dme-mir-210- 12- and 20-way alignments

dme-mir-210	chrX:18022252-18022351 +	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 18022304-18022325
   star strand at position 18022267-18022289
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chrX:18022237-18022366 +	CCACGT---CC----GGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG--------------------------------CCAGCCATTGTTCCATC-
droSim1	chrX_random:4635946-4636075 +	CCACGT---CC----GGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG--------------------------------CCAGCCATTGTTCCATC-
droSec1	super_8:332193-332322 +	CCACGT---CC----GGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG--------------------------------CCAGCCATTGTTCCATC-
droYak2	chrX:16646312-16646441 +	CCATGT---CG----CGAACCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAA--------------------------------CCAGCCATCGTCCCATA-
droEre2	scaffold_4690:8350125-8350254 +	CCACGT---CG----CGAACCAAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAA--------------------------------CCAGCCATCGTCCCACA-
droAna3	scaffold_13335:1604006-1604112 -	GC------------G-----TTAACGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAAC----------------------------------------------CAATCA
dp4	chrXL_group3a:1970467-1970623 -	ATATGTGATTTAGCT-----CGATCGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGATTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAAA--CTAAACAAACCAAAAAGGAAGTTGAACGCC-----TAATGCAATC-
droPer1	super_11:2708510-2708666 +	ATATGTGATTTAGCT-----CGATCGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGATTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAAA--CTAAACAAACAAAAAAGGAAGTTGAACGCC-----TAATGCAATC-
droWil1	scaffold_181096:12033225-12033334 +	TCGCA----------AAAGCATAACGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCAGAAAACGACCA------------------------------------G--------------
droVir3	scaffold_12928:1257190-1257307 -	C--------------------GAGCGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTCA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGACCAGAGAAACAGCGAATAT----------------------------TTAACTATTTTTCC----
droMoj3	scaffold_6473:13732366-13732476 +	CCAGAT---CCATTGG-----GAACGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTCA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGATGCCAGAGAAGCAACA---------------------------------------------------
droGri2	scaffold_15203:8453529-8453644 +	TGGCG--------CT--CAATAATCGGAGCTTATTGGAGCTGCTGGCCACTGCACAAGATTAGATTCAAAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGACCAGATA----ACAT--------------------------------CAAGCCAT----------

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chrX:18022237-18022366 +	NA	CCA-----------------C------------------------------GT---CC-GGAA-CCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG------------------------------------------------------------------------------CCAGCCA-------------------------------TTGTTCCA--------------TC
droSim1	chrX_random:4635946-4636075 +	2	CCA-----------------C------------------------------GT---CC-GGAA-CCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG------------------------------------------------------------------------------CCAGCCA-------------------------------TTGTTCCA--------------TC
droSec1	super_8:332193-332322 +	1	CCA-----------------C------------------------------GT---CC-GGAA-CCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG------------------------------------------------------------------------------CCAGCCA-------------------------------TTGTTCCA--------------TC
droYak2	chrX:16646312-16646441 +	1	CCA-----------------T------------------------------GT---CG-CGAA-CCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAA------------------------------------------------------------------------------CCAGCCA-------------------------------TCGTCCCA--------------TA
droEre2	scaffold_4690:8350125-8350254 +	1	CCA-----------------C------------------------------GT---CG-CGAA-CCAAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAA------------------------------------------------------------------------------CCAGCCA-------------------------------TCGTCCCA--------------CA
droEug1	scf7180000408176:660268-660428 -	1	CTG-----------------C------------------------------GT---CG-CGAA-CCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGAATAGAAC---------------------------C--AAAA-AC--G----AGAACCAG---------CA-GCC-AACCAATCA-------------------------------TCATCCAA--------------TA
droBia1	scf7180000301760:580720-580858 -	2	CTG-----------------C------------------------------GC---CG-CGAG-CCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGA-----------------------G---------------------------GCAGCCAG---------CA-G-----CCAGCCA-------------------------------T----CCA--------------AT
droTak1	scf7180000415843:453822-453975 -	1	CTG-----------------C------------------------------GT---CG-CGAA-CCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGA-----------------------ACGGAACG---------------------------G---------AA-C-----CGA---A-------------------------------TCATCCAATAATCGAGGCTCCATC
droEle1	scf7180000491193:230657-230827 +	1	CTG-----------------C------------------------------GT---CG-CGAA-CCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGATTA--AC---CAGCACCACAAGCACCAAA--AGCACCAAA---A-------GCAGC-AG-------------------CAGCCA-------------------------------TCATCCAA--------------TA
droRho1	scf7180000779986:493851-494009 -	1	CTG-----------------C------------------------------GT---CG-CGAA-CCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGACTA--AC----------------------CAA-------CA-GCAGCAGAAGCAGC-AG---------CA-G------CCGCCA-------------------------------TCATCCAA--------------TA
droFic1	scf7180000453872:332227-332411 -	1	GTG-----------------C------------------------------GT---CG-CTCG-CCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGAACAGCACAGA-------------ACTGAACAAAAC--AAATC-CAG-----GCAGCCAGTCAGCCAGCCA-GCC-AGCCAGCCA-------------------------------GCAGCCCA--------------TC
droKik1	scf7180000302696:1725488-1725608 +	2	GAC-----------------T------------------------------CT---------A-TAAAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACTA--------------------------------------------------------------------------------AGTCA-------------------------------TCATGCCG----------------
droAna3	scaffold_13335:1603991-1604112 -	1	GC-------------------------------------------------GT-------------TAACGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACCAATCA--------------------ACTGA-----------------------------------------------------CCA-------------------------------CCAG---A--------------TC
droBip1	scf7180000395454:64412-64524 +	1	GTG-----------------T------------------------------TT---CAACGAGCGTTAACGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAAC----------------------------------------------------------------------------------------------------------------------------------------------
dp4	chrXL_group3a:1970441-1970623 -	1	ATA-----------------T------------------------------GT---GATTTAGCTCGATCGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGATTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAA-----------------------ACTAAACAAACC--AAAA-AG-------GAAGT-TG---------AACGCCTA-------ATGCAATCGATGAGTGTTGGGTTGCTTCA-----GTT-----------------TC
droPer1	super_11:2708510-2708698 +	1	ATA-----------------T------------------------------GT---GATTTAGCTCGATCGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGATTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAA-----------------------ACTAAACAAACA--AAAA-AG-------GAAGT-TG---------AACGCCTA-------ATGCAATCGATGAGTGTTGGGTTGCTTCAGTTTCATTCCA----------------
droWil1	scaffold_181096:12033222-12033334 +	1	CAA-----------------T------------------------------CG---CA-AAAG-CATAACGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTT--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCAGAAAACGACCAG--------------------------------------------------------------------------------------------------------------------------------------------
droVir3	scaffold_12928:1257190-1257317 -	2	T--------------------------------------------------AT---AT-TTAA-ACGAGCGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTC--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGACCAGAGAAACAGCGAAT-A--------------------------------------------------------------------T-----TTAACTA-------------------------------TTTTTCC-----------------
droMoj3	scaffold_6473:13732313-13732476 +	2	CCACATATACAGAGCATATATGTATATGCATATATCATACAAGTATATAGAATCCAGATCCATTGGGAACGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTC--AAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGATGCCAGAGAAGCAACA---------------------------------------------------------------------------------------------------------------------------------------------
droGri2	scaffold_15203:8453543-8453644 +	1	----------------------------------------------------------------------GGAGCTTATTGGAGCTGCTGGCCACTGCACAAGATTAGATTCAAAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGACCAGATAA----CAT------------------------------------------------------------------------------CAAGCCA-------------------------------T-----------------------

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

CCACGT---CC----GGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG--------------------------------CCAGCCATTGTTCCATC-

Size

Hit Count

Total Norm

droSim1

CCACGT---CC----GGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG--------------------------------CCAGCCATTGTTCCATC-	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
...........................................................................CTTGTGCGTGTGACAGCGGCT............................................................................	21	1	524740.00	5.00	522666.00	750.00	1319.00
...........................................................................CTTGTGCGTGTGACAGCGGCC............................................................................	21	1	87949.00	0.00	87664.00	92.00	193.00
............................................................................TTGTGCGTGTGACAGCGGCT............................................................................	20	1	86735.00	11.00	86067.00	430.00	227.00
...........................................................................CTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	47705.00	10.00	47476.00	89.00	130.00
............................................................................TTGTGCGTGTGACAGCGGCTA...........................................................................	21	1	38109.00	4.00	37967.00	48.00	90.00
...........................................................................CTTGTGCGTGTGACAGCGGCTT...........................................................................	22	1	32557.00	1.00	32406.00	59.00	91.00
...........................................................................CTTGTGCGTGTGACAGCGGCG............................................................................	21	1	17308.00	0.00	17206.00	47.00	55.00
...........................................................................CTTGTGCGTGTGACAGCGGC.............................................................................	20	1	16821.00	1.00	16756.00	20.00	44.00
............................................................................TTGTGCGTGTGACAGCGGCC............................................................................	20	1	14174.00	0.00	14107.00	51.00	16.00
............................................................................TTGTGCGTGTGACAGCGGCTT...........................................................................	21	1	6452.00	1.00	6416.00	20.00	15.00
............................................................................TTGTGCGTGTGACAGCGGC.............................................................................	19	1	4607.00	1.00	4585.00	14.00	7.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	3712.00	32.00	3663.00	5.00	12.00
............................................................................TTGTGCGTGTGACAGCGGCG............................................................................	20	1	2833.00	0.00	2795.00	21.00	17.00
...........................................................................CTTGTGCTTGTGACAGCGGCT............................................................................	21	1	2078.00	0.00	2059.00	1.00	18.00
............................................................................TTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	1886.00	29.00	1848.00	3.00	6.00
...........................................................................CTTGTGCGTTTGACAGCGGCT............................................................................	21	1	1601.00	0.00	1595.00	1.00	5.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAA..........................................................................	23	1	1453.00	1.00	1439.00	2.00	11.00
...........................................................................CTTGTGCGTGTGACATCGGCT............................................................................	21	1	1429.00	0.00	1423.00	1.00	5.00
...........................................................................CTTGTTCGTGTGACAGCGGCT............................................................................	21	1	1193.00	0.00	1188.00	0.00	5.00
...........................................................................CTTGTGCGTGTGACAGCGGAC............................................................................	21	1	1146.00	0.00	1145.00	0.00	1.00
.............................................................................CTTGCGTGTGACAGCGGCT............................................................................	19	1	1074.00	0.00	1067.00	2.00	5.00
...........................................................................CTTGTGCGTGTGACAGCGGCTC...........................................................................	22	1	1031.00	1.00	1026.00	2.00	2.00
...........................................................................CTTGTGCxTGTGACAGCGGCT............................................................................	20	1	1018.00	0.00	1010.00	1.00	7.00
...........................................................................CTTGTGCGGGTGACAGCGGCT............................................................................	21	1	985.00	0.00	985.00	0.00	0.00
...........................................................................CTTGTGCGCGTGACAGCGGCT............................................................................	21	1	952.00	0.00	949.00	1.00	2.00
...........................................................................CTTTTGCGTGTGACAGCGGCT............................................................................	21	1	899.00	0.00	897.00	0.00	2.00
...........................................................................CTTGTGCxxGTGACAGCGGCT............................................................................	19	1	747.00	0.00	745.00	0.00	2.00
...........................................................................CTTGTGCCTGTGACAGCGGCT............................................................................	21	1	724.00	0.00	721.00	1.00	2.00
............................................................................TTGTGCTTGTGACAGCGGCT............................................................................	20	1	667.00	0.00	661.00	2.00	4.00
...........................................................................CTTGTGCGTGTGGCAGCGGCT............................................................................	21	1	660.00	0.00	659.00	0.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAC..........................................................................	23	1	610.00	2.00	606.00	0.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGAC.............................................................................	20	1	573.00	0.00	571.00	0.00	2.00
...........................................................................CTTGTGCGTCTGACAGCGGCT............................................................................	21	1	562.00	0.00	560.00	1.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCTG...........................................................................	22	1	520.00	0.00	520.00	0.00	0.00
...........................................................................CTTGTGCGTGCGACAGCGGCT............................................................................	21	1	500.00	0.00	499.00	0.00	1.00
...........................................................................CTTGTGTGTGTGACAGCGGCT............................................................................	21	1	496.00	0.00	494.00	0.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATT.........................................................................	24	1	479.00	0.00	475.00	1.00	3.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATA.........................................................................	24	1	459.00	1.00	455.00	1.00	2.00
............................................................................TTGTGCGTTTGACAGCGGCT............................................................................	20	1	459.00	0.00	455.00	2.00	2.00
...........................................................................CCTGTGCGTGTGACAGCGGCT............................................................................	21	1	440.00	0.00	439.00	0.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCA............................................................................	21	1	426.00	0.00	425.00	0.00	1.00
...........................................................................CTTGTCCGTGTGACAGCGGCT............................................................................	21	1	420.00	0.00	419.00	0.00	1.00
...........................................................................CTTGTGCTTGTGACAGCGGCC............................................................................	21	1	405.00	0.00	405.00	0.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTT..........................................................................	23	1	402.00	0.00	400.00	2.00	0.00
..............................................................................CTGCGTGTGACAGCGGCT............................................................................	18	1	396.00	0.00	395.00	0.00	1.00
...........................................................................CTTGTxCGTGTGACAGCGGCT............................................................................	20	1	389.00	0.00	386.00	1.00	2.00
............................................................................TTGTGCGTGTGACATCGGCT............................................................................	20	1	349.00	0.00	347.00	2.00	0.00
...........................................................................CTTCTGCGTGTGACAGCGGCT............................................................................	21	1	343.00	0.00	341.00	1.00	1.00
............................................................................TTGTGCGTGTGACAGCGGCTATG.........................................................................	23	1	303.00	0.00	301.00	1.00	1.00
............................................................................TTGTGCxTGTGACAGCGGCT............................................................................	19	1	303.00	0.00	303.00	0.00	0.00
...........................................................................CTTGTGCGTGGGACAGCGGCT............................................................................	21	1	300.00	0.00	298.00	1.00	1.00
............................................................................TTGTGCGTGTGACAGCGGCTC...........................................................................	21	1	300.00	0.00	296.00	4.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAA..........................................................................	22	1	296.00	0.00	295.00	0.00	1.00
...........................................................................CTTGTGCGTGTGACGGCGGCT............................................................................	21	1	295.00	0.00	295.00	0.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTG...........................................................................	21	1	291.00	0.00	290.00	0.00	1.00
...........................................................................CTTGTGCGTTTGACAGCGGCC............................................................................	21	1	284.00	0.00	283.00	1.00	0.00
...........................................................................CTTGTGCGTGTCACAGCGGCT............................................................................	21	1	276.00	0.00	275.00	0.00	1.00
.............................................................................CTTGCGTGTGACAGCGGCTA...........................................................................	20	1	267.00	0.00	264.00	0.00	3.00
...........................................................................CTTGTGCATGTGACAGCGGCT............................................................................	21	1	262.00	0.00	261.00	1.00	0.00
...........................................................................CTTGTGCGTGTGACATCGGCC............................................................................	21	1	262.00	0.00	262.00	0.00	0.00
............................................................................TTGTGCGTGTGACAGCGGAC............................................................................	20	1	260.00	0.00	259.00	0.00	1.00
............................................................................CTTTGCGTGTGACAGCGGCT............................................................................	20	1	250.00	0.00	250.00	0.00	0.00
...........................................................................CTTGTACGTGTGACAGCGGCT............................................................................	21	1	236.00	0.00	235.00	1.00	0.00
..............................................................................TTGCGTGTGACAGCGGCTA...........................................................................	19	1	234.00	0.00	233.00	0.00	1.00
............................................................................TTGTGCCTGTGACAGCGGCT............................................................................	20	1	231.00	0.00	231.00	0.00	0.00
...........................................................................CTTGCGCGTGTGACAGCGGCT............................................................................	21	1	230.00	0.00	227.00	1.00	2.00
...........................................................................CTTGTGCGTxTGACAGCGGCT............................................................................	20	1	225.00	0.00	225.00	0.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATG.........................................................................	24	1	225.00	0.00	222.00	2.00	1.00
...........................................................................CTTGGGCGTGTGACAGCGGCT............................................................................	21	1	221.00	0.00	221.00	0.00	0.00
..............................................................................TTGCGTGTGACAGCGGCT............................................................................	18	1	220.00	0.00	218.00	0.00	2.00
............................................................................TTGTGCGCGTGACAGCGGCT............................................................................	20	1	208.00	0.00	208.00	0.00	0.00
...........................................................................CTTGTGCTTGTGACAGCGGCTT...........................................................................	22	1	204.00	0.00	202.00	0.00	2.00
............................................................................TTGTGCGTGTGACAGCGGCTATA.........................................................................	23	1	203.00	0.00	202.00	0.00	1.00
............................................................................TTGTGCxxGTGACAGCGGCT............................................................................	18	1	199.00	0.00	199.00	0.00	0.00
...........................................................................CTTGTxxGTGTGACAGCGGCT............................................................................	19	1	192.00	0.00	192.00	0.00	0.00
............................................................................TTGTTCGTGTGACAGCGGCT............................................................................	20	1	186.00	0.00	186.00	0.00	0.00
............................................................................TTTTGCGTGTGACAGCGGCT............................................................................	20	1	184.00	0.00	184.00	0.00	0.00
...........................................................................CTTGTTCGTGTGACAGCGGCC............................................................................	21	1	184.00	0.00	184.00	0.00	0.00
...........................................................................CTTGTGCGTGTGACAGCAGCT............................................................................	21	1	180.00	0.00	180.00	0.00	0.00
...........................................................................CTTGTGCGTGTGATAGCGGCT............................................................................	21	1	176.00	0.00	175.00	0.00	1.00
...........................................................................CTTGTGCGTGTTACAGCGGCT............................................................................	21	1	174.00	0.00	173.00	1.00	0.00
............................................................................TTGTGCGTGTGACAGCGAC.............................................................................	19	1	173.00	0.00	173.00	0.00	0.00
...........................................................................CTTATGCGTGTGACAGCGGCT............................................................................	21	1	173.00	0.00	172.00	1.00	0.00
...........................................................................CTTGTGCGTGTGACGGCT...............................................................................	18	1	168.00	0.00	167.00	0.00	1.00
...........................................................................CTTTTGCGTGTGACAGCGGCTA...........................................................................	22	1	167.00	0.00	167.00	0.00	0.00
............................................................................TTGTGCGTCTGACAGCGGCT............................................................................	20	1	164.00	0.00	163.00	0.00	1.00
...........................................................................CTTGTGCGTGTGGCAGCGGCC............................................................................	21	1	162.00	0.00	160.00	0.00	2.00
............................................................................TTTTGCGTGTGACAGCGGCTA...........................................................................	21	1	159.00	0.00	158.00	1.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACC.........................................................................	24	1	154.00	0.00	151.00	1.00	2.00
...........................................................................CTTGTGCGTGTGGCAGCGGCTT...........................................................................	22	1	152.00	0.00	151.00	0.00	1.00
...........................................................................CTTGTGCxTGTGACAGCGGCC............................................................................	20	1	152.00	0.00	151.00	0.00	1.00
...........................................................................CTTGTGCGTGTGACAGTGGCT............................................................................	21	1	149.00	0.00	149.00	0.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGACT............................................................................	21	1	147.00	0.00	147.00	0.00	0.00
...........................................................................CTTGTGCGTGTGACACCGGCT............................................................................	21	1	147.00	0.00	147.00	0.00	0.00
...........................................................................CTTGTGCGTGTAACAGCGGCT............................................................................	21	1	143.00	0.00	143.00	0.00	0.00
............................................................................TTGTGCGGGTGACAGCGGCT............................................................................	20	1	142.00	0.00	142.00	0.00	0.00
...........................................................................CTTGTGCGTATGACAGCGGCT............................................................................	21	1	141.00	0.00	141.00	0.00	0.00
............................................................................TTGTGCGTTTGACAGCGGCTA...........................................................................	21	1	139.00	0.00	138.00	0.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGG.............................................................................	20	1	138.00	0.00	133.00	2.00	3.00
...........................................................................CTTTTGCGTGTGACAGCGGCC............................................................................	21	1	132.00	0.00	132.00	0.00	0.00
..............................................................................CTGCGTGTGACAGCGGCTA...........................................................................	19	1	129.00	0.00	129.00	0.00	0.00

droSec1

CCACGT---CC----GGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG--------------------------------CCAGCCATTGTTCCATC-	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
...........................................................................CTTGTGCGTGTGACAGCGGCT............................................................................	21	1	128751.00	393.00	124.00	128234.00
............................................................................TTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	59465.00	162.00	134.00	59169.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	57140.00	142.00	123.00	56875.00
...........................................................................CTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	32192.00	55.00	40.00	32097.00
............................................................................TTGTGCGTGTGACAGCGGCT............................................................................	20	1	31314.00	661.00	55.00	30598.00
............................................................................TTGTGCGTGTGACAGCGGCTA...........................................................................	21	1	30387.00	104.00	44.00	30239.00
...........................................................................CTTGTGCGTGTGACAGCGGC.............................................................................	20	1	28191.00	75.00	29.00	28087.00
...........................................................................CTTGTGCGTGTGACAGCGGCTT...........................................................................	22	1	13944.00	37.00	14.00	13893.00
............................................................................TTGTGCGTGTGACAGCGGCTT...........................................................................	21	1	6925.00	48.00	5.00	6872.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAC..........................................................................	23	1	6379.00	17.00	17.00	6345.00
...........................................................................CTTGTGCGTGTGACAGCGG..............................................................................	19	1	5829.00	15.00	7.00	5807.00
............................................................................TTGTGCGTGTGACAGCGGC.............................................................................	19	1	4601.00	13.00	5.00	4583.00
...........................................................................CTTGTGCGTGTGACAGCGGCA............................................................................	21	1	3971.00	14.00	5.00	3952.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAA..........................................................................	23	1	2422.00	6.00	3.00	2413.00
............................................................................TTGTGCGTGTGACAGCGGCTAA..........................................................................	22	1	2154.00	4.00	4.00	2146.00
............................................................................TTGTGCGTGTGACAGCGGCTATT.........................................................................	23	1	2064.00	3.00	0.00	2061.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATT.........................................................................	24	1	1545.00	2.00	6.00	1537.00
............................................................................TTGTGCGTGTGACAGCGGCTATA.........................................................................	23	1	1329.00	3.00	3.00	1323.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTT..........................................................................	23	1	1318.00	6.00	1.00	1311.00
...........................................................................CTTGTGCGTGTGACAGCGGT.............................................................................	20	1	1315.00	2.00	1.00	1312.00
...........................................................................CTTGTGCGTGTGACAGCGGA.............................................................................	20	1	1307.00	3.00	2.00	1302.00
............................................................................TTGTGCGTGTGACAGCGGCTTT..........................................................................	22	1	1298.00	5.00	2.00	1291.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACC.........................................................................	24	1	1249.00	2.00	11.00	1236.00
............................................................................TTGTGCGTGTGACAGCGGCTAC..........................................................................	22	1	1174.00	2.00	4.00	1168.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATA.........................................................................	24	1	826.00	3.00	1.00	822.00
............................................................................TTGTGCGTGTGACAGCGGT.............................................................................	19	1	766.00	2.00	0.00	764.00
............................................................................TTGTGCGTGTGACAGCGGCTAG..........................................................................	22	1	755.00	1.00	0.00	754.00
............................................................................TTGTGCGTGTGACAGCGG..............................................................................	18	1	643.00	1.00	0.00	642.00
...........................................................................CTTGTGCGTGTGACAGCGGTT............................................................................	21	1	603.00	6.00	0.00	597.00
............................................................................TTGTGCGTGTGACAGCGGTTT...........................................................................	21	1	595.00	9.00	1.00	585.00
............................................................................TTGTGCGTGTGACAGCGGA.............................................................................	19	1	503.00	3.00	0.00	500.00
...........................................................................CTTGTGCGTGTGACAGCGGTTT...........................................................................	22	1	444.00	4.00	0.00	440.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAG..........................................................................	23	1	443.00	0.00	1.00	442.00
............................................................................TTGTGCGTGTGACAGCGGCTATTT........................................................................	24	1	421.00	1.00	0.00	420.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACA.........................................................................	24	1	411.00	1.00	2.00	408.00
............................................................................TTGTGCGTGTGACAGCGGCA............................................................................	20	1	405.00	2.00	0.00	403.00
............................................................................TTGTGCGTGTGACAGCGTA.............................................................................	19	1	361.00	1.00	0.00	360.00
............................................................................TTGTGCGTGTGACAGCGGTT............................................................................	20	1	355.00	5.00	0.00	350.00
............................................................................TTGTGCGTGTGACAGCGTT.............................................................................	19	1	336.00	1.00	1.00	334.00
............................................................................TTGTGCGTGTGACAGCGGCTTA..........................................................................	22	1	328.00	3.00	0.00	325.00
...........................................................................CTTGTGCGTGTGACAGCGGAT............................................................................	21	1	321.00	3.00	0.00	318.00
............................................................................TTGTGCGTGTGACAGCGGCTATG.........................................................................	23	1	307.00	0.00	1.00	306.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTA..........................................................................	23	1	302.00	0.00	0.00	302.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATTT........................................................................	25	1	272.00	0.00	0.00	272.00
...........................................................................CTTGTGCGTGTGACAGCTGCT............................................................................	21	1	262.00	1.00	0.00	261.00
...........................................................................CTTGTGCGTGTGACAGCGGCTC...........................................................................	22	1	260.00	0.00	0.00	260.00
.....................................AGCTGCTGGCCACTGCACAAGA.................................................................................................................	22	1	253.00	0.00	4.00	249.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAAA.........................................................................	24	1	249.00	0.00	0.00	249.00
...........................................................................CTTGTGCGTGTGACAGCGGCTG...........................................................................	22	1	245.00	0.00	0.00	245.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATAA........................................................................	25	1	244.00	1.00	1.00	242.00
...........................................................................CTTGTGCGCGTGACAGCGGCT............................................................................	21	1	240.00	1.00	2.00	237.00
...........................................................................CTTGTACGTGTGACAGCGGCT............................................................................	21	1	239.00	0.00	0.00	239.00
...........................................................................CTTGTGCGTGTGACAGCGGAA............................................................................	21	1	235.00	0.00	0.00	235.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTTT.........................................................................	24	1	224.00	0.00	0.00	224.00
...........................................................................CTTGTGAGTGTGACAGCGGCT............................................................................	21	1	222.00	1.00	0.00	221.00
...........................................................................CTTGTGCGTGTGACAGCG...............................................................................	18	1	208.00	0.00	0.00	208.00
............................................................................TTGTGCGTGTGACAGCGGCTAAA.........................................................................	23	1	207.00	0.00	0.00	207.00
............................................................................TTGTGCGTGTGACAGCTGCTAT..........................................................................	22	1	206.00	0.00	0.00	206.00
...........................................................................CTTGTGCGTGCGACAGCGGCT............................................................................	21	1	204.00	0.00	0.00	204.00
............................................................................TTGTGCGTGTGACAGCGGCTATAT........................................................................	24	1	198.00	0.00	0.00	198.00
...........................................................................CTTGTGCATGTGACAGCGGCT............................................................................	21	1	192.00	0.00	0.00	192.00
............................................................................TTGTGCGTGTGACAGCGGCTAGA.........................................................................	23	1	192.00	1.00	0.00	191.00
...........................................................................CTTGCGCGTGTGACAGCGGCT............................................................................	21	1	188.00	1.00	1.00	186.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATG.........................................................................	24	1	187.00	0.00	0.00	187.00
.....................................AGCTGCTGGCCACTGCACAAGAT................................................................................................................	23	1	176.00	0.00	2.00	174.00
............................................................................TTGTGCGTGTGACAGCGGCTTTT.........................................................................	23	1	175.00	1.00	0.00	174.00
...........................................................................CTTGTGCGTGTGACAGCGGTA............................................................................	21	1	173.00	0.00	0.00	173.00
............................................................................TTGTGCGTGTGACAGCGGTTA...........................................................................	21	1	170.00	3.00	0.00	167.00
...........................................................................CTTGTGCGTGTGACAGCGGCC............................................................................	21	1	170.00	0.00	1.00	169.00
...........................................................................CTTGTTCGTGTGACAGCGGCT............................................................................	21	1	167.00	2.00	2.00	163.00
.............................................................................CTTGCGTGTGACAGCGGCT............................................................................	19	1	165.00	0.00	1.00	164.00
...........................................................................ATTGTGCGTGTGACAGCGGCT............................................................................	21	1	164.00	0.00	0.00	164.00
...........................................................................CTTGTGCGTGTGGCAGCGGCT............................................................................	21	1	164.00	0.00	0.00	164.00
...........................................................................CTTGTGCGTGTGACAGCGGCG............................................................................	21	1	163.00	0.00	0.00	163.00
............................................................................TTGTGCGTGTGACAGCGGCTC...........................................................................	21	1	163.00	2.00	0.00	161.00
............................................................................TTGTGCGTGTGACAGCGGCTATAA........................................................................	24	1	162.00	1.00	0.00	161.00
...........................................................................CTTGTGCGTGTGACAGCGACT............................................................................	21	1	156.00	5.00	0.00	151.00
...........................................................................CTTGTGCGTGTGACATCGGCT............................................................................	21	1	152.00	0.00	0.00	152.00
...........................................................................CTTGTGCGTATGACAGCGGCT............................................................................	21	1	149.00	0.00	0.00	149.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATAT........................................................................	25	1	149.00	2.00	0.00	147.00
...........................................................................CTTGTGCGTGTGACAGCTGCTAT..........................................................................	23	1	149.00	0.00	0.00	149.00
...........................................................................CTTGTGTGTGTGACAGCGGCT............................................................................	21	1	149.00	0.00	2.00	147.00
...........................................................................CTTGTCCGTGTGACAGCGGCT............................................................................	21	1	146.00	1.00	0.00	145.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACT.........................................................................	24	1	143.00	0.00	0.00	143.00
...........................................................................CCTGTGCGTGTGACAGCGGCT............................................................................	21	1	141.00	0.00	0.00	141.00
............................................................................TTGTGCGTGTGACAGCGGAT............................................................................	20	1	139.00	7.00	0.00	132.00
...........................................................................CTTGTGCGTGTGACAGCAGCT............................................................................	21	1	139.00	0.00	0.00	139.00
............................................................................TTGCGCGTGTGACAGCGGCTAT..........................................................................	22	1	135.00	0.00	0.00	135.00
..............................................................................TTGCGTGTGACAGCGGCTAT..........................................................................	20	1	134.00	0.00	1.00	133.00
...........................................................................CTTGTGCGTGTGACGGCGGCT............................................................................	21	1	133.00	0.00	0.00	133.00
...........................................................................CTTGTGCGTGTGACAGCGCCT............................................................................	21	1	132.00	7.00	0.00	125.00
.............................................................................TGTGCGTGTGACAGCGGCTAT..........................................................................	21	1	129.00	1.00	0.00	128.00
...........................................................................CTTGTGCGTGTGACAGCGTCT............................................................................	21	1	128.00	2.00	0.00	126.00
...........................................................................CTTGTGCGTGTGACCGCGGCT............................................................................	21	1	127.00	0.00	0.00	127.00
...........................................................................CTTATGCGTGTGACAGCGGCT............................................................................	21	1	123.00	0.00	0.00	123.00
...........................................................................CTTGTGCGTGTGACAGCGCT.............................................................................	20	1	120.00	0.00	0.00	120.00
............................................................................TTGTGCTTGTGACAGCGGCTAT..........................................................................	22	1	120.00	1.00	0.00	119.00
............................................................................TTGTGCGTGTGACAGCGGCTG...........................................................................	21	1	117.00	0.00	0.00	117.00
...........................................................................CTTGTGCGTGTGACAGCGGTTA...........................................................................	22	1	116.00	0.00	0.00	116.00
...........................................................................CTTGTGCGTGTGACAGCGGTAA...........................................................................	22	1	114.00	0.00	0.00	114.00
...........................................................................CTTGTGCGTGTGACAGCGTT.............................................................................	20	1	110.00	0.00	0.00	110.00

droYak2

CCATGT---CG----CGAACCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAA--------------------------------CCAGCCATCGTCCCATA-	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
...........................................................................CTTGTGCGTGTGACAGCGGCT............................................................................	21	1	162775.00	3.00	39959.00	432.00	58282.00	64099.00
............................................................................TTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	99456.00	20.00	43495.00	490.00	55077.00	374.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	95052.00	16.00	38500.00	444.00	54905.00	1187.00
............................................................................TTGTGCGTGTGACAGCGGCT............................................................................	20	1	63225.00	3.00	20486.00	738.00	27824.00	14174.00
............................................................................TTGTGCGTGTGACAGCGGCTA...........................................................................	21	1	49852.00	5.00	18620.00	260.00	24635.00	6332.00
...........................................................................CTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	47551.00	2.00	14129.00	188.00	22141.00	11091.00
...........................................................................CTTGTGCGTGTGACAGCGGCTT...........................................................................	22	1	14782.00	0.00	3755.00	60.00	6741.00	4226.00
...........................................................................CTTGTGCGTGTGACAGCGGC.............................................................................	20	1	14052.00	2.00	4904.00	84.00	6804.00	2258.00
...........................................................................CTTGTGCGTGTGACAGCGGCC............................................................................	21	1	12651.00	0.00	71.00	0.00	141.00	12439.00
............................................................................TTGTGCGTGTGACAGCGGCTT...........................................................................	21	1	7002.00	0.00	2344.00	49.00	3684.00	925.00
............................................................................TTGTGCGTGTGACAGCGGC.............................................................................	19	1	5579.00	0.00	2357.00	32.00	2613.00	577.00
...........................................................................CTTGTGCGTGTGACAGCGGCTCT..........................................................................	23	1	3298.00	0.00	740.00	2.00	2552.00	4.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAA..........................................................................	23	1	3132.00	1.00	1311.00	14.00	1519.00	287.00
............................................................................TTGTGCGTGTGACAGCGGCC............................................................................	20	1	2782.00	0.00	31.00	0.00	48.00	2703.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATT.........................................................................	24	1	2716.00	0.00	743.00	14.00	1545.00	414.00
...........................................................................CTTGTGCGTGTGACAGCGGCG............................................................................	21	1	2568.00	0.00	62.00	0.00	104.00	2402.00
...........................................................................CTTGTGCGTGTGACAGCGGCTC...........................................................................	22	1	2545.00	0.00	716.00	0.00	1702.00	127.00
............................................................................TTGTGCGTGTGACAGCGGCTATT.........................................................................	23	1	2520.00	0.00	833.00	23.00	1623.00	41.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTT..........................................................................	23	1	2346.00	0.00	769.00	4.00	1505.00	68.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAC..........................................................................	23	1	2254.00	0.00	929.00	5.00	1270.00	50.00
............................................................................TTGTGCGTGTGACAGCGGCTCT..........................................................................	22	1	2038.00	1.00	454.00	0.00	1580.00	3.00
............................................................................TTGTGCGTGTGACAGCGGCTAA..........................................................................	22	1	2014.00	0.00	972.00	12.00	990.00	40.00
............................................................................TTGTGCGTGTGACAGCGGCTTT..........................................................................	22	1	1851.00	0.00	636.00	15.00	1197.00	3.00
............................................................................TTGTGCGTGTGACAGCGGCTC...........................................................................	21	1	1613.00	0.00	648.00	0.00	907.00	58.00
...........................................................................CTTGTGCGTGTGACAGCGG..............................................................................	19	1	1448.00	1.00	568.00	11.00	858.00	10.00
............................................................................TTGTGCGTGTGACAGCGGCTATA.........................................................................	23	1	1236.00	0.00	542.00	8.00	630.00	56.00
............................................................................TTGTGCGTGTGACAGCGGCTAC..........................................................................	22	1	1132.00	0.00	452.00	0.00	660.00	20.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATA.........................................................................	24	1	1032.00	0.00	391.00	8.00	446.00	187.00
............................................................................TTGTGCGTGTGACAGCGGT.............................................................................	19	1	960.00	0.00	391.00	3.00	563.00	3.00
...........................................................................CTTGTGCGTGTGACCGCGGCT............................................................................	21	1	865.00	0.00	209.00	1.00	650.00	5.00
...........................................................................CTTGTGCGTGTGACAGCGGCA............................................................................	21	1	734.00	0.00	285.00	5.00	414.00	30.00
............................................................................TTGTGCGTGTGACAGCGG..............................................................................	18	1	717.00	0.00	294.00	2.00	418.00	3.00
...........................................................................CTTGTGCGTGTGCCAGCGGCT............................................................................	21	1	675.00	0.00	47.00	1.00	622.00	5.00
...........................................................................CTTGTGCGTGTGACCGCGGCTAT..........................................................................	23	1	673.00	0.00	182.00	3.00	488.00	0.00
............................................................................TTGTGCGTGTGACAGCGTT.............................................................................	19	1	614.00	0.00	227.00	3.00	383.00	1.00
............................................................................TTGTGCGTGTGCCAGCGGCTAT..........................................................................	22	1	571.00	0.00	97.00	0.00	473.00	1.00
............................................................................TTGGGCGTGTGACAGCGGCTAT..........................................................................	22	1	563.00	0.00	123.00	0.00	440.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCG............................................................................	20	1	561.00	0.00	19.00	0.00	30.00	512.00
...........................................................................CTTGTGCGTGTGCCAGCGGCTAT..........................................................................	23	1	518.00	0.00	43.00	2.00	473.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAG..........................................................................	22	1	518.00	0.00	191.00	4.00	323.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGT.............................................................................	20	1	510.00	0.00	198.00	2.00	308.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGTCT............................................................................	21	1	478.00	0.00	90.00	0.00	388.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAG..........................................................................	23	1	469.00	0.00	177.00	1.00	286.00	5.00
...........................................................................CTTGTGCGTGTGTCAGCGGCT............................................................................	21	1	454.00	0.00	97.00	0.00	351.00	6.00
...........................................................................CTTGTGCGTGTGACATCGGCT............................................................................	21	1	397.00	0.00	89.00	0.00	166.00	142.00
............................................................................TTGCGCGTGTGACAGCGGCTAT..........................................................................	22	1	391.00	0.00	138.00	3.00	250.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATC.........................................................................	24	1	387.00	0.00	125.00	0.00	246.00	16.00
............................................................................TTGTGCGTGTGACAGCGGCTATC.........................................................................	23	1	374.00	0.00	136.00	0.00	233.00	5.00
............................................................................TTGTGCGTGTGACAGCGTCTAT..........................................................................	22	1	374.00	0.00	96.00	1.00	277.00	0.00
...........................................................................CTTGTGCGTGTGACAGCTGCT............................................................................	21	1	371.00	0.00	163.00	1.00	203.00	4.00
...........................................................................CTTGTGCGTGTGACAGCGTCTAT..........................................................................	23	1	360.00	0.00	73.00	0.00	285.00	2.00
............................................................................TTGTGCGTGTGACAGCGGCTGT..........................................................................	22	1	335.00	0.00	68.00	0.00	267.00	0.00
...........................................................................CTTGGGCGTGTGACAGCGGCT............................................................................	21	1	331.00	0.00	54.00	1.00	245.00	31.00
............................................................................TTGTGCGTGTGACCGCGGCTAT..........................................................................	22	1	327.00	0.00	72.00	0.00	255.00	0.00
...........................................................................CTTGTGCGTGCGACAGCGGCT............................................................................	21	1	327.00	0.00	88.00	1.00	183.00	55.00
...........................................................................CTTGTGCTTGTGACAGCGGCT............................................................................	21	1	326.00	0.00	42.00	0.00	79.00	205.00
............................................................................TTGTGCGTTTGACAGCGGCTAT..........................................................................	22	1	306.00	0.00	197.00	0.00	105.00	4.00
............................................................................TTGTGCGTGTGCCAGCGGCT............................................................................	20	1	305.00	0.00	42.00	0.00	234.00	29.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATTT........................................................................	25	1	303.00	0.00	86.00	4.00	210.00	3.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTTT.........................................................................	24	1	293.00	0.00	86.00	2.00	197.00	8.00
............................................................................TTGGGCGTGTGACAGCGGCT............................................................................	20	1	291.00	0.00	48.00	1.00	236.00	6.00
...........................................................................CTTGTGCGTGTGACAGCGGTT............................................................................	21	1	291.00	0.00	85.00	0.00	199.00	7.00
...........................................................................CTTGTGCGCGTGACAGCGGCT............................................................................	21	1	286.00	0.00	37.00	1.00	135.00	113.00
...........................................................................CTTGTGCGTTTGACAGCGGCT............................................................................	21	1	282.00	0.00	38.00	0.00	95.00	149.00
...........................................................................CTTGTGCGTGTGACAGCGGCTG...........................................................................	22	1	281.00	0.00	51.00	0.00	123.00	107.00
...........................................................................CTTGTGCGTGTGACAGAGGCT............................................................................	21	1	274.00	0.00	52.00	0.00	203.00	19.00
...........................................................................CTTGGGCGTGTGACAGCGGCTAT..........................................................................	23	1	271.00	0.00	33.00	0.00	236.00	2.00
...........................................................................CTTGTGCGTGTGGCAGCGGCT............................................................................	21	1	271.00	0.00	70.00	2.00	136.00	63.00
............................................................................TTGTGCGTGTGACAGCGGCTATTT........................................................................	24	1	269.00	0.00	93.00	2.00	174.00	0.00
...........................................................................CTTGTGCGTGTGACAGCTGCTAT..........................................................................	23	1	267.00	0.00	126.00	1.00	139.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCTGT..........................................................................	23	1	265.00	0.00	59.00	0.00	206.00	0.00
...........................................................................CTTGTGCGTGTGACGGCGGCT............................................................................	21	1	263.00	0.00	51.00	0.00	164.00	48.00
...........................................................................CTTGTGCGTGTGACCGCGGCTA...........................................................................	22	1	262.00	0.00	76.00	0.00	185.00	1.00
...........................................................................CTTGCGCGTGTGACAGCGGCT............................................................................	21	1	259.00	0.00	40.00	2.00	183.00	34.00
...........................................................................CTTGTGCGTGTGTCAGCGGCTAT..........................................................................	23	1	256.00	0.00	57.00	0.00	199.00	0.00
...........................................................................CTTGTGCGTGGGACAGCGGCT............................................................................	21	1	252.00	0.00	63.00	0.00	177.00	12.00
............................................................................TTGTGCGTGTGACAGCGGTT............................................................................	20	1	251.00	0.00	88.00	0.00	161.00	2.00
...........................................................................CTTGTGCGTGCGACAGCGGCTAT..........................................................................	23	1	248.00	0.00	76.00	0.00	171.00	1.00
............................................................................TTGTGCGTGCGACAGCGGCTAT..........................................................................	22	1	244.00	0.00	75.00	1.00	168.00	0.00
............................................................................TTGTGCGTGTGCCAGCGGCTA...........................................................................	21	1	243.00	0.00	38.00	0.00	191.00	14.00
............................................................................TTGCGCGTGTGACAGCGGCT............................................................................	20	1	240.00	0.00	74.00	2.00	155.00	9.00
............................................................................TTGTGCGTGTGACATCGGCTAT..........................................................................	22	1	233.00	0.00	87.00	0.00	140.00	6.00
...........................................................................ATTGTGCGTGTGACAGCGGCT............................................................................	21	1	232.00	0.00	49.00	0.00	181.00	2.00
...........................................................................CTTGTGCGTGTGACAGAGGCTAT..........................................................................	23	1	231.00	0.00	59.00	0.00	172.00	0.00
...........................................................................CTTGTGCGTGTTACAGCGGCT............................................................................	21	1	231.00	0.00	64.00	0.00	150.00	17.00
............................................................................TTGTGCGTTTGACAGCGGCT............................................................................	20	1	223.00	0.00	103.00	0.00	58.00	62.00
............................................................................TTGGGCGTGTGACAGCGGCTA...........................................................................	21	1	212.00	0.00	40.00	1.00	165.00	6.00
...........................................................................CTTGTGAGTGTGACAGCGGCT............................................................................	21	1	207.00	0.00	35.00	0.00	134.00	38.00
...........................................................................CTTGTGCGTGTGACATCGGCTAT..........................................................................	23	1	204.00	0.00	83.00	0.00	115.00	6.00
............................................................................TTGTGCGTGTGACAGCGGCTG...........................................................................	21	1	203.00	0.00	42.00	0.00	107.00	54.00
...........................................................................CTTGTGCGTGGGACAGCGGCTAT..........................................................................	23	1	202.00	0.00	49.00	0.00	152.00	1.00
............................................................................TTGTGCGTGTGACAGCGGCTATG.........................................................................	23	1	202.00	0.00	44.00	0.00	79.00	79.00
...........................................................................CTTGTGCGTGTGAAAGCGGCT............................................................................	21	1	200.00	0.00	59.00	0.00	133.00	8.00
............................................................................TTGTGCGTGTGACAGCTGCTAT..........................................................................	22	1	198.00	0.00	84.00	0.00	114.00	0.00
............................................................................TTGTGCGTGTGACAGAGGCTAT..........................................................................	22	1	195.00	0.00	57.00	0.00	138.00	0.00
...........................................................................CTTGTGCGCGTGACAGCGGCTAT..........................................................................	23	1	194.00	0.00	65.00	1.00	125.00	3.00
...........................................................................CTTGTGCGTGTGCCAGCGGCTA...........................................................................	22	1	193.00	0.00	19.00	1.00	172.00	1.00
............................................................................TTGTGCGTGTGGCAGCGGCTAT..........................................................................	22	1	192.00	0.00	66.00	0.00	126.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAAA.........................................................................	23	1	185.00	0.00	63.00	2.00	118.00	2.00
............................................................................TTGTGCGTGGGACAGCGGCTAT..........................................................................	22	1	185.00	0.00	46.00	1.00	138.00	0.00
............................................................................TTGTGCGTGTGACAGCGT..............................................................................	18	1	184.00	0.00	79.00	0.00	104.00	1.00

droEre2

CCACGT---CG----CGAACCAAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAA--------------------------------CCAGCCATCGTCCCACA-	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
............................................................................TTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	176415.00	37.00	44777.00	7.00	131594.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	170357.00	18.00	34656.00	12.00	135671.00
...........................................................................CTTGTGCGTGTGACAGCGGCT............................................................................	21	1	142191.00	18.00	34168.00	9.00	107996.00
............................................................................TTGTGCGTGTGACAGCGGCTA...........................................................................	21	1	58872.00	5.00	14750.00	6.00	44111.00
............................................................................TTGTGCGTGTGACAGCGGCT............................................................................	20	1	58180.00	8.00	13690.00	2.00	44480.00
...........................................................................CTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	54593.00	5.00	11553.00	5.00	43030.00
...........................................................................CTTGTGCGTGTGACAGCGGC.............................................................................	20	1	43187.00	3.00	5883.00	1.00	37300.00
............................................................................TTGTGCGTGTGACAGCGGC.............................................................................	19	1	24840.00	1.00	3207.00	0.00	21632.00
...........................................................................CTTGTGCGTGTGACAGCGGCTT...........................................................................	22	1	7814.00	1.00	1614.00	0.00	6199.00
...........................................................................CTTGTGCGTGTGACAGCGG..............................................................................	19	1	7656.00	0.00	672.00	0.00	6984.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATT.........................................................................	24	1	7296.00	0.00	975.00	0.00	6321.00
............................................................................TTGTGCGTGTGACAGCGGCTATT.........................................................................	23	1	6852.00	0.00	1245.00	1.00	5606.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAA..........................................................................	23	1	4911.00	1.00	772.00	0.00	4138.00
............................................................................TTGTGCGTGTGACAGCGG..............................................................................	18	1	4279.00	0.00	252.00	0.00	4027.00
............................................................................TTGTGCGTGTGACAGCGGCTT...........................................................................	21	1	4132.00	1.00	902.00	0.00	3229.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAC..........................................................................	23	1	3702.00	4.00	597.00	2.00	3099.00
............................................................................TTGTGCGTGTGACAGCGGT.............................................................................	19	1	3240.00	1.00	600.00	0.00	2639.00
............................................................................TTGTGCGTGTGACAGCGGCTAA..........................................................................	22	1	2973.00	1.00	713.00	0.00	2259.00
............................................................................TTGTGCGTGTGACAGCGGCTATA.........................................................................	23	1	2500.00	0.00	470.00	0.00	2030.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAG..........................................................................	23	1	2440.00	0.00	233.00	0.00	2207.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATA.........................................................................	24	1	2397.00	2.00	360.00	0.00	2035.00
............................................................................TTGTGCGTGTGACAGCGTT.............................................................................	19	1	2366.00	0.00	355.00	0.00	2011.00
............................................................................TTGTGCGTGTGACAGCGGCTAG..........................................................................	22	1	2210.00	1.00	321.00	0.00	1888.00
...........................................................................CTTGTGCGTGTGACAGCGGCA............................................................................	21	1	2121.00	0.00	314.00	0.00	1807.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATTT........................................................................	25	1	1520.00	0.00	183.00	0.00	1337.00
............................................................................TTGTGCGTGTGACAGCTGCTAT..........................................................................	22	1	1511.00	0.00	108.00	0.00	1403.00
...........................................................................CTTGTGCGTGTGACAGCTGCT............................................................................	21	1	1446.00	0.00	82.00	0.00	1364.00
...........................................................................CTTGTGCGTGTGACAGCG...............................................................................	18	1	1411.00	0.00	86.00	0.00	1325.00
...........................................................................CTTGTGCGTGTGACAGCTGCTAT..........................................................................	23	1	1392.00	1.00	82.00	0.00	1309.00
...........................................................................ATTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	1372.00	0.00	22.00	0.00	1350.00
............................................................................TTGTGCGTGTGACAGCGGCTATTT........................................................................	24	1	1264.00	0.00	166.00	0.00	1098.00
............................................................................TTGTGCGTGTGACAGCGGTT............................................................................	20	1	1224.00	0.00	269.00	0.00	955.00
...........................................................................CTTGTGCGTGTGACAGCGGT.............................................................................	20	1	1222.00	0.00	233.00	0.00	989.00
............................................................................TTGTGCGTGTGACAGCGGTTT...........................................................................	21	1	1201.00	0.00	127.00	0.00	1074.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTT..........................................................................	23	1	1156.00	0.00	281.00	0.00	875.00
...........................................................................ATTGTGCGTGTGACAGCGGCT............................................................................	21	1	1148.00	0.00	28.00	0.00	1120.00
...........................................................................CTTGTGCGTGTTACAGCGGCTAT..........................................................................	23	1	1080.00	1.00	47.00	0.00	1032.00
............................................................................TTGTGCGTGTGACAGCGGCTATG.........................................................................	23	1	1057.00	0.00	90.00	0.00	967.00
............................................................................TTGTGCGTGTTACAGCGGCTAT..........................................................................	22	1	1054.00	0.00	73.00	0.00	981.00
...........................................................................CTTGTGCGTGTTACAGCGGCT............................................................................	21	1	975.00	0.00	58.00	0.00	917.00
.....................................AGCTGCTGGCCACTGCACAAGA.................................................................................................................	22	1	952.00	0.00	67.00	0.00	885.00
............................................................................TTGTGCGTGTGACATCGGCTAT..........................................................................	22	1	924.00	0.00	143.00	0.00	781.00
...........................................................................CTTGTGCGTGTGACAGCGGCTCT..........................................................................	23	1	901.00	0.00	754.00	1.00	146.00
...........................................................................CTTGTGCGTGTGACATCGGCTAT..........................................................................	23	1	899.00	0.00	90.00	0.00	809.00
............................................................................TTGTGCGTGTGACAGCGGCTAC..........................................................................	22	1	898.00	3.00	359.00	1.00	535.00
............................................................................TTGTGCGTGTGACAGCGGCTCT..........................................................................	22	1	885.00	0.00	769.00	0.00	116.00
............................................................................TTGTGCGTGTGACAGCGGCTTT..........................................................................	22	1	876.00	0.00	288.00	0.00	588.00
...........................................................................CTTGTGCGTGTGACAGCGTT.............................................................................	20	1	832.00	0.00	132.00	0.00	700.00
............................................................................TTGTGCGTGTGACAGCGGATAT..........................................................................	22	1	819.00	0.00	52.00	0.00	767.00
...........................................................................CTTGTGCGTGTGACAGCGGATAT..........................................................................	23	1	801.00	0.00	20.00	0.00	781.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATG.........................................................................	24	1	800.00	0.00	68.00	0.00	732.00
............................................................................TTGTGCGTGTGACAGCGTCTAT..........................................................................	22	1	795.00	0.00	172.00	0.00	623.00
...........................................................................CTTGTGCGTGTGACAGCGTCTAT..........................................................................	23	1	741.00	0.00	144.00	0.00	597.00
...........................................................................CTTGTGCGTGTGACATCGGCT............................................................................	21	1	739.00	0.00	98.00	0.00	641.00
...........................................................................CTTGTGCGTGTGACAGCGTCT............................................................................	21	1	734.00	1.00	173.00	0.00	560.00
...........................................................................CTTGTGCGTGTGACAGCGGAT............................................................................	21	1	727.00	0.00	68.00	0.00	659.00
............................................................................TTGTGCGTGTGACAGAGGCTAT..........................................................................	22	1	661.00	0.00	76.00	0.00	585.00
............................................................................TTGTGCGTGTGACAGCTGCT............................................................................	20	1	654.00	1.00	35.00	0.00	618.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATAA........................................................................	25	1	644.00	0.00	61.00	0.00	583.00
...........................................................................CTTGTGCGTGTGACAGAGGCTAT..........................................................................	23	1	641.00	0.00	62.00	0.00	579.00
............................................................................TTGTGCGTGTGACAGCGGCA............................................................................	20	1	629.00	1.00	96.00	0.00	532.00
...........................................................................CTTGTGCGTGTGACAGCGGCTC...........................................................................	22	1	606.00	0.00	508.00	0.00	98.00
...........................................................................CTTGTGCGTGTGACAGCTGC.............................................................................	20	1	568.00	0.00	26.00	0.00	542.00
............................................................................TTGTGAGTGTGACAGCGGCTAT..........................................................................	22	1	564.00	0.00	20.00	0.00	544.00
...........................................................................CTTGTGAGTGTGACAGCGGCTAT..........................................................................	23	1	541.00	0.00	25.00	0.00	516.00
...........................................................................CTTGTTCGTGTGACAGCGGCTAT..........................................................................	23	1	526.00	0.00	16.00	0.00	510.00
...........................................................................CTTGTTCGTGTGACAGCGGCT............................................................................	21	1	510.00	0.00	24.00	0.00	486.00
............................................................................TTGTTCGTGTGACAGCGGCTAT..........................................................................	22	1	500.00	0.00	13.00	0.00	487.00
...........................................................................CTTGTGAGTGTGACAGCGGCT............................................................................	21	1	492.00	0.00	39.00	0.00	453.00
...........................................................................CTTGTGCGTGTGACAGAGGCT............................................................................	21	1	467.00	0.00	81.00	0.00	386.00
............................................................................TTGTGCGTGTGACAGCGTA.............................................................................	19	1	456.00	0.00	29.00	0.00	427.00
............................................................................TTGTGCGTGTGACAGCTGCTA...........................................................................	21	1	454.00	0.00	36.00	0.00	418.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAAA.........................................................................	24	1	449.00	0.00	53.00	0.00	396.00
............................................................................TTGTGCGTGTGACAGCGGCTC...........................................................................	21	1	439.00	0.00	365.00	0.00	74.00
.....................................AGCTGCTGGCCACTGCACAAGAT................................................................................................................	23	1	438.00	3.00	42.00	0.00	393.00
............................................................................TTGCGCGTGTGACAGCGGCTAT..........................................................................	22	1	434.00	0.00	122.00	0.00	312.00
...........................................................................ATTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	421.00	0.00	6.00	0.00	415.00
...........................................................................CTTGTGCGTGTGACAGCGGCTG...........................................................................	22	1	418.00	0.00	68.00	0.00	350.00
............................................................................TTGTGCGTGTGACAGCAGCTAT..........................................................................	22	1	407.00	0.00	120.00	0.00	287.00
............................................................................TTGTGCGTGTTACAGCGGCT............................................................................	20	1	398.00	0.00	18.00	0.00	380.00
...........................................................................CTTGTGCGTGTGACAGCTGCTA...........................................................................	22	1	397.00	0.00	25.00	0.00	372.00
............................................................................TTGTGCGTTTGACAGCGGCTAT..........................................................................	22	1	395.00	0.00	98.00	0.00	297.00
...........................................................................ATTGTGCGTGTGACAGCGGC.............................................................................	20	1	378.00	0.00	4.00	0.00	374.00
............................................................................TTGTGCTTGTGACAGCGGCTAT..........................................................................	22	1	370.00	0.00	23.00	0.00	347.00
............................................................................TTGTGCGTGTTACAGCGGCTA...........................................................................	21	1	370.00	0.00	23.00	0.00	347.00
............................................................................TTGTGCGTGTGACATCGGCT............................................................................	20	1	369.00	0.00	54.00	0.00	315.00
............................................................................TTGTGCGTGTGACAGCGGCTAAA.........................................................................	23	1	357.00	0.00	58.00	0.00	299.00
...........................................................................CTTGTGCGTGTGACAGCAGCTAT..........................................................................	23	1	357.00	0.00	81.00	0.00	276.00
...........................................................................CTTGTGCTTGTGACAGCGGCTAT..........................................................................	23	1	356.00	0.00	30.00	1.00	325.00
............................................................................TTGTGCGTGTGACAGTGGCTAT..........................................................................	22	1	349.00	0.00	24.00	0.00	325.00
............................................................................TTGTGCGTGTGACAGCGGCTATC.........................................................................	23	1	348.00	2.00	175.00	0.00	171.00
...........................................................................CTTGTGCGTGTTACAGCGGCTA...........................................................................	22	1	348.00	0.00	15.00	0.00	333.00
...........................................................................CTTGTGCGTGCGACAGCGGCTAT..........................................................................	23	1	347.00	1.00	51.00	0.00	295.00
............................................................................TTGTGCGTGCGACAGCGGCTAT..........................................................................	22	1	344.00	0.00	65.00	0.00	279.00
............................................................................TTGTGCGTGTGACAGCGTCT............................................................................	20	1	344.00	0.00	61.00	0.00	283.00
...........................................................................CTTGTGCGTGTGACAGCGGTT............................................................................	21	1	341.00	0.00	82.00	0.00	259.00
............................................................................TTGTGCGTGTGACAGCGGCTATAA........................................................................	24	1	338.00	0.00	44.00	0.00	294.00
...........................................................................CTTGTGCGTGTGAAAGCGGCTAT..........................................................................	23	1	333.00	0.00	32.00	0.00	301.00
............................................................................TTGTGCGTGTGACAGCGTCTA...........................................................................	21	1	333.00	0.00	55.00	0.00	278.00
............................................................................TTGTGCGCGTGACAGCGGCTAT..........................................................................	22	1	333.00	0.00	58.00	1.00	274.00
...........................................................................CTTGTGCGTGTGACAGCGGA.............................................................................	20	1	328.00	0.00	38.00	0.00	290.00

droAna3

GC------------G-----TTAACGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAAC----------------------------------------------CAATCA	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
...........................................................................CTTGTGCGTGTGACAGCGGCT............................................................................	21	1	106537.00	4180.00	61601.00	40754.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	83040.00	1551.00	62234.00	19250.00	5.00
............................................................................TTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	46759.00	1839.00	19989.00	24925.00	6.00
...........................................................................CTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	29868.00	572.00	21928.00	7367.00	1.00
............................................................................TTGTGCGTGTGACAGCGGCT............................................................................	20	1	20789.00	1692.00	6521.00	12573.00	3.00
............................................................................TTGTGCGTGTGACAGCGGCTA...........................................................................	21	1	19236.00	819.00	7720.00	10697.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGC.............................................................................	20	1	19235.00	698.00	12526.00	6009.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGGCTT...........................................................................	22	1	10093.00	415.00	5957.00	3720.00	1.00
............................................................................TTGTGCGTGTGACAGCGGC.............................................................................	19	1	5759.00	326.00	2076.00	3356.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGG..............................................................................	19	1	5295.00	259.00	2803.00	2233.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATT.........................................................................	24	1	4310.00	108.00	3403.00	799.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATT.........................................................................	23	1	3236.00	174.00	1559.00	1503.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTT...........................................................................	21	1	3025.00	214.00	922.00	1889.00	0.00
............................................................................TTGTGCGTGTGACAGCGG..............................................................................	18	1	2484.00	25.00	594.00	1865.00	0.00
............................................................................TTGTGCGTGTGACAGCGGT.............................................................................	19	1	2238.00	162.00	515.00	1561.00	0.00
............................................................................TTGTGCGTGTGACAGCGTT.............................................................................	19	1	2181.00	166.00	547.00	1468.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTT..........................................................................	23	1	2000.00	84.00	1145.00	771.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCA............................................................................	21	1	1460.00	67.00	1130.00	263.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGT.............................................................................	20	1	1448.00	68.00	699.00	681.00	0.00
...........................................................................CTTGTGCGTGTGACATCGGCT............................................................................	21	1	1443.00	54.00	1306.00	83.00	0.00
...........................................................................CTTGTGCGTGTGACATCGGCTAT..........................................................................	23	1	1434.00	16.00	1385.00	33.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAG..........................................................................	22	1	1398.00	32.00	748.00	618.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAA..........................................................................	23	1	1392.00	23.00	998.00	371.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAG..........................................................................	23	1	1266.00	9.00	1006.00	251.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTTT..........................................................................	22	1	1077.00	81.00	310.00	686.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATTT........................................................................	25	1	964.00	22.00	794.00	148.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAC..........................................................................	23	1	856.00	13.00	386.00	456.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCTC...........................................................................	22	1	854.00	4.00	72.00	777.00	1.00
............................................................................TTGTGCGTGTGACAGCGGCTAA..........................................................................	22	1	817.00	31.00	337.00	449.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATA.........................................................................	24	1	809.00	9.00	662.00	138.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGAT............................................................................	21	1	784.00	26.00	692.00	66.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATTT........................................................................	24	1	728.00	35.00	399.00	294.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGATAT..........................................................................	23	1	717.00	10.00	684.00	23.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATA.........................................................................	23	1	696.00	39.00	380.00	277.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATG.........................................................................	23	1	653.00	10.00	501.00	142.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGTCT............................................................................	21	1	651.00	22.00	526.00	103.00	0.00
...........................................................................CTTGTTCGTGTGACAGCGGCT............................................................................	21	1	639.00	21.00	594.00	24.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTG...........................................................................	22	1	622.00	15.00	409.00	198.00	0.00
...........................................................................CTTGTTCGTGTGACAGCGGCTAT..........................................................................	23	1	621.00	8.00	605.00	8.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGTT............................................................................	21	1	605.00	26.00	268.00	311.00	0.00
...........................................................................CTGGTGCGTGTGACAGCGGCT............................................................................	21	1	588.00	0.00	465.00	123.00	0.00
............................................................................TTGTGCGTGTGACAGCGGTT............................................................................	20	1	583.00	34.00	120.00	429.00	0.00
...........................................................................CTTGTGCGTGTGACAGCG...............................................................................	18	1	548.00	8.00	318.00	222.00	0.00
...........................................................................ATTGTGCGTGTGACAGCGGCT............................................................................	21	1	542.00	4.00	265.00	273.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATG.........................................................................	24	1	536.00	8.00	478.00	50.00	0.00
............................................................................TTGTGCGTGTGACATCGGCTAT..........................................................................	22	1	536.00	32.00	468.00	36.00	0.00
...........................................................................CTGGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	507.00	0.00	471.00	36.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAC..........................................................................	22	1	499.00	5.00	51.00	442.00	1.00
...........................................................................CTTGTGCGTGTGACATCGGCTA...........................................................................	22	1	457.00	6.00	435.00	16.00	0.00
............................................................................TTGTGCGTGTGACAGCGT..............................................................................	18	1	456.00	0.00	60.00	395.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTTT.........................................................................	24	1	418.00	21.00	264.00	133.00	0.00
...........................................................................CTTGTGCGTGTGACAGAGGCT............................................................................	21	1	406.00	15.00	248.00	143.00	0.00
...........................................................................ATTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	401.00	6.00	284.00	111.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGTCTAT..........................................................................	23	1	395.00	4.00	351.00	40.00	0.00
...........................................................................CTTGTGCGTGTGACAGCTGCT............................................................................	21	1	390.00	10.00	328.00	52.00	0.00
............................................................................TTGTGCGTGTGACAGCGTA.............................................................................	19	1	388.00	22.00	164.00	202.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTCT..........................................................................	23	1	355.00	1.00	32.00	322.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGTT.............................................................................	20	1	353.00	15.00	178.00	160.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTCT..........................................................................	22	1	350.00	12.00	63.00	275.00	0.00
...........................................................................CTTGGGCGTGTGACAGCGGCT............................................................................	21	1	341.00	3.00	2.00	336.00	0.00
............................................................................TTGTGCGTGTGACAGCGGATAT..........................................................................	22	1	339.00	9.00	274.00	56.00	0.00
...........................................................................CTTGTGCGTGTGACAGAGGCTAT..........................................................................	23	1	322.00	3.00	259.00	60.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTC...........................................................................	21	1	320.00	6.00	36.00	277.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCG............................................................................	21	1	310.00	30.00	135.00	145.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTG...........................................................................	21	1	309.00	17.00	143.00	149.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTTG..........................................................................	22	1	306.00	5.00	168.00	133.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGA.............................................................................	20	1	302.00	9.00	206.00	87.00	0.00
...........................................................................CTTGTGCGTGTGACAGCTGCTAT..........................................................................	23	1	297.00	1.00	273.00	23.00	0.00
............................................................................TTGGGCGTGTGACAGCGGCTAT..........................................................................	22	1	297.00	5.00	5.00	287.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATAA........................................................................	25	1	296.00	3.00	264.00	29.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGATA...........................................................................	22	1	296.00	2.00	280.00	14.00	0.00
...........................................................................CTTGTGCGTGTGACATCGGC.............................................................................	20	1	291.00	16.00	250.00	25.00	0.00
...........................................................................CTTGTGAGTGTGACAGCGGCT............................................................................	21	1	289.00	11.00	124.00	154.00	0.00
...........................................................................TTTGTGCGTGTGACAGCGGCT............................................................................	21	1	286.00	1.00	60.00	225.00	0.00
...........................................................................CTTGCGCGTGTGACAGCGGCT............................................................................	21	1	286.00	2.00	78.00	206.00	0.00
............................................................................TTGTGCGTGTGACAGCGGTTT...........................................................................	21	1	285.00	15.00	134.00	136.00	0.00
...........................................................................CTTGTGCGTGCGACAGCGGCT............................................................................	21	1	280.00	12.00	90.00	178.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCC............................................................................	21	1	280.00	24.00	157.00	99.00	0.00
.....................................AGCTGCTGGCCACTGCACAAGAT................................................................................................................	23	1	275.00	1.00	261.00	12.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGTTT...........................................................................	22	1	263.00	6.00	193.00	64.00	0.00
............................................................................TTGTTCGTGTGACAGCGGCTAT..........................................................................	22	1	262.00	9.00	240.00	13.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCAAT..........................................................................	23	1	254.00	13.00	240.00	1.00	0.00
...........................................................................CTTGTGCGCGTGACAGCGGCT............................................................................	21	1	249.00	5.00	126.00	118.00	0.00
.....................................AGCTGCTGGCCACTGCACAAGA.................................................................................................................	22	1	231.00	1.00	212.00	18.00	0.00
............................................................................TTGCGCGTGTGACAGCGGCTAT..........................................................................	22	1	226.00	5.00	29.00	192.00	0.00
............................................................................TTGTGCGTGTGACAGCGGA.............................................................................	19	1	225.00	22.00	70.00	133.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGCCT............................................................................	21	1	223.00	4.00	43.00	176.00	0.00
............................................................................TTGTGCGTGTGACAGCGTG.............................................................................	19	1	222.00	18.00	44.00	160.00	0.00
............................................................................TTGTGCGTGTGACATCGGCTA...........................................................................	21	1	221.00	11.00	188.00	22.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTG..........................................................................	23	1	218.00	8.00	124.00	86.00	0.00
...........................................................................CTTGTTCGTGTGACAGCGGCTA...........................................................................	22	1	216.00	2.00	210.00	4.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTGT..........................................................................	22	1	213.00	9.00	56.00	147.00	1.00
............................................................................TTGTGCGTGTGACAGAGGCTAT..........................................................................	22	1	209.00	17.00	102.00	90.00	0.00
............................................................................TTGTGCGTGTGACAGCG...............................................................................	17	1	206.00	0.00	0.00	206.00	0.00
...........................................................................CTTGTGCGTGCGACAGCGGCTAT..........................................................................	23	1	201.00	8.00	105.00	88.00	0.00
...........................................................................CTTGTGCGTGTGGCAGCGGCT............................................................................	21	1	198.00	8.00	110.00	80.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGT..............................................................................	19	1	197.00	11.00	93.00	93.00	0.00
...........................................................................CTTGTGCGCGTGACAGCGGCTAT..........................................................................	23	1	193.00	4.00	116.00	73.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCCAT..........................................................................	23	1	192.00	9.00	166.00	17.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCGAT..........................................................................	23	1	189.00	12.00	161.00	16.00	0.00
...........................................................................CTTGTGCGTGTGACACCGGCT............................................................................	21	1	188.00	10.00	50.00	128.00	0.00

dp4

ATATGTGATTTAGCT-----CGATCGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGATTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAAA--CTAAACAAACCAAAAAGGAAGTTGAACGCC-----TAATGCAATC-	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
...........................................................................CTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	54444.00	879.00	23.00	53540.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGGCT............................................................................	21	1	48122.00	855.00	8.00	47126.00	133.00
............................................................................TTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	42966.00	501.00	25.00	42440.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCT............................................................................	20	1	23117.00	516.00	8.00	22555.00	38.00
...........................................................................CTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	19049.00	288.00	6.00	18739.00	16.00
............................................................................TTGTGCGTGTGACAGCGGCTA...........................................................................	21	1	18347.00	306.00	7.00	18029.00	5.00
............................................................................TTGTGCGTGTGACAGCGGC.............................................................................	19	1	15793.00	418.00	0.00	15366.00	9.00
...........................................................................CTTGTGCGTGTGACAGCGGC.............................................................................	20	1	4535.00	116.00	5.00	4411.00	3.00
...........................................................................CTTGTGCGTGTGACAGCGGCTT...........................................................................	22	1	3268.00	62.00	1.00	3201.00	4.00
...........................................................................CTTGTGCGTGTGACAGCGG..............................................................................	19	1	2340.00	74.00	0.00	2266.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTT...........................................................................	21	1	2154.00	61.00	0.00	2093.00	0.00
............................................................................TTGTGCGTGTGACAGCGGT.............................................................................	19	1	2060.00	57.00	0.00	2003.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATT.........................................................................	24	1	1904.00	37.00	0.00	1867.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATT.........................................................................	23	1	1654.00	23.00	0.00	1631.00	0.00
............................................................................TTGTGCGTGTGACAGCGG..............................................................................	18	1	1554.00	5.00	0.00	1549.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAA..........................................................................	23	1	1083.00	16.00	0.00	1065.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAC..........................................................................	23	1	886.00	9.00	1.00	876.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAA..........................................................................	22	1	640.00	10.00	0.00	630.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTT..........................................................................	23	1	628.00	7.00	1.00	620.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATA.........................................................................	23	1	552.00	7.00	0.00	545.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATA.........................................................................	24	1	545.00	8.00	1.00	536.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGT.............................................................................	20	1	487.00	9.00	0.00	478.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTTT..........................................................................	22	1	486.00	5.00	0.00	481.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTCT..........................................................................	23	1	484.00	2.00	0.00	482.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCA............................................................................	21	1	370.00	8.00	0.00	362.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTC...........................................................................	22	1	308.00	2.00	0.00	306.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAC..........................................................................	22	1	307.00	3.00	0.00	304.00	0.00
............................................................................TTGTGCGTGTGACAGCGTT.............................................................................	19	1	267.00	6.00	0.00	261.00	0.00
............................................................................TTGTGCGTGTGACAGCGGA.............................................................................	19	1	249.00	6.00	0.00	243.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTCT..........................................................................	22	1	234.00	1.00	0.00	233.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATTT........................................................................	25	1	193.00	6.00	1.00	186.00	0.00
............................................................................TTGTGCGTGTGACAGCGGTT............................................................................	20	1	191.00	5.00	0.00	186.00	0.00
...........................................................................TTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	187.00	1.00	0.00	186.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATTT........................................................................	24	1	186.00	9.00	0.00	177.00	0.00
...........................................................................ATTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	183.00	1.00	0.00	182.00	0.00
...........................................................................ATTGTGCGTGTGACAGCGGCT............................................................................	21	1	177.00	0.00	0.00	177.00	0.00
...........................................................................CTAGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	176.00	0.00	0.00	176.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAG..........................................................................	22	1	169.00	1.00	0.00	168.00	0.00
............................................................................TTATGCGTGTGACAGCGGCTAT..........................................................................	22	1	160.00	1.00	0.00	159.00	0.00
...........................................................................CTAGTGCGTGTGACAGCGGCT............................................................................	21	1	158.00	0.00	0.00	158.00	0.00
...........................................................................CTTGTGCGTGTGACAGCG...............................................................................	18	1	154.00	1.00	0.00	153.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTC...........................................................................	21	1	153.00	0.00	1.00	152.00	0.00
............................................................................TTGTGCGTGTGACAGCGT..............................................................................	18	1	153.00	0.00	0.00	153.00	0.00
...........................................................................TTTGTGCGTGTGACAGCGGCT............................................................................	21	1	148.00	2.00	0.00	146.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACC.........................................................................	24	1	145.00	2.00	2.00	141.00	0.00
............................................................................TTGGGCGTGTGACAGCGGCTAT..........................................................................	22	1	143.00	0.00	0.00	143.00	0.00
...........................................................................CTCGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	139.00	1.00	0.00	138.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGTT............................................................................	21	1	137.00	1.00	0.00	136.00	0.00
............................................................................TTGCGCGTGTGACAGCGGCTAT..........................................................................	22	1	135.00	1.00	0.00	134.00	0.00
...........................................................................CTTGTGCGTGCGACAGCGGCTAT..........................................................................	23	1	135.00	1.00	0.00	134.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCA............................................................................	20	1	122.00	2.00	0.00	120.00	0.00
...........................................................................CTCGTGCGTGTGACAGCGGCT............................................................................	21	1	120.00	0.00	0.00	120.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGT..............................................................................	19	1	120.00	1.00	2.00	117.00	0.00
...........................................................................CTTGTGCGTGCGACAGCGGCT............................................................................	21	1	116.00	0.00	0.00	116.00	0.00
...........................................................................CTTGTGCGTGTGACAGAGGCT............................................................................	21	1	113.00	2.00	0.00	111.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAG..........................................................................	23	1	112.00	0.00	0.00	112.00	0.00
...........................................................................CTTGCGCGTGTGACAGCGGCTAT..........................................................................	23	1	106.00	0.00	0.00	106.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAAA.........................................................................	24	1	105.00	3.00	0.00	102.00	0.00
...........................................................................CTTGTGCGTGTGCCAGCGGCTAT..........................................................................	23	1	101.00	1.00	0.00	100.00	0.00
...........................................................................CTTGCGCGTGTGACAGCGGCT............................................................................	21	1	100.00	0.00	0.00	100.00	0.00
...........................................................................CTTGTGCGTGTGACAGAGGCTAT..........................................................................	23	1	98.00	0.00	0.00	98.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGA.............................................................................	20	1	97.00	2.00	0.00	95.00	0.00
...........................................................................CTTGTGCGCGTGACAGCGGCTAT..........................................................................	23	1	96.00	0.00	0.00	96.00	0.00
............................................................................TTGTGCGTGCGACAGCGGCTAT..........................................................................	22	1	96.00	1.00	0.00	95.00	0.00
...........................................................................CTGGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	94.00	0.00	0.00	94.00	0.00
...........................................................................CTTGTGCGTGTGCCAGCGGCT............................................................................	21	1	94.00	0.00	0.00	94.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATAA........................................................................	25	1	93.00	3.00	0.00	90.00	0.00
............................................................................TTGGGCGTGTGACAGCGGCT............................................................................	20	1	93.00	0.00	0.00	93.00	0.00
...........................................................................CTTGTGCGCGTGACAGCGGCT............................................................................	21	1	92.00	1.00	0.00	91.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGCCTAT..........................................................................	23	1	90.00	0.00	0.00	90.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGCCT............................................................................	21	1	88.00	1.00	0.00	87.00	0.00
...........................................................................CTTGTGCGTGTGACCGCGGCT............................................................................	21	1	87.00	1.00	0.00	86.00	0.00
............................................................................TTGTGCGTGTGACAGAGGCTAT..........................................................................	22	1	85.00	0.00	0.00	85.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTG...........................................................................	22	1	83.00	0.00	0.00	83.00	0.00
...........................................................................CTTGTGCGTGTGACAGCAGCT............................................................................	21	1	81.00	0.00	0.00	81.00	0.00
...........................................................................CTTGTGCGTGTGACCGCGGCTAT..........................................................................	23	1	81.00	0.00	0.00	81.00	0.00
...........................................................................CTGGTGCGTGTGACAGCGGCT............................................................................	21	1	80.00	0.00	0.00	80.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTGT..........................................................................	23	1	79.00	1.00	0.00	78.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTTT.........................................................................	24	1	79.00	1.00	0.00	78.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTGT..........................................................................	22	1	79.00	0.00	1.00	78.00	0.00
............................................................................TTGCGCGTGTGACAGCGGC.............................................................................	19	1	78.00	0.00	0.00	78.00	0.00
...........................................................................CTTGGGCGTGTGACAGCGGCT............................................................................	21	1	77.00	0.00	0.00	77.00	0.00
...........................................................................CTAGTGCGTGTGACAGCGGCTA...........................................................................	22	1	77.00	0.00	0.00	77.00	0.00
............................................................................TTGCGCGTGTGACAGCGGCT............................................................................	20	1	76.00	2.00	0.00	74.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCC............................................................................	21	1	76.00	2.00	0.00	69.00	5.00
............................................................................TTATGCGTGTGACAGCGGCT............................................................................	20	1	75.00	0.00	0.00	75.00	0.00
...........................................................................CTTGTGCGTGTGGCAGCGGCTAT..........................................................................	23	1	75.00	0.00	0.00	75.00	0.00
............................................................................TTCTGCGTGTGACAGCGGCTAT..........................................................................	22	1	75.00	0.00	0.00	75.00	0.00
...........................................................................TTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	74.00	0.00	0.00	74.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATC.........................................................................	24	1	73.00	2.00	0.00	71.00	0.00
...........................................................................CTTGAGCGTGTGACAGCGGCTAT..........................................................................	23	1	72.00	0.00	0.00	72.00	0.00
...........................................................................CTTGTGCGTGTGACGGCGGCT............................................................................	21	1	72.00	1.00	0.00	71.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATG.........................................................................	24	1	71.00	1.00	0.00	70.00	0.00
...........................................................................CTTGTGCGTGTGACAGCAGCTAT..........................................................................	23	1	70.00	1.00	0.00	69.00	0.00
...........................................................................CTTGTGCGTGTGGCAGCGGCT............................................................................	21	1	69.00	1.00	0.00	68.00	0.00
...........................................................................CTTGGGCGTGTGACAGCGGCTAT..........................................................................	23	1	68.00	0.00	0.00	68.00	0.00
...........................................................................CTTGTGCGTGTGTCAGCGGCT............................................................................	21	1	64.00	0.00	0.00	64.00	0.00
............................................................................TTATGCGTGTGACAGCGGCTA...........................................................................	21	1	64.00	0.00	0.00	64.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGTCTAT..........................................................................	23	1	63.00	1.00	0.00	62.00	0.00
............................................................................TTGTGCGTGTGGCAGCGGCTAT..........................................................................	22	1	63.00	2.00	0.00	61.00	0.00
............................................................................TTGTGCGTGTGACAGCGGTTT...........................................................................	21	1	63.00	5.00	0.00	58.00	0.00

droPer1

ATATGTGATTTAGCT-----CGATCGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGATTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAAA--CTAAACAAACAAAAAAGGAAGTTGAACGCC-----TAATGCAATC-	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
...........................................................................CTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	205948.00	1097.00	7.00	62039.00	142799.00	6.00
...........................................................................CTTGTGCGTGTGACAGCGGCT............................................................................	21	1	165786.00	1668.00	4.00	44319.00	119493.00	302.00
............................................................................TTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	135337.00	621.00	7.00	48492.00	86217.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	75432.00	529.00	3.00	21432.00	53447.00	21.00
............................................................................TTGTGCGTGTGACAGCGGCT............................................................................	20	1	49038.00	582.00	1.00	16686.00	31726.00	43.00
............................................................................TTGTGCGTGTGACAGCGGCTA...........................................................................	21	1	42278.00	253.00	3.00	13929.00	28070.00	23.00
............................................................................TTGTGCGTGTGACAGCGGC.............................................................................	19	1	12981.00	154.00	0.00	4071.00	8754.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGGC.............................................................................	20	1	11721.00	151.00	1.00	3138.00	8426.00	5.00
...........................................................................CTTGTGCGTGTGACAGCGGCTT...........................................................................	22	1	6339.00	61.00	0.00	1477.00	4786.00	15.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAA..........................................................................	23	1	5217.00	32.00	0.00	1285.00	3898.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAC..........................................................................	23	1	5183.00	16.00	0.00	1003.00	4164.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATT.........................................................................	24	1	4126.00	27.00	0.00	1236.00	2862.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGG..............................................................................	19	1	3656.00	69.00	0.00	1332.00	2255.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTCT..........................................................................	23	1	2955.00	0.00	0.00	538.00	2417.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTC...........................................................................	22	1	2947.00	0.00	0.00	254.00	2690.00	3.00
............................................................................TTGTGCGTGTGACAGCGGCTATT.........................................................................	23	1	2896.00	13.00	1.00	903.00	1979.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTT...........................................................................	21	1	2594.00	24.00	0.00	676.00	1894.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAA..........................................................................	22	1	2306.00	15.00	0.00	709.00	1582.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAC..........................................................................	22	1	1987.00	6.00	1.00	424.00	1556.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATA.........................................................................	24	1	1705.00	5.00	0.00	554.00	1144.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTT..........................................................................	23	1	1515.00	12.00	1.00	194.00	1307.00	1.00
............................................................................TTGTGCGTGTGACAGCGGCTATA.........................................................................	23	1	1396.00	4.00	0.00	509.00	883.00	0.00
............................................................................TTGGGCGTGTGACAGCGGCTAT..........................................................................	22	1	1382.00	0.00	0.00	113.00	1269.00	0.00
............................................................................TTGTGCGTGTGACAGCGG..............................................................................	18	1	1370.00	3.00	0.00	542.00	825.00	0.00
...........................................................................TTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	1188.00	0.00	0.00	177.00	1011.00	0.00
...........................................................................CTTGGGCGTGTGACAGCGGCTAT..........................................................................	23	1	1003.00	1.00	0.00	42.00	960.00	0.00
...........................................................................TTTGTGCGTGTGACAGCGGCT............................................................................	21	1	970.00	2.00	0.00	114.00	852.00	2.00
...........................................................................ATTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	956.00	2.00	0.00	317.00	637.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTCT..........................................................................	22	1	927.00	0.00	0.00	218.00	709.00	0.00
...........................................................................CTTGGGCGTGTGACAGCGGCT............................................................................	21	1	908.00	0.00	0.00	36.00	872.00	0.00
............................................................................TTGTGCGTGTGACAGCGGT.............................................................................	19	1	893.00	8.00	0.00	282.00	603.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTTT..........................................................................	22	1	882.00	3.00	0.00	137.00	742.00	0.00
...........................................................................ATTGTGCGTGTGACAGCGGCT............................................................................	21	1	829.00	2.00	0.00	236.00	585.00	6.00
............................................................................TTGTGCGTGTGACAGCGGCTC...........................................................................	21	1	758.00	1.00	0.00	86.00	671.00	0.00
...........................................................................CTTGTGCGTGCGACAGCGGCTAT..........................................................................	23	1	741.00	3.00	0.00	125.00	613.00	0.00
............................................................................TTGCGCGTGTGACAGCGGCTAT..........................................................................	22	1	732.00	2.00	0.00	104.00	626.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAG..........................................................................	23	1	714.00	4.00	0.00	143.00	567.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCA............................................................................	21	1	665.00	6.00	0.00	167.00	492.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATC.........................................................................	24	1	647.00	0.00	0.00	63.00	584.00	0.00
...........................................................................CTTGTGCGTGTGACAGAGGCTAT..........................................................................	23	1	630.00	1.00	0.00	103.00	526.00	0.00
...........................................................................CTTGTGCGTGTGACAGAGGCT............................................................................	21	1	608.00	1.00	0.00	103.00	504.00	0.00
...........................................................................CTTGCGCGTGTGACAGCGGCTAT..........................................................................	23	1	596.00	0.00	0.00	95.00	501.00	0.00
...........................................................................CTTGCGCGTGTGACAGCGGCT............................................................................	21	1	584.00	0.00	0.00	66.00	518.00	0.00
...........................................................................CTTGTGCGTGCGACAGCGGCT............................................................................	21	1	575.00	1.00	0.00	97.00	477.00	0.00
...........................................................................CTTGAGCGTGTGACAGCGGCT............................................................................	21	1	573.00	0.00	0.00	56.00	517.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAG..........................................................................	22	1	562.00	2.00	0.00	108.00	452.00	0.00
............................................................................TTGGGCGTGTGACAGCGGCT............................................................................	20	1	551.00	2.00	0.00	32.00	517.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGCCT............................................................................	21	1	549.00	1.00	0.00	83.00	465.00	0.00
...........................................................................CTTGAGCGTGTGACAGCGGCTAT..........................................................................	23	1	537.00	0.00	0.00	48.00	489.00	0.00
...........................................................................CTTGTGCGTGTGTCAGCGGCT............................................................................	21	1	526.00	0.00	0.00	43.00	483.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTGT..........................................................................	22	1	508.00	0.00	0.00	74.00	434.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTGT..........................................................................	23	1	506.00	0.00	0.00	71.00	435.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATC.........................................................................	23	1	490.00	0.00	0.00	59.00	431.00	0.00
...........................................................................CTGGTGCGTGTGACAGCGGCT............................................................................	21	1	465.00	0.00	0.00	23.00	442.00	0.00
...........................................................................CTTGTGCGTGGGACAGCGGCTAT..........................................................................	23	1	463.00	1.00	0.00	33.00	429.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGCCTAT..........................................................................	23	1	462.00	0.00	0.00	93.00	369.00	0.00
...........................................................................CTTGTGCGTGGGACAGCGGCT............................................................................	21	1	458.00	1.00	0.00	25.00	432.00	0.00
...........................................................................TTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	445.00	0.00	0.00	46.00	399.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATTT........................................................................	25	1	437.00	8.00	0.00	113.00	316.00	0.00
...........................................................................CGTGTGCGTGTGACAGCGGCT............................................................................	21	1	428.00	0.00	0.00	33.00	395.00	0.00
............................................................................TTGTGCGTGTGACAGAGGCTAT..........................................................................	22	1	427.00	0.00	0.00	111.00	316.00	0.00
............................................................................TTGTGCGTGCGACAGCGGCTAT..........................................................................	22	1	426.00	1.00	0.00	107.00	318.00	0.00
...........................................................................CTTGTGCGCGTGACAGCGGCTAT..........................................................................	23	1	424.00	2.00	1.00	80.00	341.00	0.00
...........................................................................CTTGTGCGCGTGACAGCGGCT............................................................................	21	1	420.00	4.00	0.00	69.00	347.00	0.00
...........................................................................CTTGTGCGTGTGCCAGCGGCTAT..........................................................................	23	1	408.00	0.00	0.00	77.00	331.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTG...........................................................................	22	1	403.00	0.00	0.00	54.00	349.00	0.00
...........................................................................CTTGTGAGTGTGACAGCGGCTAT..........................................................................	23	1	402.00	0.00	0.00	48.00	354.00	0.00
...........................................................................CTTGTGAGTGTGACAGCGGCT............................................................................	21	1	396.00	1.00	0.00	37.00	358.00	0.00
...........................................................................CTTGTGCGTGTGTCAGCGGCTAT..........................................................................	23	1	383.00	0.00	0.00	41.00	342.00	0.00
...........................................................................CTTGTACGTGTGACAGCGGCTAT..........................................................................	23	1	380.00	1.00	0.00	295.00	84.00	0.00
...........................................................................CTTGTGCGTGTGCCAGCGGCT............................................................................	21	1	372.00	0.00	0.00	60.00	312.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGT.............................................................................	20	1	370.00	7.00	0.00	80.00	283.00	0.00
............................................................................TTGTGAGTGTGACAGCGGCTAT..........................................................................	22	1	366.00	1.00	0.00	263.00	102.00	0.00
...........................................................................CGTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	365.00	0.00	0.00	24.00	341.00	0.00
...........................................................................CTTGTGCGTGTGACCGCGGCT............................................................................	21	1	365.00	0.00	0.00	57.00	308.00	0.00
...........................................................................CTTGTGCGTGTGACACCGGCT............................................................................	21	1	362.00	0.00	0.00	38.00	324.00	0.00
............................................................................TTGGGCGTGTGACAGCGGCTA...........................................................................	21	1	362.00	0.00	0.00	26.00	336.00	0.00
...........................................................................CTTGTGCGTGTGACCGCGGCTAT..........................................................................	23	1	354.00	0.00	0.00	69.00	285.00	0.00
...........................................................................ATTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	353.00	0.00	0.00	139.00	212.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGGCC............................................................................	21	1	345.00	2.00	0.00	54.00	251.00	38.00
...........................................................................CTTGTGCGTGTGAAAGCGGCTAT..........................................................................	23	1	342.00	0.00	0.00	60.00	282.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGTCTAT..........................................................................	23	1	339.00	2.00	0.00	75.00	262.00	0.00
...........................................................................CTGGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	336.00	0.00	0.00	17.00	319.00	0.00
...........................................................................CTTGTGCGGGTGACAGCGGCTAT..........................................................................	23	1	334.00	0.00	0.00	20.00	314.00	0.00
...........................................................................CTTGTGCGGGTGACAGCGGCT............................................................................	21	1	331.00	0.00	0.00	18.00	312.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAAA.........................................................................	24	1	330.00	3.00	0.00	80.00	247.00	0.00
...........................................................................CTTGGGCGTGTGACAGCGGCTA...........................................................................	22	1	328.00	0.00	0.00	13.00	315.00	0.00
...........................................................................CTTGTGCGTGTGGCAGCGGCTAT..........................................................................	23	1	328.00	3.00	0.00	95.00	230.00	0.00
...........................................................................CTTGTGCGTGTGAAAGCGGCT............................................................................	21	1	326.00	0.00	0.00	56.00	270.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGTT............................................................................	21	1	320.00	1.00	0.00	47.00	272.00	0.00
...........................................................................CTTGTGCGTGTGACACCGGCTAT..........................................................................	23	1	319.00	0.00	0.00	39.00	280.00	0.00
............................................................................TTGCGCGTGTGACAGCGGCT............................................................................	20	1	313.00	0.00	0.00	57.00	256.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGTCT............................................................................	21	1	309.00	3.00	0.00	61.00	245.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACC.........................................................................	24	1	305.00	7.00	0.00	62.00	236.00	0.00
............................................................................TTGTGCGTGGGACAGCGGCTAT..........................................................................	22	1	301.00	1.00	0.00	26.00	274.00	0.00
...........................................................................CCTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	301.00	0.00	0.00	69.00	232.00	0.00
...........................................................................CTTGTGCGTGTGACAGCG...............................................................................	18	1	290.00	0.00	0.00	73.00	217.00	0.00
...........................................................................CTTGTACGTGTGACAGCGGCT............................................................................	21	1	288.00	0.00	0.00	213.00	75.00	0.00
...........................................................................CTTGTGCGTGTGACGGCGGCT............................................................................	21	1	287.00	3.00	0.00	53.00	231.00	0.00
...........................................................................CTTGTGCGTGTGACGGCGGCTAT..........................................................................	23	1	279.00	1.00	0.00	54.00	224.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGTTAT..........................................................................	23	1	274.00	2.00	0.00	44.00	228.00	0.00

droWil1

TCGCA----------AAAGCATAACGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCAGAAAACGACCA------------------------------------G--------------	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
...........................................................................CTTGTGCGTGTGACAGCGGCT............................................................................	21	1	280240.00	960.00	231.00	51271.00	227778.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	132927.00	1100.00	328.00	124433.00	7066.00
............................................................................TTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	91810.00	1025.00	331.00	88771.00	1683.00
...........................................................................CTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	66516.00	433.00	143.00	19208.00	46732.00
............................................................................TTGTGCGTGTGACAGCGGCT............................................................................	20	1	52235.00	695.00	72.00	17221.00	34247.00
............................................................................TTGTGCGTGTGACAGCGGCTA...........................................................................	21	1	28651.00	358.00	80.00	12600.00	15613.00
...........................................................................CTTGTGCGTGTGACAGCGGCC............................................................................	21	1	27664.00	1.00	0.00	58.00	27605.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATT.........................................................................	24	1	10117.00	63.00	11.00	7273.00	2770.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAC..........................................................................	23	1	8835.00	82.00	32.00	7836.00	885.00
...........................................................................CTTGTGCGTGTGACAGCGGCTT...........................................................................	22	1	7925.00	53.00	17.00	1130.00	6725.00
...........................................................................CTTGTGCGTGTGACAGCGGC.............................................................................	20	1	7835.00	78.00	39.00	3554.00	4164.00
...........................................................................CTTGTGCGTGTGACAGCGGCG............................................................................	21	1	5986.00	0.00	1.00	13.00	5972.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACC.........................................................................	24	1	4141.00	35.00	9.00	2748.00	1349.00
............................................................................TTGTGCGTGTGACAGCGGCC............................................................................	20	1	4096.00	2.00	0.00	20.00	4074.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAA..........................................................................	23	1	2629.00	10.00	1.00	1121.00	1497.00
............................................................................TTGTGCGTGTGACAGCGGCTATT.........................................................................	23	1	2338.00	26.00	8.00	2202.00	102.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATA.........................................................................	24	1	1998.00	18.00	3.00	1228.00	749.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATG.........................................................................	24	1	1750.00	5.00	1.00	825.00	919.00
............................................................................TTGTGCGTGTGACAGCGGC.............................................................................	19	1	1367.00	27.00	5.00	727.00	608.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATTT........................................................................	25	1	1312.00	13.00	1.00	1291.00	7.00
............................................................................TTGTGCGTGTGACAGCGGCTAC..........................................................................	22	1	1230.00	20.00	5.00	1103.00	102.00
............................................................................TTGTGCGTGTGACAGCGGCTATG.........................................................................	23	1	1198.00	1.00	0.00	663.00	534.00
...........................................................................CTTGTGCTTGTGACAGCGGCT............................................................................	21	1	1118.00	0.00	0.00	51.00	1067.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAAC.........................................................................	24	1	1067.00	0.00	0.00	256.00	811.00
............................................................................TTGTGCGTGTGACAGCGGCTT...........................................................................	21	1	1054.00	27.00	14.00	351.00	662.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACT.........................................................................	24	1	1027.00	8.00	3.00	663.00	353.00
............................................................................TTGTGCGTGTGACAGCGGCTATA.........................................................................	23	1	997.00	4.00	5.00	852.00	136.00
...........................................................................CTTGTGCGTGTGACAGCGG..............................................................................	19	1	963.00	29.00	13.00	902.00	19.00
...........................................................................CTTGTGCGTGTGGCAGCGGCT............................................................................	21	1	891.00	1.00	0.00	60.00	830.00
............................................................................TTGTGCGTGTGACAGCGGCG............................................................................	20	1	886.00	0.00	0.00	4.00	882.00
............................................................................TTGTGCGTGTGACAGTGGCTAT..........................................................................	22	1	855.00	0.00	1.00	854.00	0.00
...........................................................................CTTGTGCGTTTGACAGCGGCT............................................................................	21	1	810.00	0.00	0.00	28.00	782.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACA.........................................................................	24	1	730.00	12.00	3.00	588.00	127.00
...........................................................................CTTGTGCGTGTGACAGTGGCTAT..........................................................................	23	1	727.00	1.00	0.00	721.00	5.00
.....................................AGCTGCTGGCCACTGCACAAGAT................................................................................................................	23	1	698.00	0.00	13.00	566.00	119.00
.....................................AGCTGCTGGCCACTGCACAAGA.................................................................................................................	22	1	635.00	1.00	13.00	474.00	147.00
.............................................................................CTTGCGTGTGACAGCGGCT............................................................................	19	1	628.00	0.00	0.00	63.00	565.00
...........................................................................CTTGTGCGTGTGACATCGGCT............................................................................	21	1	620.00	2.00	0.00	65.00	553.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAG..........................................................................	23	1	607.00	3.00	2.00	481.00	121.00
............................................................................TTGTGCGTGTGACAGCGGCTAA..........................................................................	22	1	605.00	7.00	2.00	433.00	163.00
...........................................................................CTTGTTCGTGTGACAGCGGCT............................................................................	21	1	580.00	2.00	0.00	83.00	495.00
...........................................................................CTTGTGCGTGTGACAGCGGATAT..........................................................................	23	1	573.00	0.00	0.00	573.00	0.00
...........................................................................CTTGTGCxTGTGACAGCGGCT............................................................................	20	1	547.00	0.00	0.00	10.00	537.00
...........................................................................CTTGTGCGTGTGACAGAGGCTAT..........................................................................	23	1	518.00	0.00	0.00	517.00	1.00
...........................................................................CTTTTGCGTGTGACAGCGGCT............................................................................	21	1	512.00	0.00	0.00	25.00	487.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTT..........................................................................	23	1	498.00	12.00	2.00	360.00	124.00
...........................................................................CTTGTGCGTGTGAAAGCGGCTAT..........................................................................	23	1	493.00	0.00	0.00	492.00	1.00
...........................................................................CTTGTGCGCGTGACAGCGGCT............................................................................	21	1	486.00	0.00	1.00	128.00	357.00
............................................................................TTGTGCGTGTGACAGCGGCTAG..........................................................................	22	1	443.00	2.00	1.00	435.00	5.00
...........................................................................CTTGTGCGTGTGACAGCTGCTAT..........................................................................	23	1	423.00	2.00	0.00	411.00	10.00
............................................................................TTGTGTGTGTGACAGCGGCTAT..........................................................................	22	1	418.00	1.00	0.00	414.00	3.00
............................................................................TTGTGCGTGTGACAGCGGATAT..........................................................................	22	1	418.00	1.00	0.00	417.00	0.00
.............................................................................CTTGCGTGTGACAGCGGCTA...........................................................................	20	1	405.00	1.00	1.00	41.00	362.00
...........................................................................CTTGTGCCTGTGACAGCGGCT............................................................................	21	1	400.00	0.00	0.00	46.00	354.00
...........................................................................CTTGTGCGTGTGACAGCGGTTAT..........................................................................	23	1	399.00	0.00	0.00	395.00	4.00
...........................................................................CTTGTGCGTGTGACAGCAGCTAT..........................................................................	23	1	380.00	1.00	0.00	374.00	5.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAAT.........................................................................	24	1	380.00	1.00	0.00	180.00	199.00
............................................................................CTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	376.00	2.00	0.00	373.00	1.00
............................................................................TTGTGCTTGTGACAGCGGCT............................................................................	20	1	375.00	1.00	0.00	17.00	357.00
............................................................................TTGTGCGTGTGACAGAGGCTAT..........................................................................	22	1	374.00	0.00	0.00	374.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTG...........................................................................	22	1	366.00	6.00	0.00	68.00	292.00
............................................................................TTGTGCGTGTGACAGCTGCTAT..........................................................................	22	1	358.00	0.00	0.00	356.00	2.00
...........................................................................CTTGTGCGTGCGACAGCGGCTAT..........................................................................	23	1	353.00	4.00	0.00	341.00	8.00
...........................................................................CTTGTGTGTGTGACAGCGGCTAT..........................................................................	23	1	352.00	1.00	0.00	340.00	11.00
............................................................................TTGTGCGTGTGACAGxGGCTAT..........................................................................	21	1	351.00	2.00	0.00	349.00	0.00
...........................................................................CTTGTGCGTGCGACAGCGGCT............................................................................	21	1	349.00	1.00	0.00	105.00	243.00
............................................................................TTGTGCGTGTGACAGCAGCTAT..........................................................................	22	1	349.00	1.00	0.00	347.00	1.00
...........................................................................CTTGTGCGCGTGACAGCGGCTAT..........................................................................	23	1	339.00	2.00	1.00	321.00	15.00
...........................................................................CTTGTGTGTGTGACAGCGGCT............................................................................	21	1	335.00	0.00	0.00	111.00	224.00
............................................................................TTGTGAGTGTGACAGCGGCTAT..........................................................................	22	1	333.00	0.00	0.00	333.00	0.00
............................................................................TTGTGCGTGTGAAAGCGGCTAT..........................................................................	22	1	332.00	0.00	0.00	326.00	6.00
...........................................................................CTTGTGCxxGTGACAGCGGCT............................................................................	19	1	329.00	0.00	0.00	21.00	308.00
...........................................................................CTTGTGCATGTGACAGCGGCTAT..........................................................................	23	1	326.00	0.00	0.00	323.00	3.00
...........................................................................CTTGTGCTTGTGACAGCGGCTAT..........................................................................	23	1	321.00	1.00	1.00	164.00	155.00
...........................................................................CTTGTGCGTGTGACAGxGGCTAT..........................................................................	22	1	313.00	0.00	0.00	312.00	1.00
...........................................................................ATTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	312.00	0.00	0.00	310.00	2.00
............................................................................TTGTGCGTGTGACAGCGGTTAT..........................................................................	22	1	311.00	1.00	0.00	309.00	1.00
.............................................................................CTTGCGTGTGACAGCGGCTAT..........................................................................	21	1	303.00	1.00	0.00	216.00	86.00
...........................................................................CTTGTGCGTGTAACAGCGGCTAT..........................................................................	23	1	300.00	1.00	1.00	295.00	3.00
...........................................................................TTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	298.00	1.00	1.00	295.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGACTAT..........................................................................	23	1	295.00	0.00	0.00	293.00	2.00
.....................................AGCTGCTGGCCACTGCACAAGACC...............................................................................................................	24	1	295.00	0.00	0.00	138.00	157.00
...........................................................................CTTGTGCGTGTGACAGCxGCTAT..........................................................................	22	1	284.00	2.00	1.00	280.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGAC............................................................................	21	1	270.00	0.00	0.00	0.00	270.00
...........................................................................CTTGTGCATGTGACAGCGGCT............................................................................	21	1	257.00	1.00	0.00	140.00	116.00
............................................................................TTGTGCGCGTGACAGCGGCTAT..........................................................................	22	1	256.00	5.00	2.00	243.00	6.00
...........................................................................CCTGTGCGTGTGACAGCGGCT............................................................................	21	1	255.00	2.00	0.00	89.00	164.00
...........................................................................CTTGTGCGTGTGACAGCAGCT............................................................................	21	1	247.00	1.00	0.00	147.00	99.00
...........................................................................CTTGTGCGTGTGACAGCGGAT............................................................................	21	1	245.00	0.00	1.00	226.00	18.00
...........................................................................CTTGTGCGTGTGACAACGGCTAT..........................................................................	23	1	244.00	0.00	1.00	241.00	2.00
...........................................................................CTTGTACGTGTGACAGCGGCTAT..........................................................................	23	1	240.00	0.00	1.00	238.00	1.00
...........................................................................CTTGTGCGTCTGACAGCGGCT............................................................................	21	1	239.00	0.00	0.00	34.00	205.00
...........................................................................CTTGTCCGTGTGACAGCGGCT............................................................................	21	1	237.00	1.00	0.00	58.00	178.00
............................................................................TTGTGCGTGCGACAGCGGCTAT..........................................................................	22	1	236.00	2.00	1.00	233.00	0.00
...........................................................................CTTGTGCGTGTGACAGAGGCT............................................................................	21	1	229.00	1.00	0.00	210.00	18.00
............................................................................TTGTGCGTGTGACAGCxGCTAT..........................................................................	21	1	228.00	0.00	1.00	226.00	1.00
...........................................................................CTTGTGCGTATGACAGCGGCTAT..........................................................................	23	1	228.00	1.00	0.00	222.00	5.00
...........................................................................CTTGGGCGTGTGACAGCGGCT............................................................................	21	1	227.00	0.00	0.00	5.00	222.00
...........................................................................CTTGTGCGTGTGGCAGCGGCTA...........................................................................	22	1	225.00	1.00	0.00	23.00	201.00
............................................................................TTGTGCGTGTGACAGGGGCTAT..........................................................................	22	1	222.00	0.00	0.00	221.00	1.00
...........................................................................CTTGTACGTGTGACAGCGGCT............................................................................	21	1	221.00	1.00	0.00	122.00	98.00

droVir3

C--------------------GAGCGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTCA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGACCAGAGAAACAGCGAATAT----------------------------TTAACTATTTTTCC----	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
...........................................................................CTTGTGCGTGTGACAGCGGCT............................................................................	21	1	282678.00	197.00	126375.00	9.00	2732.00	153365.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	74295.00	96.00	72948.00	12.00	11.00	1228.00
............................................................................TTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	62420.00	108.00	61933.00	7.00	9.00	363.00
...........................................................................CTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	48550.00	47.00	33410.00	5.00	247.00	14841.00
............................................................................TTGTGCGTGTGACAGCGGCT............................................................................	20	1	42272.00	257.00	26865.00	2.00	430.00	14718.00
............................................................................TTGTGCGTGTGACAGCGGCTA...........................................................................	21	1	29673.00	48.00	23236.00	6.00	111.00	6272.00
...........................................................................CTTGTGCGTGTGACAGCGGCC............................................................................	21	1	25950.00	2.00	258.00	0.00	358.00	25332.00
...........................................................................CTTGTGCGTGTGACAGCGGCTT...........................................................................	22	1	17154.00	16.00	9466.00	0.00	151.00	7521.00
...........................................................................CTTGTGCGTGTGACAGCGGC.............................................................................	20	1	12949.00	23.00	9277.00	1.00	68.00	3580.00
............................................................................TTGTGCGTGTGACAGCGGC.............................................................................	19	1	10084.00	13.00	8352.00	0.00	13.00	1706.00
...........................................................................CTTGTGCGTGTGACAGCGGCG............................................................................	21	1	7501.00	0.00	187.00	0.00	169.00	7145.00
............................................................................TTGTGCGTGTGACAGCGG..............................................................................	18	1	6635.00	6.00	6547.00	0.00	0.00	82.00
............................................................................TTGTGCGTGTGACAGCGGT.............................................................................	19	1	3842.00	6.00	3811.00	0.00	0.00	25.00
............................................................................TTGTGCGTGTGACAGCGGCTT...........................................................................	21	1	3515.00	11.00	2629.00	0.00	22.00	853.00
...........................................................................CTTGTGCGTGTGACAGCGG..............................................................................	19	1	3318.00	8.00	3260.00	0.00	1.00	49.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAC..........................................................................	23	1	2895.00	5.00	2796.00	2.00	2.00	90.00
............................................................................TTGTGCGTGTGACAGCGGCC............................................................................	20	1	2559.00	0.00	99.00	0.00	63.00	2397.00
...........................................................................CTTGTGCGTGTGACAGCGGCTC...........................................................................	22	1	2310.00	0.00	2092.00	0.00	5.00	213.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATT.........................................................................	24	1	2248.00	4.00	1928.00	0.00	4.00	312.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAA..........................................................................	23	1	2007.00	4.00	1680.00	0.00	16.00	307.00
............................................................................TTGTGCGTGTGACAGCGTT.............................................................................	19	1	1858.00	1.00	1787.00	0.00	1.00	69.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTT..........................................................................	23	1	1649.00	2.00	1495.00	0.00	1.00	151.00
............................................................................TTGTGCGTGTGACAGCGGCTATT.........................................................................	23	1	1383.00	5.00	1348.00	1.00	0.00	29.00
...........................................................................CTTGTGCGTGTGACAGCGGCA............................................................................	21	1	1212.00	4.00	1054.00	0.00	3.00	151.00
...........................................................................CTTGTGCGTGTGACAGCGGCTCT..........................................................................	23	1	1043.00	0.00	1033.00	1.00	0.00	9.00
...........................................................................CTTGTGCGTGTGACAGCGGT.............................................................................	20	1	961.00	2.00	956.00	0.00	0.00	3.00
............................................................................TTGTGCGTGTGACAGCGGCTTT..........................................................................	22	1	914.00	2.00	904.00	0.00	0.00	8.00
............................................................................TTGTGCGTGTGACAGCGGCTAA..........................................................................	22	1	913.00	2.00	860.00	0.00	0.00	51.00
............................................................................TTGTGCGTGTGACAGCGGCTAC..........................................................................	22	1	900.00	0.00	885.00	1.00	0.00	14.00
...........................................................................CTTGTGAGTGTGACAGCGGCT............................................................................	21	1	848.00	0.00	796.00	0.00	1.00	51.00
............................................................................TTGTGCGTGTGACAGCGGCG............................................................................	20	1	779.00	0.00	48.00	0.00	27.00	704.00
............................................................................TTGTGCGTGTGACAGCGGCTCT..........................................................................	22	1	702.00	0.00	700.00	0.00	2.00	0.00
...........................................................................TTTGTGCGTGTGACAGCGGCT............................................................................	21	1	697.00	0.00	675.00	0.00	3.00	19.00
............................................................................TTGTGCGTGTGACAGCGGCTC...........................................................................	21	1	693.00	1.00	655.00	0.00	2.00	35.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATA.........................................................................	24	1	691.00	3.00	562.00	0.00	2.00	124.00
...........................................................................CTTGTGCGCGTGACAGCGGCT............................................................................	21	1	658.00	0.00	359.00	0.00	6.00	293.00
............................................................................TTGTGCGTGTGACAGCGGCTATA.........................................................................	23	1	656.00	5.00	620.00	0.00	0.00	31.00
...........................................................................CTTGTGCGTGTGACAGCGGCTG...........................................................................	22	1	623.00	0.00	378.00	0.00	0.00	245.00
............................................................................TTGGGCGTGTGACAGCGGCTAT..........................................................................	22	1	602.00	0.00	602.00	0.00	0.00	0.00
...........................................................................CGTGTGCGTGTGACAGCGGCT............................................................................	21	1	562.00	0.00	553.00	0.00	0.00	9.00
...........................................................................CTTGTGCGTGTGACAGCGGTT............................................................................	21	1	516.00	0.00	487.00	0.00	1.00	28.00
...........................................................................CTTGTGCGTGCGACAGCGGCT............................................................................	21	1	509.00	0.00	324.00	0.00	6.00	179.00
............................................................................TTGTGCGTGTGACAGCGGCTAG..........................................................................	22	1	482.00	0.00	481.00	0.00	0.00	1.00
...........................................................................CTTGTGCTTGTGACAGCGGCT............................................................................	21	1	472.00	0.00	70.00	0.00	11.00	391.00
............................................................................TTGTGCGTGTGACAGCGGTT............................................................................	20	1	471.00	1.00	464.00	0.00	0.00	6.00
............................................................................TTGTGCGTGTGACAGCGGA.............................................................................	19	1	464.00	1.00	452.00	0.00	0.00	11.00
............................................................................TTGTGCGTGTGACAGCGGCTG...........................................................................	21	1	442.00	0.00	319.00	0.00	4.00	119.00
...........................................................................CTTGCGCGTGTGACAGCGGCT............................................................................	21	1	425.00	0.00	350.00	0.00	3.00	72.00
............................................................................TTGTGCGTGTGACAGCGT..............................................................................	18	1	422.00	0.00	389.00	0.00	0.00	33.00
...........................................................................CTTGTGCGTGTGGCAGCGGCT............................................................................	21	1	394.00	1.00	190.00	0.00	2.00	201.00
...........................................................................CTTGGGCGTGTGACAGCGGCT............................................................................	21	1	389.00	0.00	304.00	0.00	2.00	83.00
...........................................................................TTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	387.00	0.00	387.00	0.00	0.00	0.00
...........................................................................CTTGTGAGTGTGACAGCGGCTAT..........................................................................	23	1	386.00	0.00	386.00	0.00	0.00	0.00
...........................................................................CTTGAGCGTGTGACAGCGGCT............................................................................	21	1	378.00	0.00	326.00	0.00	0.00	52.00
...........................................................................CTTGTGCGTGTGACATCGGCT............................................................................	21	1	365.00	0.00	163.00	0.00	7.00	195.00
...........................................................................CTTGTGCGTGTGCCAGCGGCT............................................................................	21	1	362.00	0.00	347.00	0.00	0.00	15.00
...........................................................................CTTGTGCGTGTGACAGAGGCT............................................................................	21	1	353.00	0.00	308.00	0.00	2.00	43.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATTT........................................................................	25	1	345.00	0.00	344.00	0.00	0.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAG..........................................................................	23	1	343.00	0.00	334.00	0.00	0.00	9.00
...........................................................................CTTGTGCGTTTGACAGCGGCT............................................................................	21	1	342.00	0.00	58.00	0.00	6.00	278.00
...........................................................................CTTGTGCGTGTGACAGCGCCT............................................................................	21	1	341.00	0.00	335.00	0.00	0.00	6.00
...........................................................................CTTGTGCGTGTGTCAGCGGCT............................................................................	21	1	327.00	0.00	317.00	0.00	0.00	10.00
...........................................................................CTTGTGCGTGTGACAGCGGAC............................................................................	21	1	324.00	0.00	4.00	0.00	5.00	315.00
...........................................................................ATTGTGCGTGTGACAGCGGCT............................................................................	21	1	322.00	0.00	310.00	0.00	1.00	11.00
...........................................................................CTTGTGCGTGGGACAGCGGCT............................................................................	21	1	307.00	0.00	265.00	0.00	1.00	41.00
...........................................................................CTGGTGCGTGTGACAGCGGCT............................................................................	21	1	305.00	0.00	300.00	0.00	0.00	5.00
............................................................................TTGGGCGTGTGACAGCGGCT............................................................................	20	1	300.00	0.00	289.00	0.00	1.00	10.00
............................................................................TTGTGCGTGTGACAGCGGCTATG.........................................................................	23	1	296.00	1.00	178.00	0.00	2.00	115.00
............................................................................TTGCGCGTGTGACAGCGGCTAT..........................................................................	22	1	290.00	0.00	290.00	0.00	0.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGA.............................................................................	20	1	290.00	0.00	268.00	0.00	2.00	20.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATC.........................................................................	24	1	282.00	0.00	273.00	0.00	0.00	9.00
...........................................................................CTTGTGCGTGTGACAGCGTCT............................................................................	21	1	280.00	0.00	270.00	0.00	0.00	10.00
...........................................................................CTTGTGCGTGTGACACCGGCT............................................................................	21	1	280.00	0.00	262.00	0.00	1.00	17.00
............................................................................TTGTGCGTGTGACAGCGTA.............................................................................	19	1	280.00	0.00	271.00	0.00	1.00	8.00
...........................................................................CCTGTGCGTGTGACAGCGGCT............................................................................	21	1	272.00	0.00	142.00	0.00	2.00	128.00
............................................................................TTGTGCGTGTGACAGCGGCTATC.........................................................................	23	1	270.00	0.00	267.00	0.00	0.00	3.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATG.........................................................................	24	1	268.00	0.00	141.00	0.00	2.00	125.00
...........................................................................CTTGTGCGTGTGAAAGCGGCT............................................................................	21	1	265.00	0.00	256.00	0.00	0.00	9.00
...........................................................................CGTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	254.00	0.00	254.00	0.00	0.00	0.00
...........................................................................CTTGTGCGTGTGACGGCGGCT............................................................................	21	1	246.00	0.00	152.00	0.00	0.00	94.00
.............................................................................CTTGCGTGTGACAGCGGCT............................................................................	19	1	246.00	0.00	3.00	0.00	11.00	232.00
............................................................................TTGTGCGTGTGACAGCGGCTATTT........................................................................	24	1	237.00	1.00	236.00	0.00	0.00	0.00
............................................................................TTGTGCGTGGGACAGCGGCTAT..........................................................................	22	1	232.00	0.00	232.00	0.00	0.00	0.00
...........................................................................CTTGTTCGTGTGACAGCGGCT............................................................................	21	1	232.00	0.00	43.00	0.00	7.00	182.00
...........................................................................CTTGTGTGTGTGACAGCGGCT............................................................................	21	1	226.00	0.00	118.00	0.00	1.00	107.00
............................................................................TTGTGCGTGTGACAGCGGTTT...........................................................................	21	1	225.00	0.00	224.00	0.00	0.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCTGT..........................................................................	23	1	221.00	0.00	219.00	0.00	0.00	2.00
...........................................................................CTTGTGCxTGTGACAGCGGCT............................................................................	20	1	215.00	0.00	1.00	0.00	8.00	206.00
...........................................................................CTTTTGCGTGTGACAGCGGCT............................................................................	21	1	212.00	0.00	39.00	0.00	3.00	170.00
...........................................................................CTTGTGCGTGTGACAGAGGCTAT..........................................................................	23	1	211.00	0.00	211.00	0.00	0.00	0.00
...........................................................................CTTGTGCGTGTGACAGCAGCT............................................................................	21	1	207.00	1.00	131.00	0.00	2.00	73.00
...........................................................................CTTGTCCGTGTGACAGCGGCT............................................................................	21	1	205.00	0.00	139.00	0.00	0.00	66.00
............................................................................TTGTGCGTGTGACAGCGGCA............................................................................	20	1	203.00	2.00	185.00	0.00	0.00	16.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTTT.........................................................................	24	1	202.00	0.00	168.00	0.00	1.00	33.00
...........................................................................CTTGTGCGTGTGACCGCGGCT............................................................................	21	1	201.00	0.00	193.00	0.00	0.00	8.00
...........................................................................CTTGTGCGTGTGACTGCGGCT............................................................................	21	1	199.00	0.00	193.00	0.00	0.00	6.00
............................................................................TTGGGCGTGTGACAGCGGCTA...........................................................................	21	1	192.00	0.00	187.00	0.00	1.00	4.00
...........................................................................CTTGTGCGTGCGACAGCGGCTAT..........................................................................	23	1	192.00	0.00	190.00	0.00	0.00	2.00
...........................................................................CGTGTGAGTGTGACAGCGGCT............................................................................	21	1	188.00	0.00	188.00	0.00	0.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTGT..........................................................................	22	1	186.00	0.00	186.00	0.00	0.00	0.00
...........................................................................CTTGTGAGTGTGACAGCGGCTA...........................................................................	22	1	185.00	0.00	181.00	0.00	0.00	4.00

droMoj3

CCAGAT---CCATTGG-----GAACGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTCA--AGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGATGCCAGAGAAGCAACA---------------------------------------------------	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
...........................................................................CTTGTGCGTGTGACAGCGGCT............................................................................	21	1	227877.00	1560.00	124396.00	101916.00	5.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	179738.00	1986.00	99192.00	78534.00	26.00
............................................................................TTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	122354.00	1287.00	66786.00	54259.00	22.00
...........................................................................CTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	52828.00	573.00	30934.00	21319.00	2.00
............................................................................TTGTGCGTGTGACAGCGGCTA...........................................................................	21	1	38104.00	329.00	21378.00	16391.00	6.00
............................................................................TTGTGCGTGTGACAGCGGCT............................................................................	20	1	33452.00	470.00	18085.00	14896.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCTT...........................................................................	22	1	29188.00	193.00	17327.00	11668.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGC.............................................................................	20	1	17355.00	181.00	8908.00	8262.00	4.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATT.........................................................................	24	1	12389.00	239.00	8305.00	3843.00	2.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTT..........................................................................	23	1	9678.00	56.00	5376.00	4246.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAC..........................................................................	23	1	9540.00	69.00	4808.00	4663.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATT.........................................................................	23	1	9299.00	139.00	6073.00	3086.00	1.00
............................................................................TTGTGCGTGTGACAGCGGCTT...........................................................................	21	1	6397.00	56.00	3697.00	2644.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATTT........................................................................	25	1	6238.00	83.00	4318.00	1837.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTC...........................................................................	22	1	4644.00	0.00	1705.00	2939.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTCT..........................................................................	23	1	4566.00	1.00	988.00	3575.00	2.00
............................................................................TTGTGCGTGTGACAGCGGCTATTT........................................................................	24	1	3684.00	42.00	2637.00	1005.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAA..........................................................................	23	1	3391.00	23.00	1531.00	1837.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTTT..........................................................................	22	1	3281.00	21.00	1907.00	1353.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGG..............................................................................	19	1	2648.00	34.00	1646.00	968.00	0.00
...........................................................................CTTGTGCGTGTGACCGCGGCT............................................................................	21	1	2109.00	0.00	294.00	1815.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTTT.........................................................................	24	1	2032.00	14.00	1210.00	808.00	0.00
............................................................................TTGTGCGTGTGACAGCGGC.............................................................................	19	1	1783.00	25.00	816.00	941.00	1.00
............................................................................TTGTGCGTGTGACAGCGGCTAC..........................................................................	22	1	1750.00	4.00	849.00	897.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGT.............................................................................	20	1	1623.00	8.00	902.00	713.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTCT..........................................................................	22	1	1600.00	2.00	338.00	1259.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGTT............................................................................	21	1	1372.00	5.00	863.00	504.00	0.00
...........................................................................CTTGTGCGTGTGACCGCGGCTAT..........................................................................	23	1	1365.00	0.00	194.00	1171.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCA............................................................................	21	1	1344.00	13.00	730.00	601.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAA..........................................................................	22	1	1324.00	4.00	661.00	659.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATA.........................................................................	24	1	1293.00	22.00	743.00	528.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATA.........................................................................	23	1	1267.00	13.00	716.00	538.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAG..........................................................................	23	1	1255.00	2.00	667.00	586.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTG...........................................................................	22	1	1175.00	3.00	722.00	450.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAG..........................................................................	22	1	1087.00	0.00	559.00	528.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACT.........................................................................	24	1	1059.00	9.00	604.00	446.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTC...........................................................................	21	1	1020.00	0.00	312.00	708.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATC.........................................................................	24	1	870.00	1.00	418.00	451.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGTTT...........................................................................	22	1	812.00	10.00	476.00	326.00	0.00
...........................................................................TTTGTGCGTGTGACAGCGGCT............................................................................	21	1	781.00	0.00	651.00	130.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTTTT.........................................................................	23	1	776.00	3.00	468.00	305.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTTTT........................................................................	25	1	744.00	6.00	441.00	297.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACC.........................................................................	24	1	682.00	2.00	371.00	308.00	1.00
...........................................................................CTTGTGCGTGTGTCAGCGGCT............................................................................	21	1	680.00	0.00	342.00	338.00	0.00
...........................................................................CTTGTGCGTGCGACAGCGGCT............................................................................	21	1	674.00	1.00	387.00	286.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATG.........................................................................	23	1	667.00	5.00	444.00	218.00	0.00
............................................................................TTGCGCGTGTGACAGCGGCTAT..........................................................................	22	1	638.00	2.00	382.00	254.00	0.00
...........................................................................TTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	638.00	0.00	525.00	113.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTA..........................................................................	23	1	627.00	10.00	354.00	263.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATC.........................................................................	23	1	625.00	1.00	336.00	288.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTG..........................................................................	23	1	614.00	0.00	394.00	220.00	0.00
...........................................................................CTTGCGCGTGTGACAGCGGCT............................................................................	21	1	601.00	1.00	415.00	185.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGTCT............................................................................	21	1	599.00	0.00	267.00	332.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAAT.........................................................................	24	1	585.00	0.00	243.00	342.00	0.00
...........................................................................CTTGTGCGTGTGCCAGCGGCT............................................................................	21	1	569.00	0.00	252.00	317.00	0.00
...........................................................................CTTGTGCGTGTGACAGAGGCT............................................................................	21	1	546.00	0.00	362.00	184.00	0.00
...........................................................................CTTGTGCGTGCGACAGCGGCTAT..........................................................................	23	1	539.00	4.00	319.00	216.00	0.00
............................................................................TTGGGCGTGTGACAGCGGCTAT..........................................................................	22	1	531.00	1.00	363.00	167.00	0.00
...........................................................................CTTGTGCGCGTGACAGCGGCT............................................................................	21	1	489.00	3.00	291.00	195.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATTTT.......................................................................	26	1	482.00	20.00	356.00	106.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTAAT.........................................................................	23	1	480.00	0.00	142.00	338.00	0.00
...........................................................................CTTGTGCGTGTGACAGCTGCT............................................................................	21	1	465.00	1.00	122.00	342.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATG.........................................................................	24	1	463.00	8.00	309.00	146.00	0.00
............................................................................TTGTGCGTGTGACCGCGGCTAT..........................................................................	22	1	458.00	0.00	69.00	389.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATAT........................................................................	25	1	453.00	6.00	264.00	183.00	0.00
...........................................................................ATTGTGCGTGTGACAGCGGCT............................................................................	21	1	449.00	2.00	335.00	112.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTATTTT.......................................................................	25	1	446.00	7.00	343.00	96.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTGT..........................................................................	23	1	429.00	5.00	286.00	138.00	0.00
............................................................................TTGTGCGTGTGACAGCGGCTTG..........................................................................	22	1	423.00	1.00	243.00	179.00	0.00
...........................................................................CTTGCGCGTGTGACAGCGGCTAT..........................................................................	23	1	418.00	3.00	289.00	126.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCG............................................................................	21	1	414.00	0.00	206.00	208.00	0.00
...........................................................................CGTGTGCGTGTGACAGCGGCT............................................................................	21	1	411.00	0.00	226.00	185.00	0.00
...........................................................................CTTGTGCGTGTGACAGAGGCTAT..........................................................................	23	1	410.00	3.00	264.00	143.00	0.00
...........................................................................CTTGTGCGTGTGAAAGCGGCT............................................................................	21	1	409.00	0.00	218.00	191.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTACA.........................................................................	24	1	406.00	6.00	231.00	169.00	0.00
...........................................................................ATTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	389.00	1.00	290.00	98.00	0.00
...........................................................................CTTGTGCGTGGGACAGCGGCT............................................................................	21	1	386.00	0.00	201.00	185.00	0.00
...........................................................................CTTGTGCGTGTGACACCGGCT............................................................................	21	1	379.00	1.00	267.00	111.00	0.00
...........................................................................CTTGTGAGTGTGACAGCGGCT............................................................................	21	1	377.00	1.00	251.00	125.00	0.00
...........................................................................CTTGTGCGTGTGTCAGCGGCTAT..........................................................................	23	1	371.00	0.00	208.00	163.00	0.00
...........................................................................CTTGTGCGTGTGACATCGGCT............................................................................	21	1	369.00	3.00	143.00	223.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGTCTAT..........................................................................	23	1	368.00	5.00	147.00	216.00	0.00
...........................................................................CTTGGGCGTGTGACAGCGGCT............................................................................	21	1	367.00	1.00	235.00	131.00	0.00
............................................................................TTGTGCGTGTGCCAGCGGCTAT..........................................................................	22	1	366.00	0.00	72.00	294.00	0.00
...........................................................................CTTGTGCGTGTGACAGCTGCTAT..........................................................................	23	1	365.00	2.00	77.00	286.00	0.00
...........................................................................CTTGTGCGTGTGGCAGCGGCT............................................................................	21	1	364.00	1.00	202.00	161.00	0.00
...........................................................................CTTGTGCGTGTGACCGCGGCTA...........................................................................	22	1	363.00	0.00	48.00	315.00	0.00
...........................................................................CTTGTGCGTGTTACAGCGGCT............................................................................	21	1	362.00	0.00	152.00	210.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCC............................................................................	21	1	362.00	1.00	206.00	155.00	0.00
...........................................................................CTTGTGCGTGTGCCAGCGGCTAT..........................................................................	23	1	359.00	0.00	154.00	205.00	0.00
...........................................................................CCTGTGCGTGTGACAGCGGCT............................................................................	21	1	353.00	0.00	190.00	163.00	0.00
...........................................................................CTTGTGCGCGTGACAGCGGCTAT..........................................................................	23	1	345.00	5.00	206.00	134.00	0.00
............................................................................TTGTGCGTGCGACAGCGGCTAT..........................................................................	22	1	332.00	2.00	205.00	124.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCTCC..........................................................................	23	1	328.00	0.00	105.00	223.00	0.00
...........................................................................CTTGTGCGTGTGACAGCAGCT............................................................................	21	1	322.00	3.00	117.00	202.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTTC..........................................................................	23	1	318.00	2.00	166.00	150.00	0.00
...........................................................................CTTGAGCGTGTGACAGCGGCT............................................................................	21	1	318.00	0.00	259.00	59.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGCCT............................................................................	21	1	317.00	0.00	247.00	70.00	0.00
...........................................................................CTTGTGCGTGTGACAGCGGCTCTT.........................................................................	24	1	311.00	0.00	74.00	237.00	0.00
............................................................................TTGTGCGTGTGACAGAGGCTAT..........................................................................	22	1	307.00	1.00	204.00	102.00	0.00
...........................................................................CTTGTGCGTGTGACGGCGGCT............................................................................	21	1	302.00	1.00	188.00	113.00	0.00

droGri2

TGGCG--------CT--CAATAATCGGAGCTTATTGGAGCTGCTGGCCACTGCACAAGATTAGATTCAAAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGACCAGATA----ACAT--------------------------------CAAGCCAT----------	Size	Hit Count	Total Norm	V109 Male body
............................................................................TTGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	54.00	54.00
...........................................................................CTTGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	40.00	40.00
............................................................................TTGTGCGTGTGACAGCGGCT............................................................................	20	1	32.00	32.00
...........................................................................CTTGTGCGTGTGACAGCGGCT............................................................................	21	1	25.00	25.00
............................................................................TTGTGCGTGTGACAGCGGCTA...........................................................................	21	1	9.00	9.00
...........................................................................CTTGTGCGTGTGACAGCGGCTA...........................................................................	22	1	2.00	2.00
...........................................................................CTCGTGCGTGTGACAGCGGCTAT..........................................................................	23	1	1.00	1.00
............................................................................TTGTGCGTGTGACAGCGGCTATT.........................................................................	23	1	1.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGC.............................................................................	20	1	1.00	1.00
............................................................................TTGTGCGTGTGACAGCGTT.............................................................................	19	1	1.00	1.00
............................................................................TTGTGCGTGTGACAGCGCCTAT..........................................................................	22	1	1.00	1.00
............................................................................TTGTGCGTGTGACAGCGGC.............................................................................	19	1	1.00	1.00
...........................................................................CTTGTGCTTGTGACAGCGGCTA...........................................................................	22	1	1.00	1.00
..................................AGAAGCTGCTGGCCACTG........................................................................................................................	18	1	1.00	1.00
.............................................................................TGTGCGTGTGACAGCGGCT............................................................................	19	1	1.00	1.00
............................................................................TTGTGCCTGTGACAGCGGCT............................................................................	20	1	1.00	1.00
............................................................................TTGTGCGTTTGACAGCGGCTA...........................................................................	21	1	1.00	1.00
............................................................................TTGTGCGTGTGACATCGGCT............................................................................	20	1	1.00	1.00
..........................................................................TCTTGTGCGTGTGACAGCGGCTAT..........................................................................	24	1	1.00	1.00
...........................................................................CTTGTGCGTGTGACAGTGGCTAT..........................................................................	23	1	1.00	1.00
............................................................................TTATGCGTGTGACAGCGGCTAT..........................................................................	22	1	1.00	1.00
............................................................................TCGTGCGTGTGACAGCGGCTAT..........................................................................	22	1	1.00	1.00
............................................................................TTTTGCGTGTGACAGCGGCTAT..........................................................................	22	1	1.00	1.00
............................................................................TTGTGCGTGTGACAGCGGCC............................................................................	20	1	1.00	1.00
............................................................................TTGTGAGTGTGACAGCGGCT............................................................................	20	1	1.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCTATT.........................................................................	24	1	1.00	1.00
............................................................................TTGTGCGTGTGACAGCGGCTATA.........................................................................	23	1	1.00	1.00
...........................................................................CTTGTGCGTGTGACAGCGGCCATT.........................................................................	24	1	1.00	1.00

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image