Possible Orthologs for dme-mir-252

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3R_random:533427-533549 -	97.57	GTGTGCCGCCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA GTGTGCCGTCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..............................CTAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 6904.00 4129.00 1967.00 647.00 161.00 ..............................CTAAGTACTAGTGCCGCAGGA........................................................................ 21 1 1274.00 320.00 778.00 149.00 27.00 ..............................CTAAGTACTAGTGCCGCAGGAT....................................................................... 22 1 936.00 7.00 838.00 84.00 7.00 ..............................CTAAGTACTAGTGCCGCAGGAGT...................................................................... 23 1 833.00 324.00 308.00 165.00 36.00 ..............................CTAAGTACTAGTGCCGCAGGAC....................................................................... 22 1 556.00 2.00 449.00 93.00 12.00 ..............................CTAAGTACTAGTGCCGCAGG......................................................................... 20 1 334.00 15.00 259.00 58.00 2.00 ...............................TAAGTACTAGTGCCGCAGGAG....................................................................... 21 1 213.00 60.00 123.00 27.00 3.00 ...............................TAAGTACTAGTGCCGCAGGAGT...................................................................... 22 1 135.00 53.00 60.00 12.00 10.00 ..............................CTAAGTACTAGTGCCGCAGGAGA...................................................................... 23 1 115.00 49.00 52.00 12.00 2.00 ..............................CTAAGTACTAGTGCCGCAG.......................................................................... 19 1 107.00 0.00 92.00 11.00 4.00 ..............................CTAAGTACTAGTGCCGCAGGG........................................................................ 21 1 101.00 4.00 74.00 22.00 1.00 ..............................CTAAGTACTAGTGCCGCAGGAGTT..................................................................... 24 1 90.00 61.00 20.00 5.00 4.00 ..............................CTAAGTACTAGTGCCGCAGGCG....................................................................... 22 1 75.00 73.00 0.00 2.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGAGG...................................................................... 23 1 68.00 0.00 35.00 27.00 6.00 ..............................CTAAGTACTAGTGCCGCAGGATT...................................................................... 23 1 49.00 0.00 42.00 6.00 1.00 ..............................CTAAGTACTAGTGCCGCAGGAGC...................................................................... 23 1 37.00 4.00 19.00 9.00 5.00 ..............................CTAAGTACTAGTGCCGCAGGGG....................................................................... 22 1 35.00 22.00 7.00 6.00 0.00 ..............................CTAAGGACTAGTGCCGCAGGAG....................................................................... 22 1 33.00 30.00 2.00 0.00 1.00 ..............................CTAAGTACTAGTTCCGCAGGAG....................................................................... 22 1 30.00 3.00 24.00 2.00 1.00 ..............................CTAAGTACTAGTGCCGCAGGT........................................................................ 21 1 29.00 0.00 28.00 1.00 0.00 ..............................CTAAGTACTAGGGCCGCAGGAG....................................................................... 22 1 27.00 19.00 7.00 1.00 0.00 ..............................CTAAGTACTAGTGCCGCCGGAG....................................................................... 22 1 26.00 26.00 0.00 0.00 0.00 ..............................CTAAGTACTGGTGCCGCAGGAG....................................................................... 22 1 19.00 5.00 12.00 2.00 0.00 ..............................CTAAGCACTAGTGCCGCAGGAG....................................................................... 22 1 17.00 14.00 2.00 1.00 0.00 ...............................TAAGTACTAGTGCCGCAGGAGTT..................................................................... 23 1 16.00 9.00 6.00 0.00 1.00 ..............................CTAAGTACTAGTGCCGCAGGTG....................................................................... 22 1 16.00 15.00 1.00 0.00 0.00 ...........................................................................CCTGCTGCCCAAGTGCTTATTA.......................... 22 1 16.00 16.00 0.00 0.00 0.00 ..............................CTAAGTACTAGTCCCGCAGGAG....................................................................... 22 1 16.00 0.00 10.00 2.00 4.00 ...............................TAAGTACTAGTGCCGCAGGAC....................................................................... 21 1 15.00 0.00 10.00 5.00 0.00 ..............................CTAAGTACTAGCGCCGCAGGAG....................................................................... 22 1 15.00 13.00 1.00 1.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGAA....................................................................... 22 1 13.00 3.00 8.00 2.00 0.00 ..............................CTAAGTACTAGTGCCTCAGGAG....................................................................... 22 1 13.00 2.00 9.00 1.00 1.00 ..........................................................................TCCTGCTGCCCAAGTGCTTATT........................... 22 1 11.00 3.00 7.00 1.00 0.00 ..............................CTAAGTACTAGTGCCGCAGT......................................................................... 20 1 11.00 0.00 10.00 1.00 0.00 ..............................CTAAGTACTAGTGACGCAGGAG....................................................................... 22 1 11.00 11.00 0.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGACT...................................................................... 23 1 11.00 0.00 10.00 1.00 0.00 ....................................................TTAGGTTCGTGTCCGCAATAC.................................................. 21 1 11.00 0.00 10.00 1.00 0.00 ..............................CTAAGTACTAGTGCTGCAGGAG....................................................................... 22 1 11.00 6.00 3.00 2.00 0.00 ...............................TAAGTACTAGTGCCGCAGGA........................................................................ 20 1 11.00 1.00 8.00 2.00 0.00 ................................AAGTACTAGTGCCGCAGGACT...................................................................... 21 1 10.00 0.00 8.00 1.00 1.00 ..............................CTAAGTACTAGTGTCGCAGGAG....................................................................... 22 1 10.00 5.00 5.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCATGAG....................................................................... 22 1 10.00 10.00 0.00 0.00 0.00 ..............................CTAAGTACTAGTCCCGCAGGAC....................................................................... 22 1 9.00 0.00 7.00 2.00 0.00 ...............................TAAGTACTAGTGCCGCAGGAGG...................................................................... 22 1 9.00 0.00 4.00 4.00 1.00 ...............................TAAGTACTAGTGCCGCAGGAT....................................................................... 21 1 9.00 0.00 9.00 0.00 0.00 ..............................CTAAGTACTATTGCCGCAGGA........................................................................ 21 1 8.00 0.00 5.00 3.00 0.00 ..............................CTAAGTACTGGTGCCGCAGGA........................................................................ 21 1 8.00 0.00 7.00 1.00 0.00 ..............................CTAAGTACTACTGCCGCAGGAG....................................................................... 22 1 8.00 3.00 4.00 1.00 0.00 ..............................CTAAGTACTACTGCCGCAGGA........................................................................ 21 1 8.00 0.00 8.00 0.00 0.00 .........................................................................CTCCTGCTGCCCAAGTGCTTATT........................... 23 1 7.00 2.00 4.00 1.00 0.00 ............................................................................CTGCTGCCCAAGTGCTTATTA.......................... 21 1 7.00 7.00 0.00 0.00 0.00 ....................................................TTAGGTTCGTGTCCGCAATACCT................................................ 23 1 7.00 2.00 4.00 0.00 1.00 ..............................CTAAGTACCAGTGCCGCAGGAG....................................................................... 22 1 7.00 6.00 1.00 0.00 0.00 ..............................CTAAGTACTAGAGCCGCAGGAG....................................................................... 22 1 7.00 5.00 2.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCACGAG....................................................................... 22 1 7.00 5.00 2.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGAGAA..................................................................... 24 1 7.00 0.00 6.00 1.00 0.00 ..............................CTAAGTAATAGTGCCGCAGGAG....................................................................... 22 1 7.00 7.00 0.00 0.00 0.00 ..............................ATAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 7.00 7.00 0.00 0.00 0.00 ...........................................................................CCTGCTGCCCAAGTGCTTATT........................... 21 1 7.00 0.00 6.00 1.00 0.00 ..............................CTACGTACTAGTGCCGCAGGAG....................................................................... 22 1 7.00 7.00 0.00 0.00 0.00 ..............................CTAAGTGCTAGTGCCGCAGGAG....................................................................... 22 1 7.00 6.00 0.00 1.00 0.00 .............................GCTAAGTACTAGTGCCGCAGGAG....................................................................... 23 1 6.00 1.00 3.00 0.00 2.00 ..............................CTAAGTACTATTGCCGCAGGAG....................................................................... 22 1 6.00 1.00 1.00 3.00 1.00 ..............................CTAAGTACTAGTGCCGCAGGCGT...................................................................... 23 1 6.00 6.00 0.00 0.00 0.00 ..............................CTAAGAACTAGTGCCGCAGGAG....................................................................... 22 1 6.00 3.00 2.00 1.00 0.00 ..............................CTAAGTACTCGTGCCGCAGGAG....................................................................... 22 1 6.00 6.00 0.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCCGGA........................................................................ 21 1 6.00 6.00 0.00 0.00 0.00 ..............................CTAAGTACTAGTGCAGCAGGAG....................................................................... 22 1 6.00 5.00 1.00 0.00 0.00 ...............................TAAGTACTAGTGCCGCAGGAGC...................................................................... 22 1 6.00 0.00 4.00 1.00 1.00 ..............................CTAAGTACTAGTGCCGCAGTAG....................................................................... 22 1 6.00 6.00 0.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCAAGAG....................................................................... 22 1 6.00 5.00 1.00 0.00 0.00 ..............................CTAAGTACTAGTGCCxCAGGAG....................................................................... 21 1 6.00 0.00 5.00 1.00 0.00 ..............................CTAAGTACTAGTGCCACAGGAG....................................................................... 22 1 6.00 4.00 2.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCAGTT........................................................................ 21 1 5.00 0.00 4.00 1.00 0.00 ..............................CTAAGTACTAGTxCCGCAGGAG....................................................................... 21 1 5.00 0.00 5.00 0.00 0.00 ..............................CTAAGTACGAGTGCCGCAGGAG....................................................................... 22 1 5.00 5.00 0.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCA........................................................................... 18 1 5.00 0.00 3.00 2.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGAGTTT.................................................................... 25 1 5.00 4.00 1.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGC........................................................................ 21 1 5.00 0.00 5.00 0.00 0.00 ..............................CCAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 5.00 4.00 1.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCAGAAG....................................................................... 22 1 5.00 4.00 0.00 1.00 0.00 ..............................CTAAGTACTAGTGCCGCAC.......................................................................... 19 1 5.00 0.00 4.00 1.00 0.00 ..............................TTAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 5.00 5.00 0.00 0.00 0.00 ..............................CTAAGGACTAGTGCCGCAGGAGT...................................................................... 23 1 5.00 4.00 1.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCGGGAG....................................................................... 22 1 5.00 4.00 1.00 0.00 0.00 ..............................CTAAGGACTAGTGCCGCAGGA........................................................................ 21 1 5.00 2.00 3.00 0.00 0.00 ..............................CTAAGTACTAGTACCGCAGGAG....................................................................... 22 1 5.00 1.00 3.00 1.00 0.00 ..............................CTAAGTACTAGTGCCGCTGGAG....................................................................... 22 1 5.00 4.00 1.00 0.00 0.00 ..............................CTAAGTCCTAGTGCCGCAGGAG....................................................................... 22 1 5.00 5.00 0.00 0.00 0.00 ..............................CTAAGTACTAGTTCCGCAGGAGT...................................................................... 23 1 5.00 0.00 3.00 2.00 0.00 ..............................CTAAGTACTAGTGCCGTAGGAG....................................................................... 22 1 4.00 3.00 1.00 0.00 0.00 ..............................CTCAGTACTAGTGCCGCAGGAG....................................................................... 22 1 4.00 4.00 0.00 0.00 0.00 ...............................TAAGTACTAGTGCCGCAGG......................................................................... 19 1 4.00 0.00 4.00 0.00 0.00 ..............................ATAAGGACTAGTGCCGCAGGAG....................................................................... 22 1 4.00 4.00 0.00 0.00 0.00 ................................AAGTACTAGTGCCGCAGGAG....................................................................... 20 1 4.00 0.00 3.00 1.00 0.00 ..............................CTAAATACTAGTGCCGCAGGAG....................................................................... 22 1 4.00 3.00 0.00 1.00 0.00 ..............................CTAAGTACTAGTGACGAAGGAG....................................................................... 22 1 4.00 4.00 0.00 0.00 0.00 ..........................................................................TCCTGCTGCCCAAGTGCTTATTA.......................... 23 1 4.00 4.00 0.00 0.00 0.00 ..............................CTAAGTACTxxTGCCGCAGGAGT...................................................................... 21 1 4.00 0.00 1.00 1.00 2.00 ..............................CTAAGTACTAGGGCCGCAGGA........................................................................ 21 1 4.00 1.00 2.00 0.00 1.00 ....................................................TTAGGTTCGTGTCCGCAATACC................................................. 22 1 4.00 1.00 2.00 0.00 1.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_0:12715202-12715324 +	97.57	GTGTGCCGCCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA GTGTGCCGTCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..............................CTAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 141698.00 18643.00 15441.00 107614.00 ..............................CTAAGTACTAGTGCCGCAGGA........................................................................ 21 1 23802.00 2018.00 942.00 20842.00 ..............................CTAAGTACTAGTGCCGCAGGAGT...................................................................... 23 1 11951.00 1085.00 412.00 10454.00 ...............................TAAGTACTAGTGCCGCAGGAG....................................................................... 21 1 2887.00 288.00 286.00 2313.00 ..............................CTAAGTACTAGTGCCGCAGG......................................................................... 20 1 2697.00 195.00 52.00 2450.00 ..............................CTAAGTACTAGTGCCGCAGGAGTT..................................................................... 24 1 1847.00 214.00 40.00 1593.00 ...............................TAAGTACTAGTGCCGCAGGAGT...................................................................... 22 1 975.00 80.00 55.00 840.00 ..............................CTAAGTACTAGTGCCGCAGGAGTTT.................................................................... 25 1 701.00 80.00 4.00 617.00 ..............................CTAAGTACTAGTGCCGCAGGAA....................................................................... 22 1 675.00 36.00 6.00 633.00 ..............................CTAAGTACTAGTGCCGCAGGAGA...................................................................... 23 1 650.00 39.00 16.00 595.00 ..............................CTAAGTACTAGTGCCGCAAGAG....................................................................... 22 1 332.00 165.00 6.00 161.00 ..............................CTAAGTACTAGTGCCGCACGAG....................................................................... 22 1 331.00 164.00 12.00 155.00 ..............................CTAAGTACTAGTGCCGCATGAG....................................................................... 22 1 329.00 104.00 8.00 217.00 ..............................CTAAGTACTAGTGCCGCAGGCG....................................................................... 22 1 312.00 46.00 32.00 234.00 ..............................CTAAGTACTAGTGCCGCAGGT........................................................................ 21 1 286.00 15.00 1.00 270.00 ...............................TAAGTACTAGTGCCGCAGGA........................................................................ 20 1 278.00 25.00 14.00 239.00 ..............................CTAAGTACTAGTGCCGCAGGAGC...................................................................... 23 1 264.00 25.00 22.00 217.00 ..............................CTAAGTACTAGTGCTGCAGGAG....................................................................... 22 1 253.00 21.00 93.00 139.00 ..............................CTAAGTACTAGCGCCGCAGGAG....................................................................... 22 1 247.00 59.00 22.00 166.00 ..............................CTAAGTACTAGTTCCGCAGGAG....................................................................... 22 1 245.00 47.00 15.00 183.00 ..............................CTAAGTACTAGTGCCTCAGGAG....................................................................... 22 1 239.00 18.00 8.00 213.00 ..............................CTAAGTACTACTGCCGCAGGAG....................................................................... 22 1 211.00 27.00 21.00 163.00 ..............................CTAAGTACTAGTGCCGCAGGAT....................................................................... 22 1 193.00 13.00 6.00 174.00 ..............................CTAAGTAATAGTGCCGCAGGAG....................................................................... 22 1 190.00 3.00 2.00 185.00 ..............................CTAAGTACTAGTGCCGCAGGGG....................................................................... 22 1 188.00 25.00 26.00 137.00 ..............................CTAAGTACTAGTCCCGCAGGAG....................................................................... 22 1 183.00 26.00 35.00 122.00 ..............................CTAAGTACTAGTGCCGCAGCAG....................................................................... 22 1 179.00 32.00 12.00 135.00 ...............................TAAGTACTAGTGCCGCAGGAGTT..................................................................... 23 1 170.00 14.00 12.00 144.00 ..............................CTAAGTACTxxTGCCGCAGGAG....................................................................... 20 1 166.00 20.00 20.00 126.00 ..............................CTAAGTACTATTGCCGCAGGAG....................................................................... 22 1 164.00 21.00 14.00 129.00 ..............................CTAAGCACTAGTGCCGCAGGAG....................................................................... 22 1 161.00 32.00 15.00 114.00 ..........................................................................TCCTGCTGCCCAAGTGCTTATT........................... 22 1 143.00 8.00 5.00 130.00 ..............................CTAAGTACTAGTGCCCCAGGAG....................................................................... 22 1 142.00 18.00 24.00 100.00 ..............................CTAAGTACTAGTGCCxCAGGAG....................................................................... 21 1 139.00 13.00 6.00 120.00 ..............................CTAAGTACTAGTGCCGCAG.......................................................................... 19 1 139.00 5.00 2.00 132.00 ..............................CTAAGAACTAGTGCCGCAGGAG....................................................................... 22 1 137.00 16.00 3.00 118.00 ..............................ATAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 133.00 1.00 1.00 131.00 ..............................CTAAGTACTAGTGCCACAGGAG....................................................................... 22 1 132.00 10.00 17.00 105.00 ..............................CTAAGTACTAGTGCCGCAGAAG....................................................................... 22 1 129.00 6.00 2.00 121.00 ..........................................................................TCCTGCTGCCCAAGTGCTTAT............................ 21 1 127.00 7.00 1.00 119.00 ..............................CTAAGTACCAGTGCCGCAGGAG....................................................................... 22 1 120.00 13.00 10.00 97.00 ..............................CTAAGTACTAGTGCCGCGGGAG....................................................................... 22 1 116.00 19.00 14.00 83.00 ..............................CTAAGTACTGGTGCCGCAGGAG....................................................................... 22 1 115.00 20.00 13.00 82.00 ..............................CTAAGTACTAGTGCCGCAGTAG....................................................................... 22 1 114.00 7.00 6.00 101.00 ..............................CTAAGTACTAGTGTCGCAGGAG....................................................................... 22 1 113.00 7.00 58.00 48.00 ..............................CAAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 107.00 0.00 1.00 106.00 ..............................CTAAGTACTAGTGCCGTAGGAG....................................................................... 22 1 105.00 9.00 46.00 50.00 ..........................................................................TCCTGCTGCCCAAGTGCTT.............................. 19 1 98.00 5.00 1.00 92.00 ..............................CCAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 97.00 10.00 11.00 76.00 ..............................CTAGGTACTAGTGCCGCAGGAG....................................................................... 22 1 97.00 17.00 19.00 61.00 ..............................CTAAGTACTAGTGCCGCAGGAC....................................................................... 22 1 94.00 17.00 6.00 71.00 ..............................CTAAGTACTAGTxCCGCAGGAG....................................................................... 21 1 93.00 15.00 6.00 72.00 ..............................CTAAGTACTAGTGCAGCAGGAG....................................................................... 22 1 93.00 5.00 10.00 78.00 ..............................CTAAGTATTAGTGCCGCAGGAG....................................................................... 22 1 92.00 8.00 38.00 46.00 ..............................CTAAGTACAAGTGCCGCAGGAG....................................................................... 22 1 91.00 3.00 7.00 81.00 ..............................CTAAGTACTAGTGCCGCA........................................................................... 18 1 91.00 1.00 4.00 86.00 ...........................................................................CCTGCTGCCCAAGTGCTTATT........................... 21 1 89.00 4.00 13.00 72.00 ..............................CTAAGTACTAATGCCGCAGGAG....................................................................... 22 1 89.00 9.00 8.00 72.00 ..............................CTCAGTACTAGTGCCGCAGGAG....................................................................... 22 1 87.00 28.00 9.00 50.00 ..............................CTAAGTACTAGTACCGCAGGAG....................................................................... 22 1 80.00 10.00 7.00 63.00 ...........................................................................CCTGCTGCCCAAGTGCTTATTA.......................... 22 1 77.00 5.00 20.00 52.00 ..............................CTAAGTGCTAGTGCCGCAGGAG....................................................................... 22 1 77.00 11.00 16.00 50.00 ..............................CTAAGTACTAGTGCCGCCGGAG....................................................................... 22 1 75.00 7.00 10.00 58.00 ..............................CTAAGTACTAGGGCCGCAGGAG....................................................................... 22 1 72.00 22.00 7.00 43.00 ..............................TTAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 69.00 8.00 29.00 32.00 ...............................TAAGTACTAGTGCCGCAGGAGTTT.................................................................... 24 1 67.00 4.00 2.00 61.00 ..............................CTAAGTACTAGTGACGCAGGAG....................................................................... 22 1 65.00 4.00 4.00 57.00 ..............................CTAAGTACTAGTGCCGAAGGAG....................................................................... 22 1 65.00 6.00 9.00 50.00 ..............................CTAAGTACTAGTGCCGCAGT......................................................................... 20 1 59.00 5.00 1.00 53.00 ..............................CTGAGTACTAGTGCCGCAGGAG....................................................................... 22 1 58.00 9.00 8.00 41.00 ..............................CTAAGTACTAGTGCCTCAGGA........................................................................ 21 1 56.00 9.00 1.00 46.00 ..........................................................................TCCTGCTGCCCAAGTGCTTA............................. 20 1 56.00 0.00 1.00 55.00 ..............................CTAAGTACTAGTGCCGCAGGAGAA..................................................................... 24 1 54.00 2.00 0.00 52.00 ..............................CTAACTACTAGTGCCGCAGGAG....................................................................... 22 1 54.00 7.00 5.00 42.00 ..............................CTAATTACTAGTGCCGCAGGAG....................................................................... 22 1 53.00 5.00 3.00 45.00 ..............................CTAAGTACTAGTGCCGCAGGAAA...................................................................... 23 1 51.00 3.00 0.00 48.00 ..............................CTAAGTCCTAGTGCCGCAGGAG....................................................................... 22 1 51.00 6.00 6.00 39.00 ..............................CTAAGTACTAGTGCCGCAGGAGTAT.................................................................... 25 1 49.00 6.00 0.00 43.00 ..............................CTAAGTACTAGTGCCGCAGGAGTAA.................................................................... 25 1 48.00 4.00 0.00 44.00 ..............................CTAAGTACTAGTGCCGCCGGA........................................................................ 21 1 48.00 5.00 2.00 41.00 ..............................CTAAATACTAGTGCCGCAGGAG....................................................................... 22 1 48.00 7.00 3.00 38.00 ..............................CTACGTACTAGTGCCGCAGGAG....................................................................... 22 1 48.00 6.00 6.00 36.00 ..............................CTAAGTACTACTGCCGCAGGA........................................................................ 21 1 46.00 2.00 1.00 43.00 ..............................CTAAGTACTAGTTCCGCAGGA........................................................................ 21 1 45.00 5.00 1.00 39.00 ..............................CTAAGTACTAGTGCCGCAAGA........................................................................ 21 1 44.00 26.00 0.00 18.00 ..............................CTAAGTACTAGTGCCGCAGGAGTTA.................................................................... 25 1 42.00 3.00 1.00 38.00 ..............................CTAAGTACTAGAGCCGCAGGAG....................................................................... 22 1 41.00 5.00 5.00 31.00 ..............................CTAAGTACTATTGCCGCAGGA........................................................................ 21 1 41.00 1.00 1.00 39.00 ..............................CTAAGTTCTAGTGCCGCAGGAG....................................................................... 22 1 40.00 4.00 15.00 21.00 ..............................CTAAGAACTAGTGCCGCAGGA........................................................................ 21 1 40.00 1.00 0.00 39.00 ..............................CTAAGTACTAGTGCCGCAGGC........................................................................ 21 1 39.00 2.00 5.00 32.00 ..............................CTAAGTACTCGTGCCGCAGGAG....................................................................... 22 1 38.00 3.00 8.00 27.00 ..............................CTAAGTACTAGTGCCxCAGGA........................................................................ 20 1 38.00 1.00 0.00 37.00 ....................................................TTAGGTTCGTGTCCGCAATACCT................................................ 23 1 37.00 13.00 17.00 7.00 ..............................CTAAGTACTAGTGCCGCAGGAGTTTT................................................................... 26 1 36.00 2.00 0.00 34.00 ..............................CTAAGTACTAGTGCCGCACGA........................................................................ 21 1 35.00 24.00 0.00 11.00 ..............................CTAAGTACTxxTGCCGCAGGA........................................................................ 19 1 35.00 0.00 1.00 34.00 ..............................CTAAGTACTAGTGCCGCTGGAG....................................................................... 22 1 35.00 3.00 15.00 17.00 ..............................CTAAGTACTAGCGCCGCAGGA........................................................................ 21 1 35.00 4.00 1.00 30.00 ..........................................................................TCCTGCTGCCCAAGTGCTTATTA.......................... 23 1 34.00 1.00 7.00 26.00 ..............................CTAAGTAATAGTGCCGCAGGA........................................................................ 21 1 34.00 0.00 0.00 34.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3R:13598006-13598135 -	84.49	GT-------GTGCCGCCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA GTGCTAGATGTACGATGTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .....................................CTAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 45525.00 4393.00 13086.00 2883.00 24234.00 929.00 .....................................CTAAGTACTAGTGCCGCAGGA........................................................................ 21 1 5075.00 328.00 1458.00 359.00 2716.00 214.00 .....................................CTAAGTACTAGTGCCGCAGGAGT...................................................................... 23 1 1539.00 306.00 331.00 138.00 610.00 154.00 .....................................CTAAGTACTAGTGCCGCAGGCG....................................................................... 22 1 1159.00 39.00 148.00 3.00 965.00 4.00 ......................................TAAGTACTAGTGCCGCAGGAG....................................................................... 21 1 770.00 67.00 243.00 49.00 372.00 39.00 .....................................CTAAGTACTAGTGCCGCAGG......................................................................... 20 1 741.00 9.00 216.00 30.00 450.00 36.00 .....................................CTAAGTACTAGTGCCGCCGGAG....................................................................... 22 1 523.00 26.00 102.00 0.00 395.00 0.00 .....................................CTAAGGACTAGTGCCGCAGGAG....................................................................... 22 1 441.00 20.00 89.00 1.00 331.00 0.00 .....................................CTAAGTACTAGTGCCGCAGGAC....................................................................... 22 1 420.00 1.00 9.00 5.00 59.00 346.00 .....................................CTAAGTACTAGTGCCGCAGGAT....................................................................... 22 1 324.00 0.00 26.00 7.00 68.00 223.00 .....................................CTAAGTACTAGTGCCGCAGGTG....................................................................... 22 1 296.00 12.00 42.00 0.00 242.00 0.00 .....................................CTAAGTACTAGTGCCGCAGTAG....................................................................... 22 1 254.00 3.00 35.00 6.00 210.00 0.00 .....................................CTAAGTACTAGCGCCGCAGGAG....................................................................... 22 1 228.00 21.00 35.00 10.00 161.00 1.00 .....................................CTAAGCACTAGTGCCGCAGGAG....................................................................... 22 1 211.00 15.00 44.00 7.00 144.00 1.00 .....................................CTAAGTACTAGTGCCGCAGGGG....................................................................... 22 1 189.00 16.00 36.00 4.00 131.00 2.00 .....................................CTAAGTACTAGGGCCGCAGGAG....................................................................... 22 1 172.00 16.00 21.00 2.00 133.00 0.00 ......................................TAAGTACTAGTGCCGCAGGAGT...................................................................... 22 1 162.00 42.00 30.00 4.00 48.00 38.00 .....................................CTAAGTACTAGTGCCGCATGAG....................................................................... 22 1 151.00 5.00 52.00 4.00 90.00 0.00 .....................................CTAAGTACTAGTGCCGCAGCAG....................................................................... 22 1 130.00 4.00 19.00 2.00 105.00 0.00 .....................................CTAAGTACTAGTGCCGCAGGAGTT..................................................................... 24 1 117.00 37.00 16.00 18.00 39.00 7.00 .....................................CTAAGTACTAGTTCCGCAGGAG....................................................................... 22 1 116.00 2.00 41.00 13.00 54.00 6.00 .....................................CTAAGTACTAGTGCCGCAGGT........................................................................ 21 1 115.00 0.00 36.00 2.00 56.00 21.00 .....................................CTAAGTACTAGTGACGCAGGAG....................................................................... 22 1 113.00 11.00 23.00 1.00 78.00 0.00 .....................................CTAAGGACTAGTGCCGCAGGTG....................................................................... 22 1 106.00 1.00 18.00 0.00 87.00 0.00 .....................................CTAAGTACTAGTGCCGCACGAG....................................................................... 22 1 104.00 2.00 10.00 0.00 90.00 2.00 .....................................CTAAGTACTAGTGCCGCAGGAA....................................................................... 22 1 95.00 4.00 37.00 4.00 45.00 5.00 .....................................CTAAGTACTAGTGCCGCAGGAGA...................................................................... 23 1 88.00 22.00 17.00 8.00 27.00 14.00 .....................................CTACGTACTAGTGCCGCAGGAG....................................................................... 22 1 80.00 4.00 20.00 0.00 56.00 0.00 .....................................ATAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 79.00 8.00 18.00 0.00 53.00 0.00 .....................................CTAAGTACTAGTGCCGCAG.......................................................................... 19 1 78.00 0.00 18.00 2.00 27.00 31.00 .....................................CTAAGTACTAGTGCCGCCGGCG....................................................................... 22 1 77.00 2.00 12.00 0.00 63.00 0.00 .....................................CTAAGTACTCGTGCCGCAGGAG....................................................................... 22 1 76.00 1.00 13.00 0.00 60.00 2.00 .....................................CTAAGTACTAGTGCCGCAGGC........................................................................ 21 1 74.00 0.00 5.00 0.00 63.00 6.00 .....................................CTAAGTACTAGTGCAGCAGGAG....................................................................... 22 1 73.00 7.00 15.00 0.00 50.00 1.00 .....................................CTAAGTACTAGTGCCGCCGGA........................................................................ 21 1 71.00 1.00 20.00 0.00 50.00 0.00 .....................................CTCAGTACTAGTGCCGCAGGAG....................................................................... 22 1 68.00 4.00 5.00 0.00 59.00 0.00 .....................................CTAAGTACTAGTGCCGCGGGAG....................................................................... 22 1 67.00 2.00 11.00 2.00 52.00 0.00 .....................................CTAAGTACTAGTGCCTCAGGAG....................................................................... 22 1 63.00 2.00 9.00 4.00 45.00 3.00 .....................................CTAAGTACTAGTGCCGCAAGAG....................................................................... 22 1 62.00 7.00 35.00 1.00 19.00 0.00 .....................................CTAAGTACTAGTGCCGAAGGAG....................................................................... 22 1 60.00 4.00 7.00 1.00 48.00 0.00 .....................................CTAAGGACTAGTGCCGCAGGA........................................................................ 21 1 56.00 2.00 9.00 1.00 44.00 0.00 ......................................TAAGTACTAGTGCCGCAGGA........................................................................ 20 1 54.00 5.00 18.00 7.00 21.00 3.00 .....................................CTAGGTACTAGTGCCGCAGGAG....................................................................... 22 1 52.00 9.00 9.00 0.00 34.00 0.00 .....................................CTAAGTACTAGTGCCGCAGGG........................................................................ 21 1 50.00 3.00 3.00 0.00 10.00 34.00 .....................................CTAAGTACTAGTGCCACAGGAG....................................................................... 22 1 50.00 3.00 13.00 2.00 30.00 2.00 .....................................CTAAGTACGAGTGCCGCAGGAG....................................................................... 22 1 48.00 0.00 6.00 1.00 40.00 1.00 .....................................CTAAGGACTAGTGCCGCAGGCG....................................................................... 22 1 45.00 3.00 3.00 0.00 39.00 0.00 .................................................................................TCCTGCTGCCCAAGTGCTTATT........................... 22 1 44.00 1.00 10.00 1.00 20.00 12.00 .....................................CTAAGTACTAGCGCCGCAGGA........................................................................ 21 1 44.00 2.00 7.00 3.00 31.00 1.00 .....................................CTAAGTACTAGTGCTGCAGGAG....................................................................... 22 1 44.00 2.00 13.00 5.00 24.00 0.00 .................................................................................TCCTGCTGCCCAAGTGCTT.............................. 19 1 43.00 0.00 19.00 0.00 24.00 0.00 .....................................TTAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 43.00 3.00 16.00 0.00 24.00 0.00 .....................................CGAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 43.00 3.00 6.00 0.00 34.00 0.00 .....................................CTAAGTACTAGAGCCGCAGGAG....................................................................... 22 1 41.00 6.00 8.00 1.00 26.00 0.00 .....................................CTGAGTACTAGTGCCGCAGGAG....................................................................... 22 1 40.00 2.00 10.00 1.00 26.00 1.00 .....................................CTAAGTACTAGTGCCGCTGGAG....................................................................... 22 1 39.00 1.00 7.00 0.00 31.00 0.00 .....................................CTAAGTACCAGTGCCGCAGGAG....................................................................... 22 1 39.00 4.00 9.00 2.00 23.00 1.00 .....................................CTAAGAACTAGTGCCGCAGGAG....................................................................... 22 1 38.00 9.00 0.00 0.00 29.00 0.00 .....................................CCAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 37.00 1.00 12.00 0.00 24.00 0.00 .....................................CTAAGTACTAGTGCCGCAGAAG....................................................................... 22 1 37.00 3.00 12.00 2.00 20.00 0.00 .....................................CTAAGTACTAGTACCGCAGGAG....................................................................... 22 1 36.00 1.00 11.00 0.00 24.00 0.00 .....................................CTAAGTGCTAGTGCCGCAGGAG....................................................................... 22 1 36.00 2.00 10.00 1.00 23.00 0.00 .....................................CTAAGTACTGGTGCCGCAGGAG....................................................................... 22 1 35.00 4.00 19.00 0.00 11.00 1.00 .....................................CTAAGTACTAGTCCCGCAGGAG....................................................................... 22 1 34.00 1.00 1.00 7.00 19.00 6.00 .................................................................................TCCTGCTGCCCAAGTGCTTAT............................ 21 1 34.00 0.00 14.00 0.00 19.00 1.00 .....................................CTAAGTACTAGTGCCGCAGGAGC...................................................................... 23 1 34.00 6.00 8.00 0.00 16.00 4.00 .....................................CTAAGTACTATTGCCGCAGGAG....................................................................... 22 1 34.00 0.00 8.00 3.00 22.00 1.00 .....................................CTAAGTCCTAGTGCCGCAGGAG....................................................................... 22 1 33.00 0.00 6.00 2.00 25.00 0.00 .....................................CTAAGGACTAGTGCCGCAGGGG....................................................................... 22 1 32.00 1.00 2.00 0.00 29.00 0.00 .....................................CTAAGCACTAGGGCCGCAGGAG....................................................................... 22 1 32.00 1.00 5.00 0.00 26.00 0.00 .....................................CTAAGTACTAGTGCCGTAGGAG....................................................................... 22 1 30.00 0.00 7.00 4.00 17.00 2.00 .....................................CTAAGTACTAGGGCCGCAGGA........................................................................ 21 1 27.00 0.00 4.00 0.00 22.00 1.00 .....................................CTAAATACTAGTGCCGCAGGAG....................................................................... 22 1 27.00 3.00 14.00 1.00 9.00 0.00 .....................................CTAAGTAATAGTGCCGCAGGAG....................................................................... 22 1 27.00 4.00 4.00 0.00 19.00 0.00 .....................................CTAAGTACTAGTGCCCCAGGAG....................................................................... 22 1 27.00 1.00 3.00 4.00 19.00 0.00 .....................................CTAAGTACTAGTGCCGCAGGAGG...................................................................... 23 1 27.00 3.00 3.00 0.00 2.00 19.00 .....................................CTAAGTACTAATGCCGCAGGAG....................................................................... 22 1 27.00 1.00 8.00 0.00 18.00 0.00 .....................................CTAAGTACTACTGCCGCAGGAG....................................................................... 22 1 26.00 1.00 7.00 0.00 18.00 0.00 .....................................CTAAGCACTAGTGCCGCAGGA........................................................................ 21 1 26.00 0.00 7.00 0.00 19.00 0.00 .....................................CTAAGTACTAGTGCCGCAGGAGTTT.................................................................... 25 1 24.00 3.00 3.00 8.00 8.00 2.00 .....................................CTAAGTATTAGTGCCGCAGGAG....................................................................... 22 1 23.00 2.00 3.00 1.00 17.00 0.00 .....................................CTAAGTACTAGTGTCGCAGGAG....................................................................... 22 1 23.00 2.00 5.00 0.00 16.00 0.00 .....................................CTAAGTACTAGTGCCGCACGCG....................................................................... 22 1 23.00 1.00 4.00 0.00 18.00 0.00 .....................................CTAAGTACTAGTGCCGCAGT......................................................................... 20 1 22.00 0.00 8.00 0.00 11.00 3.00 .....................................CTAAGGACTAGCGCCGCAGGAG....................................................................... 22 1 22.00 0.00 4.00 0.00 18.00 0.00 .....................................CTAAGGACTAGTGCCGCAGGT........................................................................ 21 1 22.00 0.00 5.00 0.00 17.00 0.00 .....................................CTAAGTACTAGTGCCGCCGGAGT...................................................................... 23 1 22.00 3.00 3.00 0.00 16.00 0.00 ......................................TAAGTACTAGTGCCGCAGGCG....................................................................... 21 1 22.00 1.00 8.00 0.00 13.00 0.00 .....................................CTACGGACTAGTGCCGCAGGAG....................................................................... 22 1 22.00 0.00 5.00 0.00 17.00 0.00 .................................................................................TCCTGCTGCCCAAGTGCTTA............................. 20 1 22.00 0.00 14.00 0.00 7.00 1.00 ......................................TAAGTACTAGTGCCGCAGGAGTT..................................................................... 23 1 22.00 6.00 7.00 3.00 6.00 0.00 .....................................CTAAGGACTAGGGCCGCAGGAG....................................................................... 22 1 21.00 0.00 2.00 0.00 19.00 0.00 .....................................CTAAGCACTAGTGCCGCAGGCG....................................................................... 22 1 21.00 0.00 3.00 0.00 18.00 0.00 .....................................CTAAGTACTAGCGCCGCAGGCG....................................................................... 22 1 21.00 2.00 4.00 0.00 15.00 0.00 .....................................CTAACTACTAGTGCCGCAGGAG....................................................................... 22 1 20.00 1.00 5.00 1.00 13.00 0.00 .....................................CTAAGGACTAGTGACGCAGGAG....................................................................... 22 1 19.00 0.00 3.00 0.00 16.00 0.00 .....................................CTAAGTACTAGTGCCGCCGGGG....................................................................... 22 1 19.00 1.00 4.00 0.00 14.00 0.00 .....................................CTAAGTACTAGTGACGCAGGA........................................................................ 21 1 19.00 1.00 7.00 0.00 11.00 0.00 .....................................CTAAGTACTAGTGCCGCA........................................................................... 18 1 18.00 0.00 6.00 1.00 11.00 0.00 .....................................CTAAGTACTAGTGCCGCAGGACT...................................................................... 23 1 18.00 0.00 0.00 0.00 1.00 17.00 .....................................CTACGTACTAGTGCCGCAGGA........................................................................ 21 1 17.00 0.00 4.00 0.00 13.00 0.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4770:12350666-12350788 +	92.78	GTGTGCCGCCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA GTGCTAGATGTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..............................CTAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 230429.00 2277.00 36391.00 0.00 191761.00 ..............................CTAAGTACTAGTGCCGCAGGA........................................................................ 21 1 29882.00 226.00 2526.00 0.00 27130.00 ..............................CTAAGTACTAGTGCCGCAGGAGT...................................................................... 23 1 17650.00 185.00 828.00 0.00 16637.00 ...............................TAAGTACTAGTGCCGCAGGAG....................................................................... 21 1 4269.00 33.00 622.00 0.00 3614.00 ..............................CTAAGTACTAGTGCCGCATGAG....................................................................... 22 1 2902.00 20.00 114.00 0.00 2768.00 ..............................CTAAGTACTAGTGCCGCAGG......................................................................... 20 1 2435.00 9.00 339.00 0.00 2087.00 ...............................TAAGTACTAGTGCCGCAGGAGT...................................................................... 22 1 2411.00 33.00 117.00 0.00 2261.00 ..............................CTAAGTACTAGTGCCGCAGTAG....................................................................... 22 1 2174.00 19.00 191.00 0.00 1964.00 ..............................ATAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 1899.00 2.00 25.00 0.00 1872.00 ..............................CTAAGTACTAGTGCCGCAGGAGTT..................................................................... 24 1 1859.00 15.00 40.00 0.00 1804.00 ..............................CTAAGTACTAGTGCAGCAGGAG....................................................................... 22 1 1515.00 3.00 36.00 0.00 1476.00 ..............................CTAAGTACTAGTTCCGCAGGAG....................................................................... 22 1 1220.00 10.00 42.00 0.00 1168.00 ..............................CTAAGTACTAGTGCCGCAGGCG....................................................................... 22 1 1156.00 33.00 803.00 0.00 320.00 ..............................CTAAGTACTAGTGCCGCAGGAGA...................................................................... 23 1 1054.00 17.00 36.00 0.00 1001.00 ..............................CTAAGTACTAGTGCCGCAGGAT....................................................................... 22 1 994.00 12.00 80.00 0.00 902.00 ..............................CTAAGTACTAGTGCCTCAGGAG....................................................................... 22 1 914.00 11.00 62.00 0.00 841.00 ..............................CTAAGTACTAGTGCCGAAGGAG....................................................................... 22 1 908.00 2.00 38.00 0.00 868.00 ..............................CTAAGTACTAGTGACGCAGGAG....................................................................... 22 1 890.00 4.00 56.00 0.00 830.00 ..............................CTAAGTACTAGTGCCGCAGGAA....................................................................... 22 1 792.00 1.00 85.00 0.00 706.00 ..............................CTAAGTACTAGTGCCGCAGGAGTTT.................................................................... 25 1 712.00 0.00 6.00 0.00 706.00 ..............................CTAAGTACTATTGCCGCAGGAG....................................................................... 22 1 611.00 7.00 31.00 0.00 573.00 ..............................CTAAGTACTAGCGCCGCAGGAG....................................................................... 22 1 545.00 14.00 102.00 0.00 429.00 ..............................CTAAGTAATAGTGCCGCAGGAG....................................................................... 22 1 509.00 1.00 12.00 0.00 496.00 ..............................CTAAGTACTAGTGCCGCCGGAG....................................................................... 22 1 459.00 20.00 267.00 0.00 172.00 ..............................CTAATTACTAGTGCCGCAGGAG....................................................................... 22 1 428.00 8.00 4.00 0.00 416.00 ..............................CTAAGCACTAGTGCCGCAGGAG....................................................................... 22 1 400.00 5.00 85.00 0.00 310.00 ...............................TAAGTACTAGTGCCGCAGGAGTT..................................................................... 23 1 398.00 10.00 13.00 0.00 375.00 ..............................CTAAGTACTAGTGCCGCAGGGG....................................................................... 22 1 392.00 18.00 160.00 0.00 214.00 ..............................CTAAGTACTAGTGCTGCAGGAG....................................................................... 22 1 377.00 1.00 72.00 0.00 304.00 ..............................CTAAGTACTAGTGCCGCAGGAGC...................................................................... 23 1 356.00 4.00 19.00 0.00 333.00 ..............................CTAAGTACTAGTGCCGCATGA........................................................................ 21 1 345.00 3.00 2.00 0.00 340.00 ..............................CTAAGTACTAGTGCCACAGGAG....................................................................... 22 1 328.00 2.00 38.00 0.00 288.00 ..............................CTAAGTACTAGTGCCGCAGGT........................................................................ 21 1 327.00 1.00 58.00 0.00 268.00 ..............................CTAAGTACTAGTGCCGCAGCAG....................................................................... 22 1 317.00 20.00 109.00 0.00 188.00 ..............................CTAAGTACTAGTGCCCCAGGAG....................................................................... 22 1 314.00 5.00 31.00 0.00 278.00 ..............................CTAAGTACTAGTGCCGCACGAG....................................................................... 22 1 308.00 11.00 72.00 0.00 225.00 ..............................CTAGGTACTAGTGCCGCAGGAG....................................................................... 22 1 293.00 0.00 31.00 0.00 262.00 ...............................TAAGTACTAGTGCCGCAGGA........................................................................ 20 1 291.00 2.00 26.00 0.00 263.00 ..............................CTAAGTACTAGGGCCGCAGGAG....................................................................... 22 1 288.00 10.00 72.00 0.00 206.00 ..............................CTAAGGACTAGTGCCGCAGGAG....................................................................... 22 1 287.00 12.00 183.00 0.00 92.00 ..........................................................................TCCTGCTGCCCAAGTGCTTATT........................... 22 1 278.00 8.00 34.00 0.00 236.00 ..............................CTCAGTACTAGTGCCGCAGGAG....................................................................... 22 1 266.00 0.00 19.00 0.00 247.00 ..............................CTAAGTACTAGTGCCGCAAGAG....................................................................... 22 1 263.00 8.00 134.00 0.00 121.00 ..............................TTAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 261.00 2.00 94.00 0.00 165.00 ..............................CTGAGTACTAGTGCCGCAGGAG....................................................................... 22 1 261.00 5.00 34.00 0.00 222.00 ..............................CTAAGTACTxxTGCCGCAGGAG....................................................................... 20 1 238.00 0.00 0.00 0.00 238.00 ..............................CTAAGTACCAGTGCCGCAGGAG....................................................................... 22 1 233.00 1.00 23.00 0.00 209.00 ..............................CTAAGTACTACTGCCGCAGGAG....................................................................... 22 1 233.00 2.00 14.00 0.00 217.00 ..............................CTAAGTACTAGTCCCGCAGGAG....................................................................... 22 1 225.00 3.00 14.00 0.00 208.00 ..............................CTAAGTACTAGTGCAGCAGGA........................................................................ 21 1 218.00 0.00 4.00 0.00 214.00 ..............................CTAAGTACTAGTGCCGCATGAGT...................................................................... 23 1 213.00 3.00 3.00 0.00 207.00 ..............................CTAAGTACTAGTGCCGCAGGAC....................................................................... 22 1 211.00 3.00 36.00 0.00 172.00 ..............................CTAAGTACTAGTGCCGCGGGAG....................................................................... 22 1 211.00 1.00 46.00 0.00 164.00 ..............................ATAAGTACTAGTGCCGCAGGA........................................................................ 21 1 211.00 0.00 2.00 0.00 209.00 ...........................................................................CCTGCTGCCCAAGTGCTTATTA.......................... 22 1 210.00 7.00 14.00 0.00 189.00 ..............................CTAAGTACTAGTGCCGTAGGAG....................................................................... 22 1 207.00 1.00 21.00 0.00 185.00 ..............................CTAAGTACTAGTGCCGCAGTA........................................................................ 21 1 204.00 0.00 7.00 0.00 197.00 ..............................CTAAGTACTAGTTCCGCAGGA........................................................................ 21 1 199.00 2.00 2.00 0.00 195.00 ..............................CTAAGTACTAGTGCCGCA........................................................................... 18 1 199.00 0.00 2.00 0.00 197.00 ..............................CTAAGTACTAGTACCGCAGGAG....................................................................... 22 1 192.00 3.00 18.00 0.00 171.00 ..............................CTAAGTACTAGTGCCGCAGGTG....................................................................... 22 1 188.00 7.00 160.00 0.00 21.00 ..............................CCAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 183.00 3.00 23.00 0.00 157.00 ..............................CTAAGTACTAGTGCCGCAGTAGT...................................................................... 23 1 174.00 1.00 4.00 0.00 169.00 ..............................CTAAGTACTGGTGCCGCAGGAG....................................................................... 22 1 172.00 2.00 38.00 0.00 132.00 ..............................CTAAGTACTAGTGTCGCAGGAG....................................................................... 22 1 162.00 1.00 16.00 0.00 145.00 ..............................CTAAGTACTAGAGCCGCAGGAG....................................................................... 22 1 161.00 1.00 35.00 0.00 125.00 ..............................CTAAGTGCTAGTGCCGCAGGAG....................................................................... 22 1 159.00 2.00 20.00 0.00 137.00 ..............................CTACGTACTAGTGCCGCAGGAG....................................................................... 22 1 155.00 1.00 39.00 0.00 115.00 ..............................ATAAGTACTAGTGCCGCAGGAGT...................................................................... 23 1 152.00 0.00 1.00 0.00 151.00 ..............................CTAAGTACTAGTGCCGCAGGAGTAT.................................................................... 25 1 145.00 0.00 2.00 0.00 143.00 ..............................CTAAGTACTAGTGCCGCAGGAGG...................................................................... 23 1 141.00 1.00 1.00 0.00 139.00 ..............................CTAAGTACTAGTGCCGCAGAAG....................................................................... 22 1 141.00 6.00 49.00 0.00 86.00 ..............................CTAAGTACTAGTGCCxCAGGAG....................................................................... 21 1 137.00 0.00 7.00 0.00 130.00 ..............................CTAAGTACTAGTGCCTCAGGA........................................................................ 21 1 135.00 1.00 1.00 0.00 133.00 ..........................................................................TCCTGCTGCCCAAGTGCTTAT............................ 21 1 127.00 0.00 12.00 0.00 115.00 ..............................CTAAGTACTAATGCCGCAGGAG....................................................................... 22 1 124.00 1.00 14.00 0.00 109.00 ..............................CTAAGTACTAGTGCCGCAG.......................................................................... 19 1 117.00 2.00 18.00 0.00 97.00 ..............................CTAAGTACTATTGCCGCAGGA........................................................................ 21 1 115.00 1.00 2.00 0.00 112.00 ..............................CTAAGTATTAGTGCCGCAGGAG....................................................................... 22 1 113.00 2.00 12.00 0.00 99.00 ..............................CTAAGTACTAGTGACGCAGGA........................................................................ 21 1 113.00 0.00 5.00 0.00 108.00 ...............................TAAGTACTAGTGCCGCAGGAGTTT.................................................................... 24 1 110.00 1.00 0.00 0.00 109.00 ..............................CTAAGTACTAGTGCAGCAGGAGT...................................................................... 23 1 109.00 1.00 0.00 0.00 108.00 ..............................CTAAGTACTAGTGCCGAAGGA........................................................................ 21 1 109.00 0.00 2.00 0.00 107.00 ..............................CTAAGTACTAGTxCCGCAGGAG....................................................................... 21 1 108.00 0.00 1.00 0.00 107.00 ..............................CTAAGTACTCGTGCCGCAGGAG....................................................................... 22 1 104.00 0.00 34.00 0.00 70.00 ..............................CTAAGTACTAGTTCCGCAGGAGT...................................................................... 23 1 104.00 1.00 0.00 0.00 103.00 ..............................CTAAGTACTAGCGCCGCAGGA........................................................................ 21 1 102.00 3.00 18.00 0.00 81.00 ..............................CTAAGTACTAGTGCCGCCGGA........................................................................ 21 1 101.00 5.00 27.00 0.00 69.00 ..............................CTAACTACTAGTGCCGCAGGAG....................................................................... 22 1 96.00 1.00 7.00 0.00 88.00 ..............................CTAAGTCCTAGTGCCGCAGGAG....................................................................... 22 1 93.00 0.00 16.00 0.00 77.00 ..............................CTAAGAACTAGTGCCGCAGGAG....................................................................... 22 1 88.00 1.00 29.00 0.00 58.00 ..............................CTTAGTACTAGTGCCGCAGGAG....................................................................... 22 1 87.00 0.00 5.00 0.00 82.00 ..............................CTAAGTACTAGTGACGCAGGAGT...................................................................... 23 1 85.00 0.00 0.00 0.00 85.00 ...........................................................................CCTGCTGCCCAAGTGCTTATT........................... 21 1 85.00 1.00 8.00 0.00 76.00 ..............................CTAAGTACTAGTGCCGAAGGAGT...................................................................... 23 1 83.00 0.00 3.00 0.00 80.00 ..............................CTAAGTACTAGTGCCTCAGGAGT...................................................................... 23 1 81.00 3.00 0.00 0.00 78.00 ..............................CTAAGGACTAGTGCCGCAGGTG....................................................................... 22 1 81.00 5.00 76.00 0.00 0.00 ..............................CTAAGTACTAGTGCCGCAGAG........................................................................ 21 1 76.00 0.00 2.00 0.00 74.00 ..............................CTAAGTACTAGTGCCGCAGGAGTAA.................................................................... 25 1 71.00 0.00 0.00 0.00 71.00 ..............................CTAAGTACTAGTGCCGCAGGC........................................................................ 21 1 70.00 1.00 34.00 0.00 35.00 ..............................CTAAGTACTAGTGCCGCTGGAG....................................................................... 22 1 69.00 1.00 21.00 0.00 47.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000453906:210236-210357 +	88.07	GTGTGCCGCCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAA--AAGAA GAGTG---ATTACTTACCGAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCCTATCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGAGTTGTCCATCAATGAAGAA Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000409802:705185-705307 +	89.58	GTGTGCCGCCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA ATATCGTGTCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTGCAACAAAGAAA Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302402:2002521-2002644 -	84.2	GTGTGCCGCCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-AGTTGCCCAGCAAAAGAA TCCCAGTGCCCACTTACCGAGCTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAAGTTGTCCACCGCAAGTG Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415380:69928-70047 -	88.69	GTGTGCCGCCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA GAGTGC---CTACTTACCGAGCTCACTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCATCAGTATGA Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000491047:1912675-1912796 +	90.31	GTGTGCCGCCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA GTGTATCAGTTACTTACCAAGTGCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAACAT-TGAA Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000778831:19479-19601 -	87.18	GTGTGCCGCCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA TGGCAGCTATTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAACAGTGAAA Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302392:529160-529299 +	64.82	GTGTGCCGCCTACT------------------------TACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA GCTTTC-------TTCCGAAAGGAAAATCCCAAGCCGATGCCGAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGATGCCCAACCTGCTAG Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13340:1848657-1848824 -	49.73	GTGTGCCGCCTACTTA-----------------------------------------------CCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAA------GAA GAGT-------ACTTAGCCCCAACCATTGGTAAATATTGATTTTATACTTACATTACTTCCTGCGAAG-TCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAGCAAAATACAAGGAA Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo .............................................................................CTAAGTACTAGTGCCGCAGGAG............................................................................. 22 1 67676.00 5039.00 41630.00 20739.00 268.00 .............................................................................CTAAGTACTAGTGCCGCAGGA.............................................................................. 21 1 12353.00 560.00 9501.00 2252.00 40.00 .............................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................ 23 1 11930.00 194.00 11134.00 564.00 38.00 .............................................................................CTAAGTACTAGTGCCGCAGGAGTT........................................................................... 24 1 2381.00 43.00 2289.00 42.00 7.00 ..............................................................................TAAGTACTAGTGCCGCAGGAG............................................................................. 21 1 1904.00 82.00 1319.00 495.00 8.00 ..............................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................ 22 1 1880.00 20.00 1773.00 81.00 6.00 .............................................................................CTAAGTACTAGTGCCGCAGGAGTTT.......................................................................... 25 1 1464.00 23.00 1424.00 17.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGG............................................................................... 20 1 1179.00 107.00 614.00 456.00 2.00 .............................................................................CTAAGTACTAGTGCCGCAGGAT............................................................................. 22 1 730.00 38.00 629.00 63.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGGCG............................................................................. 22 1 597.00 60.00 162.00 374.00 1.00 .............................................................................CTAAGTACTAGTTCCGCAGGAG............................................................................. 22 1 512.00 39.00 451.00 21.00 1.00 .............................................................................CTAAGTACTAGTGCCGAAGGAG............................................................................. 22 1 439.00 23.00 380.00 36.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................ 23 1 429.00 3.00 413.00 9.00 4.00 .............................................................................CTAAGGACTAGTGCCGCAGGAG............................................................................. 22 1 413.00 0.00 22.00 387.00 4.00 .............................................................................CTAAGTACTAGTGCCGCAGTAG............................................................................. 22 1 408.00 16.00 301.00 88.00 3.00 ..............................................................................TAAGTACTAGTGCCGCAGGAGTT........................................................................... 23 1 372.00 1.00 362.00 8.00 1.00 ..............................................................................TAAGTACTAGTGCCGCAGGA.............................................................................. 20 1 357.00 10.00 266.00 81.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGGTG............................................................................. 22 1 322.00 34.00 97.00 191.00 0.00 .............................................................................CTAAGTACTAGCGCCGCAGGAG............................................................................. 22 1 304.00 28.00 75.00 200.00 1.00 .............................................................................CTAAGTACTAGTGCCGCAGGAA............................................................................. 22 1 301.00 4.00 260.00 37.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................ 23 1 300.00 20.00 249.00 31.00 0.00 .............................................................................ATAAGTACTAGTGCCGCAGGAG............................................................................. 22 1 296.00 7.00 153.00 136.00 0.00 .............................................................................CTAAGTACTAGTGCCGCATGAG............................................................................. 22 1 295.00 14.00 221.00 55.00 5.00 .............................................................................CTAAGCACTAGTGCCGCAGGAG............................................................................. 22 1 279.00 3.00 48.00 224.00 4.00 .............................................................................CTAAGTACTAGTGACGCAGGAG............................................................................. 22 1 261.00 22.00 175.00 64.00 0.00 ..............................................................................TAAGTACTAGTGCCGCAGGAGTTT.......................................................................... 24 1 259.00 6.00 247.00 3.00 3.00 .............................................................................CTAAGTACTAGTGCCTCAGGAG............................................................................. 22 1 256.00 23.00 189.00 42.00 2.00 .............................................................................CTAAGTACTAGTGCCGCAGGGG............................................................................. 22 1 217.00 14.00 65.00 137.00 1.00 .............................................................................CTAAGTACTAGTGCCGCAGCAG............................................................................. 22 1 168.00 5.00 21.00 141.00 1.00 .............................................................................CTAAGTACTAGGGCCGCAGGAG............................................................................. 22 1 167.00 11.00 11.00 142.00 3.00 .........................................................................................................................TCCTGCTGCCCAAGTGCTTATT................................. 22 1 166.00 1.00 133.00 30.00 2.00 .............................................................................CTAAGTACTAGTGCAGCAGGAG............................................................................. 22 1 166.00 5.00 108.00 53.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGGT.............................................................................. 21 1 165.00 7.00 93.00 65.00 0.00 .............................................................................CTGAGTACTAGTGCCGCAGGAG............................................................................. 22 1 164.00 1.00 142.00 21.00 0.00 .............................................................................TTAAGTACTAGTGCCGCAGGAG............................................................................. 22 1 152.00 2.00 19.00 131.00 0.00 .............................................................................CTAAGTACTAGTTCCGCAGGAGT............................................................................ 23 1 144.00 1.00 140.00 2.00 1.00 .............................................................................CTAAGTACTAGTGCCGCACGAG............................................................................. 22 1 144.00 3.00 26.00 111.00 4.00 .............................................................................CTAAGTACTAGTGCTGCAGGAG............................................................................. 22 1 139.00 8.00 102.00 29.00 0.00 .............................................................................CTAAGTACTAGTGCCGCA................................................................................. 18 1 137.00 1.00 98.00 37.00 1.00 ..........................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................ 22 1 137.00 1.00 126.00 8.00 2.00 .............................................................................CTAAGTACTAGTGCCGCAGGAGTTTT......................................................................... 26 1 125.00 4.00 120.00 1.00 0.00 .............................................................................CTAAGTACTAGTTCCGCAGGA.............................................................................. 21 1 123.00 4.00 116.00 3.00 0.00 ...............................................................................AAGTACTAGTGCCGCAGGAGTTT.......................................................................... 23 1 114.00 2.00 110.00 2.00 0.00 .........................................................................................................................TCCTGCTGCCCAAGTGCTTAT.................................. 21 1 112.00 0.00 94.00 18.00 0.00 .............................................................................CTAAGTACTAGTGCCACAGGAG............................................................................. 22 1 111.00 18.00 52.00 41.00 0.00 .............................................................................CTAAGAACTAGTGCCGCAGGAG............................................................................. 22 1 110.00 4.00 11.00 95.00 0.00 ...............................................................................AAGTACTAGTGCCGCAGGAGT............................................................................ 21 1 108.00 1.00 101.00 6.00 0.00 .............................................................................CTAAGTACTAGAGCCGCAGGAG............................................................................. 22 1 102.00 26.00 25.00 50.00 1.00 .............................................................................CTAAGTACTAGTGCCGAAGGA.............................................................................. 21 1 91.00 1.00 83.00 7.00 0.00 .........................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................ 23 1 89.00 0.00 81.00 8.00 0.00 ...............................................................................AAGTACTAGTGCCGCAGGAGTT........................................................................... 22 1 89.00 2.00 82.00 4.00 1.00 .............................................................................CTAAGTACTAGTGCCGCAGGAC............................................................................. 22 1 88.00 4.00 20.00 63.00 1.00 .............................................................................CTAAGTACTAGTGCCGAAGGAGT............................................................................ 23 1 84.00 0.00 83.00 1.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGTAGT............................................................................ 23 1 82.00 0.00 81.00 1.00 0.00 .............................................................................CTAAGTACTAGTGCCGCCGGAG............................................................................. 22 1 81.00 2.00 6.00 71.00 2.00 .............................................................................CTAAGTACTATTGCCGCAGGAG............................................................................. 22 1 79.00 13.00 53.00 11.00 2.00 .............................................................................CTAAGTACTAGTGCCGCAGGC.............................................................................. 21 1 75.00 2.00 41.00 32.00 0.00 .............................................................................CTAAGTACCAGTGCCGCAGGAG............................................................................. 22 1 73.00 5.00 43.00 25.00 0.00 .............................................................................CTAAGTACTAGTACCGCAGGAG............................................................................. 22 1 73.00 25.00 30.00 18.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAG................................................................................ 19 1 73.00 9.00 25.00 36.00 3.00 .............................................................................CTAAGTACTAGTGCCGCGGGAG............................................................................. 22 1 70.00 3.00 39.00 28.00 0.00 .............................................................................CTAAGTACTAGTGTCGCAGGAG............................................................................. 22 1 69.00 5.00 50.00 14.00 0.00 .............................................................................CTAAGTACTACTGCCGCAGGAG............................................................................. 22 1 68.00 8.00 34.00 26.00 0.00 .............................................................................CTAGGTACTAGTGCCGCAGGAG............................................................................. 22 1 68.00 7.00 43.00 18.00 0.00 .............................................................................CCAAGTACTAGTGCCGCAGGAG............................................................................. 22 1 67.00 6.00 43.00 18.00 0.00 .............................................................................CTAAGTACTAGTGCCCCAGGAG............................................................................. 22 1 67.00 10.00 19.00 38.00 0.00 .............................................................................CTAAGGACTAGTGCCGCAGGTG............................................................................. 22 1 66.00 0.00 0.00 66.00 0.00 .............................................................................CTAAGTACTAGTCCCGCAGGAG............................................................................. 22 1 66.00 19.00 36.00 11.00 0.00 .............................................................................CTAAGTACTAGTGCCGTAGGAG............................................................................. 22 1 65.00 4.00 49.00 11.00 1.00 .............................................................................CTAAGTACTAGTGCCTCAGGAGT............................................................................ 23 1 64.00 2.00 61.00 1.00 0.00 .............................................................................CTAAGTAATAGTGCCGCAGGAG............................................................................. 22 1 63.00 1.00 26.00 35.00 1.00 .............................................................................CTAAGTACTAGTTCCGCAGGAT............................................................................. 22 1 63.00 5.00 57.00 1.00 0.00 .............................................................................CTAAGTACTAGTGCCTCAGGA.............................................................................. 21 1 60.00 4.00 53.00 2.00 1.00 .............................................................................CTAAGTACTAGTGCCGCATGAGT............................................................................ 23 1 60.00 0.00 58.00 2.00 0.00 .............................................................................CTAAGGACTAGTGCCGCAGGA.............................................................................. 21 1 58.00 0.00 7.00 50.00 1.00 .............................................................................CTAAGTACTAGTGCCGCATGA.............................................................................. 21 1 57.00 1.00 52.00 3.00 1.00 .............................................................................CTAAGTACTGGTGCCGCAGGAG............................................................................. 22 1 56.00 1.00 37.00 18.00 0.00 .............................................................................CTAAGTACTAGCGCCGCAGGA.............................................................................. 21 1 55.00 4.00 15.00 36.00 0.00 .............................................................................ATAAGTACTAGTGCCGCAGGA.............................................................................. 21 1 53.00 1.00 30.00 22.00 0.00 .............................................................................CTACGTACTAGTGCCGCAGGAG............................................................................. 22 1 52.00 6.00 11.00 34.00 1.00 .............................................................................CTAAGTGCTAGTGCCGCAGGAG............................................................................. 22 1 51.00 2.00 35.00 14.00 0.00 .............................................................................CTAAGTACTxxTGCCGCAGGAG............................................................................. 20 1 48.00 8.00 40.00 0.00 0.00 ..........................................................................................................................CCTGCTGCCCAAGTGCTTATT................................. 21 1 48.00 0.00 44.00 4.00 0.00 .............................................................................CGAAGTACTAGTGCCGCAGGAG............................................................................. 22 1 48.00 10.00 4.00 34.00 0.00 .............................................................................CTAAGTACTAGTGACGCAGGAGT............................................................................ 23 1 46.00 1.00 44.00 1.00 0.00 .............................................................................CTAAGTACTAGTGACGCAGGA.............................................................................. 21 1 46.00 1.00 39.00 6.00 0.00 .............................................................................CTAAGTACTAGTxCCGCAGGAG............................................................................. 21 1 45.00 8.00 37.00 0.00 0.00 ...............................................................................AAGTACTAGTGCCGCAGGAG............................................................................. 20 1 45.00 3.00 28.00 14.00 0.00 .............................................................................CTAAGTACTAGTGCCxCAGGAG............................................................................. 21 1 45.00 3.00 42.00 0.00 0.00 .............................................................................GTAAGTACTAGTGCCGCAGGAG............................................................................. 22 1 43.00 2.00 8.00 33.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGGAGTTA.......................................................................... 25 1 43.00 0.00 43.00 0.00 0.00 .............................................................................CTAATTACTAGTGCCGCAGGAG............................................................................. 22 1 43.00 3.00 36.00 4.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGGG.............................................................................. 21 1 43.00 3.00 24.00 16.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGGCGT............................................................................ 23 1 42.00 1.00 34.00 7.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGTA.............................................................................. 21 1 40.00 0.00 31.00 9.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGGATT............................................................................ 23 1 40.00 0.00 36.00 4.00 0.00 .............................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................ 23 1 39.00 0.00 34.00 4.00 1.00 .............................................................................CTGAGTACTAGTGCCGCAGGAGT............................................................................ 23 1 37.00 0.00 36.00 1.00 0.00 .............................................................................CTAAGTACGAGTGCCGCAGGAG............................................................................. 22 1 37.00 3.00 1.00 31.00 2.00 .............................................................................CTAAGTACTAGTGCCGCAGGAGTTG.......................................................................... 25 1 36.00 2.00 34.00 0.00 0.00 .............................................................................CTAAGTATTAGTGCCGCAGGAG............................................................................. 22 1 35.00 0.00 17.00 18.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396712:2482763-2482924 +	51.64	GTGTGCCGCCTACTTACC----------------------------------------------AAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGA-A GAGT-------ACTTACCCCAAACCAATGGTAAATATTGATTTTGTACTTACTTACTTCCTGCGAAG-TCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAGCGAAATACA Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2:16736618-16736739 -	81.3	GTGTGCCGCCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAA -TATCTTGTGCATTTTGGCGGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAACAGTGAAA Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ..............................CTAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 62405.00 5481.00 6780.00 50138.00 6.00 ..............................CTAAGTACTAGTGCCGCAGGA........................................................................ 21 1 8811.00 1084.00 789.00 6935.00 3.00 ..............................CTAAGTACTAGTGCCGCAGGAGT...................................................................... 23 1 1819.00 271.00 437.00 1111.00 0.00 ..............................CTAAGTACTAGTGCCGCAGG......................................................................... 20 1 1527.00 143.00 34.00 1349.00 1.00 ...............................TAAGTACTAGTGCCGCAGGAG....................................................................... 21 1 1318.00 149.00 95.00 1070.00 4.00 ..............................CTAAGTACTAGTGCCGCAGGCG....................................................................... 22 1 554.00 5.00 102.00 447.00 0.00 ..............................CTAAGGACTAGTGCCGCAGGAG....................................................................... 22 1 426.00 0.00 76.00 350.00 0.00 ..............................CTAAGTACTAGCGCCGCAGGAG....................................................................... 22 1 314.00 9.00 27.00 278.00 0.00 ...............................TAAGTACTAGTGCCGCAGGAGT...................................................................... 22 1 291.00 44.00 74.00 173.00 0.00 ..............................CTAAGCACTAGTGCCGCAGGAG....................................................................... 22 1 254.00 2.00 20.00 232.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGT........................................................................ 21 1 236.00 24.00 1.00 211.00 0.00 ..............................TTAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 205.00 3.00 10.00 192.00 0.00 ..............................ATAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 205.00 3.00 26.00 176.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGGG....................................................................... 22 1 198.00 5.00 46.00 147.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGTG....................................................................... 22 1 191.00 0.00 39.00 152.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGAGTT..................................................................... 24 1 180.00 33.00 81.00 66.00 0.00 ..............................CTAAGTACTAGGGCCGCAGGAG....................................................................... 22 1 178.00 1.00 25.00 152.00 0.00 ..............................CTAAGTACTAGTGCCGCCGGAG....................................................................... 22 1 166.00 2.00 38.00 126.00 0.00 ..............................CTAAGTACTAGTGCCGCAGCAG....................................................................... 22 1 154.00 2.00 10.00 142.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGAA....................................................................... 22 1 151.00 10.00 15.00 126.00 0.00 ..............................CTCAGTACTAGTGCCGCAGGAG....................................................................... 22 1 136.00 1.00 8.00 127.00 0.00 ..............................CTAAGTACTAGTGCCGCAGTAG....................................................................... 22 1 122.00 2.00 8.00 112.00 0.00 ..............................CTAAGTACTAGTGCCGCACGAG....................................................................... 22 1 117.00 4.00 10.00 103.00 0.00 ..............................CTGAGTACTAGTGCCGCAGGAG....................................................................... 22 1 116.00 3.00 3.00 110.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGAC....................................................................... 22 1 112.00 1.00 5.00 95.00 11.00 ..............................CTAAGTACTAGTGACGCAGGAG....................................................................... 22 1 109.00 2.00 26.00 81.00 0.00 ...............................TAAGTACTAGTGCCGCAGGA........................................................................ 20 1 105.00 19.00 7.00 79.00 0.00 ..............................CTAAGTACTAGTGCCGAAGGAG....................................................................... 22 1 97.00 3.00 14.00 80.00 0.00 ..............................CTAAGTACTAGTGCCGCAAGAG....................................................................... 22 1 92.00 2.00 13.00 77.00 0.00 ..............................CTAAGTACTAGAGCCGCAGGAG....................................................................... 22 1 91.00 4.00 10.00 77.00 0.00 ..............................CTAAGTACTAGTGCAGCAGGAG....................................................................... 22 1 85.00 0.00 18.00 67.00 0.00 ..............................CTAAGTACTAGTGCCGCGGGAG....................................................................... 22 1 76.00 7.00 12.00 57.00 0.00 ..............................CTAAGTACTAGTGCCACAGGAG....................................................................... 22 1 76.00 2.00 12.00 62.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGAGA...................................................................... 23 1 75.00 8.00 27.00 40.00 0.00 ..............................CTAAGTACTAGTGCTGCAGGAG....................................................................... 22 1 75.00 7.00 8.00 60.00 0.00 ..............................CTAAGTACTAGTGCCGCAGAAG....................................................................... 22 1 74.00 4.00 3.00 67.00 0.00 ..............................CTAAGGACTAGTGCCGCAGGTG....................................................................... 22 1 73.00 0.00 3.00 70.00 0.00 ..............................CTAAGGACTAGTGCCGCAGGA........................................................................ 21 1 63.00 0.00 11.00 52.00 0.00 ..............................CTAAGAACTAGTGCCGCAGGAG....................................................................... 22 1 63.00 0.00 7.00 56.00 0.00 ..............................CTAAGTACTAGTGCCCCAGGAG....................................................................... 22 1 62.00 8.00 2.00 52.00 0.00 ..............................CTAAGTACTAGCGCCGCAGGA........................................................................ 21 1 62.00 7.00 3.00 52.00 0.00 ..............................CTAAGTACTAGTGCCGCATGAG....................................................................... 22 1 61.00 2.00 11.00 48.00 0.00 ..............................CTAAGTACCAGTGCCGCAGGAG....................................................................... 22 1 59.00 4.00 5.00 50.00 0.00 ..............................CTAAGTACTAGTGCCGCTGGAG....................................................................... 22 1 58.00 2.00 5.00 51.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGAT....................................................................... 22 1 57.00 5.00 7.00 44.00 1.00 ..............................CTAGGTACTAGTGCCGCAGGAG....................................................................... 22 1 56.00 4.00 10.00 42.00 0.00 ..............................CTAAGGACTAGCGCCGCAGGAG....................................................................... 22 1 54.00 0.00 1.00 53.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGC........................................................................ 21 1 54.00 1.00 4.00 49.00 0.00 ..............................CTACGTACTAGTGCCGCAGGAG....................................................................... 22 1 52.00 1.00 4.00 47.00 0.00 ..............................CTAAGTACTGGTGCCGCAGGAG....................................................................... 22 1 52.00 4.00 9.00 39.00 0.00 ..............................CTAAGTACTAGTGCCTCAGGAG....................................................................... 22 1 50.00 7.00 2.00 40.00 1.00 ..............................CTAAGTGCTAGTGCCGCAGGAG....................................................................... 22 1 49.00 3.00 9.00 37.00 0.00 ..............................CTAAGTAATAGTGCCGCAGGAG....................................................................... 22 1 48.00 2.00 7.00 39.00 0.00 ..............................CGAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 48.00 0.00 7.00 41.00 0.00 ..............................CTAAGTACTACTGCCGCAGGAG....................................................................... 22 1 48.00 8.00 3.00 37.00 0.00 ..............................CTAAGTACTAGTCCCGCAGGAG....................................................................... 22 1 44.00 8.00 2.00 34.00 0.00 ..............................CTAAGTACTAGTACCGCAGGAG....................................................................... 22 1 42.00 3.00 2.00 37.00 0.00 ..............................CCAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 42.00 2.00 3.00 37.00 0.00 ..............................CTAAGTACTAGTGTCGCAGGAG....................................................................... 22 1 41.00 1.00 11.00 29.00 0.00 ..............................CTAAGTACTAGTTCCGCAGGAG....................................................................... 22 1 39.00 6.00 5.00 28.00 0.00 ..............................CTAAGTACTAGTGCCGTAGGAG....................................................................... 22 1 38.00 5.00 6.00 27.00 0.00 ..............................ATAAGTACTAGTGCCGCAGGA........................................................................ 21 1 38.00 0.00 4.00 34.00 0.00 ..............................CTAAGTACTAGTGCCGCAG.......................................................................... 19 1 37.00 2.00 0.00 35.00 0.00 ..............................CTAAGCACTAGTGCCGCAGGA........................................................................ 21 1 37.00 1.00 4.00 32.00 0.00 ..........................................................................TCCTGCTGCCCAAGTGCTTATT........................... 22 1 36.00 4.00 6.00 26.00 0.00 ...............................TAAGTACTAGTGCCGCAGGAGTT..................................................................... 23 1 35.00 2.00 19.00 14.00 0.00 ..............................CTAAGTACTAGTGCCGCCGGA........................................................................ 21 1 33.00 0.00 7.00 26.00 0.00 ..............................CTTAGTACTAGTGCCGCAGGAG....................................................................... 22 1 32.00 0.00 8.00 24.00 0.00 ..............................GTAAGTACTAGTGCCGCAGGAG....................................................................... 22 1 31.00 1.00 4.00 26.00 0.00 ..............................CTAAGTACTAATGCCGCAGGAG....................................................................... 22 1 31.00 3.00 7.00 21.00 0.00 ..............................CTAAGGACTAGTGCCGCAGGCG....................................................................... 22 1 31.00 0.00 4.00 27.00 0.00 ..............................CTAAGTACTAGTGCCGCAGT......................................................................... 20 1 29.00 3.00 0.00 26.00 0.00 ..............................CTAAGTACTCGTGCCGCAGGAG....................................................................... 22 1 28.00 1.00 10.00 17.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGAGTTT.................................................................... 25 1 28.00 12.00 6.00 10.00 0.00 ..............................CTAAGTACGAGTGCCGCAGGAG....................................................................... 22 1 26.00 0.00 4.00 22.00 0.00 ..............................CTAAGCACTAGGGCCGCAGGAG....................................................................... 22 1 25.00 0.00 0.00 25.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGG........................................................................ 21 1 25.00 1.00 8.00 16.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGAGC...................................................................... 23 1 25.00 3.00 7.00 15.00 0.00 ..............................CTAACTACTAGTGCCGCAGGAG....................................................................... 22 1 25.00 3.00 1.00 21.00 0.00 ..............................CTAAGTACTATTGCCGCAGGAG....................................................................... 22 1 23.00 8.00 2.00 13.00 0.00 ..............................CTAAGTACTAGGGCCGCAGGA........................................................................ 21 1 23.00 0.00 2.00 21.00 0.00 ..............................CTAAGCACTAGCGCCGCAGGAG....................................................................... 22 1 23.00 0.00 2.00 21.00 0.00 ..............................CTAAATACTAGTGCCGCAGGAG....................................................................... 22 1 22.00 1.00 7.00 14.00 0.00 ..............................TTAAGTACTAGTGCCGCAGGA........................................................................ 21 1 22.00 0.00 1.00 21.00 0.00 ..............................CTAAGTATTAGTGCCGCAGGAG....................................................................... 22 1 21.00 2.00 5.00 14.00 0.00 ..............................CTAAGTACTAGTGCCGCCGGCG....................................................................... 22 1 21.00 0.00 6.00 15.00 0.00 ..............................CTCAGTACTAGTGCCGCAGGA........................................................................ 21 1 20.00 1.00 1.00 18.00 0.00 ..............................CTAAGTACTAGTGCCGCACGCG....................................................................... 22 1 20.00 0.00 2.00 18.00 0.00 ..............................CTAAGGACTAGGGCCGCAGGAG....................................................................... 22 1 19.00 0.00 3.00 16.00 0.00 ..............................CTAAGTACTAGTGCCGCA........................................................................... 18 1 19.00 1.00 0.00 18.00 0.00 ..............................CTAAGCACTAGTGCCGCAGGCG....................................................................... 22 1 19.00 0.00 2.00 17.00 0.00 ................................AAGTACTAGTGCCGCAGGAG....................................................................... 20 1 19.00 4.00 1.00 14.00 0.00 ..............................CTAAGTACAAGTGCCGCAGGAG....................................................................... 22 1 19.00 1.00 0.00 18.00 0.00 ..............................CTAAGGACTAGTGCCGCAGCAG....................................................................... 22 1 18.00 0.00 0.00 18.00 0.00 ...............................TAAGTACTAGTGCCGCAGG......................................................................... 19 1 18.00 2.00 2.00 14.00 0.00 ..............................CTAAGCACTAGTGCCGCAGGGG....................................................................... 22 1 18.00 0.00 0.00 18.00 0.00 ..............................CTAAGTACTAGTGCAGCAGGA........................................................................ 21 1 17.00 0.00 2.00 15.00 0.00 ..............................CTAAGAACTAGTGCCGCAGGCG....................................................................... 22 1 17.00 0.00 0.00 17.00 0.00 ..............................CTAAGTACTAGTGCCGCAGGCGT...................................................................... 23 1 17.00 0.00 6.00 11.00 0.00 ..............................TTAAGGACTAGTGCCGCAGGAG....................................................................... 22 1 16.00 0.00 1.00 15.00 0.00 ..............................CGAAGGACTAGTGCCGCAGGAG....................................................................... 22 1 16.00 0.00 0.00 16.00 0.00

droPer1 - 1 hit found