dme-mir-184- Best orthologs

dme-mir-184	chr2R:9216907-9217006 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 9216925-9216946
   star strand at position 9216964-9216985
   mutations
   read mismatches

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Species	Coordinate	Source	Confidence	Alignment
dm3	chr2R:9216892-9217021 -		1	CT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAACCAAT-----------------------------AC-------------------------CCATT--
droSim1	chr2R:7673827-7673955 -	LASTZ	1	CT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CC-------------------------CCATT--
droSec1	super_1:6740004-6740132 -	LASTZ	1	TT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CT-------------------------CCATT--
droYak2	chr2R:7742247-7742374 +	LASTZ	1	CT--GGGCTGA-----------------CCCGAGTGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATT-GAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CC-------------------------CCATT--
droEre2	scaffold_4845:16598085-16598213 +	LASTZ	1	CT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCGTCAAGC-AAT-----------------------------CC-------------------------CCAGT--
droEug1	scf7180000409663:1025828-1025957 -	LASTZ	4	GT--AGGCTGA---T-------------CCCAAGGATTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGA-AAT-----------------------------CC-------------------------CCATG--
droBia1	scf7180000302291:976390-976518 +	LASTZ	4	CT--AGGCTGA-----------------CCCAAGGGCTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGT-AAT-----------------------------TC-------------------------CCGTA--
droTak1	scf7180000415379:383248-383376 -	LASTZ	4	CT--GGGCTGA-----------------CCCTCGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACGACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGT-AAT-----------------------------CC-------------------------CTATG--
droEle1	scf7180000491282:440692-440819 -	LASTZ	4	CT--TGGCTGA-----------------CCTCAGGGTTGGTCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCATGTCATCAATA-GGT-----------------------------CT-------------------------ATAT---
droRho1	scf7180000779889:44621-44736 -	LASTZ	4	CT--AGGCTGA-----------------CCTCAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATT-CAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAGTTCATCAA---------------------------------------------------------------------
droFic1	scf7180000454039:23850-23978 -	LASTZ	4	CT--GGGCTGA-----------------TCGAAGGATTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTACAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAGA-AAT-----------------------------CC-------------------------CCATT--
droKik1	scf7180000302277:621916-622079 +	LASTZ	4	CG--AGGCTAA---CCCTGCATAA------TGGGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCGTAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCGATTCATCAAGC-TGT-----------------------------TGCCACGAGGAAATCCCAGCAAATTACCCGTTCC
droAna3	scaffold_13266:16524568-16524693 -	LASTZ	1	CCCAGTGCCGG--------------------CGAGTCCGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGGT-TGT--------------------------------------------------------CCATC--
droBip1	scf7180000396384:634133-634283 -	LASTZ	4	CA--AGTGTAT-----------------CTGAGAGCGCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGGT-TGT--------CAATTCATCAGTTGGGAGTTTCC-------------------------CCAAA--
dp4	chr3:696696-696816 +	LASTZ	1	----GGGTCGG----CCCGGGGAC------TCCGGGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------------------------------------------
droPer1	super_2:863138-863258 +	LASTZ	1	----GGGTCGG----CCCGGGGAC------TCCGGGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------------------------------------------
droWil1	scaffold_181009:2073162-2073280 -	LASTZ	1	AC--GCGAAGA-------------GTCAGT-TAAAGCTGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCAACA----------------------------------------------------------------------
droVir3	scaffold_12875:243286-243412 +	LASTZ	1	TT--GGGCT---------------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAAC-TAAGTGCAGCA---------------------AC-------------------------TATTT--
droMoj3	scaffold_6496:5255786-5255918 -	LASTZ	1	AA--TGGCCAATCTGCCGT-----------TGGGCATTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAA---AT-----------------------------AC-------------------------ATGCG--
droGri2	scaffold_15245:10719551-10719668 -	LASTZ	1	CC--AGCCTGC-----------------ATATGGTTTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGGATAACTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAA--------------------------------------------------------------------

Legend

0- The ortholog is absent. A better synthenic sequence candidate could not be found.
1- Reads w/ good pileup on mature and star strand & folds into hairpin structure.
2- Reads w/ good pileup on mature and star strand BUT does not fold into hairpin structure.
3- Sporadic reads & folds into a hairpin structure.
4- No reads but folds into a hairpin structure.
5- Ortholog is confident but miRNA appears absent (no reads and does not fold into a hairpin)

Re-alignment after removal of non-confident orthologs

Species	Alignment
dm3	CT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAACCAAT-----------------------------AC-------------------------CCATT--
droSim1	CT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CC-------------------------CCATT--
droSec1	TT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CT-------------------------CCATT--
droYak2	CT--GGGCTGA-----------------CCCGAGTGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATT-GAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CC-------------------------CCATT--
droEre2	CT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCGTCAAGC-AAT-----------------------------CC-------------------------CCAGT--
droEug1	GT--AGGCTGA---T-------------CCCAAGGATTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGA-AAT-----------------------------CC-------------------------CCATG--
droBia1	CT--AGGCTGA-----------------CCCAAGGGCTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGT-AAT-----------------------------TC-------------------------CCGTA--
droTak1	CT--GGGCTGA-----------------CCCTCGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACGACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGT-AAT-----------------------------CC-------------------------CTATG--
droEle1	CT--TGGCTGA-----------------CCTCAGGGTTGGTCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCATGTCATCAATA-GGT-----------------------------CT-------------------------ATAT---
droRho1	CT--AGGCTGA-----------------CCTCAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATT-CAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAGTTCATCAA---------------------------------------------------------------------
droFic1	CT--GGGCTGA-----------------TCGAAGGATTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTACAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAGA-AAT-----------------------------CC-------------------------CCATT--
droKik1	CG--AGGCTAA---CCCTGCATAA------TGGGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCGTAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCGATTCATCAAGC-TGT-----------------------------TGCCACGAGGAAATCCCAGCAAATTACCCGTTCC
droAna3	CCCAGTGCCGG--------------------CGAGTCCGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGGT-TGT--------------------------------------------------------CCATC--
droBip1	CA--AGTGTAT-----------------CTGAGAGCGCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGGT-TGT--------CAATTCATCAGTTGGGAGTTTCC-------------------------CCAAA--
dp4	----GGGTCGG----CCCGGGGAC------TCCGGGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------------------------------------------
droPer1	----GGGTCGG----CCCGGGGAC------TCCGGGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------------------------------------------
droWil1	AC--GCGAAGA-------------GTCAGT-TAAAGCTGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCAACA----------------------------------------------------------------------
droVir3	TT--GGGCT---------------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAAC-TAAGTGCAGCA---------------------AC-------------------------TATTT--
droMoj3	AA--TGGCCAATCTGCCGT-----------TGGGCATTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAA---AT-----------------------------AC-------------------------ATGCG--
droGri2	CC--AGCCTGC-----------------ATATGGTTTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGGATAACTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAA--------------------------------------------------------------------

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

Small RNA-seq read pileup

Species

Alignment

droSim1

CT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CC-------------------------CCATT--	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
..............................................................................................TGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	999760.00	134335.00	477728.00	198580.00	189117.00
..............................................................................................TGGACGGAGAACTGATAAGGG..........................................................................................	21	1	90006.00	14525.00	53511.00	15847.00	6123.00
..............................................................................................TGGACGGAGAACTGATAAGG...........................................................................................	20	1	44398.00	1613.00	31478.00	10278.00	1029.00
..............................................................................................TGGACGGAGAACTGATAAGGGCA........................................................................................	23	1	39930.00	1467.00	23264.00	6973.00	8226.00
..............................................................................................TGGACGGAGAACTGATAAG............................................................................................	19	1	39474.00	72.00	29740.00	8359.00	1303.00
..............................................................................................TGGACGGAGAACTGATAAGGGCT........................................................................................	23	1	23810.00	671.00	12559.00	9072.00	1508.00
..............................................................................................TGGACGGAGAACTGATAAGGAC.........................................................................................	22	1	18908.00	87.00	11316.00	3788.00	3717.00
..............................................................................................TGGACGGAGAACTGATAA.............................................................................................	18	1	17147.00	1.00	12959.00	3585.00	602.00
..............................................................................................TGGACGGAGAACTGATAAGGGA.........................................................................................	22	1	13118.00	722.00	8564.00	2596.00	1236.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTT.......................................................................................	24	1	12973.00	99.00	4197.00	7987.00	690.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAT.......................................................................................	24	1	7818.00	97.00	4276.00	2490.00	955.00
..............................................................................................TGGACGGAGAACTGATAAGGGT.........................................................................................	22	1	6187.00	612.00	3784.00	1515.00	276.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTT......................................................................................	25	1	5680.00	13.00	1230.00	4291.00	146.00
..............................................................................................TGGACGGAGAACTGATAAA............................................................................................	19	1	4304.00	0.00	3398.00	814.00	92.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTTT.....................................................................................	26	1	4169.00	0.00	416.00	3701.00	52.00
..............................................................................................TGGACGGAGAACTGATAAGGGCC........................................................................................	23	1	4023.00	139.00	2333.00	1096.00	455.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAA.......................................................................................	24	1	2828.00	114.00	202.00	216.00	2296.00
..............................................................................................TGGACGGAGAACTGATAAGGA..........................................................................................	21	1	2629.00	13.00	1810.00	748.00	58.00
..............................................................................................TGGACGGAGAACTGATAAGGGG.........................................................................................	22	1	2391.00	248.00	1214.00	535.00	394.00
..............................................................................................TGGACGGAGAACTGATAAGGGCG........................................................................................	23	1	2160.00	12.00	1095.00	616.00	437.00
..............................................................................................TGGACGGAGAACTGATAAGGGAA........................................................................................	23	1	2154.00	70.00	1458.00	240.00	386.00
..............................................................................................TGGACGGAGAACTGATAAGGGTT........................................................................................	23	1	1616.00	5.00	969.00	610.00	32.00
..............................................................................................TGGACGGAGAACTGATAGGGGC.........................................................................................	22	1	1613.00	122.00	1061.00	220.00	210.00
..............................................................................................TGGACGGAGAACTGATAAGA...........................................................................................	20	1	1541.00	0.00	1260.00	267.00	14.00
..............................................................................................TTGACGGAGAACTGATAAGGGC.........................................................................................	22	1	1378.00	29.00	524.00	222.00	603.00
..............................................................................................TGGACGGAGCACTGATAAGGGC.........................................................................................	22	1	1292.00	799.00	394.00	48.00	51.00
..............................................................................................TGGGCGGAGAACTGATAAGGGC.........................................................................................	22	1	1285.00	192.00	567.00	261.00	265.00
..............................................................................................TGGACGGAGAACTGATAAGCGC.........................................................................................	22	1	1193.00	218.00	597.00	112.00	266.00
..............................................................................................TGGACGGAGAACTGATAAGGT..........................................................................................	21	1	1185.00	20.00	738.00	418.00	9.00
..............................................................................................TGGACGGAGAACTGATAAGGGAT........................................................................................	23	1	1168.00	7.00	604.00	502.00	55.00
..............................................................................................TGGACTGAGAACTGATAAGGGC.........................................................................................	22	1	1167.00	32.00	864.00	163.00	108.00
..............................................................................................TGGACGGAGAACTGATAAGT...........................................................................................	20	1	1114.00	1.00	818.00	291.00	4.00
..............................................................................................TGGACGGAGAGCTGATAAGGGC.........................................................................................	22	1	1096.00	241.00	470.00	206.00	179.00
..............................................................................................TGGACGGAGAACTGATAAGTGC.........................................................................................	22	1	996.00	238.00	495.00	92.00	171.00
..............................................................................................TGGACGGAGAACTGATAAGGGTTT.......................................................................................	24	1	966.00	0.00	413.00	541.00	12.00
..............................................................................................TGGACGGGGAACTGATAAGGGC.........................................................................................	22	1	952.00	211.00	307.00	228.00	206.00
..............................................................................................TGGACCGAGAACTGATAAGGGC.........................................................................................	22	1	906.00	20.00	598.00	87.00	201.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTAT......................................................................................	25	1	898.00	1.00	252.00	572.00	73.00
..............................................................................................TGGACGGAGAACTGGTAAGGGC.........................................................................................	22	1	833.00	263.00	312.00	146.00	112.00
..............................................................................................TGGAAGGAGAACTGATAAGGGC.........................................................................................	22	1	814.00	754.00	13.00	35.00	12.00
..............................................................................................CGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	768.00	200.00	301.00	118.00	149.00
..............................................................................................TGGACGGAGGACTGATAAGGGC.........................................................................................	22	1	761.00	342.00	182.00	119.00	118.00
..............................................................................................TGGACGGAGAACTGATGAGGGC.........................................................................................	22	1	725.00	150.00	318.00	144.00	113.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTA.......................................................................................	24	1	698.00	15.00	201.00	407.00	75.00
..............................................................................................TGGACGGAGAACTGATAG.............................................................................................	18	1	681.00	0.00	471.00	134.00	76.00
..............................................................................................TGGACGGATAACTGATAAGGGC.........................................................................................	22	1	656.00	22.00	414.00	128.00	92.00
..............................................................................................TGGACGGAGAACTCATAAGGGC.........................................................................................	22	1	605.00	52.00	330.00	56.00	167.00
..............................................................................................TGGATGGAGAACTGATAAGGGC.........................................................................................	22	1	602.00	209.00	216.00	91.00	86.00
..............................................................................................TGGACGGAGAACTGCTAAGGGC.........................................................................................	22	1	564.00	522.00	24.00	7.00	11.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAC.......................................................................................	24	1	554.00	9.00	339.00	94.00	112.00
..............................................................................................TGGACGGAGAACTGATAATGGC.........................................................................................	22	1	553.00	254.00	189.00	38.00	72.00
...............................................................................................TGACGGAGAACTGATAAGGGC.........................................................................................	21	1	550.00	17.00	257.00	83.00	193.00
..............................................................................................TGGACGGAGAACCGATAAGGGC.........................................................................................	22	1	515.00	148.00	190.00	96.00	81.00
...............................................................................................GGACGGAGAACTGATAAGGGC.........................................................................................	21	1	506.00	46.00	256.00	111.00	93.00
................................................................................................GACGGAGAACTGATAAGGGC.........................................................................................	20	1	465.00	17.00	184.00	69.00	195.00
..............................................................................................TGGACGGAGAACTGATAAGGTC.........................................................................................	22	1	461.00	69.00	208.00	63.00	121.00
..............................................................................................TGGACGGAGAACTGATAAAGGC.........................................................................................	22	1	453.00	230.00	135.00	46.00	42.00
..............................................................................................TAGACGGAGAACTGATAAGGGC.........................................................................................	22	1	451.00	118.00	161.00	82.00	90.00
..............................................................................................TGTACGGAGAACTGATAAGGGC.........................................................................................	22	1	434.00	16.00	204.00	74.00	140.00
..............................................................................................TGGACGGAGAACTGATAAGGCC.........................................................................................	22	1	421.00	51.00	143.00	96.00	131.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTC.......................................................................................	24	1	417.00	6.00	205.00	184.00	22.00
..............................................................................................TGGACGGAGAACTGATCAGGGC.........................................................................................	22	1	413.00	394.00	7.00	3.00	9.00
..............................................................................................TGGACGGAGAACTTATAAGGGC.........................................................................................	22	1	406.00	30.00	206.00	68.00	102.00
..............................................................................................TGGACGGAGAACTGACAAGGGC.........................................................................................	22	1	398.00	162.00	126.00	72.00	38.00
.............................................................................................CTGGACGGAGAACTGATAAGGGC.........................................................................................	23	1	398.00	193.00	98.00	36.00	71.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTAT.....................................................................................	26	1	397.00	0.00	115.00	277.00	5.00
..............................................................................................TGGACGGACAACTGATAAGGGC.........................................................................................	22	1	386.00	34.00	215.00	77.00	60.00
..............................................................................................TGGACGGAGAACTGATAACGGC.........................................................................................	22	1	378.00	144.00	154.00	24.00	56.00
..............................................................................................TGGACAGAGAACTGATAAGGGC.........................................................................................	22	1	371.00	101.00	142.00	60.00	68.00
..............................................................................................TGGACGGAGAAATGATAAGGGC.........................................................................................	22	1	361.00	236.00	59.00	32.00	34.00
..............................................................................................TCGACGGAGAACTGATAAGGGC.........................................................................................	22	1	343.00	38.00	132.00	44.00	129.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTA......................................................................................	25	1	334.00	0.00	95.00	227.00	12.00
..............................................................................................TGGACGGAGAACTGATAAGGAA.........................................................................................	22	1	324.00	1.00	184.00	113.00	26.00
..............................................................................................TGGACGGAGAACTGATAAGAGC.........................................................................................	22	1	319.00	127.00	108.00	33.00	51.00
..............................................................................................TGGACGGAGAACTGATAT.............................................................................................	18	1	314.00	0.00	240.00	72.00	2.00
..............................................................................................TGGACGGAGTACTGATAAGGGC.........................................................................................	22	1	310.00	245.00	20.00	23.00	22.00
..............................................................................................AGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	296.00	113.00	86.00	44.00	53.00
..............................................................................................TGGACGGAGAACTAATAAGGGC.........................................................................................	22	1	294.00	64.00	130.00	50.00	50.00
..............................................................................................TGGACGGAGAACTGATACGGGC.........................................................................................	22	1	293.00	239.00	33.00	13.00	8.00
..............................................................................................TGGACGGAGACCTGATAAGGGC.........................................................................................	22	1	292.00	243.00	39.00	5.00	5.00
..............................................................................................GGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	285.00	164.00	69.00	27.00	25.00
..............................................................................................TGGACGGAGAACTGATAAGGGCCT.......................................................................................	24	1	267.00	17.00	122.00	105.00	23.00
..............................................................................................TGCACGGAGAACTGATAAGGGC.........................................................................................	22	1	244.00	35.00	89.00	31.00	89.00
..............................................................................................TGAACGGAGAACTGATAAGGGC.........................................................................................	22	1	244.00	79.00	96.00	32.00	37.00
..............................................................................................TGGACGGAGAACTGATAAGGC..........................................................................................	21	1	230.00	13.00	137.00	60.00	20.00
..............................................................................................TGGACGGAGAACTGATAAAA...........................................................................................	20	1	229.00	0.00	171.00	28.00	30.00
..............................................................................................TGGACGGAGAACTGATAAGGTT.........................................................................................	22	1	210.00	4.00	93.00	111.00	2.00
..............................................................................................TGGACGGAGAACTTATAAG............................................................................................	19	1	203.00	0.00	172.00	29.00	2.00
..............................................................................................TGGACTGAGAACTGATAAGGG..........................................................................................	21	1	198.00	1.00	151.00	36.00	10.00
..............................................................................................TGGACGGAGAACTGATAAT............................................................................................	19	1	193.00	0.00	147.00	45.00	1.00
..............................................................................................TGGACGGCGAACTGATAAGGGC.........................................................................................	22	1	186.00	121.00	21.00	19.00	25.00
..............................................................................................TGGACGCAGAACTGATAAGGGC.........................................................................................	22	1	185.00	13.00	124.00	18.00	30.00
..............................................................................................TGGACGGAGAATTGATAAGGGC.........................................................................................	22	1	184.00	48.00	86.00	30.00	20.00
..............................................................................................TGGACGGAGAACTGATTT.............................................................................................	18	1	179.00	0.00	113.00	66.00	0.00
..............................................................................................TGGACGGAGAACTGAGAAGGGC.........................................................................................	22	1	176.00	146.00	15.00	11.00	4.00
..............................................................................................TGGACGGAGCACTGATAAGGG..........................................................................................	21	1	175.00	114.00	53.00	5.00	3.00
..............................................................................................TGGACGGAGAACTGATAAC............................................................................................	19	1	175.00	0.00	141.00	25.00	9.00
..............................................................................................TGGACGGAGAACTGATAAGGGCCA.......................................................................................	24	1	167.00	13.00	64.00	65.00	25.00
..............................................................................................TGGACGGAAAACTGATAAGGGC.........................................................................................	22	1	164.00	28.00	91.00	28.00	17.00
..............................................................................................TGGACGGAGAACTGATAAGGGTA........................................................................................	23	1	161.00	5.00	88.00	46.00	22.00
.............................................................................................GTGGACGGAGAACTGATAAGGGC.........................................................................................	23	1	160.00	0.00	87.00	25.00	48.00

droSec1

TT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CT-------------------------CCATT--	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
..............................................................................................TGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	1056659.00	215789.00	269456.00	571414.00
..............................................................................................TGGACGGAGAACTGATAAGGG..........................................................................................	21	1	328180.00	84377.00	30326.00	213477.00
..............................................................................................TGGACGGAGAACTGATAAGG...........................................................................................	20	1	97596.00	37784.00	2904.00	56908.00
..............................................................................................TGGACGGAGAACTGATAAGGGT.........................................................................................	22	1	19023.00	8166.00	759.00	10098.00
..............................................................................................TGGACGGAGAACTGATAAGGGCT........................................................................................	23	1	17256.00	6546.00	2283.00	8427.00
..............................................................................................TGGACGGAGAACTGATAAG............................................................................................	19	1	13425.00	4079.00	188.00	9158.00
..............................................................................................TGGACGGAGAACTGATAAGGGA.........................................................................................	22	1	11164.00	3060.00	684.00	7420.00
..............................................................................................TGGACGGAGAACTGATAAGGGCA........................................................................................	23	1	8138.00	2376.00	1296.00	4466.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTT.......................................................................................	24	1	5842.00	4031.00	355.00	1456.00
..............................................................................................TGGACGGAGAACTGATAAAGGC.........................................................................................	22	1	3538.00	1934.00	287.00	1317.00
..............................................................................................TGGACGGAGAACTGATAACGGC.........................................................................................	22	1	2822.00	2139.00	176.00	507.00
..............................................................................................TGGACGGAGAACTGATAAGGT..........................................................................................	21	1	2478.00	1418.00	27.00	1033.00
..............................................................................................TGGACGGAGAACTGATAAGGGTT........................................................................................	23	1	2362.00	1179.00	28.00	1155.00
..............................................................................................TGGACGGAGAACTGATAATGGC.........................................................................................	22	1	2249.00	1236.00	153.00	860.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTT......................................................................................	25	1	2057.00	1628.00	56.00	373.00
.............................................................................................CTGGACGGAGAACTGATAAGGGC.........................................................................................	23	1	2020.00	281.00	535.00	1204.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAT.......................................................................................	24	1	1960.00	1049.00	75.00	836.00
..............................................................................................TGGATGGAGAACTGATAAGGGC.........................................................................................	22	1	1728.00	172.00	924.00	632.00
..............................................................................................TGGACGGAGAACTGATAAGGCC.........................................................................................	22	1	1471.00	566.00	280.00	625.00
..............................................................................................TGGACGGAGAACTGATAAGGGCC........................................................................................	23	1	1450.00	420.00	409.00	621.00
..............................................................................................TGGACGGAGAGCTGATAAGGGC.........................................................................................	22	1	1361.00	244.00	477.00	640.00
..............................................................................................TTGACGGAGAACTGATAAGGGC.........................................................................................	22	1	1315.00	219.00	228.00	868.00
..............................................................................................TGTACGGAGAACTGATAAGGGC.........................................................................................	22	1	1288.00	237.00	217.00	834.00
..............................................................................................TGGACGGGGAACTGATAAGGGC.........................................................................................	22	1	1263.00	196.00	500.00	567.00
..............................................................................................CGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	1149.00	268.00	310.00	571.00
..............................................................................................TGGACGGAGAACTGATAAAGG..........................................................................................	21	1	1095.00	738.00	10.00	347.00
..............................................................................................TGGACGGAGAACTGATAAGGGTTT.......................................................................................	24	1	1093.00	731.00	4.00	358.00
..............................................................................................TGGACTGAGAACTGATAAGGGC.........................................................................................	22	1	1091.00	96.00	192.00	803.00
..............................................................................................TGGACAGAGAACTGATAAGGGC.........................................................................................	22	1	1078.00	143.00	173.00	762.00
..............................................................................................TGGACGGAGGACTGATAAGGGC.........................................................................................	22	1	1074.00	176.00	418.00	480.00
..............................................................................................TGGACGGAGAACTGATAAGGA..........................................................................................	21	1	1031.00	520.00	25.00	486.00
..............................................................................................TGGACGGATAACTGATAAGGGC.........................................................................................	22	1	1024.00	73.00	187.00	764.00
..............................................................................................TGGACGGAGAACCGATAAGGGC.........................................................................................	22	1	1016.00	245.00	321.00	450.00
..............................................................................................TGGACGGAGAACTGGTAAGGGC.........................................................................................	22	1	999.00	170.00	345.00	484.00
..............................................................................................TGGGCGGAGAACTGATAAGGGC.........................................................................................	22	1	983.00	170.00	362.00	451.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTTT.....................................................................................	26	1	933.00	812.00	5.00	116.00
...............................................................................................TGACGGAGAACTGATAAGGGC.........................................................................................	21	1	922.00	149.00	268.00	505.00
..............................................................................................TGGACGAAGAACTGATAAGGGC.........................................................................................	22	1	920.00	65.00	66.00	789.00
..............................................................................................TAGACGGAGAACTGATAAGGGC.........................................................................................	22	1	906.00	119.00	173.00	614.00
..............................................................................................TGGACGGAGAACTGATAACGG..........................................................................................	21	1	895.00	764.00	19.00	112.00
..............................................................................................TGGACGGAGAATTGATAAGGGC.........................................................................................	22	1	870.00	56.00	583.00	231.00
..............................................................................................TGGACGGAGAACTGATAAGAGC.........................................................................................	22	1	827.00	89.00	75.00	663.00
..............................................................................................TGGACGGAGACCTGATAAGGGC.........................................................................................	22	1	815.00	160.00	174.00	481.00
..............................................................................................TGCACGGAGAACTGATAAGGGC.........................................................................................	22	1	808.00	211.00	171.00	426.00
..............................................................................................TGGACGGAGAACTGATAGGGGC.........................................................................................	22	1	807.00	127.00	232.00	448.00
..............................................................................................TCGACGGAGAACTGATAAGGGC.........................................................................................	22	1	797.00	198.00	188.00	411.00
..............................................................................................TGGACGGAGAACTGACAAGGGC.........................................................................................	22	1	779.00	203.00	233.00	343.00
..............................................................................................TGGACGGAGAACTGATAATGG..........................................................................................	21	1	766.00	466.00	5.00	295.00
..............................................................................................TGGACGGAGAACTGCTAAGGGC.........................................................................................	22	1	764.00	162.00	237.00	365.00
..............................................................................................TGGACGGAGAACTGATAAGGC..........................................................................................	21	1	763.00	218.00	131.00	414.00
..............................................................................................TGGACGGAAAACTGATAAGGGC.........................................................................................	22	1	750.00	65.00	165.00	520.00
..............................................................................................TGGACGGACAACTGATAAGGGC.........................................................................................	22	1	743.00	113.00	147.00	483.00
..............................................................................................TGGACGGAGAACTGATAAGCGC.........................................................................................	22	1	735.00	152.00	131.00	452.00
..............................................................................................TGGACGGAGAACTGATAAGGTC.........................................................................................	22	1	732.00	212.00	93.00	427.00
..............................................................................................TGGACGxxGAACTGATAAGGGC.........................................................................................	20	1	657.00	40.00	429.00	188.00
..............................................................................................TGGACGGAGAACTGATAAGGAC.........................................................................................	22	1	653.00	148.00	101.00	404.00
..............................................................................................TGGACGTAGAACTGATAAGGGC.........................................................................................	22	1	639.00	53.00	45.00	541.00
..............................................................................................TGGACGGAGAACTGATGAGGGC.........................................................................................	22	1	634.00	81.00	216.00	337.00
..............................................................................................AGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	622.00	59.00	68.00	495.00
..............................................................................................TGGACGGAGAACTGATAAGTGC.........................................................................................	22	1	619.00	67.00	77.00	475.00
..............................................................................................TGGACGGAGAACTGATAAGGGCCT.......................................................................................	24	1	583.00	225.00	71.00	287.00
..............................................................................................TGTACGGAGAACTGATAAGGG..........................................................................................	21	1	552.00	96.00	25.00	431.00
.............................................................................................CTGGACGGAGAACTGATAAGGG..........................................................................................	22	1	537.00	100.00	59.00	378.00
..............................................................................................TGGACCGAGAACTGATAAGGGC.........................................................................................	22	1	537.00	93.00	96.00	348.00
..............................................................................................TGGACGCAGAACTGATAAGGGC.........................................................................................	22	1	532.00	96.00	94.00	342.00
..............................................................................................TTGACGGAGAACTGATAAGGG..........................................................................................	21	1	529.00	94.00	29.00	406.00
..............................................................................................TGGACGGAGCACTGATAAGGGC.........................................................................................	22	1	529.00	123.00	207.00	199.00
..............................................................................................TGGCCGGAGAACTGATAAGGGC.........................................................................................	22	1	506.00	213.00	91.00	202.00
.......................................................CCTTATCATTCTCTCGCCCCGT................................................................................................................................	22	1	500.00	117.00	346.00	37.00
..............................................................................................TGGACGGCGAACTGATAAGGGC.........................................................................................	22	1	483.00	118.00	92.00	273.00
..............................................................................................TGGACGGAGAAATGATAAGGGC.........................................................................................	22	1	475.00	47.00	202.00	226.00
..............................................................................................TGGACGGAGAACTTATAAGGGC.........................................................................................	22	1	468.00	72.00	76.00	320.00
..............................................................................................TGGATGGAGAACTGATAAGGG..........................................................................................	21	1	453.00	69.00	109.00	275.00
..............................................................................................TGGAAGGAGAACTGATAAGGGC.........................................................................................	22	1	428.00	45.00	37.00	346.00
..............................................................................................TGGACTGAGAACTGATAAGGG..........................................................................................	21	1	426.00	65.00	19.00	342.00
..............................................................................................TGGACGGAGAACTGATAAGGGAA........................................................................................	23	1	424.00	152.00	69.00	203.00
..............................................................................................TGGACGGAGAACTAATAAGGGC.........................................................................................	22	1	421.00	70.00	117.00	234.00
..............................................................................................TGGACGGAGAACTGATCAGGGC.........................................................................................	22	1	414.00	86.00	157.00	171.00
..............................................................................................TGGACAGAGAACTGATAAGGG..........................................................................................	21	1	411.00	55.00	9.00	347.00
..............................................................................................TGGACGGAGAACTGATAAGGGAT........................................................................................	23	1	406.00	256.00	15.00	135.00
..............................................................................................TGGACGGAGAGCTGATAAGGG..........................................................................................	21	1	395.00	83.00	66.00	246.00
..............................................................................................TGGACGGAGAACTGATAAAG...........................................................................................	20	1	394.00	304.00	2.00	88.00
...............................................................................................GGACGGAGAACTGATAAGGGC.........................................................................................	21	1	390.00	105.00	90.00	195.00
..............................................................................................TGCACGGAGAACTGATAAGGG..........................................................................................	21	1	386.00	64.00	22.00	300.00
..............................................................................................TGGACGGAGAACTCATAAGGGC.........................................................................................	22	1	382.00	99.00	95.00	188.00
..............................................................................................TGGACGGAGAACTGATAAGGGCCA.......................................................................................	24	1	372.00	181.00	27.00	164.00
..............................................................................................TGGACGGGGAACTGATAAGGG..........................................................................................	21	1	372.00	99.00	58.00	215.00
..............................................................................................TGGACGGTGAACTGATAAGGGC.........................................................................................	22	1	371.00	41.00	203.00	127.00
..............................................................................................TGAACGGAGAACTGATAAGGGC.........................................................................................	22	1	365.00	66.00	73.00	226.00
..............................................................................................TGGACGGAGAACTGATAACG...........................................................................................	20	1	349.00	314.00	1.00	34.00
...............................................................................................TGACGGAGAACTGATAAGGG..........................................................................................	20	1	348.00	73.00	29.00	246.00
..............................................................................................TGGACGGATAACTGATAAGGG..........................................................................................	21	1	346.00	28.00	16.00	302.00
..............................................................................................GGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	346.00	35.00	61.00	250.00
..............................................................................................TGGACGGAGAACTGCTAAGGG..........................................................................................	21	1	345.00	107.00	43.00	195.00
..............................................................................................TGGACGGAGAACTGATAAGT...........................................................................................	20	1	342.00	197.00	1.00	144.00
..............................................................................................CGGACGGAGAACTGATAAGGG..........................................................................................	21	1	340.00	82.00	45.00	213.00
..............................................................................................TGGACGGAGAACTGATACGGGC.........................................................................................	22	1	326.00	71.00	89.00	166.00
..............................................................................................TGGACGGAGGACTGATAAGGG..........................................................................................	21	1	325.00	83.00	53.00	189.00
..............................................................................................TGGACGGAGAACCGATAAGGG..........................................................................................	21	1	313.00	86.00	40.00	187.00
..............................................................................................TGGACGGAGAACTGATATGGGC.........................................................................................	22	1	309.00	38.00	166.00	105.00
..............................................................................................TAGACGGAGAACTGATAAGGG..........................................................................................	21	1	303.00	55.00	21.00	227.00

droYak2

CT--GGGCTGA-----------------CCCGAGTGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATT-GAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CC-------------------------CCATT--	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
..............................................................................................TGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	535491.00	86783.00	40764.00	71643.00	96403.00	239898.00
..............................................................................................TGGACGGAGAACTGATAAGGG..........................................................................................	21	1	177593.00	7097.00	34649.00	34117.00	83801.00	17929.00
..............................................................................................TGGACGGAGAACTGATAAGG...........................................................................................	20	1	53034.00	944.00	8648.00	14539.00	21658.00	7245.00
..............................................................................................TGGACGGAGAACTGATAAGGGCT........................................................................................	23	1	14703.00	487.00	1349.00	2667.00	3596.00	6604.00
..............................................................................................TGGACGGAGAACTGATAAG............................................................................................	19	1	14223.00	40.00	1957.00	1475.00	4678.00	6073.00
..............................................................................................TGGACGGAGAACTGATAAGGGCA........................................................................................	23	1	10531.00	425.00	808.00	1061.00	2017.00	6220.00
..............................................................................................TGGACGGAGAACTGATAAGGGA.........................................................................................	22	1	8457.00	362.00	1096.00	980.00	2979.00	3040.00
..............................................................................................TGGACGGAGAACTGATAAGGGT.........................................................................................	22	1	7616.00	194.00	1139.00	2035.00	3085.00	1163.00
..............................................................................................TGGACGGAGAACTGATAAGGAC.........................................................................................	22	1	6493.00	59.00	23.00	66.00	93.00	6252.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTT.......................................................................................	24	1	3960.00	26.00	111.00	808.00	278.00	2737.00
..............................................................................................TGGACGGAGAACTGATAA.............................................................................................	18	1	3029.00	1.00	68.00	4.00	125.00	2831.00
..............................................................................................TGGACGGAGCACTGATAAGGGC.........................................................................................	22	1	1751.00	395.00	196.00	32.00	784.00	344.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAT.......................................................................................	24	1	1663.00	15.00	62.00	211.00	128.00	1247.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTT......................................................................................	25	1	1566.00	6.00	17.00	342.00	47.00	1154.00
..............................................................................................TGGACGGAGAACTGATACGGG..........................................................................................	21	1	1515.00	26.00	143.00	19.00	1327.00	0.00
..............................................................................................TGGACGGAGAACTGATAAGGT..........................................................................................	21	1	1416.00	5.00	206.00	338.00	658.00	209.00
..............................................................................................TGGACGGAGAACTGATAAGGGCC........................................................................................	23	1	1368.00	49.00	44.00	84.00	121.00	1070.00
..............................................................................................TGGACGGAGCACTGATAAGGG..........................................................................................	21	1	1121.00	46.00	226.00	16.00	809.00	24.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTTT.....................................................................................	26	1	1102.00	2.00	3.00	179.00	9.00	909.00
..............................................................................................TGGACGGAGAACTGATAAGTGC.........................................................................................	22	1	1055.00	70.00	139.00	30.00	581.00	235.00
..............................................................................................TGGACGGAGAACTGCTAAGGG..........................................................................................	21	1	1010.00	17.00	151.00	82.00	756.00	4.00
..............................................................................................TGGACGGAGAACTGCTAAGGGC.........................................................................................	22	1	1008.00	175.00	122.00	87.00	609.00	15.00
..............................................................................................TGGACGGAGGACTGATAAGGGC.........................................................................................	22	1	973.00	179.00	110.00	49.00	551.00	84.00
..............................................................................................TGGACGGAGAACTGATAAGGTC.........................................................................................	22	1	948.00	34.00	106.00	145.00	541.00	122.00
..............................................................................................TGGACGGAGAGCTGATAAGGGC.........................................................................................	22	1	863.00	152.00	87.00	70.00	286.00	268.00
..............................................................................................TGGGCGGAGAACTGATAAGGGC.........................................................................................	22	1	860.00	144.00	84.00	46.00	320.00	266.00
..............................................................................................TGGACGGAGAACTGATACGGGC.........................................................................................	22	1	832.00	161.00	51.00	20.00	583.00	17.00
..............................................................................................TGGACGGAGAACTGATAAGGGG.........................................................................................	22	1	824.00	160.00	63.00	9.00	70.00	522.00
..............................................................................................TGGACGGAGAACTGATAAGCGC.........................................................................................	22	1	818.00	107.00	89.00	22.00	344.00	256.00
..............................................................................................TGGACGGAGAACTGATAAGTG..........................................................................................	21	1	807.00	12.00	182.00	25.00	588.00	0.00
..............................................................................................TGGAAGGAGAACTGATAAGGGC.........................................................................................	22	1	796.00	340.00	94.00	5.00	345.00	12.00
..............................................................................................TGGACGGAGAACTGATAAGGA..........................................................................................	21	1	763.00	5.00	81.00	119.00	221.00	337.00
..............................................................................................TGGACGGAGAACTGATCAGGG..........................................................................................	21	1	747.00	30.00	217.00	16.00	481.00	3.00
..............................................................................................TGGACGGGGAACTGATAAGGGC.........................................................................................	22	1	737.00	124.00	82.00	59.00	314.00	158.00
..............................................................................................TGGACGGAGGACTGATAAGGG..........................................................................................	21	1	730.00	14.00	138.00	31.00	539.00	8.00
..............................................................................................TGGACGGAGAACTGATAGGGGC.........................................................................................	22	1	719.00	78.00	43.00	45.00	167.00	386.00
..............................................................................................TGGACGGAGAACTGATAATGGC.........................................................................................	22	1	686.00	84.00	166.00	63.00	288.00	85.00
..............................................................................................TGGACGGAGAACTGATAAGGGTT........................................................................................	23	1	681.00	5.00	54.00	188.00	179.00	255.00
..............................................................................................TGGACGGAGAACTGATAAGGCC.........................................................................................	22	1	679.00	20.00	23.00	328.00	189.00	119.00
..............................................................................................TGGACGGAGACCTGATAAGGGC.........................................................................................	22	1	661.00	115.00	33.00	81.00	419.00	13.00
..............................................................................................TGGACGGAGTACTGATAAGGGC.........................................................................................	22	1	644.00	124.00	40.00	7.00	454.00	19.00
..............................................................................................TGGACGGAGAACTGATAAGGGCG........................................................................................	23	1	638.00	6.00	24.00	13.00	59.00	536.00
..............................................................................................TGGACGGAGAACTGGTAAGGGC.........................................................................................	22	1	620.00	147.00	54.00	59.00	211.00	149.00
..............................................................................................TGGACGGAGAACTGATAAGGGAA........................................................................................	23	1	613.00	20.00	38.00	54.00	111.00	390.00
..............................................................................................TGGACGGAGAACTGATAAAGGC.........................................................................................	22	1	609.00	215.00	185.00	55.00	106.00	48.00
..............................................................................................TAGACGGAGAACTGATAAGGGC.........................................................................................	22	1	590.00	131.00	220.00	48.00	89.00	102.00
..............................................................................................TGGACGGAGAACTGATCAGGGC.........................................................................................	22	1	571.00	181.00	122.00	20.00	240.00	8.00
..............................................................................................CGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	569.00	98.00	58.00	91.00	203.00	119.00
..............................................................................................TTGACGGAGAACTGATAAGGGC.........................................................................................	22	1	546.00	14.00	9.00	79.00	32.00	412.00
.............................................................................................CTGGACGGAGAACTGATAAGGGC.........................................................................................	23	1	532.00	115.00	64.00	127.00	176.00	50.00
..............................................................................................TGGACGGAGTACTGATAAGGG..........................................................................................	21	1	518.00	17.00	40.00	3.00	455.00	3.00
..............................................................................................TGGACGGAGAACTGATAAA............................................................................................	19	1	507.00	0.00	6.00	3.00	18.00	480.00
..............................................................................................TGGACGGAGAACTGATAATGG..........................................................................................	21	1	483.00	7.00	157.00	24.00	290.00	5.00
..............................................................................................TGGACGGAGAACTGATAAGCG..........................................................................................	21	1	464.00	17.00	68.00	10.00	367.00	2.00
..............................................................................................TGGACGGGGAACTGATAAGGG..........................................................................................	21	1	437.00	8.00	70.00	36.00	311.00	12.00
..............................................................................................TGGACGGAGAACTGACAAGGGC.........................................................................................	22	1	433.00	86.00	53.00	80.00	116.00	98.00
..............................................................................................TGGACGGAGAACTGATGAGGGC.........................................................................................	22	1	432.00	86.00	74.00	27.00	109.00	136.00
..............................................................................................TGGACGGAGAACTGATAACGGC.........................................................................................	22	1	427.00	56.00	48.00	33.00	212.00	78.00
..............................................................................................TGGACGGAGAACTGATAAGGC..........................................................................................	21	1	401.00	6.00	40.00	90.00	201.00	64.00
..............................................................................................TGGACGGAGAACTGATAAGAGC.........................................................................................	22	1	397.00	108.00	71.00	29.00	143.00	46.00
..............................................................................................TGGACAGAGAACTGATAAGGGC.........................................................................................	22	1	386.00	106.00	121.00	41.00	42.00	76.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAA.......................................................................................	24	1	383.00	32.00	11.00	18.00	40.00	282.00
..............................................................................................TGGACGGAGAGCTGATAAGGG..........................................................................................	21	1	380.00	10.00	59.00	37.00	254.00	20.00
..............................................................................................TGGACGGAGACCTGATAAGGG..........................................................................................	21	1	370.00	10.00	27.00	36.00	296.00	1.00
..............................................................................................TGGATGGAGAACTGATAAGGGC.........................................................................................	22	1	363.00	94.00	44.00	41.00	93.00	91.00
..............................................................................................TGGACGGAGAACCGATAAGGGC.........................................................................................	22	1	362.00	90.00	42.00	60.00	93.00	77.00
..............................................................................................TGGACGGAGAACTGATAGGGG..........................................................................................	21	1	358.00	12.00	46.00	16.00	255.00	29.00
..............................................................................................TGGACGGAGAACTGATACGG...........................................................................................	20	1	351.00	4.00	33.00	12.00	302.00	0.00
..............................................................................................TGGACGGCGAACTGATAAGGGC.........................................................................................	22	1	348.00	35.00	23.00	97.00	182.00	11.00
..............................................................................................TGGACGGAGAACTGGTAAGGG..........................................................................................	21	1	346.00	18.00	54.00	32.00	233.00	9.00
..............................................................................................TGGCCGGAGAACTGATAAGGGC.........................................................................................	22	1	336.00	49.00	46.00	30.00	207.00	4.00
..............................................................................................TGGGCGGAGAACTGATAAGGG..........................................................................................	21	1	326.00	11.00	68.00	20.00	205.00	22.00
..............................................................................................TGGACGGAGAAATGATAAGGGC.........................................................................................	22	1	318.00	98.00	22.00	30.00	56.00	112.00
..............................................................................................TGGAAGGAGAACTGATAAGGG..........................................................................................	21	1	317.00	23.00	65.00	3.00	226.00	0.00
..............................................................................................TGGACGGAGCACTGATAAGG...........................................................................................	20	1	310.00	5.00	74.00	9.00	217.00	5.00
..............................................................................................TGGACGGAGAACTGAGAAGGGC.........................................................................................	22	1	309.00	51.00	39.00	6.00	195.00	18.00
..............................................................................................TGGACGGAGAACTGATAAGGGTTT.......................................................................................	24	1	305.00	0.00	6.00	117.00	20.00	162.00
..............................................................................................AGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	292.00	42.00	38.00	14.00	166.00	32.00
.............................................................................................CTGGACGGAGAACTGATAAGGG..........................................................................................	22	1	288.00	16.00	62.00	61.00	140.00	9.00
..............................................................................................TGGACGGAGAACTGATAAAGG..........................................................................................	21	1	278.00	18.00	130.00	17.00	83.00	30.00
..............................................................................................TGGACGGAGAACTGATAAGT...........................................................................................	20	1	273.00	0.00	17.00	35.00	86.00	135.00
..............................................................................................TAGACGGAGAACTGATAAGGG..........................................................................................	21	1	273.00	15.00	174.00	18.00	62.00	4.00
..............................................................................................TGGACGGAGAACTGCTAAGG...........................................................................................	20	1	271.00	3.00	39.00	34.00	194.00	1.00
..............................................................................................TGGACGGAGAACTAATAAGGGC.........................................................................................	22	1	270.00	53.00	51.00	21.00	80.00	65.00
..............................................................................................TGTACGGAGAACTGATAAGGGC.........................................................................................	22	1	264.00	8.00	14.00	64.00	52.00	126.00
..............................................................................................TGGACGGCGAACTGATAAGGG..........................................................................................	21	1	262.00	6.00	15.00	59.00	181.00	1.00
..............................................................................................TGGACGGAGAACTGATAAGA...........................................................................................	20	1	260.00	1.00	14.00	19.00	40.00	186.00
..............................................................................................TGGACGGAGAACTGATCAGG...........................................................................................	20	1	253.00	6.00	71.00	10.00	166.00	0.00
..............................................................................................TGGACGGAGAACTCATAAGGGC.........................................................................................	22	1	253.00	24.00	19.00	20.00	55.00	135.00
...............................................................................................GGACGGAGAACTGATAAGGGC.........................................................................................	21	1	249.00	40.00	15.00	23.00	46.00	125.00
..............................................................................................TGGACCGAGAACTGATAAGGGC.........................................................................................	22	1	241.00	22.00	15.00	28.00	22.00	154.00
..............................................................................................CGGACGGAGAACTGATAAGGG..........................................................................................	21	1	240.00	10.00	41.00	30.00	144.00	15.00
..............................................................................................TCGACGGAGAACTGATAAGGGC.........................................................................................	22	1	239.00	16.00	14.00	49.00	58.00	102.00
..............................................................................................TGGACGGATAACTGATAAGGGC.........................................................................................	22	1	236.00	14.00	18.00	30.00	41.00	133.00
..............................................................................................TGGACGGAGAACTGATAACGG..........................................................................................	21	1	232.00	7.00	30.00	12.00	178.00	5.00
...............................................................................................TGACGGAGAACTGATAAGGGC.........................................................................................	21	1	225.00	9.00	4.00	51.00	7.00	154.00
..............................................................................................TGGACTGAGAACTGATAAGGGC.........................................................................................	22	1	223.00	10.00	10.00	34.00	41.00	128.00
..............................................................................................TGGACGGAGAACTGATAAGAG..........................................................................................	21	1	217.00	20.00	67.00	11.00	116.00	3.00
..............................................................................................TGGACGGAGAACTGATGAGGG..........................................................................................	21	1	214.00	9.00	72.00	22.00	99.00	12.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTA.......................................................................................	24	1	213.00	2.00	7.00	21.00	25.00	158.00
..............................................................................................TGAACGGAGAACTGATAAGGGC.........................................................................................	22	1	208.00	48.00	30.00	20.00	68.00	42.00

droEre2

CT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCGTCAAGC-AAT-----------------------------CC-------------------------CCAGT--	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
..............................................................................................TGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	958170.00	39992.00	70629.00	0.00	847549.00
..............................................................................................TGGACGGAGAACTGATAAGGG..........................................................................................	21	1	352713.00	3953.00	58606.00	0.00	290154.00
..............................................................................................TGGACGGAGAACTGATAAGG...........................................................................................	20	1	70475.00	416.00	14515.00	0.00	55544.00
..............................................................................................TGGACGGAGAACTGATAATGGC.........................................................................................	22	1	17050.00	442.00	219.00	0.00	16389.00
..............................................................................................TGGACTGAGAACTGATAAGGGC.........................................................................................	22	1	14624.00	71.00	16.00	0.00	14537.00
..............................................................................................TGGACGGAGAACTGATAAGGGA.........................................................................................	22	1	13385.00	117.00	1737.00	0.00	11531.00
..............................................................................................TTGACGGAGAACTGATAAGGGC.........................................................................................	22	1	10106.00	99.00	26.00	0.00	9981.00
..............................................................................................TGGACGGAGAACTGATAAGTGC.........................................................................................	22	1	9502.00	522.00	293.00	0.00	8687.00
..............................................................................................TGGACGGAGAACTGATAAGGGCT........................................................................................	23	1	8784.00	205.00	1567.00	0.00	7012.00
..............................................................................................TGGACGGAGAACTGATAAGGGT.........................................................................................	22	1	8462.00	125.00	1326.00	0.00	7011.00
..............................................................................................TGGACGGAGAACTGATAAG............................................................................................	19	1	8458.00	25.00	2137.00	0.00	6296.00
..............................................................................................TGGACGGAGAACTGATAATGG..........................................................................................	21	1	6974.00	46.00	184.00	0.00	6744.00
..............................................................................................TGGACGTAGAACTGATAAGGGC.........................................................................................	22	1	6923.00	97.00	13.00	0.00	6813.00
..............................................................................................TGGACGGAGAACTGATAAGGGCA........................................................................................	23	1	6575.00	109.00	889.00	0.00	5577.00
..............................................................................................TGGACGGATAACTGATAAGGGC.........................................................................................	22	1	6332.00	121.00	29.00	0.00	6182.00
..............................................................................................TGTACGGAGAACTGATAAGGGC.........................................................................................	22	1	5903.00	68.00	24.00	0.00	5811.00
..............................................................................................TGGACTGAGAACTGATAAGGG..........................................................................................	21	1	4908.00	11.00	12.00	0.00	4885.00
..............................................................................................TGGACGGAGAACTTATAAGGGC.........................................................................................	22	1	4491.00	145.00	21.00	0.00	4325.00
..............................................................................................TGGACGGAGAACTGATAAGGTC.........................................................................................	22	1	4298.00	247.00	243.00	0.00	3808.00
..............................................................................................TTGACGGAGAACTGATAAGGG..........................................................................................	21	1	3386.00	12.00	17.00	0.00	3357.00
..............................................................................................TGGACGGAGAACTGATAAGTG..........................................................................................	21	1	2628.00	63.00	337.00	0.00	2228.00
..............................................................................................TGGACGTAGAACTGATAAGGG..........................................................................................	21	1	2346.00	7.00	13.00	0.00	2326.00
..............................................................................................TGTACGGAGAACTGATAAGGG..........................................................................................	21	1	2168.00	9.00	18.00	0.00	2141.00
..............................................................................................TGGACGGATAACTGATAAGGG..........................................................................................	21	1	2133.00	11.00	27.00	0.00	2095.00
.............................................................................................CTGGACGGAGAACTGATAAGGGC.........................................................................................	23	1	2009.00	64.00	116.00	0.00	1829.00
..............................................................................................TGGAAGGAGAACTGATAAGGGC.........................................................................................	22	1	1885.00	59.00	124.00	0.00	1702.00
..............................................................................................TGGACGGAGAAATGATAAGGGC.........................................................................................	22	1	1779.00	31.00	27.00	0.00	1721.00
..............................................................................................TGGACGGAGAACTGATAAGGT..........................................................................................	21	1	1736.00	15.00	255.00	0.00	1466.00
..............................................................................................TGGACGGAGAACTGATAAAGGC.........................................................................................	22	1	1566.00	321.00	249.00	0.00	996.00
..............................................................................................TGGATGGAGAACTGATAAGGGC.........................................................................................	22	1	1535.00	46.00	67.00	0.00	1422.00
..............................................................................................TGGACGGAGAACTTATAAGGG..........................................................................................	21	1	1518.00	12.00	18.00	0.00	1488.00
..............................................................................................TGGGCGGAGAACTGATAAGGGC.........................................................................................	22	1	1407.00	71.00	101.00	0.00	1235.00
..............................................................................................TGAACGGAGAACTGATAAGGGC.........................................................................................	22	1	1381.00	36.00	54.00	0.00	1291.00
..............................................................................................CGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	1279.00	68.00	74.00	0.00	1137.00
..............................................................................................TGGACGGAGAGCTGATAAGGGC.........................................................................................	22	1	1263.00	83.00	145.00	0.00	1035.00
..............................................................................................TGCACGGAGAACTGATAAGGGC.........................................................................................	22	1	1260.00	36.00	22.00	0.00	1202.00
..............................................................................................TGGACGGAGAACTGATAAGGCC.........................................................................................	22	1	1136.00	70.00	59.00	0.00	1007.00
..............................................................................................TGGACAGAGAACTGATAAGGGC.........................................................................................	22	1	1119.00	58.00	281.00	0.00	780.00
..............................................................................................TAGACGGAGAACTGATAAGGGC.........................................................................................	22	1	1116.00	63.00	387.00	0.00	666.00
..............................................................................................TGGACGGGGAACTGATAAGGGC.........................................................................................	22	1	1088.00	68.00	143.00	0.00	877.00
..............................................................................................TGGACGGAGGACTGATAAGGGC.........................................................................................	22	1	1050.00	95.00	176.00	0.00	779.00
..............................................................................................TGGACGGAGAACCGATAAGGGC.........................................................................................	22	1	1031.00	59.00	66.00	0.00	906.00
..............................................................................................TGGACGGAGAACTGATAACGGC.........................................................................................	22	1	999.00	204.00	102.00	0.00	693.00
..............................................................................................TGGACGGAGAACTGATAAGGGCC........................................................................................	23	1	998.00	56.00	94.00	0.00	848.00
..............................................................................................TGGACGGAGAACTGATAAGCGC.........................................................................................	22	1	966.00	297.00	146.00	0.00	523.00
..............................................................................................TGGACTGAGAACTGATAAGG...........................................................................................	20	1	958.00	1.00	4.00	0.00	953.00
..............................................................................................TGGACGGAGAACTGACAAGGGC.........................................................................................	22	1	928.00	64.00	67.00	0.00	797.00
..............................................................................................TGGACGGAGAACTGGTAAGGGC.........................................................................................	22	1	916.00	72.00	109.00	0.00	735.00
..............................................................................................TGGACGGAGCACTGATAAGGGC.........................................................................................	22	1	892.00	176.00	240.00	0.00	476.00
..............................................................................................TGGACGGAGAACTGATACGGG..........................................................................................	21	1	887.00	26.00	559.00	0.00	302.00
..............................................................................................TGGACGGAGAACTGCTAAGGGC.........................................................................................	22	1	847.00	120.00	227.00	0.00	500.00
..............................................................................................TGGACGGAGAACTGATAAGGAC.........................................................................................	22	1	811.00	122.00	76.00	0.00	613.00
..............................................................................................TGGACGGAGAACTGATAAGAGC.........................................................................................	22	1	787.00	157.00	179.00	0.00	451.00
..............................................................................................TGGACGGAGAACTGATAGGGGC.........................................................................................	22	1	772.00	37.00	109.00	0.00	626.00
..............................................................................................TGGCCGGAGAACTGATAAGGGC.........................................................................................	22	1	758.00	30.00	53.00	0.00	675.00
..............................................................................................TGGACGGAGAACTGATACGGGC.........................................................................................	22	1	757.00	74.00	254.00	0.00	429.00
...............................................................................................TGACGGAGAACTGATAAGGGC.........................................................................................	21	1	757.00	3.00	11.00	0.00	743.00
..............................................................................................TGGACGGAGACCTGATAAGGGC.........................................................................................	22	1	741.00	51.00	137.00	0.00	553.00
..............................................................................................TGGACGGAGAACTGATAAGGC..........................................................................................	21	1	720.00	7.00	70.00	0.00	643.00
..............................................................................................TTGACGGAGAACTGATAAGG...........................................................................................	20	1	719.00	1.00	3.00	0.00	715.00
.............................................................................................CTGGACGGAGAACTGATAAGGG..........................................................................................	22	1	714.00	6.00	99.00	0.00	609.00
..............................................................................................TCGACGGAGAACTGATAAGGGC.........................................................................................	22	1	707.00	44.00	19.00	0.00	644.00
..............................................................................................TGGAAGGAGAACTGATAAGGG..........................................................................................	21	1	699.00	4.00	93.00	0.00	602.00
..............................................................................................TGGACTGAGAACTGATAATGGC.........................................................................................	22	1	671.00	6.00	0.00	0.00	665.00
..............................................................................................TGGACGGAGAACTGATGAGGGC.........................................................................................	22	1	668.00	36.00	77.00	0.00	555.00
..............................................................................................TGGACGGAGAACTAATAAGGGC.........................................................................................	22	1	614.00	58.00	70.00	0.00	486.00
..............................................................................................TGGACGGAGAACTGATAATG...........................................................................................	20	1	603.00	6.00	49.00	0.00	548.00
..............................................................................................TGGACGGAGAACTGCTAAGGG..........................................................................................	21	1	598.00	15.00	316.00	0.00	267.00
..............................................................................................TGGACGGAGAAATGATAAGGG..........................................................................................	21	1	582.00	4.00	30.00	0.00	548.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTT.......................................................................................	24	1	573.00	14.00	71.00	0.00	488.00
..............................................................................................TAGACGGAGAACTGATAAGGG..........................................................................................	21	1	569.00	2.00	336.00	0.00	231.00
..............................................................................................TGGACGGAGAACTGATAAGGA..........................................................................................	21	1	562.00	8.00	116.00	0.00	438.00
..............................................................................................TGGACGGACAACTGATAAGGGC.........................................................................................	22	1	561.00	55.00	19.00	0.00	487.00
..............................................................................................TGGACGGAGAACTGATCAGGGC.........................................................................................	22	1	551.00	79.00	109.00	0.00	363.00
..............................................................................................TGGATGGAGAACTGATAAGGG..........................................................................................	21	1	539.00	5.00	59.00	0.00	475.00
..............................................................................................TGGACGGCGAACTGATAAGGGC.........................................................................................	22	1	530.00	37.00	62.00	0.00	431.00
..............................................................................................TGGACCGAGAACTGATAAGGGC.........................................................................................	22	1	526.00	44.00	12.00	0.00	470.00
..............................................................................................TGGACAGAGAACTGATAAGGG..........................................................................................	21	1	515.00	4.00	241.00	0.00	270.00
..............................................................................................TGGGCGGAGAACTGATAAGGG..........................................................................................	21	1	506.00	3.00	92.00	0.00	411.00
..............................................................................................TGGACGGAGAACTCATAAGGGC.........................................................................................	22	1	506.00	65.00	29.00	0.00	412.00
..............................................................................................TGGACGGAGAACTGATAAAGG..........................................................................................	21	1	494.00	30.00	251.00	0.00	213.00
..............................................................................................TGGACGCAGAACTGATAAGGGC.........................................................................................	22	1	489.00	38.00	14.00	0.00	437.00
..............................................................................................TGTACGGAGAACTGATAAGG...........................................................................................	20	1	481.00	2.00	7.00	0.00	472.00
..............................................................................................TGGACGGAGAACTGATCAGGG..........................................................................................	21	1	473.00	17.00	248.00	0.00	208.00
..............................................................................................TGGACGGAGGACTGATAAGGG..........................................................................................	21	1	464.00	12.00	165.00	0.00	287.00
..............................................................................................TGCACGGAGAACTGATAAGGG..........................................................................................	21	1	461.00	3.00	15.00	0.00	443.00
..............................................................................................GGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	461.00	75.00	27.00	0.00	359.00
..............................................................................................TGAACGGAGAACTGATAAGGG..........................................................................................	21	1	454.00	3.00	34.00	0.00	417.00
..............................................................................................TGGACGGAGAATTGATAAGGGC.........................................................................................	22	1	452.00	30.00	29.00	0.00	393.00
..............................................................................................TGGACGTAGAACTGATAAGG...........................................................................................	20	1	451.00	1.00	3.00	0.00	447.00
...............................................................................................GGACGGAGAACTGATAAGGGC.........................................................................................	21	1	433.00	13.00	47.00	0.00	373.00
..............................................................................................TGGACGGGGAACTGATAAGGG..........................................................................................	21	1	433.00	9.00	105.00	0.00	319.00
..............................................................................................CGGACGGAGAACTGATAAGGG..........................................................................................	21	1	425.00	7.00	59.00	0.00	359.00
..............................................................................................TGGACGGAGAGCTGATAAGGG..........................................................................................	21	1	412.00	6.00	103.00	0.00	303.00
..............................................................................................TGGACGGAGCACTGATAAGGG..........................................................................................	21	1	411.00	14.00	218.00	0.00	179.00
..............................................................................................TGGACGAAGAACTGATAAGGGC.........................................................................................	22	1	410.00	19.00	37.00	0.00	354.00
..............................................................................................TGGACGGAAAACTGATAAGGGC.........................................................................................	22	1	410.00	29.00	13.00	0.00	368.00
..............................................................................................TTGACTGAGAACTGATAAGGGC.........................................................................................	22	1	408.00	1.00	1.00	0.00	406.00
..............................................................................................TGGACGGATAACTGATAAGG...........................................................................................	20	1	407.00	1.00	10.00	0.00	396.00
..............................................................................................TGGACGGAGAACTGATAAGGGTT........................................................................................	23	1	401.00	2.00	64.00	0.00	335.00
..............................................................................................TGGACGGAGAACTGGTAAGGG..........................................................................................	21	1	389.00	4.00	85.00	0.00	300.00

droEug1

GT--AGGCTGA---T-------------CCCAAGGATTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGA-AAT-----------------------------CC-------------------------CCATG--

Size

Hit Count

Total Norm

droBia1

CT--AGGCTGA-----------------CCCAAGGGCTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGT-AAT-----------------------------TC-------------------------CCGTA--

Size

Hit Count

Total Norm

droTak1

CT--GGGCTGA-----------------CCCTCGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACGACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGT-AAT-----------------------------CC-------------------------CTATG--

Size

Hit Count

Total Norm

droEle1

CT--TGGCTGA-----------------CCTCAGGGTTGGTCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCATGTCATCAATA-GGT-----------------------------CT-------------------------ATAT---

Size

Hit Count

Total Norm

droRho1

CT--AGGCTGA-----------------CCTCAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATT-CAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAGTTCATCAA---------------------------------------------------------------------

Size

Hit Count

Total Norm

droFic1

CT--GGGCTGA-----------------TCGAAGGATTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTACAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAGA-AAT-----------------------------CC-------------------------CCATT--

Size

Hit Count

Total Norm

droKik1

CG--AGGCTAA---CCCTGCATAA------TGGGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCGTAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCGATTCATCAAGC-TGT-----------------------------TGCCACGAGGAAATCCCAGCAAATTACCCGTTCC

Size

Hit Count

Total Norm

droAna3

CCCAGTGCCGG--------------------CGAGTCCGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGGT-TGT--------------------------------------------------------CCATC--	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
..............................................................................................TGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	552017.00	145216.00	347714.00	51524.00	7563.00
..............................................................................................TGGACGGAGAACTGATAAGGG..........................................................................................	21	1	300446.00	78752.00	163660.00	56216.00	1818.00
..............................................................................................TGGACGGAGAACTGATAAGG...........................................................................................	20	1	134966.00	43491.00	62458.00	28326.00	691.00
..............................................................................................TGGACGGAGAACTGATAAGGGCT........................................................................................	23	1	27425.00	5417.00	19199.00	2691.00	118.00
..............................................................................................TGGACGGAGAACTGATAAG............................................................................................	19	1	24768.00	7028.00	9250.00	8419.00	71.00
..............................................................................................TGGACGGAGAACTGATAAGGGT.........................................................................................	22	1	23426.00	7618.00	12409.00	3361.00	38.00
..............................................................................................TGGACGGAGAACTGATAAGGGA.........................................................................................	22	1	11229.00	2490.00	6963.00	1651.00	125.00
..............................................................................................TGGACGGAGAACTGATAAGGGCA........................................................................................	23	1	9973.00	1309.00	7224.00	1052.00	388.00
..............................................................................................TGGACGGAGAACTGATAAGGT..........................................................................................	21	1	7326.00	2785.00	3707.00	824.00	10.00
..............................................................................................TGTACGGAGAACTGATAAGGGC.........................................................................................	22	1	6838.00	669.00	6110.00	40.00	19.00
..............................................................................................TGGACGGAGAACTGATAAGGTC.........................................................................................	22	1	6535.00	1962.00	4354.00	175.00	44.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTT.......................................................................................	24	1	6049.00	1765.00	3828.00	436.00	20.00
..............................................................................................TGGACGGAGAACTGATAAGGAC.........................................................................................	22	1	4123.00	1604.00	2423.00	76.00	20.00
..............................................................................................TGGACGGAGAACTGATAAGGGTT........................................................................................	23	1	3756.00	1115.00	2225.00	413.00	3.00
..............................................................................................TGTACGGAGAACTGATAAGGG..........................................................................................	21	1	3198.00	356.00	2811.00	27.00	4.00
..............................................................................................TGGACGGAGAACTGATAAGGA..........................................................................................	21	1	3059.00	1281.00	1521.00	249.00	8.00
..............................................................................................TGGACGTAGAACTGATAAGGGC.........................................................................................	22	1	3039.00	495.00	2494.00	35.00	15.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTT......................................................................................	25	1	2868.00	889.00	1816.00	162.00	1.00
..............................................................................................TGGACGGAGAACTGATAATGGC.........................................................................................	22	1	2737.00	410.00	2092.00	138.00	97.00
..............................................................................................TGGACTGAGAACTGATAAGGGC.........................................................................................	22	1	2307.00	295.00	1962.00	31.00	19.00
..............................................................................................TTGACGGAGAACTGATAAGGGC.........................................................................................	22	1	2282.00	519.00	1713.00	36.00	14.00
..............................................................................................TGGACGGAGAACTGATAAGGCC.........................................................................................	22	1	2227.00	873.00	1100.00	233.00	21.00
..............................................................................................TGGACGGAGAACTGATAAGGGTTT.......................................................................................	24	1	2168.00	632.00	1343.00	193.00	0.00
..............................................................................................TGGACGGAGAACTGATAAGTGC.........................................................................................	22	1	2049.00	298.00	1349.00	290.00	112.00
..............................................................................................TGGACGGAGAACTGATAAGT...........................................................................................	20	1	1752.00	609.00	915.00	225.00	3.00
..............................................................................................TGGACGGATAACTGATAAGGGC.........................................................................................	22	1	1625.00	269.00	1295.00	35.00	26.00
..............................................................................................TGGACGGAGAACTGATAATGG..........................................................................................	21	1	1551.00	222.00	1152.00	146.00	31.00
..............................................................................................TGGACGTAGAACTGATAAGGG..........................................................................................	21	1	1498.00	294.00	1155.00	44.00	5.00
..............................................................................................TGGACGGAGAACTGATAAGGC..........................................................................................	21	1	1444.00	489.00	698.00	252.00	5.00
..............................................................................................TGTACGGAGAACTGATAAGG...........................................................................................	20	1	1360.00	211.00	1130.00	19.00	0.00
..............................................................................................TGGACTGAGAACTGATAAGGG..........................................................................................	21	1	1232.00	188.00	996.00	45.00	3.00
..............................................................................................TTGACGGAGAACTGATAAGGG..........................................................................................	21	1	1143.00	279.00	819.00	39.00	6.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAT.......................................................................................	24	1	1128.00	196.00	835.00	81.00	16.00
..............................................................................................TGGACGGAGAACTGATAAGTG..........................................................................................	21	1	1094.00	165.00	560.00	335.00	34.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTTT.....................................................................................	26	1	1068.00	386.00	643.00	39.00	0.00
..............................................................................................TGGACGGAGAGCTGATAAGGGC.........................................................................................	22	1	1027.00	441.00	460.00	109.00	17.00
..............................................................................................TGGACGGAGAACTTATAAGGGC.........................................................................................	22	1	1020.00	241.00	710.00	44.00	25.00
..............................................................................................TGGACGGAGAAATGATAAGGGC.........................................................................................	22	1	971.00	617.00	277.00	68.00	9.00
..............................................................................................TAGACGGAGAACTGATAAGGGC.........................................................................................	22	1	896.00	388.00	396.00	100.00	12.00
..............................................................................................TGGACGGAGAACCGATAAGGGC.........................................................................................	22	1	874.00	436.00	368.00	66.00	4.00
..............................................................................................TGGGCGGAGAACTGATAAGGGC.........................................................................................	22	1	818.00	128.00	499.00	173.00	18.00
..............................................................................................TGGACGGATAACTGATAAGGG..........................................................................................	21	1	782.00	162.00	577.00	37.00	6.00
..............................................................................................TGGACGGAGGACTGATAAGGGC.........................................................................................	22	1	746.00	106.00	399.00	222.00	19.00
..............................................................................................TGGACGGAGAACAGATAAGGGC.........................................................................................	22	1	743.00	678.00	44.00	16.00	5.00
..............................................................................................TGGACGGGGAACTGATAAGGGC.........................................................................................	22	1	743.00	146.00	420.00	163.00	14.00
..............................................................................................TGGAAGGAGAACTGATAAGGGC.........................................................................................	22	1	734.00	71.00	318.00	335.00	10.00
..............................................................................................TGGATGGAGAACTGATAAGGGC.........................................................................................	22	1	717.00	148.00	478.00	82.00	9.00
..............................................................................................TGGACGGAGAACTGACAAGGGC.........................................................................................	22	1	713.00	364.00	230.00	106.00	13.00
..............................................................................................CGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	701.00	116.00	422.00	149.00	14.00
..............................................................................................TGGACGTAGAACTGATAAGG...........................................................................................	20	1	672.00	171.00	478.00	21.00	2.00
..............................................................................................TGGACGGAGAACTGATAAGCGC.........................................................................................	22	1	657.00	81.00	138.00	375.00	63.00
..............................................................................................TGGACGGAGAAGTGATAAGGGC.........................................................................................	22	1	649.00	575.00	25.00	43.00	6.00
..............................................................................................TGGACGGAGAACTGATAAAGGC.........................................................................................	22	1	638.00	121.00	345.00	91.00	81.00
..............................................................................................TGGACGGAGAACTGGTAAGGGC.........................................................................................	22	1	609.00	101.00	379.00	113.00	16.00
..............................................................................................TGGACGGAGAACTGATAACGGC.........................................................................................	22	1	607.00	84.00	180.00	282.00	61.00
..............................................................................................TGGACGGAGAACTGATAAGCG..........................................................................................	21	1	592.00	67.00	65.00	440.00	20.00
..............................................................................................TGGACGGAGAGCTGATAAGGG..........................................................................................	21	1	565.00	196.00	219.00	145.00	5.00
..............................................................................................TGGACGGAGGACTGATAAGGG..........................................................................................	21	1	563.00	80.00	196.00	282.00	5.00
..............................................................................................TGGACGGAGAACTGATTT.............................................................................................	18	1	557.00	10.00	340.00	207.00	0.00
..............................................................................................TGGACGGAGAAATGATAAGGG..........................................................................................	21	1	548.00	330.00	139.00	76.00	3.00
..............................................................................................TGGACAGAGAACTGATAAGGGC.........................................................................................	22	1	543.00	92.00	341.00	97.00	13.00
..............................................................................................TGGACGGAGAACTGATAA.............................................................................................	18	1	535.00	20.00	227.00	288.00	0.00
..............................................................................................TGGACGGAGAACTGATAAGGGAA........................................................................................	23	1	535.00	81.00	347.00	74.00	33.00
..............................................................................................TGGACGGAGAATTGATAAGGGC.........................................................................................	22	1	531.00	344.00	147.00	38.00	2.00
..............................................................................................TCGACGGAGAACTGATAAGGGC.........................................................................................	22	1	523.00	243.00	218.00	50.00	12.00
..............................................................................................TTGACGGAGAACTGATAAGG...........................................................................................	20	1	513.00	159.00	334.00	18.00	2.00
...............................................................................................TGACGGAGAACTGATAAGGGC.........................................................................................	21	1	489.00	106.00	373.00	8.00	2.00
..............................................................................................TGGACGGAGAACTGATAAGGGAT........................................................................................	23	1	489.00	116.00	334.00	36.00	3.00
..............................................................................................TGGACTGAGAACTGATAAGG...........................................................................................	20	1	488.00	104.00	362.00	20.00	2.00
..............................................................................................TGGACGGGGAACTGATAAGGG..........................................................................................	21	1	486.00	58.00	198.00	228.00	2.00
..............................................................................................TGGAAGGAGAACTGATAAGGG..........................................................................................	21	1	484.00	40.00	129.00	311.00	4.00
..............................................................................................TAGACGGAGAACTGATAAGGG..........................................................................................	21	1	475.00	196.00	167.00	111.00	1.00
..............................................................................................TGGACGGAGAACTGAGAAGGGC.........................................................................................	22	1	468.00	264.00	9.00	180.00	15.00
..............................................................................................TGGACGGAGAACTGATAAGAGC.........................................................................................	22	1	467.00	90.00	246.00	102.00	29.00
..............................................................................................TGGACGAAGAACTGATAAGGGC.........................................................................................	22	1	466.00	173.00	250.00	41.00	2.00
..............................................................................................TGCACGGAGAACTGATAAGGGC.........................................................................................	22	1	460.00	137.00	246.00	62.00	15.00
..............................................................................................TGGACGGAGAACTGATAATG...........................................................................................	20	1	458.00	67.00	305.00	73.00	13.00
..............................................................................................TGGACGGAGAACTTATAAGGG..........................................................................................	21	1	446.00	118.00	290.00	30.00	8.00
..............................................................................................TGGACGGAGAACTGATAGGGGC.........................................................................................	22	1	436.00	91.00	258.00	82.00	5.00
..............................................................................................TGGACGGAGAACTGATGAGGGC.........................................................................................	22	1	431.00	89.00	281.00	54.00	7.00
..............................................................................................TGGACGGAGAACTGGTAAGGG..........................................................................................	21	1	430.00	70.00	184.00	174.00	2.00
..............................................................................................TGGACGGATAACTGATAAGG...........................................................................................	20	1	427.00	116.00	293.00	17.00	1.00
..............................................................................................TGGACGGAGAACCGATAAGGG..........................................................................................	21	1	427.00	223.00	148.00	53.00	3.00
..............................................................................................TGGACGGAGAACTGATAGGGG..........................................................................................	21	1	424.00	57.00	152.00	212.00	3.00
..............................................................................................GGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	421.00	85.00	79.00	246.00	11.00
..............................................................................................TGGACGGAGAACAGATAAGGG..........................................................................................	21	1	418.00	395.00	7.00	15.00	1.00
..............................................................................................TGGACGGAGACCTGATAAGGGC.........................................................................................	22	1	406.00	224.00	87.00	83.00	12.00
..............................................................................................TGGACGGAGAACTGATAACGG..........................................................................................	21	1	405.00	42.00	65.00	286.00	12.00
..............................................................................................TGGACGGAGAACTGACAAGGG..........................................................................................	21	1	403.00	181.00	120.00	101.00	1.00
..............................................................................................AGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	401.00	91.00	71.00	235.00	4.00
..............................................................................................TGGGCGGAGAACTGATAAGGG..........................................................................................	21	1	397.00	55.00	207.00	131.00	4.00
..............................................................................................TGGATGGAGAACTGATAAGGG..........................................................................................	21	1	395.00	61.00	240.00	93.00	1.00
..............................................................................................TGGACGGAGCACTGATAAGGG..........................................................................................	21	1	394.00	33.00	63.00	282.00	16.00
..............................................................................................TGGACGGAGAACTGATACGGG..........................................................................................	21	1	391.00	45.00	70.00	263.00	13.00
..............................................................................................CGGACGGAGAACTGATAAGGG..........................................................................................	21	1	387.00	60.00	186.00	138.00	3.00
..............................................................................................TGGACGGAGAACTAATAAGGGC.........................................................................................	22	1	377.00	169.00	139.00	63.00	6.00
..............................................................................................TGGACGGAGCACTGATAAGGGC.........................................................................................	22	1	374.00	37.00	86.00	206.00	45.00
..............................................................................................TGTACGGAGAACTGATAAGGGCT........................................................................................	23	1	373.00	25.00	346.00	2.00	0.00
..............................................................................................TGGACGGAGAACTCATAAGGGC.........................................................................................	22	1	367.00	202.00	86.00	60.00	19.00
..............................................................................................TGGACGGAGAAGTGATAAGGG..........................................................................................	21	1	360.00	312.00	10.00	38.00	0.00
..............................................................................................TGAACGGAGAACTGATAAGGGC.........................................................................................	22	1	359.00	72.00	212.00	69.00	6.00

droBip1

CA--AGTGTAT-----------------CTGAGAGCGCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGGT-TGT--------CAATTCATCAGTTGGGAGTTTCC-------------------------CCAAA--

Size

Hit Count

Total Norm

dp4

----GGGTCGG----CCCGGGGAC------TCCGGGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------------------------------------------	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
..............................................................................................TGGACGGAGAACTGATAAGGGC.........................................................................................	22	2	114077.00	41137.00	32106.50	39472.00	1361.50
..............................................................................................TGGACGGAGAACTGATAAGGG..........................................................................................	21	2	70581.00	26631.00	3520.00	40276.50	153.50
..............................................................................................TGGACGGAGAACTGATAAGG...........................................................................................	20	2	22526.00	12524.50	479.50	9430.50	91.50
..............................................................................................TGGACGGAGAACTGATAAGGGT.........................................................................................	22	2	5245.50	2809.50	129.50	2281.50	25.00
..............................................................................................TGGACGGAGAACTGATAAG............................................................................................	19	2	3635.00	1380.50	20.50	2159.50	74.50
..............................................................................................TGGACGGAGAACTGATAAGGGCT........................................................................................	23	2	2076.50	966.00	166.00	906.50	38.00
..............................................................................................TGGACGGAGAACTGATAAGGGA.........................................................................................	22	2	1871.00	485.50	115.50	1256.50	13.50
..............................................................................................TGGACGGAGAACTGATAAGGT..........................................................................................	21	2	1212.50	833.00	4.50	368.00	7.00
..............................................................................................TGGACGGAGAACTGATAAGGGCA........................................................................................	23	2	973.50	568.50	52.50	330.00	22.50
..............................................................................................TGGACGGAGAACTGATAAGGGTT........................................................................................	23	2	502.00	323.50	0.50	169.50	8.50
..............................................................................................TGGACGGAGAACTGATAAGGGCTT.......................................................................................	24	2	430.00	360.50	10.00	49.00	10.50
..............................................................................................TGGAAGGAGAACTGATAAGGGC.........................................................................................	22	2	425.50	12.50	254.50	158.50	0.00
..............................................................................................TGGACGGAGCACTGATAAGGGC.........................................................................................	22	2	290.00	17.50	215.00	57.50	0.00
..............................................................................................TGGACGGAGAACTGATAGGGGC.........................................................................................	22	2	241.50	51.00	30.00	156.50	4.00
..............................................................................................TGGACGGAGAACTGATAAGGGCC........................................................................................	23	2	241.00	144.00	38.00	56.00	3.00
..............................................................................................TGGACGGAGGACTGATAAGGGC.........................................................................................	22	2	207.00	33.50	113.00	60.50	0.00
..............................................................................................TGGACGGAGAACTGATAAGCGC.........................................................................................	22	2	203.00	19.50	67.00	115.00	1.50
..............................................................................................TGGACGGAGAACTGATAAGGGCTTT......................................................................................	25	2	199.50	176.50	4.00	6.00	13.00
..............................................................................................TGGACGGAGAACTGCTAAGGGC.........................................................................................	22	2	196.00	22.00	96.00	78.00	0.00
..............................................................................................TGGACGGAGAACTGATAAGGGTTT.......................................................................................	24	2	196.00	172.00	0.50	19.50	4.00
..............................................................................................TGGACGGAGAACTGATAAGGCC.........................................................................................	22	2	189.50	127.50	14.50	47.00	0.50
..............................................................................................TGGACGGAGAACTGATAGGGG..........................................................................................	21	2	183.50	40.00	4.50	139.00	0.00
..............................................................................................TGGACGGAGTACTGATAAGGGC.........................................................................................	22	2	182.50	7.00	119.00	55.50	1.00
..............................................................................................TGGACGGAGAACTGATAAAGGC.........................................................................................	22	2	179.00	41.00	62.50	75.00	0.50
.............................................................................................CTGGACGGAGAACTGATAAGGGC.........................................................................................	23	2	177.50	61.50	59.00	57.00	0.00
..............................................................................................TAGACGGAGAACTGATAAGGGC.........................................................................................	22	2	171.00	23.00	61.50	86.00	0.50
..............................................................................................TGGACGGAGAGCTGATAAGGGC.........................................................................................	22	2	170.50	38.50	70.50	61.00	0.50
..............................................................................................TGGACGGGGAACTGATAAGGGC.........................................................................................	22	2	168.50	50.00	55.00	62.50	1.00
..............................................................................................TGAACGGAGAACTGATAAGGGC.........................................................................................	22	2	165.00	12.50	17.50	135.00	0.00
..............................................................................................TGGACGGAGAACTGATAAGGA..........................................................................................	21	2	164.50	82.50	1.00	76.50	4.50
..............................................................................................TGGACGGAGAACTGATAAGTGC.........................................................................................	22	2	159.00	11.00	58.50	88.00	1.50
..............................................................................................TGGGCGGAGAACTGATAAGGGC.........................................................................................	22	2	153.50	36.00	51.50	64.00	2.00
..............................................................................................TGAACGGAGAACTGATAAGGG..........................................................................................	21	2	151.00	5.50	2.50	143.00	0.00
..............................................................................................TGGACGGAGAACTGATAAGT...........................................................................................	20	2	149.50	98.50	1.00	37.00	13.00
..............................................................................................TGGACGGAGAACTGGTAAGGGC.........................................................................................	22	2	149.00	34.00	66.50	48.00	0.50
..............................................................................................TGGACGGAGAACTGCTAAGGG..........................................................................................	21	2	148.50	23.00	12.00	113.50	0.00
..............................................................................................TGGAAGGAGAACTGATAAGGG..........................................................................................	21	2	148.00	6.50	26.50	115.00	0.00
..............................................................................................TGGACGGAGAACTGATAAGCG..........................................................................................	21	2	143.00	15.50	10.50	117.00	0.00
..............................................................................................TGGACAGAGAACTGATAAGGGC.........................................................................................	22	2	142.00	23.50	54.00	64.50	0.00
..............................................................................................TGGACGGAGAACTGATAACGGC.........................................................................................	22	2	139.00	24.00	44.00	71.00	0.00
..............................................................................................TGCACGGAGAACTGATAAGGGC.........................................................................................	22	2	137.00	25.00	7.00	105.00	0.00
..............................................................................................TGGACGGAGCACTGATAAGGG..........................................................................................	21	2	137.00	15.50	26.50	95.00	0.00
..............................................................................................CGGACGGAGAACTGATAAGGGC.........................................................................................	22	2	133.50	38.00	42.50	51.50	1.50
..............................................................................................TGGACGGAGAACTGATACGGG..........................................................................................	21	2	132.00	20.00	16.50	95.50	0.00
..............................................................................................TGGATGGAGAACTGATAAGGGC.........................................................................................	22	2	130.50	32.00	53.00	45.50	0.00
..............................................................................................TGCACGGAGAACTGATAAGGG..........................................................................................	21	2	127.00	12.50	2.00	112.50	0.00
..............................................................................................TGGACGGAGAACTGATAAGAGC.........................................................................................	22	2	123.00	15.00	41.50	66.50	0.00
..............................................................................................TGGACGGAGAACTGATCAGGG..........................................................................................	21	2	123.00	16.50	15.50	91.00	0.00
..............................................................................................TGGACGGAGGACTGATAAGGG..........................................................................................	21	2	121.50	24.50	16.00	81.00	0.00
..............................................................................................TGGACGGAGAACTGATAAGTG..........................................................................................	21	2	121.00	5.00	10.00	106.00	0.00
..............................................................................................TGGACGGAGAACTGATACGGGC.........................................................................................	22	2	120.00	16.50	49.00	54.50	0.00
..............................................................................................TGGACGGAGAACTGACAAGGGC.........................................................................................	22	2	118.50	26.50	39.50	52.00	0.50
.............................................................................................CTGGACGGAGAACTGATAAGGG..........................................................................................	22	2	116.00	42.00	6.50	67.50	0.00
..............................................................................................TGGACGGAGAACCGATAAGGGC.........................................................................................	22	2	114.50	47.00	34.50	32.00	1.00
..............................................................................................TGGACGGAGAACTGATAAGGGG.........................................................................................	22	2	113.00	7.50	75.00	30.00	0.50
..............................................................................................TGGACGGGGAACTGATAAGGG..........................................................................................	21	2	111.50	29.00	7.50	75.00	0.00
..............................................................................................TGGACGGAGAACTGATAA.............................................................................................	18	2	111.00	2.00	3.00	57.50	48.50
..............................................................................................TGGACGGAGAAATGATAAGGGC.........................................................................................	22	2	110.50	21.00	62.00	27.00	0.50
..............................................................................................TGGACGGAGAACTGATAATGGC.........................................................................................	22	2	109.00	16.00	50.50	41.50	1.00
..............................................................................................TGGACGGAGAACTGGTAAGGG..........................................................................................	21	2	108.50	23.50	8.00	77.00	0.00
..............................................................................................TGGACGGAGTACTGATAAGGG..........................................................................................	21	2	107.00	3.00	19.50	84.50	0.00
..............................................................................................TGGACGGAGAACTGATGAGGGC.........................................................................................	22	2	105.50	23.00	35.00	47.50	0.00
..............................................................................................TGGACGGAGAACTGATCAGGGC.........................................................................................	22	2	105.50	15.00	51.50	38.50	0.50
..............................................................................................TGGACGGAGAACTGATAAGGC..........................................................................................	21	2	105.00	38.00	4.50	62.00	0.50
..............................................................................................TGTACGGAGAACTGATAAGGGC.........................................................................................	22	2	104.00	39.00	7.50	56.00	1.50
..............................................................................................TGGACGGAGAGCTGATAAGGG..........................................................................................	21	2	100.00	25.00	9.50	65.50	0.00
..............................................................................................TGGACGGAGAACTGATAAAGG..........................................................................................	21	2	97.50	12.50	8.00	76.50	0.50
..............................................................................................TAGACGGAGAACTGATAAGGG..........................................................................................	21	2	97.00	12.50	5.00	79.50	0.00
..............................................................................................GGGACGGAGAACTGATAAGGGC.........................................................................................	22	2	89.00	6.50	44.00	38.50	0.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTTT.....................................................................................	26	2	88.50	82.00	0.50	1.50	4.50
..............................................................................................TGGACGGAGAACTGATAAGGAC.........................................................................................	22	2	86.00	17.00	21.50	36.00	11.50
..............................................................................................TGGACAGAGAACTGATAAGGG..........................................................................................	21	2	85.50	11.50	3.00	71.00	0.00
..............................................................................................TGGACGGAGACCTGATAAGGGC.........................................................................................	22	2	84.00	22.50	35.00	26.00	0.50
..............................................................................................AGGACGGAGAACTGATAAGGGC.........................................................................................	22	2	83.50	13.00	31.00	38.50	1.00
..............................................................................................TGGACGGAGAACTGAGAAGGGC.........................................................................................	22	2	82.00	1.50	45.50	35.00	0.00
..............................................................................................TGGGCGGAGAACTGATAAGGG..........................................................................................	21	2	81.00	22.00	6.00	53.00	0.00
.......................................................CCTTATCATTCTCGCGCCCCGT................................................................................................................................	22	2	81.00	37.00	32.50	11.50	0.00
..............................................................................................TGGACGGAGAACTGATAAGGTC.........................................................................................	22	2	80.50	19.50	19.00	41.50	0.50
..............................................................................................CGGACGGAGAACTGATAAGGG..........................................................................................	21	2	80.00	25.50	4.00	50.50	0.00
..............................................................................................TGGACGGAGAACTAATAAGGGC.........................................................................................	22	2	80.00	17.00	26.50	36.50	0.00
..............................................................................................TGGACGGAGAACTGATAACGG..........................................................................................	21	2	78.50	15.50	4.50	58.50	0.00
..............................................................................................TGGACGGAGAACTGATAAGAG..........................................................................................	21	2	77.00	11.00	4.50	61.50	0.00
..............................................................................................TGGATGGAGAACTGATAAGGG..........................................................................................	21	2	75.00	24.00	6.50	44.50	0.00
..............................................................................................TGTACGGAGAACTGATAAGGG..........................................................................................	21	2	70.50	21.00	0.00	49.50	0.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAT.......................................................................................	24	2	69.50	52.00	1.00	14.00	2.50
..............................................................................................TGGACGGAGAACTGATAATGG..........................................................................................	21	2	69.00	9.50	5.50	54.00	0.00
..............................................................................................TGGACGGAGAACTGATAAGGGCCT.......................................................................................	24	2	68.50	50.50	3.50	13.50	1.00
..............................................................................................TGGCCGGAGAACTGATAAGGGC.........................................................................................	22	2	67.50	14.00	22.00	31.50	0.00
..............................................................................................TGGACGGAGAACTGATGAGGG..........................................................................................	21	2	65.00	16.50	2.50	46.00	0.00
..............................................................................................TGGACGGAGAACTGATATGGG..........................................................................................	21	2	65.00	5.50	2.00	57.50	0.00
..............................................................................................TGGACGGAGAACTGACAAGGG..........................................................................................	21	2	63.50	17.50	2.50	43.50	0.00
..............................................................................................TGGACGGAGAACTCATAAGGGC.........................................................................................	22	2	61.50	9.00	17.00	35.50	0.00
...............................................................................................GGACGGAGAACTGATAAGGGC.........................................................................................	21	2	58.50	21.50	13.50	23.00	0.50
..............................................................................................TGGACGGAGAATTGATAAGGGC.........................................................................................	22	2	58.50	20.50	24.00	14.00	0.00
..............................................................................................TGGACGGCGAACTGATAAGGGC.........................................................................................	22	2	57.50	12.50	25.00	20.00	0.00
..............................................................................................TGGACGGAGAACCGATAAGGG..........................................................................................	21	2	56.00	22.00	2.50	31.00	0.50
..............................................................................................GGGACGGAGAACTGATAAGGG..........................................................................................	21	2	55.00	4.00	5.50	45.50	0.00
..............................................................................................TGGACGGAGACCTGATAAGGG..........................................................................................	21	2	54.00	15.00	2.50	36.50	0.00
.............................................................................................CTGGACGGAGAACTGATAAGG...........................................................................................	21	2	54.00	27.00	1.50	25.50	0.00
..............................................................................................TGGACGGTGAACTGATAAGGGC.........................................................................................	22	2	53.00	6.50	30.50	16.00	0.00
..............................................................................................TCGACGGAGAACTGATAAGGGC.........................................................................................	22	2	51.50	19.00	10.50	21.50	0.50

droPer1

----GGGTCGG----CCCGGGGAC------TCCGGGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------------------------------------------	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
..............................................................................................TGGACGGAGAACTGATAAGGGC.........................................................................................	22	2	193055.00	72407.50	6818.00	47497.50	52090.00	14242.00
..............................................................................................TGGACGGAGAACTGATAAGGG..........................................................................................	21	2	151961.00	38003.50	987.50	47562.50	64867.50	540.00
..............................................................................................TGGACGGAGAACTGATAAGG...........................................................................................	20	2	60050.00	26346.00	226.00	10362.00	22981.50	134.50
..............................................................................................TGGACGGAGAACTGATAAGGGT.........................................................................................	22	2	9721.00	4062.00	37.50	2024.00	3583.50	14.00
..............................................................................................TGGACGGAGAACTGATAAG............................................................................................	19	2	7892.00	1890.50	10.00	1749.00	4125.00	117.50
..............................................................................................TGGACGGAGAACTGATAAGGGCT........................................................................................	23	2	4639.50	1802.50	53.00	1016.50	1626.50	141.00
..............................................................................................TGGACGGAGAACTGATAAGGGA.........................................................................................	22	2	4458.00	1239.50	23.50	1333.50	1838.50	23.00
..............................................................................................TGGACGGAGAACTGATAAGGGCA........................................................................................	23	2	2727.50	950.00	21.50	434.50	1143.50	178.00
..............................................................................................TGGACGGAGAACTGATAAGGT..........................................................................................	21	2	2357.50	1353.50	2.00	272.00	729.50	0.50
..............................................................................................TGGACGGAGAACTGATAAGGGCTT.......................................................................................	24	2	856.00	595.00	4.50	40.50	164.00	52.00
..............................................................................................TGGACGGAGAACTGATAAGGGTT........................................................................................	23	2	732.00	401.50	1.00	111.00	216.00	2.50
..............................................................................................TGGACGGAGAACTGATAGGGG..........................................................................................	21	2	680.00	98.50	0.50	173.00	406.50	1.50
..............................................................................................TGGACGGAGAACTGATAAGCG..........................................................................................	21	2	671.00	16.00	2.00	176.50	476.50	0.00
..............................................................................................TGGACGGAGAACTGATAGGGGC.........................................................................................	22	2	645.00	145.50	5.00	231.00	249.00	14.50
..............................................................................................TGGAAGGAGAACTGATAAGGGC.........................................................................................	22	2	604.00	9.00	23.00	129.00	442.50	0.50
..............................................................................................TGGAAGGAGAACTGATAAGGG..........................................................................................	21	2	548.00	2.50	2.00	100.50	443.00	0.00
..............................................................................................TGGACGGAGAACTGATAAGCGC.........................................................................................	22	2	536.00	19.50	8.50	160.50	334.00	13.50
..............................................................................................TGGACGGAGAACTGATAAGGA..........................................................................................	21	2	491.50	255.00	0.50	93.50	140.00	2.50
..............................................................................................TGGACGGAGGACTGATAAGGG..........................................................................................	21	2	461.00	30.00	3.00	66.50	361.00	0.50
..............................................................................................TGGACGGAGAACTGATAAGTG..........................................................................................	21	2	428.00	16.50	2.00	84.50	324.50	0.50
..............................................................................................TGGACGGAGAACTGATACGGG..........................................................................................	21	2	425.00	11.00	2.50	138.50	273.00	0.00
..............................................................................................TGGACGGAGAACTGCTAAGGG..........................................................................................	21	2	413.50	5.00	8.50	141.50	258.50	0.00
..............................................................................................TGGACGGAGCACTGATAAGGG..........................................................................................	21	2	407.00	9.50	3.00	97.00	297.50	0.00
..............................................................................................TGGACGGAGAACTGATAAGGC..........................................................................................	21	2	394.00	55.00	1.00	70.50	267.50	0.00
..............................................................................................TGGACAGAGAACTGATAAGGGC.........................................................................................	22	2	391.00	39.50	7.50	297.50	42.50	4.00
..............................................................................................TGGACGGAGAACTGATAAGGAC.........................................................................................	22	2	387.50	78.00	6.50	57.50	59.00	186.50
..............................................................................................TGGACGGAGAACTGATAAGGTC.........................................................................................	22	2	382.50	76.00	5.50	53.50	239.00	8.50
..............................................................................................TGGACGGAGGACTGATAAGGGC.........................................................................................	22	2	380.00	61.00	15.00	69.50	226.50	8.00
..............................................................................................TGGACGGAGAACTGATAAGTGC.........................................................................................	22	2	375.00	44.00	8.00	76.00	230.00	17.00
..............................................................................................TGGACAGAGAACTGATAAGGG..........................................................................................	21	2	369.00	19.50	1.50	298.00	50.00	0.00
..............................................................................................TGGACGGGGAACTGATAAGGG..........................................................................................	21	2	358.00	39.50	3.00	71.50	242.50	1.50
..............................................................................................TGGACGGAGAACTGATAAGGGCTTT......................................................................................	25	2	352.50	287.50	2.00	4.50	33.50	25.00
..............................................................................................TGGACGGAGAACTGATAACGG..........................................................................................	21	2	331.00	4.00	0.00	79.50	246.50	1.00
..............................................................................................TGGACGGGGAACTGATAAGGGC.........................................................................................	22	2	329.00	74.00	8.50	71.00	160.00	15.50
..............................................................................................TGGACGGAGAGCTGATAAGGGC.........................................................................................	22	2	328.00	84.00	12.50	72.00	147.50	12.00
..............................................................................................TGGACGGAGAACTGATAAGGCC.........................................................................................	22	2	321.50	69.00	4.00	50.50	191.00	7.00
..............................................................................................TGGACGGAGAACTGATAA.............................................................................................	18	2	321.50	3.50	2.00	43.00	147.00	126.00
..............................................................................................TGGGCGGAGAACTGATAAGGGC.........................................................................................	22	2	315.00	41.00	6.00	66.50	175.50	26.00
..............................................................................................TGGACGGAGAACTGATAACGGC.........................................................................................	22	2	311.00	14.50	6.50	80.00	206.00	4.00
..............................................................................................TGGACGGAGAACTGATAAGGGCC........................................................................................	23	2	308.50	106.00	7.50	52.00	100.00	43.00
..............................................................................................TGGACGGAGAACTGGTAAGGG..........................................................................................	21	2	308.00	32.00	4.50	64.50	206.50	0.50
..............................................................................................TGGACGGAGAGCTGATAAGGG..........................................................................................	21	2	293.50	48.50	4.00	65.50	174.50	1.00
..............................................................................................TGGACGGAGTACTGATAAGGG..........................................................................................	21	2	291.50	5.00	6.00	48.00	232.00	0.50
..............................................................................................TGGACGGAGAACTGATAATGGC.........................................................................................	22	2	283.50	80.00	5.50	49.00	142.50	6.50
..............................................................................................CGGACGGAGAACTGATAAGGGC.........................................................................................	22	2	276.50	69.00	9.00	48.50	138.50	11.50
..............................................................................................TGGACGGAGCACTGATAAGGGC.........................................................................................	22	2	276.00	9.00	24.00	62.50	179.00	1.50
..............................................................................................TGGACGGAGAACTGATCAGGG..........................................................................................	21	2	270.00	6.00	8.50	92.00	163.50	0.00
..............................................................................................TGGGCGGAGAACTGATAAGGG..........................................................................................	21	2	261.00	18.50	1.00	50.00	191.00	0.50
..............................................................................................TGGACGGAGAACTGATAAAGGC.........................................................................................	22	2	261.00	70.00	18.00	125.50	46.00	1.50
..............................................................................................TGGACGGAGAACTGATAAGAG..........................................................................................	21	2	260.00	16.00	1.00	160.00	83.00	0.00
..............................................................................................TGGACGGAGAACTGGTAAGGGC.........................................................................................	22	2	256.50	64.00	9.00	58.50	118.00	7.00
..............................................................................................CGGACGGAGAACTGATAAGGG..........................................................................................	21	2	255.50	29.00	3.00	64.00	159.00	0.50
..............................................................................................TGGACGGAGAACTGATAATGG..........................................................................................	21	2	250.50	38.50	0.00	53.50	158.50	0.00
..............................................................................................TAGACGGAGAACTGATAAGGGC.........................................................................................	22	2	244.50	46.00	11.50	95.50	82.00	9.50
..............................................................................................AGGACGGAGAACTGATAAGGGC.........................................................................................	22	2	242.50	27.00	4.50	48.50	155.00	7.50
..............................................................................................AGGACGGAGAACTGATAAGGG..........................................................................................	21	2	239.50	14.50	1.00	44.50	178.00	1.50
..............................................................................................TGGACGGAGAACTGATAAGAGC.........................................................................................	22	2	238.00	30.00	9.50	130.50	66.00	2.00
..............................................................................................TGTACGGAGAACTGATAAGGGC.........................................................................................	22	2	230.00	166.00	1.50	21.50	32.50	8.50
..............................................................................................TGGACGGAGAACTGATATGGG..........................................................................................	21	2	227.00	9.50	0.00	33.50	184.00	0.00
..............................................................................................TGGACGGAGAACTGCTAAGGGC.........................................................................................	22	2	226.00	5.00	25.50	75.00	118.50	2.00
.............................................................................................CTGGACGGAGAACTGATAAGGGC.........................................................................................	23	2	225.50	11.50	8.50	81.50	121.50	2.50
..............................................................................................TTGACGGAGAACTGATAAGGGC.........................................................................................	22	2	222.50	124.00	1.50	15.00	36.00	46.00
.............................................................................................CTGGACGGAGAACTGATAAGGG..........................................................................................	22	2	214.50	5.00	3.00	74.50	132.00	0.00
..............................................................................................TGGACGGAGAACTGATAAAGG..........................................................................................	21	2	214.00	17.00	3.00	127.50	66.50	0.00
..............................................................................................TAGACGGAGAACTGATAAGGG..........................................................................................	21	2	213.50	20.50	2.50	97.50	92.50	0.50
..............................................................................................TGGATGGAGAACTGATAAGGGC.........................................................................................	22	2	212.50	69.50	8.50	55.50	67.50	11.50
..............................................................................................TGGACGGAGAACTGATAAGT...........................................................................................	20	2	212.50	127.50	0.50	15.00	69.50	0.00
..............................................................................................TGGACGGAGAACTGACAAGGGC.........................................................................................	22	2	210.00	35.50	7.00	54.50	109.50	3.50
..............................................................................................TGGACGGAGTACTGATAAGGGC.........................................................................................	22	2	199.50	6.50	23.50	31.00	137.50	1.00
..............................................................................................TGGACGGAGAACTGATGAGGG..........................................................................................	21	2	194.00	16.50	0.50	73.50	103.00	0.50
..............................................................................................TGGACGGAGAACTGAGAAGGGC.........................................................................................	22	2	193.50	7.00	3.50	29.50	151.50	2.00
..............................................................................................TGGACGGAGGACTGATAAGG...........................................................................................	20	2	191.50	24.00	0.00	16.00	151.50	0.00
..............................................................................................TGGACGGAGAACTGACAAGGG..........................................................................................	21	2	189.50	21.00	1.50	49.00	117.50	0.50
..............................................................................................TGGACGGAGAACCGATAAGGGC.........................................................................................	22	2	186.00	41.00	7.00	50.00	70.00	18.00
..............................................................................................TGGACGGAGAACTGATAAGGGTTT.......................................................................................	24	2	184.00	144.00	0.00	4.50	34.00	1.50
..............................................................................................TGGAAGGAGAACTGATAAGG...........................................................................................	20	2	182.50	3.00	0.50	28.50	150.50	0.00
..............................................................................................TGGACGGAGAACTGAGAAGGG..........................................................................................	21	2	181.50	1.00	0.50	21.50	158.50	0.00
..............................................................................................TGGACGGAGAACTGATAGGG...........................................................................................	20	2	176.00	37.50	0.50	33.50	104.50	0.00
..............................................................................................GGGACGGAGAACTGATAAGGGC.........................................................................................	22	2	175.00	11.50	10.50	39.00	112.50	1.50
..............................................................................................TGGACGGAGAACTGATACGGGC.........................................................................................	22	2	173.00	7.00	6.00	63.50	95.00	1.50
..............................................................................................TGGACGGAGAACTGATGAGGGC.........................................................................................	22	2	169.00	32.50	7.50	56.00	63.00	10.00
..............................................................................................GGGACGGAGAACTGATAAGGG..........................................................................................	21	2	168.00	6.50	0.50	24.50	136.50	0.00
..............................................................................................TGGATGGAGAACTGATAAGGG..........................................................................................	21	2	168.00	35.00	1.00	48.50	83.50	0.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTTT.....................................................................................	26	2	168.00	135.50	0.50	0.50	13.00	18.50
..............................................................................................TGGACGGAGAACTGATAAGGGCAT.......................................................................................	24	2	165.50	80.00	0.50	11.50	61.50	12.00
..............................................................................................TGGACTGAGAACTGATAAGGGC.........................................................................................	22	2	159.00	64.00	3.00	60.50	22.00	9.50
..............................................................................................TGGACGGAGAACTGATAAGGGG.........................................................................................	22	2	158.50	20.00	15.50	31.00	72.50	19.50
..............................................................................................TGGACGGAGAACTGTTAAGGG..........................................................................................	21	2	157.50	4.50	0.00	28.00	125.00	0.00
..............................................................................................TGAACGGAGAACTGATAAGGGC.........................................................................................	22	2	155.50	30.50	5.50	33.00	85.00	1.50
..............................................................................................TGGACGGAGAACTAATAAGGGC.........................................................................................	22	2	147.50	16.00	8.50	62.50	58.50	2.00
..............................................................................................TGAACGGAGAACTGATAAGGG..........................................................................................	21	2	143.00	13.00	0.50	39.50	90.00	0.00
..............................................................................................TGGACGGAGCACTGATAAGG...........................................................................................	20	2	142.00	8.50	0.00	20.00	113.50	0.00
..............................................................................................TGGACGGGGAACTGATAAGG...........................................................................................	20	2	139.00	30.50	0.50	12.50	95.50	0.00
..............................................................................................TGTACGGAGAACTGATAAGGG..........................................................................................	21	2	139.00	78.00	0.00	28.00	33.00	0.00
..............................................................................................TGGACTGAGAACTGATAAGGG..........................................................................................	21	2	131.00	38.00	0.00	64.00	27.50	1.50
..............................................................................................TGGACGGAGAACTGATAAGGGAA........................................................................................	23	2	128.50	48.50	0.50	29.00	49.50	1.00
..............................................................................................TGGACGGAGAACGGATAAGGGC.........................................................................................	22	2	126.50	1.50	1.50	15.50	71.00	37.00
..............................................................................................TGGACGGAGAACTGATCAGGGC.........................................................................................	22	2	125.50	4.00	15.50	33.00	73.00	0.00
..............................................................................................TGGACGGAGAACCGATAAGGG..........................................................................................	21	2	123.50	23.00	1.00	30.00	69.50	0.00
..............................................................................................TGGACGGAGAACTGATCAGG...........................................................................................	20	2	120.00	1.50	1.00	31.50	86.00	0.00
..............................................................................................TGGACGGAGAACTGATACGG...........................................................................................	20	2	117.50	5.50	0.50	32.00	79.50	0.00

droWil1

AC--GCGAAGA-------------GTCAGT-TAAAGCTGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCAACA----------------------------------------------------------------------	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
..............................................................................................TGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	2948324.00	100218.00	296529.00	2028759.00	522818.00
..............................................................................................TGGACGGAGAACTGATAAGGG..........................................................................................	21	1	323833.00	51547.00	38303.00	187298.00	46685.00
..............................................................................................TGGACGGAGAACTGATAAGG...........................................................................................	20	1	76706.00	20464.00	4360.00	34823.00	17059.00
..............................................................................................TGGACGGAGAACTGATAAGGGCA........................................................................................	23	1	26022.00	1085.00	1102.00	5876.00	17959.00
..............................................................................................TGGACGGAGAACTGATAAGGGA.........................................................................................	22	1	21154.00	1252.00	1071.00	13201.00	5630.00
..............................................................................................TGGACGGAGAACTGATAAG............................................................................................	19	1	19807.00	2464.00	234.00	3640.00	13469.00
..............................................................................................TGGACGGAGAACTGATAAGGGCT........................................................................................	23	1	19359.00	2485.00	1194.00	9115.00	6565.00
..............................................................................................TGGACGGAGAACTGATAAGGAC.........................................................................................	22	1	14066.00	70.00	244.00	5205.00	8547.00
..............................................................................................TGGACGGAGAACTGATAAGGGT.........................................................................................	22	1	9677.00	1965.00	391.00	5791.00	1530.00
..............................................................................................TGGACGGAGAAATGATAAGGGC.........................................................................................	22	1	8854.00	23.00	154.00	8559.00	118.00
..............................................................................................CGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	8282.00	130.00	451.00	7429.00	272.00
..............................................................................................TGGACGGAGAACTGATAAAGGC.........................................................................................	22	1	7374.00	102.00	330.00	6820.00	122.00
..............................................................................................TGGACGGAGAACTGATAA.............................................................................................	18	1	6332.00	17.00	13.00	79.00	6223.00
..............................................................................................TGGAAGGAGAACTGATAAGGGC.........................................................................................	22	1	5461.00	11.00	157.00	5268.00	25.00
..............................................................................................TGGACGGAGAACTGATAAGAGC.........................................................................................	22	1	4903.00	36.00	139.00	4632.00	96.00
.............................................................................................CTGGACGGAGAACTGATAAGGGC.........................................................................................	23	1	4779.00	135.00	617.00	3920.00	107.00
..............................................................................................TTGACGGAGAACTGATAAGGGC.........................................................................................	22	1	4644.00	121.00	742.00	2767.00	1014.00
..............................................................................................TGGACTGAGAACTGATAAGGGC.........................................................................................	22	1	4145.00	33.00	791.00	2865.00	456.00
..............................................................................................TGGACAGAGAACTGATAAGGGC.........................................................................................	22	1	4028.00	72.00	219.00	3579.00	158.00
..............................................................................................TGGATGGAGAACTGATAAGGGC.........................................................................................	22	1	3880.00	94.00	470.00	3105.00	211.00
..............................................................................................TGGACGGAGAACTGATAATGGC.........................................................................................	22	1	3728.00	59.00	831.00	2582.00	256.00
..............................................................................................AGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	3702.00	22.00	94.00	3510.00	76.00
..............................................................................................TGGACGGAGAACTGATAAGGGCC........................................................................................	23	1	3633.00	223.00	232.00	1037.00	2141.00
..............................................................................................TAGACGGAGAACTGATAAGGGC.........................................................................................	22	1	3602.00	77.00	194.00	3134.00	197.00
..............................................................................................TGGACGGAGAGCTGATAAGGGC.........................................................................................	22	1	3482.00	119.00	353.00	2553.00	457.00
..............................................................................................TGTACGGAGAACTGATAAGGGC.........................................................................................	22	1	3457.00	95.00	601.00	2418.00	343.00
..............................................................................................TGGACGGAGAACCGATAAGGGC.........................................................................................	22	1	3443.00	101.00	326.00	2435.00	581.00
..............................................................................................TGGACGGAGAACTAATAAGGGC.........................................................................................	22	1	3381.00	39.00	103.00	3113.00	126.00
..............................................................................................TGGACGGAAAACTGATAAGGGC.........................................................................................	22	1	3282.00	29.00	110.00	3064.00	79.00
..............................................................................................GGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	3270.00	12.00	66.00	3142.00	50.00
..............................................................................................TGGGCGGAGAACTGATAAGGGC.........................................................................................	22	1	3128.00	95.00	253.00	2215.00	565.00
..............................................................................................TGGACGGAGAACTGATAAGGCC.........................................................................................	22	1	3074.00	296.00	521.00	2087.00	170.00
..............................................................................................TGGACGGGGAACTGATAAGGGC.........................................................................................	22	1	2970.00	115.00	295.00	2216.00	344.00
..............................................................................................TGGACGGAGAACTGATAGGGGC.........................................................................................	22	1	2950.00	82.00	149.00	1825.00	894.00
..............................................................................................TGGACGGAGAACTGATAAGTGC.........................................................................................	22	1	2899.00	27.00	662.00	1602.00	608.00
..............................................................................................TGAACGGAGAACTGATAAGGGC.........................................................................................	22	1	2889.00	31.00	99.00	2661.00	98.00
..............................................................................................TGGACGGAGAACTGACAAGGGC.........................................................................................	22	1	2787.00	122.00	259.00	2265.00	141.00
...............................................................................................TGACGGAGAACTGATAAGGGC.........................................................................................	21	1	2772.00	79.00	258.00	2030.00	405.00
..............................................................................................TGGACGGATAACTGATAAGGGC.........................................................................................	22	1	2651.00	36.00	448.00	1887.00	280.00
..............................................................................................TGGACGGAGGACTGATAAGGGC.........................................................................................	22	1	2644.00	104.00	275.00	2081.00	184.00
..............................................................................................TGGACGGAGAACTGGTAAGGGC.........................................................................................	22	1	2598.00	98.00	238.00	1972.00	290.00
..............................................................................................TCGACGGAGAACTGATAAGGGC.........................................................................................	22	1	2288.00	79.00	203.00	1781.00	225.00
..............................................................................................TGGACGGAGAACTGATAAGGTC.........................................................................................	22	1	2284.00	101.00	538.00	1386.00	259.00
..............................................................................................TGGACGGCGAACTGATAAGGGC.........................................................................................	22	1	2214.00	80.00	129.00	1983.00	22.00
..............................................................................................TGGACGGAGAACTGATAAGCGC.........................................................................................	22	1	2052.00	52.00	154.00	1239.00	607.00
..............................................................................................TGCACGGAGAACTGATAAGGGC.........................................................................................	22	1	2005.00	74.00	184.00	1603.00	144.00
..............................................................................................TGGACGGAGAACAGATAAGGGC.........................................................................................	22	1	2004.00	8.00	38.00	842.00	1116.00
..............................................................................................TGGACGGAGCACTGATAAGGGC.........................................................................................	22	1	1947.00	49.00	166.00	1494.00	238.00
..............................................................................................TGGACCGAGAACTGATAAGGGC.........................................................................................	22	1	1931.00	42.00	122.00	1405.00	362.00
..............................................................................................TGGACGGAGAACTGATAACGGC.........................................................................................	22	1	1928.00	67.00	221.00	1538.00	102.00
..............................................................................................TGGACGTAGAACTGATAAGGGC.........................................................................................	22	1	1865.00	19.00	635.00	1177.00	34.00
..............................................................................................TGGACGGAGACCTGATAAGGGC.........................................................................................	22	1	1858.00	52.00	138.00	1645.00	23.00
..............................................................................................TGGACGGAGAACTGCTAAGGGC.........................................................................................	22	1	1852.00	64.00	155.00	1614.00	19.00
..............................................................................................TGGACGGAGAACTGATGAGGGC.........................................................................................	22	1	1835.00	49.00	181.00	1331.00	274.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTT.......................................................................................	24	1	1834.00	464.00	37.00	459.00	874.00
..............................................................................................TGGACGGAGAACTGATACGGGC.........................................................................................	22	1	1688.00	45.00	104.00	1513.00	26.00
..............................................................................................TGGCCGGAGAACTGATAAGGGC.........................................................................................	22	1	1682.00	65.00	165.00	1437.00	15.00
..............................................................................................TGGACGGAGAACTTATAAGGGC.........................................................................................	22	1	1667.00	31.00	320.00	1040.00	276.00
..............................................................................................TGGACGGACAACTGATAAGGGC.........................................................................................	22	1	1654.00	40.00	139.00	1312.00	163.00
..............................................................................................TGGACGGAGAATTGATAAGGGC.........................................................................................	22	1	1593.00	41.00	99.00	1325.00	128.00
..............................................................................................TGGACGGAGAACGGATAAGGGC.........................................................................................	22	1	1581.00	6.00	23.00	173.00	1379.00
..............................................................................................TGGACGGAGAACTGATCAGGGC.........................................................................................	22	1	1522.00	43.00	100.00	1375.00	4.00
..............................................................................................TGGACGGAGAACTGAAAAGGGC.........................................................................................	22	1	1521.00	17.00	46.00	1351.00	107.00
..............................................................................................TGGACGGAGAACTCATAAGGGC.........................................................................................	22	1	1496.00	38.00	95.00	1097.00	266.00
...............................................................................................GGACGGAGAACTGATAAGGGC.........................................................................................	21	1	1382.00	39.00	106.00	926.00	311.00
..............................................................................................TGGACGGAGAACTGATAAGGA..........................................................................................	21	1	1372.00	146.00	37.00	557.00	632.00
..............................................................................................TGGACGGAGAACTGATAAGGGAA........................................................................................	23	1	1266.00	78.00	107.00	182.00	899.00
..............................................................................................TGGACGGAGAACTGATAAGGGCG........................................................................................	23	1	1252.00	40.00	29.00	166.00	1017.00
..............................................................................................TGGACGGAGAACTGATAAGGC..........................................................................................	21	1	1159.00	106.00	158.00	787.00	108.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAT.......................................................................................	24	1	1130.00	72.00	31.00	262.00	765.00
..............................................................................................TGGACGGAGAACTGATAAGGT..........................................................................................	21	1	1082.00	302.00	73.00	516.00	191.00
..............................................................................................TGGACGGAGAACTGATAAGGGG.........................................................................................	22	1	1058.00	17.00	31.00	261.00	749.00
..............................................................................................TGGACGGAGAACTGATAAA............................................................................................	19	1	1040.00	22.00	0.00	30.00	988.00
..............................................................................................TGGACGGTGAACTGATAAGGGC.........................................................................................	22	1	909.00	24.00	67.00	770.00	48.00
..............................................................................................TGGACGGAGAAATGATAAGGG..........................................................................................	21	1	886.00	26.00	24.00	821.00	15.00
................................................................................................GACGGAGAACTGATAAGGGC.........................................................................................	20	1	886.00	20.00	61.00	464.00	341.00
..............................................................................................CGGACGGAGAACTGATAAGGG..........................................................................................	21	1	814.00	57.00	61.00	673.00	23.00
..............................................................................................TGGACGxxGAACTGATAAGGGC.........................................................................................	20	1	709.00	18.00	111.00	555.00	25.00
..............................................................................................TGGACGAAGAACTGATAAGGGC.........................................................................................	22	1	709.00	32.00	86.00	513.00	78.00
..............................................................................................TGGACGGAGAACTGATATGGGC.........................................................................................	22	1	696.00	15.00	64.00	586.00	31.00
..............................................................................................TGGACGGAGAACTGATAAAGG..........................................................................................	21	1	690.00	32.00	22.00	580.00	56.00
..............................................................................................TGGACxGAGAACTGATAAGGGC.........................................................................................	21	1	607.00	19.00	60.00	454.00	74.00
..............................................................................................TGGACGGAGAACTGATTAGGGC.........................................................................................	22	1	589.00	12.00	42.00	521.00	14.00
..............................................................................................TGGACTGAGAACTGATAAGGG..........................................................................................	21	1	571.00	51.00	110.00	318.00	92.00
..............................................................................................TGGTCGGAGAACTGATAAGGGC.........................................................................................	22	1	560.00	15.00	37.00	462.00	46.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTT......................................................................................	25	1	554.00	145.00	3.00	99.00	307.00
..............................................................................................TGGACGGAGAACTGTTAAGGGC.........................................................................................	22	1	550.00	6.00	36.00	464.00	44.00
.......................................................CCTTATCATTCTCGCGCCCCGT................................................................................................................................	22	1	549.00	37.00	320.00	160.00	32.00
.............................................................................................CTGGACGGAGAACTGATAAGGG..........................................................................................	22	1	538.00	71.00	78.00	373.00	16.00
..............................................................................................TTGACGGAGAACTGATAAGGG..........................................................................................	21	1	535.00	63.00	102.00	259.00	111.00
..............................................................................................TGGAAGGAGAACTGATAAGGG..........................................................................................	21	1	510.00	6.00	16.00	484.00	4.00
..............................................................................................TGGACGGAGTACTGATAAGGGC.........................................................................................	22	1	507.00	17.00	41.00	399.00	50.00
..............................................................................................TGGACGGAxAACTGATAAGGGC.........................................................................................	21	1	499.00	16.00	46.00	371.00	66.00
..............................................................................................TGGACGGAGAACTGATAAGAG..........................................................................................	21	1	487.00	15.00	15.00	440.00	17.00
..............................................................................................TGTACGGAGAACTGATAAGGG..........................................................................................	21	1	468.00	59.00	81.00	312.00	16.00
..............................................................................................TGGACGGAGAACTGATAAGGGTT........................................................................................	23	1	464.00	76.00	7.00	241.00	140.00
..............................................................................................TGGACGGAGAACTGATAGGGC..........................................................................................	21	1	449.00	26.00	47.00	334.00	42.00
..............................................................................................TGGACGCAGAACTGATAAGGGC.........................................................................................	22	1	446.00	45.00	135.00	218.00	48.00
..............................................................................................TGGATGGAGAACTGATAAGGG..........................................................................................	21	1	427.00	52.00	53.00	300.00	22.00
..............................................................................................TGGACGGAGAACTGATAATGG..........................................................................................	21	1	412.00	22.00	147.00	226.00	17.00
..............................................................................................TGGACGGAGATCTGATAAGGGC.........................................................................................	22	1	408.00	17.00	34.00	333.00	24.00

droVir3

TT--GGGCT---------------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAAC-TAAGTGCAGCA---------------------AC-------------------------TATTT--	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
..............................................................................................TGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	498235.00	207708.00	47456.00	46295.00	76392.00	120384.00
..............................................................................................TGGACGGAGAACTGATAAGGG..........................................................................................	21	1	137018.00	78070.00	41147.00	3901.00	4345.00	9555.00
..............................................................................................TGGACGGAGAACTGATAAGG...........................................................................................	20	1	61633.00	40490.00	13675.00	395.00	1941.00	5132.00
..............................................................................................TGGACGGAGAACTGATAAG............................................................................................	19	1	22661.00	6644.00	7098.00	34.00	1640.00	7245.00
..............................................................................................TGGACGGAGAACTGATAAGGGCT........................................................................................	23	1	17253.00	8193.00	2154.00	356.00	2821.00	3729.00
..............................................................................................TGGACGGAGAACTGATAAGGGCA........................................................................................	23	1	10617.00	3280.00	777.00	249.00	2014.00	4297.00
..............................................................................................TGGACGGAGAACTGATAAGGGA.........................................................................................	22	1	7385.00	2968.00	1664.00	207.00	779.00	1767.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTT.......................................................................................	24	1	6449.00	2887.00	162.00	38.00	1440.00	1922.00
..............................................................................................TGGACGGAGAACTGATAAGGGT.........................................................................................	22	1	6086.00	3871.00	1344.00	120.00	242.00	509.00
..............................................................................................TGGACGGAGAACTGATAA.............................................................................................	18	1	5122.00	31.00	130.00	0.00	786.00	4175.00
..............................................................................................TGGACGGAGAACTGATAAGGAC.........................................................................................	22	1	4767.00	238.00	49.00	90.00	1365.00	3025.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTT......................................................................................	25	1	2777.00	984.00	36.00	6.00	681.00	1070.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAT.......................................................................................	24	1	2697.00	836.00	78.00	20.00	602.00	1161.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTTT.....................................................................................	26	1	1698.00	399.00	9.00	2.00	559.00	729.00
..............................................................................................TGGACGGAGAACTGATAAGGGCC........................................................................................	23	1	1539.00	313.00	41.00	37.00	542.00	606.00
..............................................................................................TGGACGGAGAACTGATAAA............................................................................................	19	1	1320.00	65.00	50.00	0.00	164.00	1041.00
..............................................................................................TGGACGGAGAACTGATAAGCGC.........................................................................................	22	1	1084.00	121.00	496.00	342.00	60.00	65.00
..............................................................................................TGGACGGAGAACTGATAAGGA..........................................................................................	21	1	928.00	415.00	92.00	8.00	103.00	310.00
..............................................................................................TGGACGGAGAACTGATAAGGT..........................................................................................	21	1	925.00	578.00	241.00	19.00	22.00	65.00
..............................................................................................TGGACGGAGAACTGATAAGTGC.........................................................................................	22	1	890.00	43.00	114.00	569.00	76.00	88.00
..............................................................................................TGGACGGAGAACTGATAAGGGG.........................................................................................	22	1	857.00	194.00	53.00	75.00	186.00	349.00
..............................................................................................TGGACGGAGAACTGATAAGGCC.........................................................................................	22	1	840.00	445.00	223.00	90.00	43.00	39.00
..............................................................................................TGGACGGAGAACTGATAAGGGTT........................................................................................	23	1	791.00	377.00	154.00	1.00	76.00	183.00
..............................................................................................TGGACGGAGAACTGATAAAGGC.........................................................................................	22	1	701.00	276.00	52.00	316.00	19.00	38.00
..............................................................................................TGGACGGAGAACTGATAATGGC.........................................................................................	22	1	700.00	125.00	89.00	431.00	28.00	27.00
..............................................................................................TGGACGGAGAACTGATAAGGGCG........................................................................................	23	1	659.00	56.00	34.00	5.00	214.00	350.00
..............................................................................................TGGACGGAGAACTGATAAGGTC.........................................................................................	22	1	643.00	141.00	134.00	259.00	55.00	54.00
..............................................................................................TGGACGGGGAACTGATAAGGGC.........................................................................................	22	1	636.00	194.00	110.00	97.00	95.00	140.00
..............................................................................................CGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	599.00	239.00	138.00	83.00	51.00	88.00
..............................................................................................TGGACGGAGAGCTGATAAGGGC.........................................................................................	22	1	593.00	242.00	79.00	80.00	81.00	111.00
..............................................................................................TGGGCGGAGAACTGATAAGGGC.........................................................................................	22	1	588.00	168.00	91.00	84.00	102.00	143.00
..............................................................................................TGGACGGAGGACTGATAAGGGC.........................................................................................	22	1	563.00	201.00	169.00	126.00	28.00	39.00
..............................................................................................TGGACGGAGAACTGATAGGGGC.........................................................................................	22	1	562.00	113.00	63.00	60.00	104.00	222.00
..............................................................................................TGGACGGAGAACTGATAAGGGAA........................................................................................	23	1	555.00	183.00	64.00	31.00	81.00	196.00
.............................................................................................CTGGACGGAGAACTGATAAGGGC.........................................................................................	23	1	549.00	343.00	111.00	71.00	14.00	10.00
..............................................................................................TGGACGGAGAACTGATAAGCG..........................................................................................	21	1	548.00	52.00	472.00	23.00	0.00	1.00
..............................................................................................TTGACGGAGAACTGATAAGGGC.........................................................................................	22	1	542.00	169.00	22.00	94.00	137.00	120.00
..............................................................................................TGGACGGAGAACTGGTAAGGGC.........................................................................................	22	1	481.00	187.00	90.00	83.00	59.00	62.00
..............................................................................................TGGACGGAGAACTGACAAGGGC.........................................................................................	22	1	479.00	284.00	72.00	65.00	18.00	40.00
..............................................................................................TGGACGGAGAACTGATAAGAGC.........................................................................................	22	1	471.00	216.00	53.00	166.00	15.00	21.00
..............................................................................................TGGACGGAGAACTGATAACGGC.........................................................................................	22	1	462.00	128.00	132.00	182.00	7.00	13.00
..............................................................................................TGGACGGAGAACTGATAAGGGTTT.......................................................................................	24	1	452.00	174.00	28.00	2.00	54.00	194.00
..............................................................................................TGGACGGAGCACTGATAAGGGC.........................................................................................	22	1	431.00	49.00	78.00	223.00	26.00	55.00
..............................................................................................TGGACGGAGAACTGATAAGGC..........................................................................................	21	1	430.00	184.00	192.00	5.00	18.00	31.00
..............................................................................................TGGACGGAGAACTGATAAGA...........................................................................................	20	1	429.00	89.00	25.00	0.00	36.00	279.00
..............................................................................................TGGACGGAGAACCGATAAGGGC.........................................................................................	22	1	420.00	235.00	50.00	65.00	28.00	42.00
..............................................................................................TGGACGGAGAACTGCTAAGGGC.........................................................................................	22	1	398.00	192.00	70.00	128.00	4.00	4.00
..............................................................................................TGGACGGAGAACTGATGAGGGC.........................................................................................	22	1	377.00	110.00	42.00	77.00	54.00	94.00
..............................................................................................TGGACGGAGAACTGATAAGGGAT........................................................................................	23	1	371.00	121.00	16.00	2.00	85.00	147.00
..............................................................................................TGTACGGAGAACTGATAAGGGC.........................................................................................	22	1	370.00	169.00	12.00	111.00	42.00	36.00
..............................................................................................TAGACGGAGAACTGATAAGGGC.........................................................................................	22	1	345.00	106.00	43.00	113.00	29.00	54.00
..............................................................................................TGGATGGAGAACTGATAAGGGC.........................................................................................	22	1	342.00	159.00	59.00	33.00	27.00	64.00
..............................................................................................TGGACAGAGAACTGATAAGGGC.........................................................................................	22	1	324.00	138.00	37.00	75.00	20.00	54.00
..............................................................................................TGGAAGGAGAACTGATAAGGGC.........................................................................................	22	1	318.00	25.00	254.00	36.00	0.00	3.00
..............................................................................................TGGACGGAGAAATGATAAGGGC.........................................................................................	22	1	314.00	125.00	23.00	29.00	22.00	115.00
...................................................................................ATCTAGACAGCCGGACGG........................................................................................................	18	1	311.00	4.00	1.00	0.00	272.00	34.00
..............................................................................................GGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	311.00	122.00	61.00	107.00	12.00	9.00
...............................................................................................TGACGGAGAACTGATAAGGGC.........................................................................................	21	1	305.00	169.00	6.00	6.00	65.00	59.00
..............................................................................................TGGACGGAGGACTGATAAGGG..........................................................................................	21	1	301.00	69.00	210.00	12.00	7.00	3.00
..............................................................................................TGGACGGAGAACTAATAAGGGC.........................................................................................	22	1	300.00	136.00	61.00	69.00	13.00	21.00
..............................................................................................TGGACGGAGAACTGAGAAGGGC.........................................................................................	22	1	297.00	77.00	147.00	60.00	9.00	4.00
..............................................................................................TGGACGGATAACTGATAAGGGC.........................................................................................	22	1	288.00	58.00	12.00	140.00	40.00	38.00
..............................................................................................TGGACGGAGAACTGAAAAGGGC.........................................................................................	22	1	286.00	198.00	11.00	13.00	40.00	24.00
..............................................................................................TGGACGGAGAACTTATAAGGGC.........................................................................................	22	1	280.00	65.00	15.00	133.00	42.00	25.00
..............................................................................................TGGACGGAGAACTGATAAGT...........................................................................................	20	1	275.00	91.00	32.00	3.00	26.00	123.00
..............................................................................................TGGACTGAGAACTGATAAGGGC.........................................................................................	22	1	275.00	83.00	21.00	88.00	25.00	58.00
..............................................................................................TGGACGGAGAACTGCTAAGGG..........................................................................................	21	1	270.00	126.00	124.00	17.00	0.00	3.00
..............................................................................................TGGACGGAGAACTCATAAGGGC.........................................................................................	22	1	251.00	74.00	67.00	57.00	23.00	30.00
..............................................................................................TGGACGGAGAACTGATCAGGGC.........................................................................................	22	1	251.00	65.00	36.00	116.00	13.00	21.00
..............................................................................................TGGACGGAGAACTGATACGGGC.........................................................................................	22	1	247.00	64.00	57.00	115.00	4.00	7.00
.............................................................................................CTGGACGGAGAACTGATAAGGG..........................................................................................	22	1	231.00	129.00	91.00	4.00	2.00	5.00
..............................................................................................TGGACGGAGTACTGATAAGGGC.........................................................................................	22	1	228.00	18.00	105.00	67.00	11.00	27.00
..............................................................................................TGGACGGAGAACTGATAAGGGCCT.......................................................................................	24	1	226.00	110.00	8.00	1.00	52.00	55.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAA.......................................................................................	24	1	219.00	25.00	9.00	20.00	56.00	109.00
..............................................................................................TGGACGGAGAACTGATAGGGG..........................................................................................	21	1	213.00	66.00	117.00	6.00	6.00	18.00
...............................................................................................GGACGGAGAACTGATAAGGGC.........................................................................................	21	1	212.00	71.00	35.00	13.00	40.00	53.00
..............................................................................................TGGACGGGGAACTGATAAGGG..........................................................................................	21	1	200.00	83.00	98.00	8.00	7.00	4.00
..............................................................................................TCGACGGAGAACTGATAAGGGC.........................................................................................	22	1	199.00	87.00	20.00	50.00	20.00	22.00
..............................................................................................TGGACGGAGAACTGATAAGTG..........................................................................................	21	1	196.00	18.00	109.00	68.00	0.00	1.00
..............................................................................................TGCACGGAGAACTGATAAGGGC.........................................................................................	22	1	195.00	75.00	31.00	58.00	15.00	16.00
..............................................................................................TGGACGGAGAACAGATAAGGGC.........................................................................................	22	1	192.00	154.00	22.00	10.00	2.00	4.00
..............................................................................................TGGACGGAGACCTGATAAGGGC.........................................................................................	22	1	192.00	86.00	36.00	61.00	3.00	6.00
..............................................................................................TGGACGAAGAACTGATAAGGGC.........................................................................................	22	1	188.00	97.00	39.00	30.00	12.00	10.00
..............................................................................................TGGACCGAGAACTGATAAGGGC.........................................................................................	22	1	187.00	47.00	41.00	24.00	24.00	51.00
..............................................................................................TGGACGTAGAACTGATAAGGGC.........................................................................................	22	1	184.00	42.00	9.00	121.00	6.00	6.00
..............................................................................................TGGAAGGAGAACTGATAAGGG..........................................................................................	21	1	179.00	5.00	171.00	3.00	0.00	0.00
..............................................................................................TGGACGGAGAACTGGTAAGGG..........................................................................................	21	1	178.00	83.00	70.00	14.00	6.00	5.00
..............................................................................................TGGACGGAGAGCTGATAAGGG..........................................................................................	21	1	174.00	76.00	69.00	12.00	5.00	12.00
..............................................................................................TGGACGGAGAACTGATAAAGG..........................................................................................	21	1	174.00	64.00	54.00	26.00	11.00	19.00
..............................................................................................AGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	172.00	56.00	48.00	37.00	17.00	14.00
..............................................................................................TGGACGGAGAACTGATAACGG..........................................................................................	21	1	165.00	50.00	92.00	20.00	0.00	3.00
..............................................................................................TGAACGGAGAACTGATAAGGGC.........................................................................................	22	1	164.00	48.00	47.00	32.00	18.00	19.00
..............................................................................................TGGACGGAGAACTGACAAGGG..........................................................................................	21	1	164.00	97.00	61.00	6.00	0.00	0.00
..............................................................................................TGGACGGAGAATTGATAAGGGC.........................................................................................	22	1	163.00	63.00	38.00	16.00	20.00	26.00
..............................................................................................TGGACGGAGCACTGATAAGGG..........................................................................................	21	1	163.00	32.00	90.00	31.00	3.00	7.00
..............................................................................................CGGACGGAGAACTGATAAGGG..........................................................................................	21	1	160.00	68.00	83.00	6.00	1.00	2.00
..............................................................................................TGGACGGAGAACTGATTT.............................................................................................	18	1	157.00	2.00	7.00	0.00	16.00	132.00
..............................................................................................TGGACGGAGAACTGATAATGG..........................................................................................	21	1	157.00	40.00	81.00	35.00	1.00	0.00
..............................................................................................TGGGCGGAGAACTGATAAGGG..........................................................................................	21	1	153.00	58.00	67.00	9.00	8.00	11.00
..............................................................................................TGGACGGAGAACTGATACGGG..........................................................................................	21	1	150.00	34.00	98.00	17.00	1.00	0.00
..............................................................................................TGGACGGAGAACTGTTAAGGGC.........................................................................................	22	1	143.00	29.00	87.00	16.00	6.00	5.00

droMoj3

AA--TGGCCAATCTGCCGT-----------TGGGCATTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAA---AT-----------------------------AC-------------------------ATGCG--	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
..............................................................................................TGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	347929.00	111146.00	99797.00	70475.00	66511.00
..............................................................................................TGGACGGAGAACTGATAAGGG..........................................................................................	21	1	206236.00	54964.00	87015.00	55786.00	8471.00
..............................................................................................TGGACGGAGAACTGATAAGG...........................................................................................	20	1	65496.00	18891.00	28783.00	17206.00	616.00
..............................................................................................TGGACGGAGAACTGATAAG............................................................................................	19	1	13861.00	2950.00	6661.00	4225.00	25.00
..............................................................................................TGGACGGAGAACTGATAAGGGCT........................................................................................	23	1	13041.00	4557.00	4924.00	2949.00	611.00
..............................................................................................TGGACGGAGAACTGATAAGGGT.........................................................................................	22	1	9082.00	2881.00	3779.00	2220.00	202.00
..............................................................................................TGGACGGAGAACTGATAAGGGCA........................................................................................	23	1	7301.00	2308.00	2832.00	1789.00	372.00
..............................................................................................TGGACGGAGAACTGATAAGGGA.........................................................................................	22	1	7301.00	1856.00	3262.00	1935.00	248.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTT.......................................................................................	24	1	2760.00	1650.00	708.00	351.00	51.00
..............................................................................................TGGACGGAGCACTGATAAGGGC.........................................................................................	22	1	1312.00	14.00	206.00	696.00	396.00
..............................................................................................TGGAAGGAGAACTGATAAGGGC.........................................................................................	22	1	1101.00	15.00	492.00	221.00	373.00
..............................................................................................TGGACGGAGAACTGATCAGGG..........................................................................................	21	1	1088.00	7.00	160.00	857.00	64.00
..............................................................................................TGGACGGAGAACTGATAAGGT..........................................................................................	21	1	1052.00	363.00	397.00	283.00	9.00
..............................................................................................TGGACGGAGCACTGATAAGGG..........................................................................................	21	1	1018.00	20.00	248.00	693.00	57.00
..............................................................................................TGGACGGAGAACTGCTAAGGGC.........................................................................................	22	1	1007.00	13.00	193.00	595.00	206.00
..............................................................................................TGGACGGAGAACTGCTAAGGG..........................................................................................	21	1	979.00	7.00	293.00	639.00	40.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAT.......................................................................................	24	1	948.00	390.00	366.00	169.00	23.00
..............................................................................................TGGACGGAGAACTGATCAGGGC.........................................................................................	22	1	819.00	8.00	95.00	537.00	179.00
..............................................................................................TGGACGGAGAACTGATAATGGC.........................................................................................	22	1	814.00	185.00	175.00	381.00	73.00
..............................................................................................TGGACGGAGAACTGATAAGTGC.........................................................................................	22	1	799.00	158.00	226.00	341.00	74.00
..............................................................................................TGGACGGAGAACTGATACGGG..........................................................................................	21	1	797.00	11.00	178.00	559.00	49.00
..............................................................................................TGGACGGAGAACTGATAAGGGTT........................................................................................	23	1	775.00	240.00	326.00	203.00	6.00
..............................................................................................TGGACGGAGGACTGATAAGGGC.........................................................................................	22	1	764.00	75.00	265.00	273.00	151.00
..............................................................................................TGGACGGAGAACTGATAAGTG..........................................................................................	21	1	741.00	61.00	257.00	412.00	11.00
..............................................................................................TGGACGGAGAACTGATAAGCGC.........................................................................................	22	1	734.00	30.00	349.00	267.00	88.00
..............................................................................................TGGACGGAGAACTGATAAGGTC.........................................................................................	22	1	694.00	175.00	275.00	210.00	34.00
..............................................................................................TGGACGGAGAACTGATAAAGGC.........................................................................................	22	1	656.00	113.00	111.00	257.00	175.00
..............................................................................................TGGACGGAGGACTGATAAGGG..........................................................................................	21	1	633.00	34.00	307.00	269.00	23.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTT......................................................................................	25	1	630.00	423.00	136.00	63.00	8.00
..............................................................................................TGGACGGAGAACTGATAAGGC..........................................................................................	21	1	613.00	267.00	233.00	108.00	5.00
..............................................................................................TGGACGGAGAACTGATACGGGC.........................................................................................	22	1	609.00	16.00	113.00	339.00	141.00
..............................................................................................TGGACGGAGAGCTGATAAGGGC.........................................................................................	22	1	593.00	87.00	233.00	146.00	127.00
..............................................................................................TGGACGGAGAACTGATAATGG..........................................................................................	21	1	587.00	85.00	147.00	339.00	16.00
..............................................................................................TGGACGGAGAACTGATAAGCG..........................................................................................	21	1	587.00	22.00	325.00	228.00	12.00
..............................................................................................TGGACGGAGAACTGATAAGGA..........................................................................................	21	1	575.00	201.00	230.00	137.00	7.00
..............................................................................................TGGACGGGGAACTGATAAGGGC.........................................................................................	22	1	542.00	83.00	206.00	152.00	101.00
..............................................................................................TGGGCGGAGAACTGATAAGGGC.........................................................................................	22	1	509.00	59.00	223.00	132.00	95.00
..............................................................................................TGGAAGGAGAACTGATAAGGG..........................................................................................	21	1	508.00	13.00	309.00	134.00	52.00
..............................................................................................TAGACGGAGAACTGATAAGGGC.........................................................................................	22	1	483.00	38.00	100.00	226.00	119.00
..............................................................................................CGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	482.00	72.00	178.00	131.00	101.00
.............................................................................................CTGGACGGAGAACTGATAAGGGC.........................................................................................	23	1	477.00	47.00	180.00	146.00	104.00
..............................................................................................TGGACGGAGAACTGATAA.............................................................................................	18	1	444.00	13.00	252.00	172.00	7.00
..............................................................................................TGGACGGAGAACTGGTAAGGGC.........................................................................................	22	1	444.00	63.00	152.00	102.00	127.00
..............................................................................................TGGATGGAGAACTGATAAGGGC.........................................................................................	22	1	436.00	117.00	131.00	84.00	104.00
..............................................................................................TGGACGGGGAACTGATAAGGG..........................................................................................	21	1	431.00	39.00	234.00	135.00	23.00
..............................................................................................TGGACGGAGAACTGATAAGGGAA........................................................................................	23	1	428.00	142.00	159.00	85.00	42.00
..............................................................................................TGGACAGAGAACTGATAAGGGC.........................................................................................	22	1	423.00	87.00	88.00	158.00	90.00
..............................................................................................TGGACGGAGAACTGATAAGGGCC........................................................................................	23	1	417.00	162.00	102.00	99.00	54.00
..............................................................................................TGGACGGAGAACTGATAACGGC.........................................................................................	22	1	399.00	34.00	186.00	116.00	63.00
..............................................................................................TGGACGGAGAACTGACAAGGGC.........................................................................................	22	1	397.00	35.00	157.00	141.00	64.00
..............................................................................................TGGACGGAGAACTGATCAGG...........................................................................................	20	1	385.00	3.00	67.00	310.00	5.00
..............................................................................................TGGACGGAGAACTGATAGGGG..........................................................................................	21	1	382.00	34.00	235.00	104.00	9.00
..............................................................................................TGGCCGGAGAACTGATAAGGGC.........................................................................................	22	1	377.00	22.00	116.00	210.00	29.00
..............................................................................................TGGACGGAGAGCTGATAAGGG..........................................................................................	21	1	365.00	49.00	207.00	94.00	15.00
..............................................................................................TGGACGGAGAACTGATAAGAGC.........................................................................................	22	1	352.00	47.00	118.00	107.00	80.00
..............................................................................................TGGACGGAGAACTGATAGGGGC.........................................................................................	22	1	347.00	43.00	131.00	119.00	54.00
..............................................................................................TGGACGGAGAACTGATAAGGCC.........................................................................................	22	1	344.00	120.00	177.00	32.00	15.00
..............................................................................................TGGACGGAGTACTGATAAGGGC.........................................................................................	22	1	343.00	10.00	129.00	123.00	81.00
..............................................................................................TGGACGGAGACCTGATAAGGGC.........................................................................................	22	1	338.00	12.00	81.00	144.00	101.00
..............................................................................................TGGACGGAGAACTGGTAAGGG..........................................................................................	21	1	331.00	31.00	181.00	98.00	21.00
..............................................................................................TGGACGGAGAACTGATAAAGG..........................................................................................	21	1	330.00	26.00	98.00	185.00	21.00
..............................................................................................TGGGCGGAGAACTGATAAGGG..........................................................................................	21	1	328.00	46.00	165.00	101.00	16.00
..............................................................................................TGGACGGAGAACCGATAAGGGC.........................................................................................	22	1	324.00	43.00	126.00	92.00	63.00
..............................................................................................TGGACGGAGAACTGATGAGGGC.........................................................................................	22	1	319.00	43.00	115.00	85.00	76.00
..............................................................................................CGGACGGAGAACTGATAAGGG..........................................................................................	21	1	299.00	35.00	162.00	93.00	9.00
..............................................................................................TGGACGGAGTACTGATAAGGG..........................................................................................	21	1	290.00	3.00	149.00	124.00	14.00
..............................................................................................TGGACGGAGCACTGATAAGG...........................................................................................	20	1	288.00	2.00	88.00	195.00	3.00
.......................................................CCTTATCATTCTCGCGCCCCGT................................................................................................................................	22	1	284.00	65.00	89.00	69.00	61.00
..............................................................................................TGGACGGAGAACTGATAAGGGG.........................................................................................	22	1	279.00	21.00	88.00	66.00	104.00
..............................................................................................TGGACGGAGAACTAATAAGGGC.........................................................................................	22	1	273.00	39.00	99.00	93.00	42.00
..............................................................................................TAGACGGAGAACTGATAAGGG..........................................................................................	21	1	268.00	23.00	67.00	164.00	14.00
..............................................................................................TGTACGGAGAACTGATAAGGGC.........................................................................................	22	1	266.00	220.00	14.00	23.00	9.00
..............................................................................................TTGACGGAGAACTGATAAGGGC.........................................................................................	22	1	257.00	197.00	25.00	28.00	7.00
..............................................................................................TGGACGGAGAACTGACAAGGG..........................................................................................	21	1	255.00	18.00	138.00	92.00	7.00
.............................................................................................CTGGACGGAGAACTGATAAGGG..........................................................................................	22	1	255.00	11.00	141.00	88.00	15.00
..............................................................................................TGGACAGAGAACTGATAAGGG..........................................................................................	21	1	252.00	23.00	93.00	122.00	14.00
..............................................................................................TGGACGGAGAACTGAGAAGGGC.........................................................................................	22	1	252.00	0.00	129.00	92.00	31.00
..............................................................................................TGGACGGAGAACTGCTAAGG...........................................................................................	20	1	249.00	3.00	58.00	186.00	2.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTC.......................................................................................	24	1	247.00	195.00	35.00	13.00	4.00
..............................................................................................TGGACGGAGAACTGATAAGC...........................................................................................	20	1	244.00	94.00	101.00	48.00	1.00
..............................................................................................TGGACGGAGAACTGATAAGGAC.........................................................................................	22	1	241.00	67.00	81.00	65.00	28.00
..............................................................................................TGGACTGAGAACTGATAAGGGC.........................................................................................	22	1	239.00	179.00	25.00	21.00	14.00
..............................................................................................TGGACGGAGAACTGATAAGAG..........................................................................................	21	1	235.00	22.00	101.00	99.00	13.00
..............................................................................................TGGATGGAGAACTGATAAGGG..........................................................................................	21	1	223.00	45.00	105.00	63.00	10.00
..............................................................................................TGGCCGGAGAACTGATAAGGG..........................................................................................	21	1	223.00	7.00	94.00	119.00	3.00
..............................................................................................TGGACGGAGAACTGATAACGG..........................................................................................	21	1	220.00	14.00	124.00	80.00	2.00
..............................................................................................AGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	217.00	33.00	96.00	56.00	32.00
..............................................................................................TGGACGGAGAACTGATAAGGGCG........................................................................................	23	1	217.00	36.00	102.00	74.00	5.00
..............................................................................................TGGACGGAGAACTGATACGG...........................................................................................	20	1	215.00	4.00	61.00	150.00	0.00
..............................................................................................TGGACGGAGAACCGATAAGGG..........................................................................................	21	1	211.00	26.00	105.00	71.00	9.00
..............................................................................................TGGACGGAGAACTGATGAGGG..........................................................................................	21	1	208.00	13.00	94.00	88.00	13.00
..............................................................................................TGAACGGAGAACTGATAAGGGC.........................................................................................	22	1	202.00	26.00	91.00	58.00	27.00
..............................................................................................TGGACGGAGGACTGATAAGG...........................................................................................	20	1	200.00	11.00	112.00	75.00	2.00
..............................................................................................TGGACGGAGAAATGATAAGGGC.........................................................................................	22	1	195.00	12.00	49.00	45.00	89.00
..............................................................................................GGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	192.00	27.00	87.00	51.00	27.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTTT.....................................................................................	26	1	187.00	125.00	42.00	17.00	3.00
..............................................................................................TGGACGGCGAACTGATAAGGGC.........................................................................................	22	1	186.00	13.00	44.00	89.00	40.00
..............................................................................................TGGACGGAGAACTCATAAGGGC.........................................................................................	22	1	184.00	11.00	92.00	58.00	23.00
..............................................................................................TGGACGGAGAACTGATAAGT...........................................................................................	20	1	182.00	79.00	59.00	44.00	0.00
..............................................................................................TGGACGTAGAACTGATAAGGGC.........................................................................................	22	1	182.00	130.00	19.00	18.00	15.00
..............................................................................................TGGACGGATAACTGATAAGGGC.........................................................................................	22	1	177.00	101.00	27.00	41.00	8.00

droGri2

CC--AGCCTGC-----------------ATATGGTTTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGGATAACTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAA--------------------------------------------------------------------	Size	Hit Count	Total Norm	V109 Male body
..............................................................................................TGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	27237.00	27237.00
..............................................................................................TGGACGGAGAACTGATAAGGG..........................................................................................	21	1	17278.00	17278.00
..............................................................................................TGGACGGAGAACTGATAAGG...........................................................................................	20	1	5980.00	5980.00
..............................................................................................TGGACGGAGAACTGATAAGGGCT........................................................................................	23	1	1577.00	1577.00
..............................................................................................TGGACGGAGAACTGATAAG............................................................................................	19	1	597.00	597.00
..............................................................................................TGGACGGAGAACTGATAAGGGT.........................................................................................	22	1	507.00	507.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTT.......................................................................................	24	1	392.00	392.00
..............................................................................................TGGACGGAGAACTGATACGGGC.........................................................................................	22	1	353.00	353.00
..............................................................................................TGGACGGAGAACTGATAAGGGA.........................................................................................	22	1	293.00	293.00
..............................................................................................TGGACGGAGAACTGATACGGG..........................................................................................	21	1	259.00	259.00
..............................................................................................TGGACGGAGAACTGATAAGGGCA........................................................................................	23	1	194.00	194.00
..............................................................................................TGGACGGAGAACTGATAGGGGC.........................................................................................	22	1	172.00	172.00
..............................................................................................TGGACGGAGAACTGATATGGGC.........................................................................................	22	1	164.00	164.00
..............................................................................................TGGACGGAGAACTGATATGGG..........................................................................................	21	1	114.00	114.00
..............................................................................................TGGACGGACAACTGATAAGGGC.........................................................................................	22	1	103.00	103.00
..............................................................................................TGGACGGAGAACTGATAGGGG..........................................................................................	21	1	100.00	100.00
..............................................................................................TGGACGGATAACTGATAAGGGC.........................................................................................	22	1	86.00	86.00
..............................................................................................TGGACGGACAACTGATAAGGG..........................................................................................	21	1	79.00	79.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTT......................................................................................	25	1	77.00	77.00
..............................................................................................TGCACGGAGAACTGATAAGGGC.........................................................................................	22	1	74.00	74.00
..............................................................................................TGGACGGAGAACTGATACGG...........................................................................................	20	1	73.00	73.00
..............................................................................................TGGACGCAGAACTGATAAGGGC.........................................................................................	22	1	73.00	73.00
..............................................................................................TGGACAGAGAACTGATAAGGGC.........................................................................................	22	1	73.00	73.00
..............................................................................................TGGACGGAAAACTGATAAGGGC.........................................................................................	22	1	72.00	72.00
..............................................................................................TGGACCGAGAACTGATAAGGGC.........................................................................................	22	1	68.00	68.00
..............................................................................................TGTACGGAGAACTGATAAGGGC.........................................................................................	22	1	67.00	67.00
..............................................................................................TGGACGGAGAACTGATAAGGCC.........................................................................................	22	1	66.00	66.00
..............................................................................................TGGACGGAGAACTGATAAGGT..........................................................................................	21	1	66.00	66.00
..............................................................................................TGGACGAAGAACTGATAAGGGC.........................................................................................	22	1	66.00	66.00
..............................................................................................TGAACGGAGAACTGATAAGGGC.........................................................................................	22	1	65.00	65.00
..............................................................................................TGCACGGAGAACTGATAAGGG..........................................................................................	21	1	52.00	52.00
..............................................................................................TGGACCGAGAACTGATAAGGG..........................................................................................	21	1	51.00	51.00
..............................................................................................TGGACGGATAACTGATAAGGG..........................................................................................	21	1	49.00	49.00
..............................................................................................TGGACGGAGAACTGATAAGGGCTTTT.....................................................................................	26	1	46.00	46.00
..............................................................................................TGGACGGAGAACTGATAAGGA..........................................................................................	21	1	44.00	44.00
..............................................................................................TGGACGGAGAACTGATAGGG...........................................................................................	20	1	42.00	42.00
..............................................................................................TGGACTGAGAACTGATAAGGGC.........................................................................................	22	1	42.00	42.00
..............................................................................................TGTACGGAGAACTGATAAGGG..........................................................................................	21	1	42.00	42.00
..............................................................................................TGGACGCAGAACTGATAAGGG..........................................................................................	21	1	41.00	41.00
..............................................................................................TGGCCGGAGAACTGATAAGGGC.........................................................................................	22	1	40.00	40.00
..............................................................................................TGGACGGAGAACTGATATGG...........................................................................................	20	1	40.00	40.00
..............................................................................................TGGACGAAGAACTGATAAGGG..........................................................................................	21	1	40.00	40.00
..............................................................................................TGGACGGAGAACTGATAAGGGTT........................................................................................	23	1	39.00	39.00
..............................................................................................TGGACGGAGAACTGATAACGGC.........................................................................................	22	1	37.00	37.00
..............................................................................................TGGACGGAAAACTGATAAGGG..........................................................................................	21	1	37.00	37.00
..............................................................................................TGGACGGAGAAATGATAAGGGC.........................................................................................	22	1	34.00	34.00
..............................................................................................TGGACGGAGAACTGATAAGGGCC........................................................................................	23	1	33.00	33.00
..............................................................................................TCGACGGAGAACTGATAAGGGC.........................................................................................	22	1	32.00	32.00
..............................................................................................TGAACGGAGAACTGATAAGGG..........................................................................................	21	1	31.00	31.00
..............................................................................................TGGACAGAGAACTGATAAGGG..........................................................................................	21	1	31.00	31.00
..............................................................................................TGGACGGAGAACTGATAAGGGCAT.......................................................................................	24	1	30.00	30.00
..............................................................................................TGGACGGAGAACTGACAAGGGC.........................................................................................	22	1	30.00	30.00
..............................................................................................TGGACGGAGAACTGATAAGGTC.........................................................................................	22	1	30.00	30.00
..............................................................................................TGGACGGAGAACTGATAAGCG..........................................................................................	21	1	29.00	29.00
.............................................................................................CTGGACGGAGAACTGATAAGGGC.........................................................................................	23	1	28.00	28.00
..............................................................................................TGGACGTAGAACTGATAAGGGC.........................................................................................	22	1	28.00	28.00
..............................................................................................TGGACTGAGAACTGATAAGGG..........................................................................................	21	1	28.00	28.00
..............................................................................................TGGATGGAGAACTGATAAGGGC.........................................................................................	22	1	27.00	27.00
..............................................................................................TGGAAGGAGAACTGATAAGGGC.........................................................................................	22	1	26.00	26.00
..............................................................................................TGGACGGAGAACTGATAAAGGC.........................................................................................	22	1	26.00	26.00
..............................................................................................TGGACGGAGAACTGATAACGG..........................................................................................	21	1	25.00	25.00
..............................................................................................TGGACGGAGAACTGATAAGCGC.........................................................................................	22	1	25.00	25.00
..............................................................................................TGGACGGAGAACTGATAAGGC..........................................................................................	21	1	25.00	25.00
...............................................................................................TGACGGAGAACTGATAAGGGC.........................................................................................	21	1	25.00	25.00
..............................................................................................TGGACGGAGAAATGATAAGGG..........................................................................................	21	1	25.00	25.00
..............................................................................................TTGACGGAGAACTGATAAGGGC.........................................................................................	22	1	24.00	24.00
..............................................................................................TGGACGGCGAACTGATAAGGGC.........................................................................................	22	1	24.00	24.00
.............................................................................................CTGGACGGAGAACTGATAAGGG..........................................................................................	22	1	24.00	24.00
..............................................................................................TGGACGGAGAACTGCTAAGGGC.........................................................................................	22	1	24.00	24.00
..............................................................................................TGGACGGAGAACTGATAATGGC.........................................................................................	22	1	23.00	23.00
..............................................................................................TGGACGGAGCACTGATAAGGG..........................................................................................	21	1	23.00	23.00
.......................................................CCTTATCATTCTCTCGCCCCGT................................................................................................................................	22	1	23.00	23.00
..............................................................................................TGGACGGCGAACTGATAAGGG..........................................................................................	21	1	23.00	23.00
..............................................................................................TGGACGGAGCACTGATAAGGGC.........................................................................................	22	1	23.00	23.00
..............................................................................................TGGACGGAGGACTGATAAGGGC.........................................................................................	22	1	22.00	22.00
..............................................................................................TGGACGGAGAACTGATACGGGCT........................................................................................	23	1	22.00	22.00
..............................................................................................TGGACGGAGAACTGACAAGGG..........................................................................................	21	1	22.00	22.00
..............................................................................................TGGACGGGGAACTGATAAGGGC.........................................................................................	22	1	21.00	21.00
..............................................................................................TGGACGGAGAACTGATAAGGAC.........................................................................................	22	1	21.00	21.00
..............................................................................................TGGACGGAGAACTGATAAGAGC.........................................................................................	22	1	20.00	20.00
..............................................................................................TGGACGGAGAACTGCTAAGGG..........................................................................................	21	1	20.00	20.00
..............................................................................................TGGACGGAGAACCGATAAGGGC.........................................................................................	22	1	20.00	20.00
..............................................................................................TGGAAGGAGAACTGATAAGGG..........................................................................................	21	1	19.00	19.00
..............................................................................................TGGGCGGAGAACTGATAAGGGC.........................................................................................	22	1	19.00	19.00
..............................................................................................TGGACGAAGAACTGATAAGG...........................................................................................	20	1	19.00	19.00
..............................................................................................CGGACGGAGAACTGATAAGGGC.........................................................................................	22	1	18.00	18.00
..............................................................................................TGGACGGATAACTGATAAGG...........................................................................................	20	1	18.00	18.00
..............................................................................................TGGACGGAGAACTGATAAGGGTTT.......................................................................................	24	1	18.00	18.00
..............................................................................................TGGACGGGGAACTGATAAGGG..........................................................................................	21	1	17.00	17.00
..............................................................................................TGGACGGAGAACTCATAAGGGC.........................................................................................	22	1	17.00	17.00
..............................................................................................TGGACGGAGAGCTGATAAGGGC.........................................................................................	22	1	17.00	17.00
..............................................................................................TGGACGGAGAACTGATCAGGG..........................................................................................	21	1	16.00	16.00
..............................................................................................TGGACGGAGAACTGGTAAGGGC.........................................................................................	22	1	16.00	16.00
..............................................................................................TGCACGGAGAACTGATAAGG...........................................................................................	20	1	16.00	16.00
..............................................................................................TGGACGGAGAACTGGTAAGGG..........................................................................................	21	1	16.00	16.00
..............................................................................................TGGACGGAGAGCTGATAAGGG..........................................................................................	21	1	16.00	16.00
..............................................................................................TGGACCGAGAACTGATAAGG...........................................................................................	20	1	15.00	15.00
..............................................................................................TGGACGGAGACCTGATAAGGGC.........................................................................................	22	1	15.00	15.00
..............................................................................................TCGACGGAGAACTGATAAGGG..........................................................................................	21	1	15.00	15.00
..............................................................................................TGGACGGAGAACTGATAAGGGCG........................................................................................	23	1	15.00	15.00
..............................................................................................TAGACGGAGAACTGATAAGGGC.........................................................................................	22	1	15.00	15.00

Generated: 04/20/2012 at 05:20:41 EDT

dme-mir-184

chr2R:9216907-9217006 -

Known_mirbase

intergenic

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Legend

Re-alignment after removal of non-confident orthologs

20-way Secondary Structure

Small RNA-seq read pileup