	1	36.00	0.00	1.00	17.00	18.00	0.00
........................................................................................CTAAGTATTAGTGCCGCAGGAG.............................................................................	22	1	35.00	2.00	1.00	20.00	12.00	0.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................	21	1	35.00	1.00	0.00	7.00	27.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................	21	1	34.00	0.00	0.00	17.00	17.00	0.00
........................................................................................CTAAGTACTAGTGCCGCTGGAG.............................................................................	22	1	34.00	0.00	0.00	11.00	23.00	0.00
........................................................................................CTAAGTACTAGTACCGCAGGAG.............................................................................	22	1	34.00	3.00	1.00	14.00	16.00	0.00
........................................................................................CTAAGAACTAGTGCCGCAGGA..............................................................................	21	1	34.00	0.00	0.00	20.00	14.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGCAG.............................................................................	22	1	33.00	0.00	0.00	10.00	23.00	0.00
........................................................................................CTAAGTACTAGGGCCGCAGGA..............................................................................	21	1	33.00	1.00	0.00	9.00	23.00	0.00
........................................................................................CTAAGTACTAGTCCCGCAGGAG.............................................................................	22	1	33.00	5.00	0.00	15.00	13.00	0.00
........................................................................................CTAAGTACTAGTGTCGCAGGAG.............................................................................	22	1	32.00	3.00	2.00	9.00	18.00	0.00
........................................................................................CTAAGTACTAGTGCCGTT.................................................................................	18	1	32.00	0.00	0.00	3.00	29.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGGG.............................................................................	22	1	31.00	0.00	0.00	7.00	24.00	0.00
........................................................................................CTAAGTGCTAGTGCCGCAGGAG.............................................................................	22	1	30.00	1.00	0.00	17.00	12.00	0.00
........................................................................................ATAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	29.00	0.00	1.00	4.00	24.00	0.00
........................................................................................CTAAGTACTATTGCCGCAGGAG.............................................................................	22	1	28.00	3.00	1.00	14.00	10.00	0.00
........................................................................................CTAAGAACTAGTGCCGCAGGCG.............................................................................	22	1	28.00	0.00	0.00	8.00	20.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGT..............................................................................	21	1	27.00	0.00	0.00	3.00	24.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGCG.............................................................................	22	1	27.00	0.00	0.00	17.00	10.00	0.00
........................................................................................CTAAGTACTAATGCCGCAGGAG.............................................................................	22	1	27.00	2.00	0.00	17.00	8.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................	23	1	26.00	2.00	0.00	12.00	12.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGCTG.............................................................................	22	1	26.00	0.00	1.00	6.00	19.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGCG.............................................................................	22	1	26.00	0.00	0.00	5.00	21.00	0.00
........................................................................................CTAAGCACTAGGGCCGCAGGAG.............................................................................	22	1	26.00	0.00	0.00	11.00	15.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGGG.............................................................................	22	1	26.00	0.00	0.00	6.00	20.00	0.00
........................................................................................CTAAGTACTCGTGCCGCAGGAG.............................................................................	22	1	25.00	0.00	1.00	13.00	11.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGCG.............................................................................	22	1	25.00	0.00	1.00	7.00	17.00	0.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................	22	1	25.00	0.00	1.00	8.00	16.00	0.00
........................................................................................CTAAGTACTAGTGCCGCACGCG.............................................................................	22	1	24.00	0.00	0.00	13.00	11.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................	23	1	24.00	4.00	6.00	9.00	5.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGGG.............................................................................	22	1	23.00	0.00	0.00	6.00	17.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTT....................................	19	1	23.00	0.00	0.00	1.00	22.00	0.00
........................................................................................CTAAGTACTAGTGCAGCAGGA..............................................................................	21	1	22.00	0.00	0.00	7.00	15.00	0.00
..........................................................................................AAGTACTAGTGCCGCAGGAG.............................................................................	20	1	22.00	0.00	1.00	12.00	9.00	0.00

droWil1

GTTGAAAATTTGTAATTTATGCATTTT-----------------------------------------------CCAGATTTGCTTTACTAAGTACTAGTGCCGCAGGAGTTTGGTTCGTGTCCGTAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGACTTTACCTACTTAA------AAA	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
........................................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	137170.00	2314.00	43557.00	89779.00	1520.00
........................................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	22571.00	546.00	3433.00	18004.00	588.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	16843.00	62.00	1855.00	14739.00	187.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................	22	1	3181.00	17.00	444.00	2620.00	100.00
.........................................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................	21	1	2907.00	40.00	622.00	2041.00	204.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................	24	1	2737.00	3.00	454.00	2264.00	16.00
........................................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................	22	1	2359.00	5.00	31.00	111.00	2212.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................	23	1	2052.00	5.00	354.00	1674.00	19.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................	23	1	1635.00	4.00	59.00	1543.00	29.00
........................................................................................CTAAGTACTAGTGCCGCAGG...............................................................................	20	1	1292.00	36.00	89.00	1090.00	77.00
........................................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................	22	1	863.00	9.00	44.00	801.00	9.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................	25	1	651.00	5.00	20.00	626.00	0.00
..........................................................................................AAGTACTAGTGCCGCAGGAGTT...........................................................................	22	1	591.00	2.00	91.00	486.00	12.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................	24	1	552.00	1.00	33.00	517.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................	22	1	543.00	0.00	68.00	114.00	361.00
........................................................................................CTAAGTACTAGCGCCGCAGGAG.............................................................................	22	1	433.00	5.00	121.00	305.00	2.00
........................................................................................CTAAGTACTAGTGCCGAAGGAG.............................................................................	22	1	417.00	0.00	75.00	342.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGCG.............................................................................	22	1	397.00	6.00	115.00	276.00	0.00
........................................................................................CTAAGTACTAGTGCAGCAGGAG.............................................................................	22	1	374.00	0.00	71.00	303.00	0.00
........................................................................................CTAAGTAATAGTGCCGCAGGAG.............................................................................	22	1	369.00	1.00	21.00	347.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGA..............................................................................	20	1	359.00	12.00	23.00	316.00	8.00
........................................................................................CTAAGTACTAGTGCCGCATGAG.............................................................................	22	1	329.00	0.00	135.00	193.00	1.00
........................................................................................CTAAGTACTAGTGCCTCAGGAG.............................................................................	22	1	319.00	1.00	111.00	194.00	13.00
........................................................................................ATAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	315.00	0.00	98.00	217.00	0.00
........................................................................................CTAAGTACTAGTGACGCAGGAG.............................................................................	22	1	314.00	1.00	55.00	257.00	1.00
........................................................................................CTAAGTACTAGTGCCACAGGAG.............................................................................	22	1	310.00	2.00	66.00	241.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGAAG.............................................................................	22	1	307.00	1.00	27.00	279.00	0.00
........................................................................................CTAAGTACTAGTTCCGCAGGAG.............................................................................	22	1	300.00	3.00	120.00	167.00	10.00
........................................................................................CTAAGTACTAGTGCCGCAAGAG.............................................................................	22	1	271.00	0.00	20.00	251.00	0.00
........................................................................................TTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	253.00	0.00	16.00	237.00	0.00
..........................................................................................AAGTACTAGTGCCGCAGGAGTTT..........................................................................	23	1	249.00	1.00	4.00	243.00	1.00
........................................................................................CTAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	247.00	2.00	100.00	142.00	3.00
........................................................................................CTAAGTACTAGAGCCGCAGGAG.............................................................................	22	1	236.00	3.00	26.00	206.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGGG.............................................................................	22	1	235.00	4.00	42.00	182.00	7.00
..........................................................................................AAGTACTAGTGCCGCAGGAGT............................................................................	21	1	203.00	0.00	7.00	186.00	10.00
........................................................................................CTAAGTACTAGTGCTGCAGGAG.............................................................................	22	1	197.00	6.00	56.00	131.00	4.00
........................................................................................CTAAGTACCAGTGCCGCAGGAG.............................................................................	22	1	181.00	7.00	59.00	115.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................	22	1	179.00	1.00	31.00	135.00	12.00
........................................................................................CTAAGTACTAGTGCCGCAGTAG.............................................................................	22	1	177.00	0.00	82.00	94.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGACT............................................................................	23	1	175.00	0.00	0.00	11.00	164.00
........................................................................................CTAAGTACTAGGGCCGCAGGAG.............................................................................	22	1	174.00	1.00	35.00	137.00	1.00
........................................................................................CTAAGTACTACTGCCGCAGGAG.............................................................................	22	1	166.00	3.00	43.00	117.00	3.00
........................................................................................CTAAGTACTAATGCCGCAGGAG.............................................................................	22	1	162.00	1.00	20.00	141.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................	23	1	158.00	1.00	18.00	132.00	7.00
........................................................................................CTAAGTACTAGTACCGCAGGAG.............................................................................	22	1	158.00	0.00	28.00	127.00	3.00
........................................................................................CTAAGTACTxxTGCCGCAGGAG.............................................................................	20	1	157.00	5.00	48.00	102.00	2.00
........................................................................................CTAAGTACTAGTCCCGCAGGAG.............................................................................	22	1	153.00	4.00	31.00	107.00	11.00
........................................................................................CTAAGTACTAGTGCCGCCGGAG.............................................................................	22	1	150.00	1.00	27.00	122.00	0.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................	22	1	145.00	1.00	56.00	87.00	1.00
........................................................................................CTAAGTACTATTGCCGCAGGAG.............................................................................	22	1	139.00	6.00	44.00	82.00	7.00
........................................................................................CTAAGTACTAGTGCCGCAGCAG.............................................................................	22	1	137.00	0.00	55.00	82.00	0.00
........................................................................................CTAAGTACTAGTGCCGTAGGAG.............................................................................	22	1	134.00	1.00	28.00	103.00	2.00
........................................................................................CTAAGTACTAGTGCCGCACGAG.............................................................................	22	1	131.00	1.00	44.00	86.00	0.00
........................................................................................CTAAGTACTAGTGCCGCGGGAG.............................................................................	22	1	130.00	2.00	41.00	87.00	0.00
........................................................................................CTAAGTATTAGTGCCGCAGGAG.............................................................................	22	1	127.00	0.00	13.00	114.00	0.00
........................................................................................CTAAGTACTAGTGCCCCAGGAG.............................................................................	22	1	124.00	2.00	37.00	82.00	3.00
........................................................................................CTAGGTACTAGTGCCGCAGGAG.............................................................................	22	1	122.00	0.00	35.00	85.00	2.00
........................................................................................CTAAGTACTGGTGCCGCAGGAG.............................................................................	22	1	120.00	0.00	26.00	92.00	2.00
........................................................................................CCAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	115.00	0.00	32.00	82.00	1.00
..............................................................................................................TTTGGTTCGTGTCCGTAATACC.......................................................	22	1	109.00	4.00	8.00	10.00	87.00
........................................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................	23	1	106.00	1.00	1.00	104.00	0.00
........................................................................................CTCAGTACTAGTGCCGCAGGAG.............................................................................	22	1	105.00	0.00	35.00	70.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGA..............................................................................	21	1	105.00	1.00	15.00	89.00	0.00
........................................................................................CTAAATACTAGTGCCGCAGGAG.............................................................................	22	1	104.00	1.00	8.00	95.00	0.00
........................................................................................CTAAGTGCTAGTGCCGCAGGAG.............................................................................	22	1	104.00	5.00	38.00	60.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAG................................................................................	19	1	99.00	1.00	6.00	55.00	37.00
........................................................................................CTAAGAACTAGTGCCGCAGGAG.............................................................................	22	1	98.00	1.00	15.00	82.00	0.00
........................................................................................CTAAGTACTAGTGCCGAAGGA..............................................................................	21	1	95.00	0.00	10.00	85.00	0.00
........................................................................................CTAAGTACTAGTGCCxCAGGAG.............................................................................	21	1	95.00	0.00	15.00	74.00	6.00
........................................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................	21	1	94.00	3.00	2.00	36.00	53.00
........................................................................................CTAAGTACTAGTGTCGCAGGAG.............................................................................	22	1	92.00	2.00	19.00	67.00	4.00
........................................................................................CTAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	92.00	3.00	22.00	65.00	2.00
..........................................................................................AAGTACTAGTGCCGCAGGAG.............................................................................	20	1	91.00	5.00	12.00	68.00	6.00
........................................................................................CTACGTACTAGTGCCGCAGGAG.............................................................................	22	1	86.00	2.00	14.00	70.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................	21	1	78.00	1.00	0.00	69.00	8.00
........................................................................................CTAAGTACTAGTxCCGCAGGAG.............................................................................	21	1	76.00	7.00	19.00	41.00	9.00
........................................................................................CTGAGTACTAGTGCCGCAGGAG.............................................................................	22	1	76.00	0.00	27.00	49.00	0.00
........................................................................................CTAAGTAATAGTGCCGCAGGA..............................................................................	21	1	75.00	0.00	1.00	74.00	0.00
..............................................................................................................TTTGGTTCGTGTCCGTAATACCT......................................................	23	1	74.00	0.00	20.00	2.00	52.00
........................................................................................CTAAGTACTAGTGCCGCCGGA..............................................................................	21	1	73.00	0.00	8.00	65.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................	21	1	71.00	0.00	1.00	69.00	1.00
........................................................................................CTAAGTAATAGTGCCGCAGGAGT............................................................................	23	1	67.00	0.00	2.00	65.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGAG..............................................................................	21	1	67.00	0.00	10.00	57.00	0.00
........................................................................................CTAAGTACTAGTGCAGCAGGA..............................................................................	21	1	66.00	0.00	8.00	58.00	0.00
........................................................................................CTAACTACTAGTGCCGCAGGAG.............................................................................	22	1	64.00	1.00	16.00	47.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGAGT............................................................................	23	1	61.00	1.00	6.00	54.00	0.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................	21	1	61.00	3.00	7.00	45.00	6.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTTT.........................................................................	26	1	59.00	0.00	0.00	59.00	0.00
........................................................................................CTAAGTACTAGTGCAGCAGGAGT............................................................................	23	1	58.00	0.00	6.00	52.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTA..........................................................................	25	1	57.00	0.00	3.00	54.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................	23	1	56.00	0.00	0.00	43.00	13.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................	24	1	55.00	0.00	2.00	52.00	1.00
........................................................................................ATAAGTACTAGTGCCGCAGGA..............................................................................	21	1	55.00	0.00	11.00	44.00	0.00
........................................................................................CTAAGTACTAGAGCCGCAGGA..............................................................................	21	1	55.00	1.00	2.00	51.00	1.00
........................................................................................CTAAGTACTAGAGCCGCAGGAGT............................................................................	23	1	54.00	0.00	3.00	51.00	0.00
........................................................................................TTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	54.00	0.00	2.00	51.00	1.00
........................................................................................CTAAGTACTCGTGCCGCAGGAG.............................................................................	22	1	53.00	0.00	11.00	42.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTTA..........................................................................	24	1	52.00	0.00	1.00	50.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGAAT............................................................................	23	1	52.00	0.00	0.00	50.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAAGA..............................................................................	21	1	52.00	0.00	2.00	49.00	1.00
........................................................................................CTAAGTACTAGTGCCGAAGGAGT............................................................................	23	1	52.00	0.00	3.00	49.00	0.00

droVir3

T--------------------------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAAGCGACTAGTTTTCCACCAGCA------ACA	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
........................................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	47716.00	9749.00	35446.00	1586.00	166.00	769.00
........................................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	5462.00	1089.00	4077.00	54.00	37.00	205.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	1415.00	238.00	1038.00	37.00	13.00	89.00
........................................................................................CTAAGTACTAGTGCCGCAGG...............................................................................	20	1	804.00	113.00	638.00	2.00	17.00	34.00
.........................................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................	21	1	703.00	111.00	551.00	17.00	5.00	19.00
........................................................................................CTAAGTACTAGTGCCGCAGGCG.............................................................................	22	1	540.00	29.00	476.00	32.00	1.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................	22	1	538.00	70.00	75.00	6.00	49.00	338.00
........................................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................	22	1	490.00	4.00	72.00	4.00	54.00	356.00
........................................................................................CTAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	465.00	9.00	455.00	1.00	0.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	387.00	2.00	372.00	11.00	0.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGCAG.............................................................................	22	1	233.00	6.00	214.00	12.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGTG.............................................................................	22	1	232.00	4.00	228.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGAG.............................................................................	22	1	230.00	22.00	204.00	4.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................	22	1	203.00	36.00	159.00	4.00	0.00	4.00
........................................................................................CTAAGTACTAGGGCCGCAGGAG.............................................................................	22	1	184.00	23.00	151.00	9.00	0.00	1.00
........................................................................................TTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	175.00	0.00	174.00	1.00	0.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGCAG.............................................................................	22	1	153.00	0.00	152.00	1.00	0.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGGTG.............................................................................	22	1	141.00	0.00	141.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGGG.............................................................................	22	1	132.00	10.00	112.00	5.00	1.00	4.00
........................................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................	21	1	127.00	11.00	102.00	1.00	3.00	10.00
........................................................................................CGAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	118.00	1.00	115.00	2.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................	23	1	116.00	20.00	61.00	9.00	6.00	20.00
........................................................................................CTAAGTACTAGTGCCGCACGAG.............................................................................	22	1	109.00	6.00	98.00	5.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCCGGAG.............................................................................	22	1	105.00	5.00	87.00	13.00	0.00	0.00
........................................................................................CTAAGTACTAGTGACGCAGGAG.............................................................................	22	1	104.00	3.00	99.00	2.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGTAG.............................................................................	22	1	100.00	4.00	81.00	15.00	0.00	0.00
........................................................................................ATAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	97.00	6.00	90.00	1.00	0.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGCG.............................................................................	22	1	94.00	0.00	93.00	1.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................	24	1	86.00	21.00	52.00	6.00	1.00	6.00
........................................................................................CTAAGTACTAGTGCCGCAG................................................................................	19	1	85.00	3.00	58.00	1.00	3.00	20.00
........................................................................................CTAAGTACTAGAGCCGCAGGAG.............................................................................	22	1	76.00	8.00	61.00	4.00	0.00	3.00
........................................................................................CTAAGTACTAGTGCCGCATGAG.............................................................................	22	1	69.00	3.00	58.00	8.00	0.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGA..............................................................................	21	1	69.00	0.00	69.00	0.00	0.00	0.00
........................................................................................CTAAGAACTAGTGCCGCAGGAG.............................................................................	22	1	69.00	4.00	62.00	3.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCACAGGAG.............................................................................	22	1	68.00	7.00	54.00	7.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGAAGGAG.............................................................................	22	1	66.00	13.00	53.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCAGCAGGAG.............................................................................	22	1	65.00	12.00	53.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTTCCGCAGGAG.............................................................................	22	1	62.00	22.00	24.00	11.00	3.00	2.00
........................................................................................CTAAGTACTAGTGCCGCGGGAG.............................................................................	22	1	58.00	6.00	51.00	1.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCCCAGGAG.............................................................................	22	1	57.00	13.00	40.00	4.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCTCAGGAG.............................................................................	22	1	57.00	14.00	31.00	6.00	1.00	5.00
........................................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................	21	1	56.00	2.00	14.00	0.00	12.00	28.00
........................................................................................CTAAGGACTAGTGCCGCAGGA..............................................................................	21	1	51.00	3.00	47.00	1.00	0.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................	22	1	49.00	6.00	35.00	0.00	3.00	5.00
.........................................................................................TAAGTACTAGTGCCGCAGGA..............................................................................	20	1	48.00	11.00	36.00	0.00	1.00	0.00
........................................................................................CTAGGTACTAGTGCCGCAGGAG.............................................................................	22	1	48.00	6.00	40.00	2.00	0.00	0.00
........................................................................................CTAAGTACCAGTGCCGCAGGAG.............................................................................	22	1	46.00	8.00	35.00	3.00	0.00	0.00
........................................................................................CTAAGTACTGGTGCCGCAGGAG.............................................................................	22	1	46.00	7.00	34.00	2.00	0.00	3.00
........................................................................................CCAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	45.00	1.00	40.00	4.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCTGCAGGAG.............................................................................	22	1	45.00	7.00	35.00	2.00	1.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................	23	1	43.00	2.00	24.00	5.00	4.00	8.00
........................................................................................CTAAGTACTAGTACCGCAGGAG.............................................................................	22	1	43.00	14.00	29.00	0.00	0.00	0.00
........................................................................................CTAAGTACTATTGCCGCAGGAG.............................................................................	22	1	43.00	15.00	19.00	7.00	0.00	2.00
........................................................................................CTAAGTACTAGTCCCGCAGGAG.............................................................................	22	1	43.00	15.00	22.00	3.00	0.00	3.00
........................................................................................CGAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	42.00	0.00	42.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGAAG.............................................................................	22	1	42.00	16.00	23.00	3.00	0.00	0.00
........................................................................................CTAAGTAATAGTGCCGCAGGAG.............................................................................	22	1	39.00	1.00	38.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGCCG.............................................................................	22	1	39.00	0.00	39.00	0.00	0.00	0.00
........................................................................................CTGAGTACTAGTGCCGCAGGAG.............................................................................	22	1	38.00	5.00	32.00	1.00	0.00	0.00
........................................................................................CTAAGTGCTAGTGCCGCAGGAG.............................................................................	22	1	38.00	3.00	34.00	1.00	0.00	0.00
........................................................................................CTAAGGACTAGGGCCGCAGGAG.............................................................................	22	1	36.00	0.00	36.00	0.00	0.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGTG.............................................................................	22	1	35.00	0.00	34.00	1.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................	21	1	34.00	0.00	33.00	0.00	1.00	0.00
........................................................................................CTAAGGACTAGCGCCGCAGGAG.............................................................................	22	1	34.00	0.00	33.00	1.00	0.00	0.00
........................................................................................CTAAGTACTACTGCCGCAGGAG.............................................................................	22	1	33.00	10.00	18.00	5.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCTGGAG.............................................................................	22	1	32.00	0.00	32.00	0.00	0.00	0.00
........................................................................................TTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	31.00	1.00	30.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAAGAG.............................................................................	22	1	31.00	3.00	22.00	6.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................	25	1	30.00	6.00	24.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGACT............................................................................	23	1	29.00	0.00	2.00	0.00	2.00	25.00
........................................................................................CTAAGTACTAGTGTCGCAGGAG.............................................................................	22	1	28.00	2.00	23.00	1.00	0.00	2.00
........................................................................................CTAAGCACTAGGGCCGCAGGAG.............................................................................	22	1	28.00	0.00	28.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGTAGGAG.............................................................................	22	1	28.00	4.00	22.00	1.00	0.00	1.00
........................................................................................CTAAGTACTAGGGCCGCAGGA..............................................................................	21	1	27.00	2.00	25.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCACGCG.............................................................................	22	1	27.00	0.00	26.00	1.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGATT............................................................................	23	1	25.00	0.00	5.00	0.00	1.00	19.00
........................................................................................CTAAGTATTAGTGCCGCAGGAG.............................................................................	22	1	25.00	2.00	22.00	1.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGCTG.............................................................................	22	1	24.00	0.00	24.00	0.00	0.00	0.00
........................................................................................CTAAGTACAAGTGCCGCAGGAG.............................................................................	22	1	24.00	4.00	20.00	0.00	0.00	0.00
........................................................................................ATAAGTACTAGTGCCGCAGGA..............................................................................	21	1	24.00	0.00	24.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAATGCCGCAGGAG.............................................................................	22	1	24.00	6.00	17.00	0.00	0.00	1.00
........................................................................................CTAAGGACTAGTGCCGCAGGCG.............................................................................	22	1	23.00	0.00	22.00	1.00	0.00	0.00
........................................................................................CTAAGAACTAGTGCCGCAGGCG.............................................................................	22	1	23.00	0.00	23.00	0.00	0.00	0.00
........................................................................................CTACGTACTAGTGCCGCAGGAG.............................................................................	22	1	23.00	1.00	22.00	0.00	0.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGGG.............................................................................	22	1	22.00	0.00	22.00	0.00	0.00	0.00
........................................................................................GTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	21.00	1.00	19.00	1.00	0.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGAGT............................................................................	23	1	21.00	0.00	21.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGCT.............................................................................	22	1	21.00	0.00	18.00	0.00	0.00	3.00
........................................................................................CTAAGTACGAGTGCCGCAGGAG.............................................................................	22	1	20.00	0.00	19.00	1.00	0.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGCG.............................................................................	21	1	20.00	0.00	20.00	0.00	0.00	0.00
........................................................................................CGAAGTACTAGTGCCGCAGGA..............................................................................	21	1	20.00	0.00	20.00	0.00	0.00	0.00
........................................................................................CTCAGTACTAGTGCCGCAGGAG.............................................................................	22	1	19.00	0.00	19.00	0.00	0.00	0.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................	21	1	19.00	1.00	7.00	0.00	5.00	6.00
........................................................................................CTAAGTACTAGTGCCGCAGT...............................................................................	20	1	19.00	0.00	15.00	0.00	0.00	4.00
........................................................................................CTAAGTACTAGTGACGCAGGA..............................................................................	21	1	19.00	0.00	19.00	0.00	0.00	0.00
........................................................................................CTAAGTCCTAGTGCCGCAGGAG.............................................................................	22	1	19.00	2.00	16.00	1.00	0.00	0.00
........................................................................................CTAAGCACTAGTGACGCAGGAG.............................................................................	22	1	18.00	0.00	18.00	0.00	0.00	0.00
........................................................................................CTAAGTACTAGCGCCGCAGGA..............................................................................	21	1	18.00	3.00	15.00	0.00	0.00	0.00
........................................................................................CTAAGTACTxxTGCCGCAGGAG.............................................................................	20	1	17.00	16.00	0.00	0.00	0.00	1.00
........................................................................................CTAAGTACTAGTGCCGCCGGA..............................................................................	21	1	17.00	2.00	15.00	0.00	0.00	0.00
........................................................................................CTAAGCACTAGTGCCGCACGAG.............................................................................	22	1	17.00	0.00	17.00	0.00	0.00	0.00

droMoj3

T--------------------------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGGTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATCAAAGCGACGAGTTTTTCAACAGCA------GCt	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
........................................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	74288.00	9232.00	33607.00	23988.00	7461.00
........................................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	8332.00	1183.00	3779.00	3103.00	267.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	1565.00	194.00	713.00	468.00	190.00
........................................................................................CTAAGTACTAGTGCCGCAGGCG.............................................................................	22	1	1065.00	6.00	282.00	644.00	133.00
.........................................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................	21	1	1031.00	114.00	483.00	347.00	87.00
........................................................................................CTAAGTACTAGTGCCGCAGG...............................................................................	20	1	681.00	80.00	321.00	273.00	7.00
........................................................................................CTAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	632.00	8.00	330.00	235.00	59.00
........................................................................................CTAAGTACTAGTGCCGCCGGAG.............................................................................	22	1	603.00	1.00	82.00	456.00	64.00
........................................................................................CTAAGTACTAGTGCCGCAGGTG.............................................................................	22	1	354.00	0.00	217.00	125.00	12.00
........................................................................................CTAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	327.00	8.00	195.00	102.00	22.00
........................................................................................CTAAGTACTAGCGCCGCAGGAG.............................................................................	22	1	293.00	7.00	173.00	93.00	20.00
........................................................................................CTAAGTACTAGTGCCGCAGGGG.............................................................................	22	1	242.00	6.00	121.00	70.00	45.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATC.................................	21	1	241.00	9.00	132.00	92.00	8.00
........................................................................................CTAAGTACTAGTGCCGCAGTAG.............................................................................	22	1	237.00	4.00	122.00	109.00	2.00
........................................................................................TTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	222.00	3.00	169.00	31.00	19.00
........................................................................................CTAAGTACTAGTGCCGCATGAG.............................................................................	22	1	216.00	14.00	69.00	127.00	6.00
........................................................................................CTAAGGACTAGTGCCGCAGGTG.............................................................................	22	1	200.00	0.00	131.00	69.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................	22	1	180.00	13.00	78.00	88.00	1.00
........................................................................................CTAAGTACTAGGGCCGCAGGAG.............................................................................	22	1	168.00	4.00	82.00	65.00	17.00
........................................................................................CTAAGTACTAGTGACGCAGGAG.............................................................................	22	1	148.00	9.00	75.00	50.00	14.00
........................................................................................CTAAGTACTGGTGCCGCAGGAG.............................................................................	22	1	145.00	14.00	70.00	51.00	10.00
........................................................................................CTAAGTACTAGTGCCGCAGCAG.............................................................................	22	1	143.00	3.00	101.00	35.00	4.00
........................................................................................CTACGTACTAGTGCCGCAGGAG.............................................................................	22	1	143.00	3.00	34.00	101.00	5.00
........................................................................................CTAAGTACTAGTGCCGCACGAG.............................................................................	22	1	131.00	2.00	70.00	52.00	7.00
........................................................................................ATAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	130.00	8.00	81.00	33.00	8.00
........................................................................................CTAAGTACTAGTGCCACAGGAG.............................................................................	22	1	124.00	13.00	56.00	47.00	8.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................	23	1	120.00	16.00	30.00	46.00	28.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATCA................................	22	1	114.00	5.00	49.00	43.00	17.00
........................................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................	22	1	114.00	7.00	41.00	57.00	9.00
........................................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................	21	1	108.00	10.00	51.00	46.00	1.00
........................................................................................CTAAGTACTAGTTCCGCAGGAG.............................................................................	22	1	99.00	25.00	16.00	53.00	5.00
........................................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................	22	1	97.00	6.00	57.00	30.00	4.00
........................................................................................CTAAGTACTAGTGCAGCAGGAG.............................................................................	22	1	96.00	8.00	58.00	24.00	6.00
........................................................................................CTAAGTACTAGTGCCGCAAGAG.............................................................................	22	1	96.00	3.00	21.00	62.00	10.00
........................................................................................CTAAGTACTAGTGCCGCCGGA..............................................................................	21	1	93.00	0.00	14.00	73.00	6.00
........................................................................................CCAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	90.00	4.00	33.00	43.00	10.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................	20	1	86.00	5.00	42.00	39.00	0.00
........................................................................................CTAAGTACTAGTGCCGCGGGAG.............................................................................	22	1	85.00	2.00	40.00	35.00	8.00
........................................................................................CTAAGTACTAGTGCCTCAGGAG.............................................................................	22	1	83.00	13.00	31.00	34.00	5.00
........................................................................................CTAAGTACTAGTGCCGCCGGCG.............................................................................	22	1	82.00	0.00	6.00	69.00	7.00
........................................................................................CTAAGTACTAGTGCCCCAGGAG.............................................................................	22	1	81.00	6.00	43.00	27.00	5.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................	24	1	81.00	21.00	25.00	23.00	12.00
........................................................................................CTAGGTACTAGTGCCGCAGGAG.............................................................................	22	1	81.00	3.00	36.00	34.00	8.00
........................................................................................CTAAGTACCAGTGCCGCAGGAG.............................................................................	22	1	77.00	3.00	42.00	28.00	4.00
........................................................................................CTAAGTACTAGTGCCGAAGGAG.............................................................................	22	1	76.00	5.00	45.00	18.00	8.00
........................................................................................CTAAGTACTAGAGCCGCAGGAG.............................................................................	22	1	75.00	7.00	41.00	20.00	7.00
........................................................................................CTAAGGACTAGTGCCGCAGGA..............................................................................	21	1	71.00	2.00	38.00	30.00	1.00
........................................................................................CTAAGTACTAGTGCTGCAGGAG.............................................................................	22	1	70.00	11.00	34.00	23.00	2.00
........................................................................................CTAAGTACTCGTGCCGCAGGAG.............................................................................	22	1	69.00	0.00	15.00	48.00	6.00
........................................................................................CTAAGAACTAGTGCCGCAGGAG.............................................................................	22	1	68.00	2.00	52.00	10.00	4.00
........................................................................................CTAAGTACTACTGCCGCAGGAG.............................................................................	22	1	66.00	9.00	38.00	15.00	4.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................	22	1	64.00	10.00	24.00	16.00	14.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTATC.................................	22	1	62.00	2.00	30.00	23.00	7.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................	23	1	62.00	14.00	22.00	21.00	5.00
........................................................................................CTGAGTACTAGTGCCGCAGGAG.............................................................................	22	1	61.00	3.00	25.00	29.00	4.00
........................................................................................CTAAGTACTAGTGCCGCAG................................................................................	19	1	56.00	7.00	28.00	21.00	0.00
........................................................................................CTAAGTACTAGTGCCGCAGAAG.............................................................................	22	1	55.00	3.00	22.00	27.00	3.00
........................................................................................CGAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	52.00	0.00	32.00	17.00	3.00
........................................................................................CTAAGTACTATTGCCGCAGGAG.............................................................................	22	1	51.00	18.00	18.00	15.00	0.00
........................................................................................CTAAGTAATAGTGCCGCAGGAG.............................................................................	22	1	49.00	6.00	24.00	14.00	5.00
.........................................................................................TAAGTACTAGTGCCGCAGGA..............................................................................	20	1	49.00	6.00	21.00	21.00	1.00
........................................................................................CTAAGTACTAGTACCGCAGGAG.............................................................................	22	1	48.00	2.00	29.00	14.00	3.00
........................................................................................CTAAGTACTAGTGCCGCTGGAG.............................................................................	22	1	48.00	3.00	27.00	14.00	4.00
........................................................................................CTAAGTACTAGTGCCGCA.................................................................................	18	1	48.00	0.00	28.00	20.00	0.00
........................................................................................CTAAGTGCTAGTGCCGCAGGAG.............................................................................	22	1	48.00	1.00	20.00	20.00	7.00
........................................................................................CTAAGTACTAGTGTCGCAGGAG.............................................................................	22	1	47.00	6.00	16.00	18.00	7.00
........................................................................................CTAAGGACTAGTGCCGCAGGCG.............................................................................	22	1	47.00	0.00	28.00	14.00	5.00
........................................................................................CTCAGTACTAGTGCCGCAGGAG.............................................................................	22	1	45.00	0.00	9.00	31.00	5.00
........................................................................................CTAAGTACTAGTCCCGCAGGAG.............................................................................	22	1	44.00	17.00	14.00	11.00	2.00
........................................................................................CTAAGCACTAGTGCCGCAGGA..............................................................................	21	1	42.00	0.00	26.00	16.00	0.00
........................................................................................CTAAGCACTAGGGCCGCAGGAG.............................................................................	22	1	42.00	0.00	28.00	10.00	4.00
........................................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................	21	1	41.00	1.00	22.00	16.00	2.00
........................................................................................CTAAGGACTAGCGCCGCAGGAG.............................................................................	22	1	41.00	0.00	29.00	10.00	2.00
........................................................................................CTAAGTATTAGTGCCGCAGGAG.............................................................................	22	1	39.00	3.00	19.00	16.00	1.00
........................................................................................CTAAGTACTAGTGCCGTAGGAG.............................................................................	22	1	39.00	4.00	17.00	15.00	3.00
........................................................................................CTAAGTACTAGCGCCGCAGGA..............................................................................	21	1	38.00	2.00	21.00	13.00	2.00
........................................................................................CTAAGGACTAGGGCCGCAGGAG.............................................................................	22	1	35.00	0.00	17.00	17.00	1.00
........................................................................................CTAAATACTAGTGCCGCAGGAG.............................................................................	22	1	34.00	1.00	9.00	15.00	9.00
........................................................................................CTAAGTACGAGTGCCGCAGGAG.............................................................................	22	1	34.00	0.00	25.00	7.00	2.00
........................................................................................CTAAGTACTAATGCCGCAGGAG.............................................................................	22	1	33.00	3.00	16.00	11.00	3.00
........................................................................................CTAAGTACTAGTGCCGCACGCG.............................................................................	22	1	33.00	0.00	17.00	16.00	0.00
........................................................................................GTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	32.00	3.00	25.00	3.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGCTG.............................................................................	22	1	30.00	0.00	19.00	9.00	2.00
........................................................................................TTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	28.00	1.00	21.00	6.00	0.00
........................................................................................CTAAGGACTAGTGCCGCAGCAG.............................................................................	22	1	28.00	0.00	14.00	14.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGCG.............................................................................	22	1	28.00	0.00	17.00	11.00	0.00
....................................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................	21	1	26.00	0.00	15.00	11.00	0.00
........................................................................................CTACGGACTAGTGCCGCAGGAG.............................................................................	22	1	25.00	0.00	5.00	19.00	1.00
........................................................................................CTACGTACTAGTGCCGCAGGA..............................................................................	21	1	25.00	0.00	2.00	23.00	0.00
........................................................................................CTAAGTACTAGGGCCGCAGGA..............................................................................	21	1	24.00	0.00	13.00	10.00	1.00
........................................................................................CTAAGGACTAGTGCCGCAGGGG.............................................................................	22	1	24.00	0.00	13.00	6.00	5.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................	25	1	24.00	4.00	10.00	9.00	1.00
........................................................................................CGAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	23.00	0.00	16.00	7.00	0.00
........................................................................................CTAAGCACTAGTGCCGCAGGGG.............................................................................	22	1	23.00	0.00	11.00	9.00	3.00
........................................................................................CTAAGTACTAGTGACGCAGGA..............................................................................	21	1	23.00	1.00	11.00	9.00	2.00
........................................................................................CTAAGTACTAGCGCCGCAGGCG.............................................................................	22	1	21.00	0.00	11.00	9.00	1.00
........................................................................................CTAAGTACTAGTGCCGCCGGGG.............................................................................	22	1	21.00	0.00	6.00	12.00	3.00
........................................................................................CTAAGGACTAGTGCCGCAGGT..............................................................................	21	1	21.00	0.00	13.00	8.00	0.00
.........................................................................................TAAGTACTAGTGCCGCAGGCG.............................................................................	21	1	21.00	0.00	3.00	18.00	0.00
........................................................................................ATAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	21.00	0.00	8.00	7.00	6.00
........................................................................................CTAAGTCCTAGTGCCGCAGGAG.............................................................................	22	1	20.00	0.00	6.00	10.00	4.00

droGri2

T--------------------------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAGGCGACGAATTTTCCAACAATGT-----GCG	Size	Hit Count	Total Norm	V109 Male body
........................................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	1359.00	1359.00
........................................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................	21	1	100.00	100.00
.........................................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................	21	1	31.00	31.00
........................................................................................CTAAGTACTAGTGCCGCCGGAG.............................................................................	22	1	15.00	15.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................	23	1	14.00	14.00
........................................................................................CTAAGTCCTAGTGCCGCAGGAG.............................................................................	22	1	10.00	10.00
........................................................................................CTAAGTACTAGTGCCGCAGG...............................................................................	20	1	10.00	10.00
........................................................................................CTAAGTACTAGTGCCGCGGGAG.............................................................................	22	1	8.00	8.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................	22	1	7.00	7.00
........................................................................................CTAAGTACTAGTGCCGCTGGAG.............................................................................	22	1	7.00	7.00
........................................................................................CTAAGTACTAGTTCCGCAGGAG.............................................................................	22	1	5.00	5.00
........................................................................................CTCAGTACTAGTGCCGCAGGAG.............................................................................	22	1	5.00	5.00
........................................................................................CTAAGTACAAGTGCCGCAGGAG.............................................................................	22	1	5.00	5.00
........................................................................................CTAAGTACTAGTGCCGCAAGAG.............................................................................	22	1	4.00	4.00
.........................................................................................TAAGTACTAGTGCCGCAGGA..............................................................................	20	1	4.00	4.00
........................................................................................CTAAGAACTAGTGCCGCAGGAG.............................................................................	22	1	4.00	4.00
........................................................................................CTGAGTACTAGTGCCGCAGGAG.............................................................................	22	1	3.00	3.00
........................................................................................CTAAGTACTAGTGCCTCAGGAG.............................................................................	22	1	3.00	3.00
........................................................................................CTAAGTACTAGTGCCGCACGAG.............................................................................	22	1	3.00	3.00
........................................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................	22	1	3.00	3.00
........................................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................	22	1	3.00	3.00
........................................................................................CTAAGGACTAGTGCCGCAGGAG.............................................................................	22	1	3.00	3.00
........................................................................................CTAAGCACTAGTGCCGCAGGAG.............................................................................	22	1	3.00	3.00
........................................................................................CTAAGTGCTAGTGCCGCAGGAG.............................................................................	22	1	3.00	3.00
........................................................................................CTAAGTACTAGTCCCGCAGGAG.............................................................................	22	1	2.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................	23	1	2.00	2.00
........................................................................................CTAAGTACTAGTGCCGAAGGAG.............................................................................	22	1	2.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................	22	1	2.00	2.00
........................................................................................CTAAGTACTGGTGCCGCAGGAG.............................................................................	22	1	2.00	2.00
........................................................................................CTAAGTACTAGTGCCACAGGAG.............................................................................	22	1	2.00	2.00
........................................................................................CTAAGTACTAGTGCCGCGGGA..............................................................................	21	1	2.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGCG.............................................................................	22	1	2.00	2.00
........................................................................................CTAAGTACTAGTGCCGTAGGAG.............................................................................	22	1	2.00	2.00
........................................................................................CTTAGTACTAGTGCCGCAGGAG.............................................................................	22	1	2.00	2.00
........................................................................................CTAAGTACCAGTGCCGCAGGAG.............................................................................	22	1	2.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGAAG.............................................................................	22	1	2.00	2.00
........................................................................................CTAAGTACTAGTGCCGCAGGGG.............................................................................	22	1	2.00	2.00
........................................................................................CTAAGTACTACTGCCGCAGGAG.............................................................................	22	1	2.00	2.00
........................................................................................CTAAGTACTAGCGCCGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTTAGG........................................................................	27	1	1.00	1.00
........................................................................................CTCAGTACTAGTGCCGCAGGA..............................................................................	21	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCCCCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCCGCATGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................	24	1	1.00	1.00
........................................................................................CTAAGTCCTAGTGACGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGCAG.............................................................................	22	1	1.00	1.00
........................................................................................CTTAGTACTAGTGCCTCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGCGCCGCTGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CCAAGTACTAATGCCGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTCGTGCCGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCTGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCCAGAGG...............................................................................	20	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCCGAAGG...............................................................................	20	1	1.00	1.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................	21	1	1.00	1.00
.....................................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................	22	1	1.00	1.00
........................................................................................CTAAATACTAGTGCCGCAGGAG.............................................................................	22	1	1.00	1.00
.........................................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................	23	1	1.00	1.00
........................................................................................CTAAGTACCAGTGCCGCAGGA..............................................................................	21	1	1.00	1.00
........................................................................................CTAAGTACTAxTGCCGCAGGAG.............................................................................	21	1	1.00	1.00
........................................................................................CTAAGTCCTAGTGCCGCAGGA..............................................................................	21	1	1.00	1.00
........................................................................................CCAAGTACTAGTGCCGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTGA..........................................................................	25	1	1.00	1.00
........................................................................................CTAAGTTCTAGTGCCGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTACGTACTAGTGCCGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTAATAGTGCCGCAGGA..............................................................................	21	1	1.00	1.00
...........................................................................................AGTACTAGTGCCGCAGGAG.............................................................................	19	1	1.00	1.00
........................................................................................CTAAGTACTAGTGTCGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGGGCCGCAGGAT.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCCGCAGGAGTG...........................................................................	24	1	1.00	1.00
.........................................................................................TATGTACTAGTGCCGCAGGAG.............................................................................	21	1	1.00	1.00
........................................................................................CTAAGTACTAGTxCCGCAGGAG.............................................................................	21	1	1.00	1.00
........................................................................................CTAAGCACTAGTCCCGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAxxGCCGCAGGAG.............................................................................	20	1	1.00	1.00
........................................................................................CTAAGTACGAGTGCCGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGCACTAGTGCCGCAGGAGT............................................................................	23	1	1.00	1.00
........................................................................................CTAAGTACTAATGCCGCAGGAG.............................................................................	22	1	1.00	1.00
..........................................................................................AAGTACTAGTGCCGCAGGAGT............................................................................	21	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCCACAGGAA.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTATTGCCGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGTGCTGCGGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTTCTAGTGCCACAGGAG.............................................................................	22	1	1.00	1.00
..........................................................................................AAGTACTAGTGCCGCAGGAGTTT..........................................................................	23	1	1.00	1.00
........................................................................................CTAAGTACTAGGGCCGCAGGAG.............................................................................	22	1	1.00	1.00
........................................................................................CTAAGTACTAGTGGCGCAGGAG.............................................................................	22	1	1.00	1.00

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image