Possible Orthologs for dme-mir-210

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chrX_random:4635946-4636075 +	98.46	CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGCCAGCCATTGTTCCATC CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGCCAGCCATTGTTCCATC Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..................................................................CTTGTGCGTGTGACAGCGGCT........................................... 21 1 524740.00 5.00 522666.00 750.00 1319.00 ..................................................................CTTGTGCGTGTGACAGCGGCC........................................... 21 1 87949.00 0.00 87664.00 92.00 193.00 ...................................................................TTGTGCGTGTGACAGCGGCT........................................... 20 1 86735.00 11.00 86067.00 430.00 227.00 ..................................................................CTTGTGCGTGTGACAGCGGCTA.......................................... 22 1 47705.00 10.00 47476.00 89.00 130.00 ...................................................................TTGTGCGTGTGACAGCGGCTA.......................................... 21 1 38109.00 4.00 37967.00 48.00 90.00 ..................................................................CTTGTGCGTGTGACAGCGGCTT.......................................... 22 1 32557.00 1.00 32406.00 59.00 91.00 ..................................................................CTTGTGCGTGTGACAGCGGCG........................................... 21 1 17308.00 0.00 17206.00 47.00 55.00 ..................................................................CTTGTGCGTGTGACAGCGGC............................................ 20 1 16821.00 1.00 16756.00 20.00 44.00 ...................................................................TTGTGCGTGTGACAGCGGCC........................................... 20 1 14174.00 0.00 14107.00 51.00 16.00 ...................................................................TTGTGCGTGTGACAGCGGCTT.......................................... 21 1 6452.00 1.00 6416.00 20.00 15.00 ...................................................................TTGTGCGTGTGACAGCGGC............................................ 19 1 4607.00 1.00 4585.00 14.00 7.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAT......................................... 23 1 3712.00 32.00 3663.00 5.00 12.00 ...................................................................TTGTGCGTGTGACAGCGGCG........................................... 20 1 2833.00 0.00 2795.00 21.00 17.00 ..................................................................CTTGTGCTTGTGACAGCGGCT........................................... 21 1 2078.00 0.00 2059.00 1.00 18.00 ...................................................................TTGTGCGTGTGACAGCGGCTAT......................................... 22 1 1886.00 29.00 1848.00 3.00 6.00 ..................................................................CTTGTGCGTTTGACAGCGGCT........................................... 21 1 1601.00 0.00 1595.00 1.00 5.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAA......................................... 23 1 1453.00 1.00 1439.00 2.00 11.00 ..................................................................CTTGTGCGTGTGACATCGGCT........................................... 21 1 1429.00 0.00 1423.00 1.00 5.00 ..................................................................CTTGTTCGTGTGACAGCGGCT........................................... 21 1 1193.00 0.00 1188.00 0.00 5.00 ..................................................................CTTGTGCGTGTGACAGCGGAC........................................... 21 1 1146.00 0.00 1145.00 0.00 1.00 ....................................................................CTTGCGTGTGACAGCGGCT........................................... 19 1 1074.00 0.00 1067.00 2.00 5.00 ..................................................................CTTGTGCGTGTGACAGCGGCTC.......................................... 22 1 1031.00 1.00 1026.00 2.00 2.00 ..................................................................CTTGTGCxTGTGACAGCGGCT........................................... 20 1 1018.00 0.00 1010.00 1.00 7.00 ..................................................................CTTGTGCGGGTGACAGCGGCT........................................... 21 1 985.00 0.00 985.00 0.00 0.00 ..................................................................CTTGTGCGCGTGACAGCGGCT........................................... 21 1 952.00 0.00 949.00 1.00 2.00 ..................................................................CTTTTGCGTGTGACAGCGGCT........................................... 21 1 899.00 0.00 897.00 0.00 2.00 ..................................................................CTTGTGCxxGTGACAGCGGCT........................................... 19 1 747.00 0.00 745.00 0.00 2.00 ..................................................................CTTGTGCCTGTGACAGCGGCT........................................... 21 1 724.00 0.00 721.00 1.00 2.00 ...................................................................TTGTGCTTGTGACAGCGGCT........................................... 20 1 667.00 0.00 661.00 2.00 4.00 ..................................................................CTTGTGCGTGTGGCAGCGGCT........................................... 21 1 660.00 0.00 659.00 0.00 1.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAC......................................... 23 1 610.00 2.00 606.00 0.00 2.00 ..................................................................CTTGTGCGTGTGACAGCGAC............................................ 20 1 573.00 0.00 571.00 0.00 2.00 ..................................................................CTTGTGCGTCTGACAGCGGCT........................................... 21 1 562.00 0.00 560.00 1.00 1.00 ..................................................................CTTGTGCGTGTGACAGCGGCTG.......................................... 22 1 520.00 0.00 520.00 0.00 0.00 ..................................................................CTTGTGCGTGCGACAGCGGCT........................................... 21 1 500.00 0.00 499.00 0.00 1.00 ..................................................................CTTGTGTGTGTGACAGCGGCT........................................... 21 1 496.00 0.00 494.00 0.00 2.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATT........................................ 24 1 479.00 0.00 475.00 1.00 3.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATA........................................ 24 1 459.00 1.00 455.00 1.00 2.00 ...................................................................TTGTGCGTTTGACAGCGGCT........................................... 20 1 459.00 0.00 455.00 2.00 2.00 ..................................................................CCTGTGCGTGTGACAGCGGCT........................................... 21 1 440.00 0.00 439.00 0.00 1.00 ..................................................................CTTGTGCGTGTGACAGCGGCA........................................... 21 1 426.00 0.00 425.00 0.00 1.00 ..................................................................CTTGTCCGTGTGACAGCGGCT........................................... 21 1 420.00 0.00 419.00 0.00 1.00 ..................................................................CTTGTGCTTGTGACAGCGGCC........................................... 21 1 405.00 0.00 405.00 0.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTTT......................................... 23 1 402.00 0.00 400.00 2.00 0.00 .....................................................................CTGCGTGTGACAGCGGCT........................................... 18 1 396.00 0.00 395.00 0.00 1.00 ..................................................................CTTGTxCGTGTGACAGCGGCT........................................... 20 1 389.00 0.00 386.00 1.00 2.00 ...................................................................TTGTGCGTGTGACATCGGCT........................................... 20 1 349.00 0.00 347.00 2.00 0.00 ..................................................................CTTCTGCGTGTGACAGCGGCT........................................... 21 1 343.00 0.00 341.00 1.00 1.00 ...................................................................TTGTGCGTGTGACAGCGGCTATG........................................ 23 1 303.00 0.00 301.00 1.00 1.00 ...................................................................TTGTGCxTGTGACAGCGGCT........................................... 19 1 303.00 0.00 303.00 0.00 0.00 ..................................................................CTTGTGCGTGGGACAGCGGCT........................................... 21 1 300.00 0.00 298.00 1.00 1.00 ...................................................................TTGTGCGTGTGACAGCGGCTC.......................................... 21 1 300.00 0.00 296.00 4.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTAA......................................... 22 1 296.00 0.00 295.00 0.00 1.00 ..................................................................CTTGTGCGTGTGACGGCGGCT........................................... 21 1 295.00 0.00 295.00 0.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTG.......................................... 21 1 291.00 0.00 290.00 0.00 1.00 ..................................................................CTTGTGCGTTTGACAGCGGCC........................................... 21 1 284.00 0.00 283.00 1.00 0.00 ..................................................................CTTGTGCGTGTCACAGCGGCT........................................... 21 1 276.00 0.00 275.00 0.00 1.00 ....................................................................CTTGCGTGTGACAGCGGCTA.......................................... 20 1 267.00 0.00 264.00 0.00 3.00 ..................................................................CTTGTGCATGTGACAGCGGCT........................................... 21 1 262.00 0.00 261.00 1.00 0.00 ..................................................................CTTGTGCGTGTGACATCGGCC........................................... 21 1 262.00 0.00 262.00 0.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGAC........................................... 20 1 260.00 0.00 259.00 0.00 1.00 ...................................................................CTTTGCGTGTGACAGCGGCT........................................... 20 1 250.00 0.00 250.00 0.00 0.00 ..................................................................CTTGTACGTGTGACAGCGGCT........................................... 21 1 236.00 0.00 235.00 1.00 0.00 .....................................................................TTGCGTGTGACAGCGGCTA.......................................... 19 1 234.00 0.00 233.00 0.00 1.00 ...................................................................TTGTGCCTGTGACAGCGGCT........................................... 20 1 231.00 0.00 231.00 0.00 0.00 ..................................................................CTTGCGCGTGTGACAGCGGCT........................................... 21 1 230.00 0.00 227.00 1.00 2.00 ..................................................................CTTGTGCGTxTGACAGCGGCT........................................... 20 1 225.00 0.00 225.00 0.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATG........................................ 24 1 225.00 0.00 222.00 2.00 1.00 ..................................................................CTTGGGCGTGTGACAGCGGCT........................................... 21 1 221.00 0.00 221.00 0.00 0.00 .....................................................................TTGCGTGTGACAGCGGCT........................................... 18 1 220.00 0.00 218.00 0.00 2.00 ...................................................................TTGTGCGCGTGACAGCGGCT........................................... 20 1 208.00 0.00 208.00 0.00 0.00 ..................................................................CTTGTGCTTGTGACAGCGGCTT.......................................... 22 1 204.00 0.00 202.00 0.00 2.00 ...................................................................TTGTGCGTGTGACAGCGGCTATA........................................ 23 1 203.00 0.00 202.00 0.00 1.00 ...................................................................TTGTGCxxGTGACAGCGGCT........................................... 18 1 199.00 0.00 199.00 0.00 0.00 ..................................................................CTTGTxxGTGTGACAGCGGCT........................................... 19 1 192.00 0.00 192.00 0.00 0.00 ...................................................................TTGTTCGTGTGACAGCGGCT........................................... 20 1 186.00 0.00 186.00 0.00 0.00 ...................................................................TTTTGCGTGTGACAGCGGCT........................................... 20 1 184.00 0.00 184.00 0.00 0.00 ..................................................................CTTGTTCGTGTGACAGCGGCC........................................... 21 1 184.00 0.00 184.00 0.00 0.00 ..................................................................CTTGTGCGTGTGACAGCAGCT........................................... 21 1 180.00 0.00 180.00 0.00 0.00 ..................................................................CTTGTGCGTGTGATAGCGGCT........................................... 21 1 176.00 0.00 175.00 0.00 1.00 ..................................................................CTTGTGCGTGTTACAGCGGCT........................................... 21 1 174.00 0.00 173.00 1.00 0.00 ...................................................................TTGTGCGTGTGACAGCGAC............................................ 19 1 173.00 0.00 173.00 0.00 0.00 ..................................................................CTTATGCGTGTGACAGCGGCT........................................... 21 1 173.00 0.00 172.00 1.00 0.00 ..................................................................CTTGTGCGTGTGACGGCT.............................................. 18 1 168.00 0.00 167.00 0.00 1.00 ..................................................................CTTTTGCGTGTGACAGCGGCTA.......................................... 22 1 167.00 0.00 167.00 0.00 0.00 ...................................................................TTGTGCGTCTGACAGCGGCT........................................... 20 1 164.00 0.00 163.00 0.00 1.00 ..................................................................CTTGTGCGTGTGGCAGCGGCC........................................... 21 1 162.00 0.00 160.00 0.00 2.00 ...................................................................TTTTGCGTGTGACAGCGGCTA.......................................... 21 1 159.00 0.00 158.00 1.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTACC........................................ 24 1 154.00 0.00 151.00 1.00 2.00 ..................................................................CTTGTGCGTGTGGCAGCGGCTT.......................................... 22 1 152.00 0.00 151.00 0.00 1.00 ..................................................................CTTGTGCxTGTGACAGCGGCC........................................... 20 1 152.00 0.00 151.00 0.00 1.00 ..................................................................CTTGTGCGTGTGACAGTGGCT........................................... 21 1 149.00 0.00 149.00 0.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGACT........................................... 21 1 147.00 0.00 147.00 0.00 0.00 ..................................................................CTTGTGCGTGTGACACCGGCT........................................... 21 1 147.00 0.00 147.00 0.00 0.00 ..................................................................CTTGTGCGTGTAACAGCGGCT........................................... 21 1 143.00 0.00 143.00 0.00 0.00 ...................................................................TTGTGCGGGTGACAGCGGCT........................................... 20 1 142.00 0.00 142.00 0.00 0.00 ..................................................................CTTGTGCGTATGACAGCGGCT........................................... 21 1 141.00 0.00 141.00 0.00 0.00 ...................................................................TTGTGCGTTTGACAGCGGCTA.......................................... 21 1 139.00 0.00 138.00 0.00 1.00 ..................................................................CTTGTGCGTGTGACAGCGGG............................................ 20 1 138.00 0.00 133.00 2.00 3.00 ..................................................................CTTTTGCGTGTGACAGCGGCC........................................... 21 1 132.00 0.00 132.00 0.00 0.00 .....................................................................CTGCGTGTGACAGCGGCTA.......................................... 19 1 129.00 0.00 129.00 0.00 0.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_8:332193-332322 +	98.46	CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGCCAGCCATTGTTCCATC CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGCCAGCCATTGTTCCATC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..................................................................CTTGTGCGTGTGACAGCGGCT........................................... 21 1 128751.00 393.00 124.00 128234.00 ...................................................................TTGTGCGTGTGACAGCGGCTAT......................................... 22 1 59465.00 162.00 134.00 59169.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAT......................................... 23 1 57140.00 142.00 123.00 56875.00 ..................................................................CTTGTGCGTGTGACAGCGGCTA.......................................... 22 1 32192.00 55.00 40.00 32097.00 ...................................................................TTGTGCGTGTGACAGCGGCT........................................... 20 1 31314.00 661.00 55.00 30598.00 ...................................................................TTGTGCGTGTGACAGCGGCTA.......................................... 21 1 30387.00 104.00 44.00 30239.00 ..................................................................CTTGTGCGTGTGACAGCGGC............................................ 20 1 28191.00 75.00 29.00 28087.00 ..................................................................CTTGTGCGTGTGACAGCGGCTT.......................................... 22 1 13944.00 37.00 14.00 13893.00 ...................................................................TTGTGCGTGTGACAGCGGCTT.......................................... 21 1 6925.00 48.00 5.00 6872.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAC......................................... 23 1 6379.00 17.00 17.00 6345.00 ..................................................................CTTGTGCGTGTGACAGCGG............................................. 19 1 5829.00 15.00 7.00 5807.00 ...................................................................TTGTGCGTGTGACAGCGGC............................................ 19 1 4601.00 13.00 5.00 4583.00 ..................................................................CTTGTGCGTGTGACAGCGGCA........................................... 21 1 3971.00 14.00 5.00 3952.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAA......................................... 23 1 2422.00 6.00 3.00 2413.00 ...................................................................TTGTGCGTGTGACAGCGGCTAA......................................... 22 1 2154.00 4.00 4.00 2146.00 ...................................................................TTGTGCGTGTGACAGCGGCTATT........................................ 23 1 2064.00 3.00 0.00 2061.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATT........................................ 24 1 1545.00 2.00 6.00 1537.00 ...................................................................TTGTGCGTGTGACAGCGGCTATA........................................ 23 1 1329.00 3.00 3.00 1323.00 ..................................................................CTTGTGCGTGTGACAGCGGCTTT......................................... 23 1 1318.00 6.00 1.00 1311.00 ..................................................................CTTGTGCGTGTGACAGCGGT............................................ 20 1 1315.00 2.00 1.00 1312.00 ..................................................................CTTGTGCGTGTGACAGCGGA............................................ 20 1 1307.00 3.00 2.00 1302.00 ...................................................................TTGTGCGTGTGACAGCGGCTTT......................................... 22 1 1298.00 5.00 2.00 1291.00 ..................................................................CTTGTGCGTGTGACAGCGGCTACC........................................ 24 1 1249.00 2.00 11.00 1236.00 ...................................................................TTGTGCGTGTGACAGCGGCTAC......................................... 22 1 1174.00 2.00 4.00 1168.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATA........................................ 24 1 826.00 3.00 1.00 822.00 ...................................................................TTGTGCGTGTGACAGCGGT............................................ 19 1 766.00 2.00 0.00 764.00 ...................................................................TTGTGCGTGTGACAGCGGCTAG......................................... 22 1 755.00 1.00 0.00 754.00 ...................................................................TTGTGCGTGTGACAGCGG............................................. 18 1 643.00 1.00 0.00 642.00 ..................................................................CTTGTGCGTGTGACAGCGGTT........................................... 21 1 603.00 6.00 0.00 597.00 ...................................................................TTGTGCGTGTGACAGCGGTTT.......................................... 21 1 595.00 9.00 1.00 585.00 ...................................................................TTGTGCGTGTGACAGCGGA............................................ 19 1 503.00 3.00 0.00 500.00 ..................................................................CTTGTGCGTGTGACAGCGGTTT.......................................... 22 1 444.00 4.00 0.00 440.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAG......................................... 23 1 443.00 0.00 1.00 442.00 ...................................................................TTGTGCGTGTGACAGCGGCTATTT....................................... 24 1 421.00 1.00 0.00 420.00 ..................................................................CTTGTGCGTGTGACAGCGGCTACA........................................ 24 1 411.00 1.00 2.00 408.00 ...................................................................TTGTGCGTGTGACAGCGGCA........................................... 20 1 405.00 2.00 0.00 403.00 ...................................................................TTGTGCGTGTGACAGCGTA............................................ 19 1 361.00 1.00 0.00 360.00 ...................................................................TTGTGCGTGTGACAGCGGTT........................................... 20 1 355.00 5.00 0.00 350.00 ...................................................................TTGTGCGTGTGACAGCGTT............................................ 19 1 336.00 1.00 1.00 334.00 ...................................................................TTGTGCGTGTGACAGCGGCTTA......................................... 22 1 328.00 3.00 0.00 325.00 ..................................................................CTTGTGCGTGTGACAGCGGAT........................................... 21 1 321.00 3.00 0.00 318.00 ...................................................................TTGTGCGTGTGACAGCGGCTATG........................................ 23 1 307.00 0.00 1.00 306.00 ..................................................................CTTGTGCGTGTGACAGCGGCTTA......................................... 23 1 302.00 0.00 0.00 302.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATTT....................................... 25 1 272.00 0.00 0.00 272.00 ..................................................................CTTGTGCGTGTGACAGCTGCT........................................... 21 1 262.00 1.00 0.00 261.00 ..................................................................CTTGTGCGTGTGACAGCGGCTC.......................................... 22 1 260.00 0.00 0.00 260.00 ..............................AGCTGCTGGCCACTGCACAAGA.............................................................................. 22 1 253.00 0.00 4.00 249.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAAA........................................ 24 1 249.00 0.00 0.00 249.00 ..................................................................CTTGTGCGTGTGACAGCGGCTG.......................................... 22 1 245.00 0.00 0.00 245.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATAA....................................... 25 1 244.00 1.00 1.00 242.00 ..................................................................CTTGTGCGCGTGACAGCGGCT........................................... 21 1 240.00 1.00 2.00 237.00 ..................................................................CTTGTACGTGTGACAGCGGCT........................................... 21 1 239.00 0.00 0.00 239.00 ..................................................................CTTGTGCGTGTGACAGCGGAA........................................... 21 1 235.00 0.00 0.00 235.00 ..................................................................CTTGTGCGTGTGACAGCGGCTTTT........................................ 24 1 224.00 0.00 0.00 224.00 ..................................................................CTTGTGAGTGTGACAGCGGCT........................................... 21 1 222.00 1.00 0.00 221.00 ..................................................................CTTGTGCGTGTGACAGCG.............................................. 18 1 208.00 0.00 0.00 208.00 ...................................................................TTGTGCGTGTGACAGCGGCTAAA........................................ 23 1 207.00 0.00 0.00 207.00 ...................................................................TTGTGCGTGTGACAGCTGCTAT......................................... 22 1 206.00 0.00 0.00 206.00 ..................................................................CTTGTGCGTGCGACAGCGGCT........................................... 21 1 204.00 0.00 0.00 204.00 ...................................................................TTGTGCGTGTGACAGCGGCTATAT....................................... 24 1 198.00 0.00 0.00 198.00 ..................................................................CTTGTGCATGTGACAGCGGCT........................................... 21 1 192.00 0.00 0.00 192.00 ...................................................................TTGTGCGTGTGACAGCGGCTAGA........................................ 23 1 192.00 1.00 0.00 191.00 ..................................................................CTTGCGCGTGTGACAGCGGCT........................................... 21 1 188.00 1.00 1.00 186.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATG........................................ 24 1 187.00 0.00 0.00 187.00 ..............................AGCTGCTGGCCACTGCACAAGAT............................................................................. 23 1 176.00 0.00 2.00 174.00 ...................................................................TTGTGCGTGTGACAGCGGCTTTT........................................ 23 1 175.00 1.00 0.00 174.00 ..................................................................CTTGTGCGTGTGACAGCGGTA........................................... 21 1 173.00 0.00 0.00 173.00 ...................................................................TTGTGCGTGTGACAGCGGTTA.......................................... 21 1 170.00 3.00 0.00 167.00 ..................................................................CTTGTGCGTGTGACAGCGGCC........................................... 21 1 170.00 0.00 1.00 169.00 ..................................................................CTTGTTCGTGTGACAGCGGCT........................................... 21 1 167.00 2.00 2.00 163.00 ....................................................................CTTGCGTGTGACAGCGGCT........................................... 19 1 165.00 0.00 1.00 164.00 ..................................................................ATTGTGCGTGTGACAGCGGCT........................................... 21 1 164.00 0.00 0.00 164.00 ..................................................................CTTGTGCGTGTGGCAGCGGCT........................................... 21 1 164.00 0.00 0.00 164.00 ..................................................................CTTGTGCGTGTGACAGCGGCG........................................... 21 1 163.00 0.00 0.00 163.00 ...................................................................TTGTGCGTGTGACAGCGGCTC.......................................... 21 1 163.00 2.00 0.00 161.00 ...................................................................TTGTGCGTGTGACAGCGGCTATAA....................................... 24 1 162.00 1.00 0.00 161.00 ..................................................................CTTGTGCGTGTGACAGCGACT........................................... 21 1 156.00 5.00 0.00 151.00 ..................................................................CTTGTGCGTGTGACATCGGCT........................................... 21 1 152.00 0.00 0.00 152.00 ..................................................................CTTGTGCGTATGACAGCGGCT........................................... 21 1 149.00 0.00 0.00 149.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATAT....................................... 25 1 149.00 2.00 0.00 147.00 ..................................................................CTTGTGCGTGTGACAGCTGCTAT......................................... 23 1 149.00 0.00 0.00 149.00 ..................................................................CTTGTGTGTGTGACAGCGGCT........................................... 21 1 149.00 0.00 2.00 147.00 ..................................................................CTTGTCCGTGTGACAGCGGCT........................................... 21 1 146.00 1.00 0.00 145.00 ..................................................................CTTGTGCGTGTGACAGCGGCTACT........................................ 24 1 143.00 0.00 0.00 143.00 ..................................................................CCTGTGCGTGTGACAGCGGCT........................................... 21 1 141.00 0.00 0.00 141.00 ...................................................................TTGTGCGTGTGACAGCGGAT........................................... 20 1 139.00 7.00 0.00 132.00 ..................................................................CTTGTGCGTGTGACAGCAGCT........................................... 21 1 139.00 0.00 0.00 139.00 ...................................................................TTGCGCGTGTGACAGCGGCTAT......................................... 22 1 135.00 0.00 0.00 135.00 .....................................................................TTGCGTGTGACAGCGGCTAT......................................... 20 1 134.00 0.00 1.00 133.00 ..................................................................CTTGTGCGTGTGACGGCGGCT........................................... 21 1 133.00 0.00 0.00 133.00 ..................................................................CTTGTGCGTGTGACAGCGCCT........................................... 21 1 132.00 7.00 0.00 125.00 ....................................................................TGTGCGTGTGACAGCGGCTAT......................................... 21 1 129.00 1.00 0.00 128.00 ..................................................................CTTGTGCGTGTGACAGCGTCT........................................... 21 1 128.00 2.00 0.00 126.00 ..................................................................CTTGTGCGTGTGACCGCGGCT........................................... 21 1 127.00 0.00 0.00 127.00 ..................................................................CTTATGCGTGTGACAGCGGCT........................................... 21 1 123.00 0.00 0.00 123.00 ..................................................................CTTGTGCGTGTGACAGCGCT............................................ 20 1 120.00 0.00 0.00 120.00 ...................................................................TTGTGCTTGTGACAGCGGCTAT......................................... 22 1 120.00 1.00 0.00 119.00 ...................................................................TTGTGCGTGTGACAGCGGCTG.......................................... 21 1 117.00 0.00 0.00 117.00 ..................................................................CTTGTGCGTGTGACAGCGGTTA.......................................... 22 1 116.00 0.00 0.00 116.00 ..................................................................CTTGTGCGTGTGACAGCGGTAA.......................................... 22 1 114.00 0.00 0.00 114.00 ..................................................................CTTGTGCGTGTGACAGCGTT............................................ 20 1 110.00 0.00 0.00 110.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chrX:16646312-16646441 +	92.4	CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGCCAGCCATTGTTCCATC CCATGTCGCGAACCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAACCAGCCATCGTCCCATA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..................................................................CTTGTGCGTGTGACAGCGGCT........................................... 21 1 162775.00 3.00 39959.00 432.00 58282.00 64099.00 ...................................................................TTGTGCGTGTGACAGCGGCTAT......................................... 22 1 99456.00 20.00 43495.00 490.00 55077.00 374.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAT......................................... 23 1 95052.00 16.00 38500.00 444.00 54905.00 1187.00 ...................................................................TTGTGCGTGTGACAGCGGCT........................................... 20 1 63225.00 3.00 20486.00 738.00 27824.00 14174.00 ...................................................................TTGTGCGTGTGACAGCGGCTA.......................................... 21 1 49852.00 5.00 18620.00 260.00 24635.00 6332.00 ..................................................................CTTGTGCGTGTGACAGCGGCTA.......................................... 22 1 47551.00 2.00 14129.00 188.00 22141.00 11091.00 ..................................................................CTTGTGCGTGTGACAGCGGCTT.......................................... 22 1 14782.00 0.00 3755.00 60.00 6741.00 4226.00 ..................................................................CTTGTGCGTGTGACAGCGGC............................................ 20 1 14052.00 2.00 4904.00 84.00 6804.00 2258.00 ..................................................................CTTGTGCGTGTGACAGCGGCC........................................... 21 1 12651.00 0.00 71.00 0.00 141.00 12439.00 ...................................................................TTGTGCGTGTGACAGCGGCTT.......................................... 21 1 7002.00 0.00 2344.00 49.00 3684.00 925.00 ...................................................................TTGTGCGTGTGACAGCGGC............................................ 19 1 5579.00 0.00 2357.00 32.00 2613.00 577.00 ..................................................................CTTGTGCGTGTGACAGCGGCTCT......................................... 23 1 3298.00 0.00 740.00 2.00 2552.00 4.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAA......................................... 23 1 3132.00 1.00 1311.00 14.00 1519.00 287.00 ...................................................................TTGTGCGTGTGACAGCGGCC........................................... 20 1 2782.00 0.00 31.00 0.00 48.00 2703.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATT........................................ 24 1 2716.00 0.00 743.00 14.00 1545.00 414.00 ..................................................................CTTGTGCGTGTGACAGCGGCG........................................... 21 1 2568.00 0.00 62.00 0.00 104.00 2402.00 ..................................................................CTTGTGCGTGTGACAGCGGCTC.......................................... 22 1 2545.00 0.00 716.00 0.00 1702.00 127.00 ...................................................................TTGTGCGTGTGACAGCGGCTATT........................................ 23 1 2520.00 0.00 833.00 23.00 1623.00 41.00 ..................................................................CTTGTGCGTGTGACAGCGGCTTT......................................... 23 1 2346.00 0.00 769.00 4.00 1505.00 68.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAC......................................... 23 1 2254.00 0.00 929.00 5.00 1270.00 50.00 ...................................................................TTGTGCGTGTGACAGCGGCTCT......................................... 22 1 2038.00 1.00 454.00 0.00 1580.00 3.00 ...................................................................TTGTGCGTGTGACAGCGGCTAA......................................... 22 1 2014.00 0.00 972.00 12.00 990.00 40.00 ...................................................................TTGTGCGTGTGACAGCGGCTTT......................................... 22 1 1851.00 0.00 636.00 15.00 1197.00 3.00 ...................................................................TTGTGCGTGTGACAGCGGCTC.......................................... 21 1 1613.00 0.00 648.00 0.00 907.00 58.00 ..................................................................CTTGTGCGTGTGACAGCGG............................................. 19 1 1448.00 1.00 568.00 11.00 858.00 10.00 ...................................................................TTGTGCGTGTGACAGCGGCTATA........................................ 23 1 1236.00 0.00 542.00 8.00 630.00 56.00 ...................................................................TTGTGCGTGTGACAGCGGCTAC......................................... 22 1 1132.00 0.00 452.00 0.00 660.00 20.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATA........................................ 24 1 1032.00 0.00 391.00 8.00 446.00 187.00 ...................................................................TTGTGCGTGTGACAGCGGT............................................ 19 1 960.00 0.00 391.00 3.00 563.00 3.00 ..................................................................CTTGTGCGTGTGACCGCGGCT........................................... 21 1 865.00 0.00 209.00 1.00 650.00 5.00 ..................................................................CTTGTGCGTGTGACAGCGGCA........................................... 21 1 734.00 0.00 285.00 5.00 414.00 30.00 ...................................................................TTGTGCGTGTGACAGCGG............................................. 18 1 717.00 0.00 294.00 2.00 418.00 3.00 ..................................................................CTTGTGCGTGTGCCAGCGGCT........................................... 21 1 675.00 0.00 47.00 1.00 622.00 5.00 ..................................................................CTTGTGCGTGTGACCGCGGCTAT......................................... 23 1 673.00 0.00 182.00 3.00 488.00 0.00 ...................................................................TTGTGCGTGTGACAGCGTT............................................ 19 1 614.00 0.00 227.00 3.00 383.00 1.00 ...................................................................TTGTGCGTGTGCCAGCGGCTAT......................................... 22 1 571.00 0.00 97.00 0.00 473.00 1.00 ...................................................................TTGGGCGTGTGACAGCGGCTAT......................................... 22 1 563.00 0.00 123.00 0.00 440.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCG........................................... 20 1 561.00 0.00 19.00 0.00 30.00 512.00 ..................................................................CTTGTGCGTGTGCCAGCGGCTAT......................................... 23 1 518.00 0.00 43.00 2.00 473.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTAG......................................... 22 1 518.00 0.00 191.00 4.00 323.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGT............................................ 20 1 510.00 0.00 198.00 2.00 308.00 2.00 ..................................................................CTTGTGCGTGTGACAGCGTCT........................................... 21 1 478.00 0.00 90.00 0.00 388.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAG......................................... 23 1 469.00 0.00 177.00 1.00 286.00 5.00 ..................................................................CTTGTGCGTGTGTCAGCGGCT........................................... 21 1 454.00 0.00 97.00 0.00 351.00 6.00 ..................................................................CTTGTGCGTGTGACATCGGCT........................................... 21 1 397.00 0.00 89.00 0.00 166.00 142.00 ...................................................................TTGCGCGTGTGACAGCGGCTAT......................................... 22 1 391.00 0.00 138.00 3.00 250.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATC........................................ 24 1 387.00 0.00 125.00 0.00 246.00 16.00 ...................................................................TTGTGCGTGTGACAGCGGCTATC........................................ 23 1 374.00 0.00 136.00 0.00 233.00 5.00 ...................................................................TTGTGCGTGTGACAGCGTCTAT......................................... 22 1 374.00 0.00 96.00 1.00 277.00 0.00 ..................................................................CTTGTGCGTGTGACAGCTGCT........................................... 21 1 371.00 0.00 163.00 1.00 203.00 4.00 ..................................................................CTTGTGCGTGTGACAGCGTCTAT......................................... 23 1 360.00 0.00 73.00 0.00 285.00 2.00 ...................................................................TTGTGCGTGTGACAGCGGCTGT......................................... 22 1 335.00 0.00 68.00 0.00 267.00 0.00 ..................................................................CTTGGGCGTGTGACAGCGGCT........................................... 21 1 331.00 0.00 54.00 1.00 245.00 31.00 ...................................................................TTGTGCGTGTGACCGCGGCTAT......................................... 22 1 327.00 0.00 72.00 0.00 255.00 0.00 ..................................................................CTTGTGCGTGCGACAGCGGCT........................................... 21 1 327.00 0.00 88.00 1.00 183.00 55.00 ..................................................................CTTGTGCTTGTGACAGCGGCT........................................... 21 1 326.00 0.00 42.00 0.00 79.00 205.00 ...................................................................TTGTGCGTTTGACAGCGGCTAT......................................... 22 1 306.00 0.00 197.00 0.00 105.00 4.00 ...................................................................TTGTGCGTGTGCCAGCGGCT........................................... 20 1 305.00 0.00 42.00 0.00 234.00 29.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATTT....................................... 25 1 303.00 0.00 86.00 4.00 210.00 3.00 ..................................................................CTTGTGCGTGTGACAGCGGCTTTT........................................ 24 1 293.00 0.00 86.00 2.00 197.00 8.00 ...................................................................TTGGGCGTGTGACAGCGGCT........................................... 20 1 291.00 0.00 48.00 1.00 236.00 6.00 ..................................................................CTTGTGCGTGTGACAGCGGTT........................................... 21 1 291.00 0.00 85.00 0.00 199.00 7.00 ..................................................................CTTGTGCGCGTGACAGCGGCT........................................... 21 1 286.00 0.00 37.00 1.00 135.00 113.00 ..................................................................CTTGTGCGTTTGACAGCGGCT........................................... 21 1 282.00 0.00 38.00 0.00 95.00 149.00 ..................................................................CTTGTGCGTGTGACAGCGGCTG.......................................... 22 1 281.00 0.00 51.00 0.00 123.00 107.00 ..................................................................CTTGTGCGTGTGACAGAGGCT........................................... 21 1 274.00 0.00 52.00 0.00 203.00 19.00 ..................................................................CTTGGGCGTGTGACAGCGGCTAT......................................... 23 1 271.00 0.00 33.00 0.00 236.00 2.00 ..................................................................CTTGTGCGTGTGGCAGCGGCT........................................... 21 1 271.00 0.00 70.00 2.00 136.00 63.00 ...................................................................TTGTGCGTGTGACAGCGGCTATTT....................................... 24 1 269.00 0.00 93.00 2.00 174.00 0.00 ..................................................................CTTGTGCGTGTGACAGCTGCTAT......................................... 23 1 267.00 0.00 126.00 1.00 139.00 1.00 ..................................................................CTTGTGCGTGTGACAGCGGCTGT......................................... 23 1 265.00 0.00 59.00 0.00 206.00 0.00 ..................................................................CTTGTGCGTGTGACGGCGGCT........................................... 21 1 263.00 0.00 51.00 0.00 164.00 48.00 ..................................................................CTTGTGCGTGTGACCGCGGCTA.......................................... 22 1 262.00 0.00 76.00 0.00 185.00 1.00 ..................................................................CTTGCGCGTGTGACAGCGGCT........................................... 21 1 259.00 0.00 40.00 2.00 183.00 34.00 ..................................................................CTTGTGCGTGTGTCAGCGGCTAT......................................... 23 1 256.00 0.00 57.00 0.00 199.00 0.00 ..................................................................CTTGTGCGTGGGACAGCGGCT........................................... 21 1 252.00 0.00 63.00 0.00 177.00 12.00 ...................................................................TTGTGCGTGTGACAGCGGTT........................................... 20 1 251.00 0.00 88.00 0.00 161.00 2.00 ..................................................................CTTGTGCGTGCGACAGCGGCTAT......................................... 23 1 248.00 0.00 76.00 0.00 171.00 1.00 ...................................................................TTGTGCGTGCGACAGCGGCTAT......................................... 22 1 244.00 0.00 75.00 1.00 168.00 0.00 ...................................................................TTGTGCGTGTGCCAGCGGCTA.......................................... 21 1 243.00 0.00 38.00 0.00 191.00 14.00 ...................................................................TTGCGCGTGTGACAGCGGCT........................................... 20 1 240.00 0.00 74.00 2.00 155.00 9.00 ...................................................................TTGTGCGTGTGACATCGGCTAT......................................... 22 1 233.00 0.00 87.00 0.00 140.00 6.00 ..................................................................ATTGTGCGTGTGACAGCGGCT........................................... 21 1 232.00 0.00 49.00 0.00 181.00 2.00 ..................................................................CTTGTGCGTGTGACAGAGGCTAT......................................... 23 1 231.00 0.00 59.00 0.00 172.00 0.00 ..................................................................CTTGTGCGTGTTACAGCGGCT........................................... 21 1 231.00 0.00 64.00 0.00 150.00 17.00 ...................................................................TTGTGCGTTTGACAGCGGCT........................................... 20 1 223.00 0.00 103.00 0.00 58.00 62.00 ...................................................................TTGGGCGTGTGACAGCGGCTA.......................................... 21 1 212.00 0.00 40.00 1.00 165.00 6.00 ..................................................................CTTGTGAGTGTGACAGCGGCT........................................... 21 1 207.00 0.00 35.00 0.00 134.00 38.00 ..................................................................CTTGTGCGTGTGACATCGGCTAT......................................... 23 1 204.00 0.00 83.00 0.00 115.00 6.00 ...................................................................TTGTGCGTGTGACAGCGGCTG.......................................... 21 1 203.00 0.00 42.00 0.00 107.00 54.00 ..................................................................CTTGTGCGTGGGACAGCGGCTAT......................................... 23 1 202.00 0.00 49.00 0.00 152.00 1.00 ...................................................................TTGTGCGTGTGACAGCGGCTATG........................................ 23 1 202.00 0.00 44.00 0.00 79.00 79.00 ..................................................................CTTGTGCGTGTGAAAGCGGCT........................................... 21 1 200.00 0.00 59.00 0.00 133.00 8.00 ...................................................................TTGTGCGTGTGACAGCTGCTAT......................................... 22 1 198.00 0.00 84.00 0.00 114.00 0.00 ...................................................................TTGTGCGTGTGACAGAGGCTAT......................................... 22 1 195.00 0.00 57.00 0.00 138.00 0.00 ..................................................................CTTGTGCGCGTGACAGCGGCTAT......................................... 23 1 194.00 0.00 65.00 1.00 125.00 3.00 ..................................................................CTTGTGCGTGTGCCAGCGGCTA.......................................... 22 1 193.00 0.00 19.00 1.00 172.00 1.00 ...................................................................TTGTGCGTGTGGCAGCGGCTAT......................................... 22 1 192.00 0.00 66.00 0.00 126.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTAAA........................................ 23 1 185.00 0.00 63.00 2.00 118.00 2.00 ...................................................................TTGTGCGTGGGACAGCGGCTAT......................................... 22 1 185.00 0.00 46.00 1.00 138.00 0.00 ...................................................................TTGTGCGTGTGACAGCGT............................................. 18 1 184.00 0.00 79.00 0.00 104.00 1.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4690:8350125-8350254 +	92.4	CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGCCAGCCATTGTTCCATC CCACGTCGCGAACCAAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAACCAGCCATCGTCCCACA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ...................................................................TTGTGCGTGTGACAGCGGCTAT......................................... 22 1 176408.00 37.00 44777.00 0.00 131594.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAT......................................... 23 1 170345.00 18.00 34656.00 0.00 135671.00 ..................................................................CTTGTGCGTGTGACAGCGGCT........................................... 21 1 142182.00 18.00 34168.00 0.00 107996.00 ...................................................................TTGTGCGTGTGACAGCGGCTA.......................................... 21 1 58866.00 5.00 14750.00 0.00 44111.00 ...................................................................TTGTGCGTGTGACAGCGGCT........................................... 20 1 58178.00 8.00 13690.00 0.00 44480.00 ..................................................................CTTGTGCGTGTGACAGCGGCTA.......................................... 22 1 54588.00 5.00 11553.00 0.00 43030.00 ..................................................................CTTGTGCGTGTGACAGCGGC............................................ 20 1 43186.00 3.00 5883.00 0.00 37300.00 ...................................................................TTGTGCGTGTGACAGCGGC............................................ 19 1 24840.00 1.00 3207.00 0.00 21632.00 ..................................................................CTTGTGCGTGTGACAGCGGCTT.......................................... 22 1 7814.00 1.00 1614.00 0.00 6199.00 ..................................................................CTTGTGCGTGTGACAGCGG............................................. 19 1 7656.00 0.00 672.00 0.00 6984.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATT........................................ 24 1 7296.00 0.00 975.00 0.00 6321.00 ...................................................................TTGTGCGTGTGACAGCGGCTATT........................................ 23 1 6851.00 0.00 1245.00 0.00 5606.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAA......................................... 23 1 4911.00 1.00 772.00 0.00 4138.00 ...................................................................TTGTGCGTGTGACAGCGG............................................. 18 1 4279.00 0.00 252.00 0.00 4027.00 ...................................................................TTGTGCGTGTGACAGCGGCTT.......................................... 21 1 4132.00 1.00 902.00 0.00 3229.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAC......................................... 23 1 3700.00 4.00 597.00 0.00 3099.00 ...................................................................TTGTGCGTGTGACAGCGGT............................................ 19 1 3240.00 1.00 600.00 0.00 2639.00 ...................................................................TTGTGCGTGTGACAGCGGCTAA......................................... 22 1 2973.00 1.00 713.00 0.00 2259.00 ...................................................................TTGTGCGTGTGACAGCGGCTATA........................................ 23 1 2500.00 0.00 470.00 0.00 2030.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAG......................................... 23 1 2440.00 0.00 233.00 0.00 2207.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATA........................................ 24 1 2397.00 2.00 360.00 0.00 2035.00 ...................................................................TTGTGCGTGTGACAGCGTT............................................ 19 1 2366.00 0.00 355.00 0.00 2011.00 ...................................................................TTGTGCGTGTGACAGCGGCTAG......................................... 22 1 2210.00 1.00 321.00 0.00 1888.00 ..................................................................CTTGTGCGTGTGACAGCGGCA........................................... 21 1 2121.00 0.00 314.00 0.00 1807.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATTT....................................... 25 1 1520.00 0.00 183.00 0.00 1337.00 ...................................................................TTGTGCGTGTGACAGCTGCTAT......................................... 22 1 1511.00 0.00 108.00 0.00 1403.00 ..................................................................CTTGTGCGTGTGACAGCTGCT........................................... 21 1 1446.00 0.00 82.00 0.00 1364.00 ..................................................................CTTGTGCGTGTGACAGCG.............................................. 18 1 1411.00 0.00 86.00 0.00 1325.00 ..................................................................CTTGTGCGTGTGACAGCTGCTAT......................................... 23 1 1392.00 1.00 82.00 0.00 1309.00 ..................................................................ATTGTGCGTGTGACAGCGGCTAT......................................... 23 1 1372.00 0.00 22.00 0.00 1350.00 ...................................................................TTGTGCGTGTGACAGCGGCTATTT....................................... 24 1 1264.00 0.00 166.00 0.00 1098.00 ...................................................................TTGTGCGTGTGACAGCGGTT........................................... 20 1 1224.00 0.00 269.00 0.00 955.00 ..................................................................CTTGTGCGTGTGACAGCGGT............................................ 20 1 1222.00 0.00 233.00 0.00 989.00 ...................................................................TTGTGCGTGTGACAGCGGTTT.......................................... 21 1 1201.00 0.00 127.00 0.00 1074.00 ..................................................................CTTGTGCGTGTGACAGCGGCTTT......................................... 23 1 1156.00 0.00 281.00 0.00 875.00 ..................................................................ATTGTGCGTGTGACAGCGGCT........................................... 21 1 1148.00 0.00 28.00 0.00 1120.00 ..................................................................CTTGTGCGTGTTACAGCGGCTAT......................................... 23 1 1080.00 1.00 47.00 0.00 1032.00 ...................................................................TTGTGCGTGTGACAGCGGCTATG........................................ 23 1 1057.00 0.00 90.00 0.00 967.00 ...................................................................TTGTGCGTGTTACAGCGGCTAT......................................... 22 1 1054.00 0.00 73.00 0.00 981.00 ..................................................................CTTGTGCGTGTTACAGCGGCT........................................... 21 1 975.00 0.00 58.00 0.00 917.00 ..............................AGCTGCTGGCCACTGCACAAGA.............................................................................. 22 1 952.00 0.00 67.00 0.00 885.00 ...................................................................TTGTGCGTGTGACATCGGCTAT......................................... 22 1 924.00 0.00 143.00 0.00 781.00 ..................................................................CTTGTGCGTGTGACAGCGGCTCT......................................... 23 1 900.00 0.00 754.00 0.00 146.00 ..................................................................CTTGTGCGTGTGACATCGGCTAT......................................... 23 1 899.00 0.00 90.00 0.00 809.00 ...................................................................TTGTGCGTGTGACAGCGGCTAC......................................... 22 1 897.00 3.00 359.00 0.00 535.00 ...................................................................TTGTGCGTGTGACAGCGGCTCT......................................... 22 1 885.00 0.00 769.00 0.00 116.00 ...................................................................TTGTGCGTGTGACAGCGGCTTT......................................... 22 1 876.00 0.00 288.00 0.00 588.00 ..................................................................CTTGTGCGTGTGACAGCGTT............................................ 20 1 832.00 0.00 132.00 0.00 700.00 ...................................................................TTGTGCGTGTGACAGCGGATAT......................................... 22 1 819.00 0.00 52.00 0.00 767.00 ..................................................................CTTGTGCGTGTGACAGCGGATAT......................................... 23 1 801.00 0.00 20.00 0.00 781.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATG........................................ 24 1 800.00 0.00 68.00 0.00 732.00 ...................................................................TTGTGCGTGTGACAGCGTCTAT......................................... 22 1 795.00 0.00 172.00 0.00 623.00 ..................................................................CTTGTGCGTGTGACAGCGTCTAT......................................... 23 1 741.00 0.00 144.00 0.00 597.00 ..................................................................CTTGTGCGTGTGACATCGGCT........................................... 21 1 739.00 0.00 98.00 0.00 641.00 ..................................................................CTTGTGCGTGTGACAGCGTCT........................................... 21 1 734.00 1.00 173.00 0.00 560.00 ..................................................................CTTGTGCGTGTGACAGCGGAT........................................... 21 1 727.00 0.00 68.00 0.00 659.00 ...................................................................TTGTGCGTGTGACAGAGGCTAT......................................... 22 1 661.00 0.00 76.00 0.00 585.00 ...................................................................TTGTGCGTGTGACAGCTGCT........................................... 20 1 654.00 1.00 35.00 0.00 618.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATAA....................................... 25 1 644.00 0.00 61.00 0.00 583.00 ..................................................................CTTGTGCGTGTGACAGAGGCTAT......................................... 23 1 641.00 0.00 62.00 0.00 579.00 ...................................................................TTGTGCGTGTGACAGCGGCA........................................... 20 1 629.00 1.00 96.00 0.00 532.00 ..................................................................CTTGTGCGTGTGACAGCGGCTC.......................................... 22 1 606.00 0.00 508.00 0.00 98.00 ..................................................................CTTGTGCGTGTGACAGCTGC............................................ 20 1 568.00 0.00 26.00 0.00 542.00 ...................................................................TTGTGAGTGTGACAGCGGCTAT......................................... 22 1 564.00 0.00 20.00 0.00 544.00 ..................................................................CTTGTGAGTGTGACAGCGGCTAT......................................... 23 1 541.00 0.00 25.00 0.00 516.00 ..................................................................CTTGTTCGTGTGACAGCGGCTAT......................................... 23 1 526.00 0.00 16.00 0.00 510.00 ..................................................................CTTGTTCGTGTGACAGCGGCT........................................... 21 1 510.00 0.00 24.00 0.00 486.00 ...................................................................TTGTTCGTGTGACAGCGGCTAT......................................... 22 1 500.00 0.00 13.00 0.00 487.00 ..................................................................CTTGTGAGTGTGACAGCGGCT........................................... 21 1 492.00 0.00 39.00 0.00 453.00 ..................................................................CTTGTGCGTGTGACAGAGGCT........................................... 21 1 467.00 0.00 81.00 0.00 386.00 ...................................................................TTGTGCGTGTGACAGCGTA............................................ 19 1 456.00 0.00 29.00 0.00 427.00 ...................................................................TTGTGCGTGTGACAGCTGCTA.......................................... 21 1 454.00 0.00 36.00 0.00 418.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAAA........................................ 24 1 449.00 0.00 53.00 0.00 396.00 ...................................................................TTGTGCGTGTGACAGCGGCTC.......................................... 21 1 439.00 0.00 365.00 0.00 74.00 ..............................AGCTGCTGGCCACTGCACAAGAT............................................................................. 23 1 438.00 3.00 42.00 0.00 393.00 ...................................................................TTGCGCGTGTGACAGCGGCTAT......................................... 22 1 434.00 0.00 122.00 0.00 312.00 ..................................................................ATTGTGCGTGTGACAGCGGCTA.......................................... 22 1 421.00 0.00 6.00 0.00 415.00 ..................................................................CTTGTGCGTGTGACAGCGGCTG.......................................... 22 1 418.00 0.00 68.00 0.00 350.00 ...................................................................TTGTGCGTGTGACAGCAGCTAT......................................... 22 1 407.00 0.00 120.00 0.00 287.00 ...................................................................TTGTGCGTGTTACAGCGGCT........................................... 20 1 398.00 0.00 18.00 0.00 380.00 ..................................................................CTTGTGCGTGTGACAGCTGCTA.......................................... 22 1 397.00 0.00 25.00 0.00 372.00 ...................................................................TTGTGCGTTTGACAGCGGCTAT......................................... 22 1 395.00 0.00 98.00 0.00 297.00 ..................................................................ATTGTGCGTGTGACAGCGGC............................................ 20 1 378.00 0.00 4.00 0.00 374.00 ...................................................................TTGTGCTTGTGACAGCGGCTAT......................................... 22 1 370.00 0.00 23.00 0.00 347.00 ...................................................................TTGTGCGTGTTACAGCGGCTA.......................................... 21 1 370.00 0.00 23.00 0.00 347.00 ...................................................................TTGTGCGTGTGACATCGGCT........................................... 20 1 369.00 0.00 54.00 0.00 315.00 ...................................................................TTGTGCGTGTGACAGCGGCTAAA........................................ 23 1 357.00 0.00 58.00 0.00 299.00 ..................................................................CTTGTGCGTGTGACAGCAGCTAT......................................... 23 1 357.00 0.00 81.00 0.00 276.00 ..................................................................CTTGTGCTTGTGACAGCGGCTAT......................................... 23 1 355.00 0.00 30.00 0.00 325.00 ...................................................................TTGTGCGTGTGACAGTGGCTAT......................................... 22 1 349.00 0.00 24.00 0.00 325.00 ...................................................................TTGTGCGTGTGACAGCGGCTATC........................................ 23 1 348.00 2.00 175.00 0.00 171.00 ..................................................................CTTGTGCGTGTTACAGCGGCTA.......................................... 22 1 348.00 0.00 15.00 0.00 333.00 ..................................................................CTTGTGCGTGCGACAGCGGCTAT......................................... 23 1 347.00 1.00 51.00 0.00 295.00 ...................................................................TTGTGCGTGCGACAGCGGCTAT......................................... 22 1 344.00 0.00 65.00 0.00 279.00 ...................................................................TTGTGCGTGTGACAGCGTCT........................................... 20 1 344.00 0.00 61.00 0.00 283.00 ..................................................................CTTGTGCGTGTGACAGCGGTT........................................... 21 1 341.00 0.00 82.00 0.00 259.00 ...................................................................TTGTGCGTGTGACAGCGGCTATAA....................................... 24 1 338.00 0.00 44.00 0.00 294.00 ..................................................................CTTGTGCGTGTGAAAGCGGCTAT......................................... 23 1 333.00 0.00 32.00 0.00 301.00 ...................................................................TTGTGCGTGTGACAGCGTCTA.......................................... 21 1 333.00 0.00 55.00 0.00 278.00 ...................................................................TTGTGCGCGTGACAGCGGCTAT......................................... 22 1 332.00 0.00 58.00 0.00 274.00 ..................................................................CTTGTGCGTGTGACAGCGGA............................................ 20 1 328.00 0.00 38.00 0.00 290.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000453872:332227-332411 -	43.38	CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAAC-------------------------------------------------------AGCCAGCCATTGTTCCATC GTGCGTCGCTCGCCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGAACAGCACAGAACTGAACAAAACAAATCCAGGCAGCCAGTCAGCCAGCCAGCCAGCCAGCCAGCAGCCCATC Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000408176:660268-660428 -	58.27	CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG-------------------------------CCAGCCATTGTTCCATC CTGCGTCGCGAACCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGAATAGAACCAAAAACGAGAACCAGCAGCCAACCAATCATCATCCAATA Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000301760:580720-580858 -	76.85	CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAAC-------------AGCCAGCCATTGTTCCATC CTGCGCCGCGAGCCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGAGGCAGCCAGCAGCCAGCCAT----CCAAT Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415843:453822-453975 -	65.31	CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG-----------------CCAGCCATT-------GTTCCATC CTGCGTCGCGAACCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGAACGGAACGGAACCGAATCATCCAATAATCGAGGCTCCATC Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000491193:230657-230827 +	52.09	CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG-----------------------------------------CCAGCCATTGTTCCATC CTGCGTCGCGAACCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGATTAACCAGCACCACAAGCACCAAAAGCACCAAAAGCAGCAGCAGCCATCATCCAATA Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000779986:493851-494009 -	59.74	CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGCC-----------------------------AGCCATTGTTCCATC CTGCGTCGCGAACCGAAAGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGACTAACCAACAGCAGCAGAAGCAGCAGCAGCCGCCATCATCCAATA Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000302696:1725488-1725608 +	77.08	CCACGTCCGGA----ACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGCCAGCCATTGTTCCATC ---------GACTCTATAAAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACT--AAGTCATCATGCCG-- Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13335:1603991-1604112 -	75.09	CCACGTCCGGAACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAAC----------------AGCCAGCCATTGTTCCATC GC--GT--------TAACGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACCAATCAACTGACCACCAG--------------ATC Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ..................................................................CTTGTGCGTGTGACAGCGGCT........................................................... 21 1 106537.00 4180.00 61601.00 40754.00 2.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAT......................................................... 23 1 83040.00 1551.00 62234.00 19250.00 5.00 ...................................................................TTGTGCGTGTGACAGCGGCTAT......................................................... 22 1 46759.00 1839.00 19989.00 24925.00 6.00 ..................................................................CTTGTGCGTGTGACAGCGGCTA.......................................................... 22 1 29868.00 572.00 21928.00 7367.00 1.00 ...................................................................TTGTGCGTGTGACAGCGGCT........................................................... 20 1 20789.00 1692.00 6521.00 12573.00 3.00 ...................................................................TTGTGCGTGTGACAGCGGCTA.......................................................... 21 1 19236.00 819.00 7720.00 10697.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGC............................................................ 20 1 19235.00 698.00 12526.00 6009.00 2.00 ..................................................................CTTGTGCGTGTGACAGCGGCTT.......................................................... 22 1 10093.00 415.00 5957.00 3720.00 1.00 ...................................................................TTGTGCGTGTGACAGCGGC............................................................ 19 1 5759.00 326.00 2076.00 3356.00 1.00 ..................................................................CTTGTGCGTGTGACAGCGG............................................................. 19 1 5295.00 259.00 2803.00 2233.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATT........................................................ 24 1 4310.00 108.00 3403.00 799.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTATT........................................................ 23 1 3236.00 174.00 1559.00 1503.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTT.......................................................... 21 1 3025.00 214.00 922.00 1889.00 0.00 ...................................................................TTGTGCGTGTGACAGCGG............................................................. 18 1 2484.00 25.00 594.00 1865.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGT............................................................ 19 1 2238.00 162.00 515.00 1561.00 0.00 ...................................................................TTGTGCGTGTGACAGCGTT............................................................ 19 1 2181.00 166.00 547.00 1468.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTTT......................................................... 23 1 2000.00 84.00 1145.00 771.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCA........................................................... 21 1 1460.00 67.00 1130.00 263.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGT............................................................ 20 1 1448.00 68.00 699.00 681.00 0.00 ..................................................................CTTGTGCGTGTGACATCGGCT........................................................... 21 1 1443.00 54.00 1306.00 83.00 0.00 ..................................................................CTTGTGCGTGTGACATCGGCTAT......................................................... 23 1 1434.00 16.00 1385.00 33.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTAG......................................................... 22 1 1398.00 32.00 748.00 618.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAA......................................................... 23 1 1392.00 23.00 998.00 371.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAG......................................................... 23 1 1266.00 9.00 1006.00 251.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTTT......................................................... 22 1 1077.00 81.00 310.00 686.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATTT....................................................... 25 1 964.00 22.00 794.00 148.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTAC......................................................... 23 1 856.00 13.00 386.00 456.00 1.00 ..................................................................CTTGTGCGTGTGACAGCGGCTC.......................................................... 22 1 854.00 4.00 72.00 777.00 1.00 ...................................................................TTGTGCGTGTGACAGCGGCTAA......................................................... 22 1 817.00 31.00 337.00 449.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATA........................................................ 24 1 809.00 9.00 662.00 138.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGAT........................................................... 21 1 784.00 26.00 692.00 66.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTATTT....................................................... 24 1 728.00 35.00 399.00 294.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGATAT......................................................... 23 1 717.00 10.00 684.00 23.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTATA........................................................ 23 1 696.00 39.00 380.00 277.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTATG........................................................ 23 1 653.00 10.00 501.00 142.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGTCT........................................................... 21 1 651.00 22.00 526.00 103.00 0.00 ..................................................................CTTGTTCGTGTGACAGCGGCT........................................................... 21 1 639.00 21.00 594.00 24.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTG.......................................................... 22 1 622.00 15.00 409.00 198.00 0.00 ..................................................................CTTGTTCGTGTGACAGCGGCTAT......................................................... 23 1 621.00 8.00 605.00 8.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGTT........................................................... 21 1 605.00 26.00 268.00 311.00 0.00 ..................................................................CTGGTGCGTGTGACAGCGGCT........................................................... 21 1 588.00 0.00 465.00 123.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGTT........................................................... 20 1 583.00 34.00 120.00 429.00 0.00 ..................................................................CTTGTGCGTGTGACAGCG.............................................................. 18 1 548.00 8.00 318.00 222.00 0.00 ..................................................................ATTGTGCGTGTGACAGCGGCT........................................................... 21 1 542.00 4.00 265.00 273.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATG........................................................ 24 1 536.00 8.00 478.00 50.00 0.00 ...................................................................TTGTGCGTGTGACATCGGCTAT......................................................... 22 1 536.00 32.00 468.00 36.00 0.00 ..................................................................CTGGTGCGTGTGACAGCGGCTAT......................................................... 23 1 507.00 0.00 471.00 36.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTAC......................................................... 22 1 499.00 5.00 51.00 442.00 1.00 ..................................................................CTTGTGCGTGTGACATCGGCTA.......................................................... 22 1 457.00 6.00 435.00 16.00 0.00 ...................................................................TTGTGCGTGTGACAGCGT............................................................. 18 1 456.00 0.00 60.00 395.00 1.00 ..................................................................CTTGTGCGTGTGACAGCGGCTTTT........................................................ 24 1 418.00 21.00 264.00 133.00 0.00 ..................................................................CTTGTGCGTGTGACAGAGGCT........................................................... 21 1 406.00 15.00 248.00 143.00 0.00 ..................................................................ATTGTGCGTGTGACAGCGGCTAT......................................................... 23 1 401.00 6.00 284.00 111.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGTCTAT......................................................... 23 1 395.00 4.00 351.00 40.00 0.00 ..................................................................CTTGTGCGTGTGACAGCTGCT........................................................... 21 1 390.00 10.00 328.00 52.00 0.00 ...................................................................TTGTGCGTGTGACAGCGTA............................................................ 19 1 388.00 22.00 164.00 202.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTCT......................................................... 23 1 355.00 1.00 32.00 322.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGTT............................................................ 20 1 353.00 15.00 178.00 160.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTCT......................................................... 22 1 350.00 12.00 63.00 275.00 0.00 ..................................................................CTTGGGCGTGTGACAGCGGCT........................................................... 21 1 341.00 3.00 2.00 336.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGATAT......................................................... 22 1 339.00 9.00 274.00 56.00 0.00 ..................................................................CTTGTGCGTGTGACAGAGGCTAT......................................................... 23 1 322.00 3.00 259.00 60.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTC.......................................................... 21 1 320.00 6.00 36.00 277.00 1.00 ..................................................................CTTGTGCGTGTGACAGCGGCG........................................................... 21 1 310.00 30.00 135.00 145.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTG.......................................................... 21 1 309.00 17.00 143.00 149.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTTG......................................................... 22 1 306.00 5.00 168.00 133.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGA............................................................ 20 1 302.00 9.00 206.00 87.00 0.00 ..................................................................CTTGTGCGTGTGACAGCTGCTAT......................................................... 23 1 297.00 1.00 273.00 23.00 0.00 ...................................................................TTGGGCGTGTGACAGCGGCTAT......................................................... 22 1 297.00 5.00 5.00 287.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTATAA....................................................... 25 1 296.00 3.00 264.00 29.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGATA.......................................................... 22 1 296.00 2.00 280.00 14.00 0.00 ..................................................................CTTGTGCGTGTGACATCGGC............................................................ 20 1 291.00 16.00 250.00 25.00 0.00 ..................................................................CTTGTGAGTGTGACAGCGGCT........................................................... 21 1 289.00 11.00 124.00 154.00 0.00 ..................................................................TTTGTGCGTGTGACAGCGGCT........................................................... 21 1 286.00 1.00 60.00 225.00 0.00 ..................................................................CTTGCGCGTGTGACAGCGGCT........................................................... 21 1 286.00 2.00 78.00 206.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGTTT.......................................................... 21 1 285.00 15.00 134.00 136.00 0.00 ..................................................................CTTGTGCGTGCGACAGCGGCT........................................................... 21 1 280.00 12.00 90.00 178.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCC........................................................... 21 1 280.00 24.00 157.00 99.00 0.00 ..............................AGCTGCTGGCCACTGCACAAGAT............................................................................................. 23 1 275.00 1.00 261.00 12.00 1.00 ..................................................................CTTGTGCGTGTGACAGCGGTTT.......................................................... 22 1 263.00 6.00 193.00 64.00 0.00 ...................................................................TTGTTCGTGTGACAGCGGCTAT......................................................... 22 1 262.00 9.00 240.00 13.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCAAT......................................................... 23 1 254.00 13.00 240.00 1.00 0.00 ..................................................................CTTGTGCGCGTGACAGCGGCT........................................................... 21 1 249.00 5.00 126.00 118.00 0.00 ..............................AGCTGCTGGCCACTGCACAAGA.............................................................................................. 22 1 231.00 1.00 212.00 18.00 0.00 ...................................................................TTGCGCGTGTGACAGCGGCTAT......................................................... 22 1 226.00 5.00 29.00 192.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGA............................................................ 19 1 225.00 22.00 70.00 133.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGCCT........................................................... 21 1 223.00 4.00 43.00 176.00 0.00 ...................................................................TTGTGCGTGTGACAGCGTG............................................................ 19 1 222.00 18.00 44.00 160.00 0.00 ...................................................................TTGTGCGTGTGACATCGGCTA.......................................................... 21 1 221.00 11.00 188.00 22.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCTTG......................................................... 23 1 218.00 8.00 124.00 86.00 0.00 ..................................................................CTTGTTCGTGTGACAGCGGCTA.......................................................... 22 1 216.00 2.00 210.00 4.00 0.00 ...................................................................TTGTGCGTGTGACAGCGGCTGT......................................................... 22 1 213.00 9.00 56.00 147.00 1.00 ...................................................................TTGTGCGTGTGACAGAGGCTAT......................................................... 22 1 209.00 17.00 102.00 90.00 0.00 ...................................................................TTGTGCGTGTGACAGCG.............................................................. 17 1 206.00 0.00 0.00 206.00 0.00 ..................................................................CTTGTGCGTGCGACAGCGGCTAT......................................................... 23 1 201.00 8.00 105.00 88.00 0.00 ..................................................................CTTGTGCGTGTGGCAGCGGCT........................................................... 21 1 198.00 8.00 110.00 80.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGT............................................................. 19 1 197.00 11.00 93.00 93.00 0.00 ..................................................................CTTGTGCGCGTGACAGCGGCTAT......................................................... 23 1 193.00 4.00 116.00 73.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCCAT......................................................... 23 1 192.00 9.00 166.00 17.00 0.00 ..................................................................CTTGTGCGTGTGACAGCGGCGAT......................................................... 23 1 189.00 12.00 161.00 16.00 0.00 ..................................................................CTTGTGCGTGTGACACCGGCT........................................................... 21 1 188.00 10.00 50.00 128.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000395454:64412-64524 +	78.12	CCACGTCCGGAACCG----------------AAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGCCAGCCATTGTTCCATC --------------GTGTTTCAACGAGCGTTAACGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAAC------------------- Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chrXL_group3a:1970441-1970623 -	41.28	CCACGTCCGGA-----ACCGAAAGGTGCTTATTGCAGCTGCTGGCCACTGCACAAGATTAGACTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG-------CCAGCCA-----------------------------------------TTGTTCCA---TC ATATGT---GATTTAGCTCGATCGGTACTTATTGCAGCTGCTGGCCACTGCACAAGATTAGATTTAAGACTCTTGTGCGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAAACTAAACAAACCAAAAAGGAAGTTGAACGCCTAATGCAATCGATGAGTGTTGGGTTGCTTCAGTTTC Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body .......................................................................CTTGTGCGTGTGACAGCGGCTAT............................................................................................ 23 1 54444.00 879.00 23.00 53540.00 2.00 .......................................................................CTTGTGCGTGTGACAGCGGCT.............................................................................................. 21 1 48122.00 855.00 8.00 47126.00 133.00 ........................................................................TTGTGCGTGTGACAGCGGCTAT............................................................................................ 22 1 42966.00 501.00 25.00 42440.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCT.............................................................................................. 20 1 23117.00 516.00 8.00 22555.00 38.00 .......................................................................CTTGTGCGTGTGACAGCGGCTA............................................................................................. 22 1 19049.00 288.00 6.00 18739.00 16.00 ........................................................................TTGTGCGTGTGACAGCGGCTA............................................................................................. 21 1 18347.00 306.00 7.00 18029.00 5.00 ........................................................................TTGTGCGTGTGACAGCGGC............................................................................................... 19 1 15793.00 418.00 0.00 15366.00 9.00 .......................................................................CTTGTGCGTGTGACAGCGGC............................................................................................... 20 1 4535.00 116.00 5.00 4411.00 3.00 .......................................................................CTTGTGCGTGTGACAGCGGCTT............................................................................................. 22 1 3268.00 62.00 1.00 3201.00 4.00 .......................................................................CTTGTGCGTGTGACAGCGG................................................................................................ 19 1 2340.00 74.00 0.00 2266.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCTT............................................................................................. 21 1 2154.00 61.00 0.00 2093.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGT............................................................................................... 19 1 2060.00 57.00 0.00 2003.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTATT........................................................................................... 24 1 1904.00 37.00 0.00 1867.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCTATT........................................................................................... 23 1 1654.00 23.00 0.00 1631.00 0.00 ........................................................................TTGTGCGTGTGACAGCGG................................................................................................ 18 1 1554.00 5.00 0.00 1549.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTAA............................................................................................ 23 1 1083.00 16.00 0.00 1065.00 2.00 .......................................................................CTTGTGCGTGTGACAGCGGCTAC............................................................................................ 23 1 886.00 9.00 1.00 876.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCTAA............................................................................................ 22 1 640.00 10.00 0.00 630.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTTT............................................................................................ 23 1 628.00 7.00 1.00 620.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCTATA........................................................................................... 23 1 552.00 7.00 0.00 545.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTATA........................................................................................... 24 1 545.00 8.00 1.00 536.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGT............................................................................................... 20 1 487.00 9.00 0.00 478.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCTTT............................................................................................ 22 1 486.00 5.00 0.00 481.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTCT............................................................................................ 23 1 484.00 2.00 0.00 482.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCA.............................................................................................. 21 1 370.00 8.00 0.00 362.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTC............................................................................................. 22 1 308.00 2.00 0.00 306.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCTAC............................................................................................ 22 1 307.00 3.00 0.00 304.00 0.00 ........................................................................TTGTGCGTGTGACAGCGTT............................................................................................... 19 1 267.00 6.00 0.00 261.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGA............................................................................................... 19 1 249.00 6.00 0.00 243.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCTCT............................................................................................ 22 1 234.00 1.00 0.00 233.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTATTT.......................................................................................... 25 1 193.00 6.00 1.00 186.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGTT.............................................................................................. 20 1 191.00 5.00 0.00 186.00 0.00 .......................................................................TTTGTGCGTGTGACAGCGGCTAT............................................................................................ 23 1 187.00 1.00 0.00 186.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCTATTT.......................................................................................... 24 1 186.00 9.00 0.00 177.00 0.00 .......................................................................ATTGTGCGTGTGACAGCGGCTAT............................................................................................ 23 1 183.00 1.00 0.00 182.00 0.00 .......................................................................ATTGTGCGTGTGACAGCGGCT.............................................................................................. 21 1 177.00 0.00 0.00 177.00 0.00 .......................................................................CTAGTGCGTGTGACAGCGGCTAT............................................................................................ 23 1 176.00 0.00 0.00 176.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCTAG............................................................................................ 22 1 169.00 1.00 0.00 168.00 0.00 ........................................................................TTATGCGTGTGACAGCGGCTAT............................................................................................ 22 1 160.00 1.00 0.00 159.00 0.00 .......................................................................CTAGTGCGTGTGACAGCGGCT.............................................................................................. 21 1 158.00 0.00 0.00 158.00 0.00 .......................................................................CTTGTGCGTGTGACAGCG................................................................................................. 18 1 154.00 1.00 0.00 153.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCTC............................................................................................. 21 1 153.00 0.00 1.00 152.00 0.00 ........................................................................TTGTGCGTGTGACAGCGT................................................................................................ 18 1 153.00 0.00 0.00 153.00 0.00 .......................................................................TTTGTGCGTGTGACAGCGGCT.............................................................................................. 21 1 148.00 2.00 0.00 146.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTACC........................................................................................... 24 1 145.00 2.00 2.00 141.00 0.00 ........................................................................TTGGGCGTGTGACAGCGGCTAT............................................................................................ 22 1 143.00 0.00 0.00 143.00 0.00 .......................................................................CTCGTGCGTGTGACAGCGGCTAT............................................................................................ 23 1 139.00 1.00 0.00 138.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGTT.............................................................................................. 21 1 137.00 1.00 0.00 136.00 0.00 ........................................................................TTGCGCGTGTGACAGCGGCTAT............................................................................................ 22 1 135.00 1.00 0.00 134.00 0.00 .......................................................................CTTGTGCGTGCGACAGCGGCTAT............................................................................................ 23 1 135.00 1.00 0.00 134.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCA.............................................................................................. 20 1 122.00 2.00 0.00 120.00 0.00 .......................................................................CTCGTGCGTGTGACAGCGGCT.............................................................................................. 21 1 120.00 0.00 0.00 120.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGT................................................................................................ 19 1 120.00 1.00 2.00 117.00 0.00 .......................................................................CTTGTGCGTGCGACAGCGGCT.............................................................................................. 21 1 116.00 0.00 0.00 116.00 0.00 .......................................................................CTTGTGCGTGTGACAGAGGCT.............................................................................................. 21 1 113.00 2.00 0.00 111.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTAG............................................................................................ 23 1 112.00 0.00 0.00 112.00 0.00 .......................................................................CTTGCGCGTGTGACAGCGGCTAT............................................................................................ 23 1 106.00 0.00 0.00 106.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTAAA........................................................................................... 24 1 105.00 3.00 0.00 102.00 0.00 .......................................................................CTTGTGCGTGTGCCAGCGGCTAT............................................................................................ 23 1 101.00 1.00 0.00 100.00 0.00 .......................................................................CTTGCGCGTGTGACAGCGGCT.............................................................................................. 21 1 100.00 0.00 0.00 100.00 0.00 .......................................................................CTTGTGCGTGTGACAGAGGCTAT............................................................................................ 23 1 98.00 0.00 0.00 98.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGA............................................................................................... 20 1 97.00 2.00 0.00 95.00 0.00 .......................................................................CTTGTGCGCGTGACAGCGGCTAT............................................................................................ 23 1 96.00 0.00 0.00 96.00 0.00 ........................................................................TTGTGCGTGCGACAGCGGCTAT............................................................................................ 22 1 96.00 1.00 0.00 95.00 0.00 .......................................................................CTGGTGCGTGTGACAGCGGCTAT............................................................................................ 23 1 94.00 0.00 0.00 94.00 0.00 .......................................................................CTTGTGCGTGTGCCAGCGGCT.............................................................................................. 21 1 94.00 0.00 0.00 94.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTATAA.......................................................................................... 25 1 93.00 3.00 0.00 90.00 0.00 ........................................................................TTGGGCGTGTGACAGCGGCT.............................................................................................. 20 1 93.00 0.00 0.00 93.00 0.00 .......................................................................CTTGTGCGCGTGACAGCGGCT.............................................................................................. 21 1 92.00 1.00 0.00 91.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGCCTAT............................................................................................ 23 1 90.00 0.00 0.00 90.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGCCT.............................................................................................. 21 1 88.00 1.00 0.00 87.00 0.00 .......................................................................CTTGTGCGTGTGACCGCGGCT.............................................................................................. 21 1 87.00 1.00 0.00 86.00 0.00 ........................................................................TTGTGCGTGTGACAGAGGCTAT............................................................................................ 22 1 85.00 0.00 0.00 85.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTG............................................................................................. 22 1 83.00 0.00 0.00 83.00 0.00 .......................................................................CTTGTGCGTGTGACAGCAGCT.............................................................................................. 21 1 81.00 0.00 0.00 81.00 0.00 .......................................................................CTTGTGCGTGTGACCGCGGCTAT............................................................................................ 23 1 81.00 0.00 0.00 81.00 0.00 .......................................................................CTGGTGCGTGTGACAGCGGCT.............................................................................................. 21 1 80.00 0.00 0.00 80.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTGT............................................................................................ 23 1 79.00 1.00 0.00 78.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTTTT........................................................................................... 24 1 79.00 1.00 0.00 78.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGCTGT............................................................................................ 22 1 79.00 0.00 1.00 78.00 0.00 ........................................................................TTGCGCGTGTGACAGCGGC............................................................................................... 19 1 78.00 0.00 0.00 78.00 0.00 .......................................................................CTTGGGCGTGTGACAGCGGCT.............................................................................................. 21 1 77.00 0.00 0.00 77.00 0.00 .......................................................................CTAGTGCGTGTGACAGCGGCTA............................................................................................. 22 1 77.00 0.00 0.00 77.00 0.00 ........................................................................TTGCGCGTGTGACAGCGGCT.............................................................................................. 20 1 76.00 2.00 0.00 74.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCC.............................................................................................. 21 1 76.00 2.00 0.00 69.00 5.00 ........................................................................TTATGCGTGTGACAGCGGCT.............................................................................................. 20 1 75.00 0.00 0.00 75.00 0.00 .......................................................................CTTGTGCGTGTGGCAGCGGCTAT............................................................................................ 23 1 75.00 0.00 0.00 75.00 0.00 ........................................................................TTCTGCGTGTGACAGCGGCTAT............................................................................................ 22 1 75.00 0.00 0.00 75.00 0.00 .......................................................................TTTGTGCGTGTGACAGCGGCTA............................................................................................. 22 1 74.00 0.00 0.00 74.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTATC........................................................................................... 24 1 73.00 2.00 0.00 71.00 0.00 .......................................................................CTTGAGCGTGTGACAGCGGCTAT............................................................................................ 23 1 72.00 0.00 0.00 72.00 0.00 .......................................................................CTTGTGCGTGTGACGGCGGCT.............................................................................................. 21 1 72.00 1.00 0.00 71.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGGCTATG........................................................................................... 24 1 71.00 1.00 0.00 70.00 0.00 .......................................................................CTTGTGCGTGTGACAGCAGCTAT............................................................................................ 23 1 70.00 1.00 0.00 69.00 0.00 .......................................................................CTTGTGCGTGTGGCAGCGGCT.............................................................................................. 21 1 69.00 1.00 0.00 68.00 0.00 .......................................................................CTTGGGCGTGTGACAGCGGCTAT............................................................................................ 23 1 68.00 0.00 0.00 68.00 0.00 .......................................................................CTTGTGCGTGTGTCAGCGGCT.............................................................................................. 21 1 64.00 0.00 0.00 64.00 0.00 ........................................................................TTATGCGTGTGACAGCGGCTA............................................................................................. 21 1 64.00 0.00 0.00 64.00 0.00 .......................................................................CTTGTGCGTGTGACAGCGTCTAT............................................................................................ 23 1 63.00 1.00 0.00 62.00 0.00 ........................................................................TTGTGCGTGTGGCAGCGGCTAT............................................................................................ 22 1 63.00 2.00 0.00 61.00 0.00 ........................................................................TTGTGCGTGTGACAGCGGTTT............................................................................................. 21 1 63.00 5.00 0.00 58.00 0.00

droPer1 - 1 hit found