dme-mir-184- 12- and 20-way alignments

dme-mir-184	chr2R:9216907-9217006 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 9216925-9216946
   star strand at position 9216964-9216985
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chr2R:9216892-9217021 -	CT--GGGCT--GACCCG---A----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAACCAATAC--------------------CCATT
droSim1	chr2R:7673827-7673955 -	CT--GGGCT--GACCCG---A----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAATCC--------------------CCATT
droSec1	super_1:6740004-6740132 -	TT--GGGCT--GACCCG---A----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAATCT--------------------CCATT
droYak2	chr2R:7742247-7742374 +	CT--GGGCT--GACCCG---A----G----TGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCAT-TGAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAATCC--------------------CCATT
droEre2	scaffold_4845:16598085-16598213 +	CT--GGGCT--GACCCG---A----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCGTCAAG-CAATCC--------------------CCAGT
droAna3	scaffold_13266:16524564-16524693 -	CCCAGTGCC--GG-----CGA----G-----TCCGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGG-TTGTCCA------------------TCCATC
dp4	Unknown	CG--GGGTC--GGCCCGGGGACTCCG----GGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAC-TAATCCTGCGGGGAGGAAAGTCAAGTCCCTT
droPer1	Unknown	CG--GGGTC--GGCCCGGGGACTCCG----GGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAC-TAATCCTGCGGGGAGGAAAGTCAAGTCCCTT
droWil1	scaffold_181009:2073162-2073290 -	GT--GGATCTAGACGCGAAGAGTCAGTTAAAGCTGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCAACA----------------------------------
droVir3	scaffold_12875:243286-243393 +	TT--GGGCT-----------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAA--------------------------------
droMoj3	scaffold_6496:5255795-5255902 -	TT--GGGCA-----------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAA--------------------------------
droGri2	scaffold_15245:10719553-10719657 -	AT--GGT------------------------TTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGGATAACTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chr2R:9216892-9217021 -	NA	CT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAACCAAT-----------------------------AC-------------------------CCATT--
droSim1	chr2R:7673827-7673955 -	1	CT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CC-------------------------CCATT--
droSec1	super_1:6740004-6740132 -	1	TT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CT-------------------------CCATT--
droYak2	chr2R:7742247-7742374 +	2	CT--GGGCTGA-----------------CCCGAGTGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATT-GAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CC-------------------------CCATT--
droEre2	scaffold_4845:16598085-16598213 +	1	CT--GGGCTGA-----------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCGTCAAGC-AAT-----------------------------CC-------------------------CCAGT--
droEug1	scf7180000409663:1025828-1025957 -	1	GT--AGGCTGA---T-------------CCCAAGGATTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGA-AAT-----------------------------CC-------------------------CCATG--
droBia1	scf7180000302291:976390-976518 +	1	CT--AGGCTGA-----------------CCCAAGGGCTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGT-AAT-----------------------------TC-------------------------CCGTA--
droTak1	scf7180000415379:383248-383376 -	1	CT--GGGCTGA-----------------CCCTCGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACGACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGT-AAT-----------------------------CC-------------------------CTATG--
droEle1	scf7180000491282:440692-440819 -	11	CT--TGGCTGA-----------------CCTCAGGGTTGGTCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCATGTCATCAATA-GGT-----------------------------CT-------------------------ATAT---
droRho1	scf7180000779889:44621-44736 -	1	CT--AGGCTGA-----------------CCTCAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATT-CAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAGTTCATCAA---------------------------------------------------------------------
droFic1	scf7180000454039:23850-23978 -	2	CT--GGGCTGA-----------------TCGAAGGATTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTACAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAGA-AAT-----------------------------CC-------------------------CCATT--
droKik1	scf7180000302277:621916-622079 +	1	CG--AGGCTAA---CCCTGCATAA------TGGGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCGTAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCGATTCATCAAGC-TGT-----------------------------TGCCACGAGGAAATCCCAGCAAATTACCCGTTCC
droAna3	scaffold_13266:16524568-16524693 -	1	CCCAGTGCCGG--------------------CGAGTCCGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGGT-TGT--------------------------------------------------------CCATC--
droBip1	scf7180000396384:634133-634283 -	1	CA--AGTGTAT-----------------CTGAGAGCGCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGGT-TGT--------CAATTCATCAGTTGGGAGTTTCC-------------------------CCAAA--
dp4	chr3:696696-696816 +	7	----GGGTCGG----CCCGGGGAC------TCCGGGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------------------------------------------
droPer1	super_2:863138-863258 +	2	----GGGTCGG----CCCGGGGAC------TCCGGGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------------------------------------------
droWil1	scaffold_181009:2073162-2073280 -	1	AC--GCGAAGA-------------GTCAGT-TAAAGCTGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCAACA----------------------------------------------------------------------
droVir3	scaffold_12875:243286-243412 +	4	TT--GGGCT---------------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAAC-TAAGTGCAGCA---------------------AC-------------------------TATTT--
droMoj3	scaffold_6496:5255786-5255918 -	3	AA--TGGCCAATCTGCCGT-----------TGGGCATTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAA---AT-----------------------------AC-------------------------ATGCG--
droGri2	scaffold_15245:10719551-10719668 -	8	CC--AGCCTGC-----------------ATATGGTTTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGGATAACTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAA--------------------------------------------------------------------

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

CT--GGGCT--GACCCG---A----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAACCAATAC--------------------CCATT

Size

Hit Count

Total Norm

droSim1

CT--GGGCT--GACCCG---A----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAATCC--------------------CCATT	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
..........................................................................................TGGACGGAGAACTGATAAGGGC.....................................................	22	1	999760.00	134335.00	477728.00	198580.00	189117.00
..........................................................................................TGGACGGAGAACTGATAAGGG......................................................	21	1	90006.00	14525.00	53511.00	15847.00	6123.00
..........................................................................................TGGACGGAGAACTGATAAGG.......................................................	20	1	44398.00	1613.00	31478.00	10278.00	1029.00
..........................................................................................TGGACGGAGAACTGATAAGGGCA....................................................	23	1	39930.00	1467.00	23264.00	6973.00	8226.00
..........................................................................................TGGACGGAGAACTGATAAG........................................................	19	1	39474.00	72.00	29740.00	8359.00	1303.00
..........................................................................................TGGACGGAGAACTGATAAGGGCT....................................................	23	1	23810.00	671.00	12559.00	9072.00	1508.00
..........................................................................................TGGACGGAGAACTGATAAGGAC.....................................................	22	1	18908.00	87.00	11316.00	3788.00	3717.00
..........................................................................................TGGACGGAGAACTGATAA.........................................................	18	1	17147.00	1.00	12959.00	3585.00	602.00
..........................................................................................TGGACGGAGAACTGATAAGGGA.....................................................	22	1	13118.00	722.00	8564.00	2596.00	1236.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTT...................................................	24	1	12973.00	99.00	4197.00	7987.00	690.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAT...................................................	24	1	7818.00	97.00	4276.00	2490.00	955.00
..........................................................................................TGGACGGAGAACTGATAAGGGT.....................................................	22	1	6187.00	612.00	3784.00	1515.00	276.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTT..................................................	25	1	5680.00	13.00	1230.00	4291.00	146.00
..........................................................................................TGGACGGAGAACTGATAAA........................................................	19	1	4304.00	0.00	3398.00	814.00	92.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTTT.................................................	26	1	4169.00	0.00	416.00	3701.00	52.00
..........................................................................................TGGACGGAGAACTGATAAGGGCC....................................................	23	1	4023.00	139.00	2333.00	1096.00	455.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAA...................................................	24	1	2828.00	114.00	202.00	216.00	2296.00
..........................................................................................TGGACGGAGAACTGATAAGGA......................................................	21	1	2629.00	13.00	1810.00	748.00	58.00
..........................................................................................TGGACGGAGAACTGATAAGGGG.....................................................	22	1	2391.00	248.00	1214.00	535.00	394.00
..........................................................................................TGGACGGAGAACTGATAAGGGCG....................................................	23	1	2160.00	12.00	1095.00	616.00	437.00
..........................................................................................TGGACGGAGAACTGATAAGGGAA....................................................	23	1	2154.00	70.00	1458.00	240.00	386.00
..........................................................................................TGGACGGAGAACTGATAAGGGTT....................................................	23	1	1616.00	5.00	969.00	610.00	32.00
..........................................................................................TGGACGGAGAACTGATAGGGGC.....................................................	22	1	1613.00	122.00	1061.00	220.00	210.00
..........................................................................................TGGACGGAGAACTGATAAGA.......................................................	20	1	1541.00	0.00	1260.00	267.00	14.00
..........................................................................................TTGACGGAGAACTGATAAGGGC.....................................................	22	1	1378.00	29.00	524.00	222.00	603.00
..........................................................................................TGGACGGAGCACTGATAAGGGC.....................................................	22	1	1292.00	799.00	394.00	48.00	51.00
..........................................................................................TGGGCGGAGAACTGATAAGGGC.....................................................	22	1	1285.00	192.00	567.00	261.00	265.00
..........................................................................................TGGACGGAGAACTGATAAGCGC.....................................................	22	1	1193.00	218.00	597.00	112.00	266.00
..........................................................................................TGGACGGAGAACTGATAAGGT......................................................	21	1	1185.00	20.00	738.00	418.00	9.00
..........................................................................................TGGACGGAGAACTGATAAGGGAT....................................................	23	1	1168.00	7.00	604.00	502.00	55.00
..........................................................................................TGGACTGAGAACTGATAAGGGC.....................................................	22	1	1167.00	32.00	864.00	163.00	108.00
..........................................................................................TGGACGGAGAACTGATAAGT.......................................................	20	1	1114.00	1.00	818.00	291.00	4.00
..........................................................................................TGGACGGAGAGCTGATAAGGGC.....................................................	22	1	1096.00	241.00	470.00	206.00	179.00
..........................................................................................TGGACGGAGAACTGATAAGTGC.....................................................	22	1	996.00	238.00	495.00	92.00	171.00
..........................................................................................TGGACGGAGAACTGATAAGGGTTT...................................................	24	1	966.00	0.00	413.00	541.00	12.00
..........................................................................................TGGACGGGGAACTGATAAGGGC.....................................................	22	1	952.00	211.00	307.00	228.00	206.00
..........................................................................................TGGACCGAGAACTGATAAGGGC.....................................................	22	1	906.00	20.00	598.00	87.00	201.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTAT..................................................	25	1	898.00	1.00	252.00	572.00	73.00
..........................................................................................TGGACGGAGAACTGGTAAGGGC.....................................................	22	1	833.00	263.00	312.00	146.00	112.00
..........................................................................................TGGAAGGAGAACTGATAAGGGC.....................................................	22	1	814.00	754.00	13.00	35.00	12.00
..........................................................................................CGGACGGAGAACTGATAAGGGC.....................................................	22	1	768.00	200.00	301.00	118.00	149.00
..........................................................................................TGGACGGAGGACTGATAAGGGC.....................................................	22	1	761.00	342.00	182.00	119.00	118.00
..........................................................................................TGGACGGAGAACTGATGAGGGC.....................................................	22	1	725.00	150.00	318.00	144.00	113.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTA...................................................	24	1	698.00	15.00	201.00	407.00	75.00
..........................................................................................TGGACGGAGAACTGATAG.........................................................	18	1	681.00	0.00	471.00	134.00	76.00
..........................................................................................TGGACGGATAACTGATAAGGGC.....................................................	22	1	656.00	22.00	414.00	128.00	92.00
..........................................................................................TGGACGGAGAACTCATAAGGGC.....................................................	22	1	605.00	52.00	330.00	56.00	167.00
..........................................................................................TGGATGGAGAACTGATAAGGGC.....................................................	22	1	602.00	209.00	216.00	91.00	86.00
..........................................................................................TGGACGGAGAACTGCTAAGGGC.....................................................	22	1	564.00	522.00	24.00	7.00	11.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAC...................................................	24	1	554.00	9.00	339.00	94.00	112.00
..........................................................................................TGGACGGAGAACTGATAATGGC.....................................................	22	1	553.00	254.00	189.00	38.00	72.00
...........................................................................................TGACGGAGAACTGATAAGGGC.....................................................	21	1	550.00	17.00	257.00	83.00	193.00
..........................................................................................TGGACGGAGAACCGATAAGGGC.....................................................	22	1	515.00	148.00	190.00	96.00	81.00
...........................................................................................GGACGGAGAACTGATAAGGGC.....................................................	21	1	506.00	46.00	256.00	111.00	93.00
............................................................................................GACGGAGAACTGATAAGGGC.....................................................	20	1	465.00	17.00	184.00	69.00	195.00
..........................................................................................TGGACGGAGAACTGATAAGGTC.....................................................	22	1	461.00	69.00	208.00	63.00	121.00
..........................................................................................TGGACGGAGAACTGATAAAGGC.....................................................	22	1	453.00	230.00	135.00	46.00	42.00
..........................................................................................TAGACGGAGAACTGATAAGGGC.....................................................	22	1	451.00	118.00	161.00	82.00	90.00
..........................................................................................TGTACGGAGAACTGATAAGGGC.....................................................	22	1	434.00	16.00	204.00	74.00	140.00
..........................................................................................TGGACGGAGAACTGATAAGGCC.....................................................	22	1	421.00	51.00	143.00	96.00	131.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTC...................................................	24	1	417.00	6.00	205.00	184.00	22.00
..........................................................................................TGGACGGAGAACTGATCAGGGC.....................................................	22	1	413.00	394.00	7.00	3.00	9.00
..........................................................................................TGGACGGAGAACTTATAAGGGC.....................................................	22	1	406.00	30.00	206.00	68.00	102.00
..........................................................................................TGGACGGAGAACTGACAAGGGC.....................................................	22	1	398.00	162.00	126.00	72.00	38.00
.........................................................................................CTGGACGGAGAACTGATAAGGGC.....................................................	23	1	398.00	193.00	98.00	36.00	71.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTAT.................................................	26	1	397.00	0.00	115.00	277.00	5.00
..........................................................................................TGGACGGACAACTGATAAGGGC.....................................................	22	1	386.00	34.00	215.00	77.00	60.00
..........................................................................................TGGACGGAGAACTGATAACGGC.....................................................	22	1	378.00	144.00	154.00	24.00	56.00
..........................................................................................TGGACAGAGAACTGATAAGGGC.....................................................	22	1	371.00	101.00	142.00	60.00	68.00
..........................................................................................TGGACGGAGAAATGATAAGGGC.....................................................	22	1	361.00	236.00	59.00	32.00	34.00
..........................................................................................TCGACGGAGAACTGATAAGGGC.....................................................	22	1	343.00	38.00	132.00	44.00	129.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTA..................................................	25	1	334.00	0.00	95.00	227.00	12.00
..........................................................................................TGGACGGAGAACTGATAAGGAA.....................................................	22	1	324.00	1.00	184.00	113.00	26.00
..........................................................................................TGGACGGAGAACTGATAAGAGC.....................................................	22	1	319.00	127.00	108.00	33.00	51.00
..........................................................................................TGGACGGAGAACTGATAT.........................................................	18	1	314.00	0.00	240.00	72.00	2.00
..........................................................................................TGGACGGAGTACTGATAAGGGC.....................................................	22	1	310.00	245.00	20.00	23.00	22.00
..........................................................................................AGGACGGAGAACTGATAAGGGC.....................................................	22	1	296.00	113.00	86.00	44.00	53.00
..........................................................................................TGGACGGAGAACTAATAAGGGC.....................................................	22	1	294.00	64.00	130.00	50.00	50.00
..........................................................................................TGGACGGAGAACTGATACGGGC.....................................................	22	1	293.00	239.00	33.00	13.00	8.00
..........................................................................................TGGACGGAGACCTGATAAGGGC.....................................................	22	1	292.00	243.00	39.00	5.00	5.00
..........................................................................................GGGACGGAGAACTGATAAGGGC.....................................................	22	1	285.00	164.00	69.00	27.00	25.00
..........................................................................................TGGACGGAGAACTGATAAGGGCCT...................................................	24	1	267.00	17.00	122.00	105.00	23.00
..........................................................................................TGCACGGAGAACTGATAAGGGC.....................................................	22	1	244.00	35.00	89.00	31.00	89.00
..........................................................................................TGAACGGAGAACTGATAAGGGC.....................................................	22	1	244.00	79.00	96.00	32.00	37.00
..........................................................................................TGGACGGAGAACTGATAAGGC......................................................	21	1	230.00	13.00	137.00	60.00	20.00
..........................................................................................TGGACGGAGAACTGATAAAA.......................................................	20	1	229.00	0.00	171.00	28.00	30.00
..........................................................................................TGGACGGAGAACTGATAAGGTT.....................................................	22	1	210.00	4.00	93.00	111.00	2.00
..........................................................................................TGGACGGAGAACTTATAAG........................................................	19	1	203.00	0.00	172.00	29.00	2.00
..........................................................................................TGGACTGAGAACTGATAAGGG......................................................	21	1	198.00	1.00	151.00	36.00	10.00
..........................................................................................TGGACGGAGAACTGATAAT........................................................	19	1	193.00	0.00	147.00	45.00	1.00
..........................................................................................TGGACGGCGAACTGATAAGGGC.....................................................	22	1	186.00	121.00	21.00	19.00	25.00
..........................................................................................TGGACGCAGAACTGATAAGGGC.....................................................	22	1	185.00	13.00	124.00	18.00	30.00
..........................................................................................TGGACGGAGAATTGATAAGGGC.....................................................	22	1	184.00	48.00	86.00	30.00	20.00
..........................................................................................TGGACGGAGAACTGATTT.........................................................	18	1	179.00	0.00	113.00	66.00	0.00
..........................................................................................TGGACGGAGAACTGAGAAGGGC.....................................................	22	1	176.00	146.00	15.00	11.00	4.00
..........................................................................................TGGACGGAGCACTGATAAGGG......................................................	21	1	175.00	114.00	53.00	5.00	3.00
..........................................................................................TGGACGGAGAACTGATAAC........................................................	19	1	175.00	0.00	141.00	25.00	9.00
..........................................................................................TGGACGGAGAACTGATAAGGGCCA...................................................	24	1	167.00	13.00	64.00	65.00	25.00
..........................................................................................TGGACGGAAAACTGATAAGGGC.....................................................	22	1	164.00	28.00	91.00	28.00	17.00
..........................................................................................TGGACGGAGAACTGATAAGGGTA....................................................	23	1	161.00	5.00	88.00	46.00	22.00
.........................................................................................GTGGACGGAGAACTGATAAGGGC.....................................................	23	1	160.00	0.00	87.00	25.00	48.00

droSec1

TT--GGGCT--GACCCG---A----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAATCT--------------------CCATT	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
..........................................................................................TGGACGGAGAACTGATAAGGGC.....................................................	22	1	1056659.00	215789.00	269456.00	571414.00
..........................................................................................TGGACGGAGAACTGATAAGGG......................................................	21	1	328180.00	84377.00	30326.00	213477.00
..........................................................................................TGGACGGAGAACTGATAAGG.......................................................	20	1	97596.00	37784.00	2904.00	56908.00
..........................................................................................TGGACGGAGAACTGATAAGGGT.....................................................	22	1	19023.00	8166.00	759.00	10098.00
..........................................................................................TGGACGGAGAACTGATAAGGGCT....................................................	23	1	17256.00	6546.00	2283.00	8427.00
..........................................................................................TGGACGGAGAACTGATAAG........................................................	19	1	13425.00	4079.00	188.00	9158.00
..........................................................................................TGGACGGAGAACTGATAAGGGA.....................................................	22	1	11164.00	3060.00	684.00	7420.00
..........................................................................................TGGACGGAGAACTGATAAGGGCA....................................................	23	1	8138.00	2376.00	1296.00	4466.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTT...................................................	24	1	5842.00	4031.00	355.00	1456.00
..........................................................................................TGGACGGAGAACTGATAAAGGC.....................................................	22	1	3538.00	1934.00	287.00	1317.00
..........................................................................................TGGACGGAGAACTGATAACGGC.....................................................	22	1	2822.00	2139.00	176.00	507.00
..........................................................................................TGGACGGAGAACTGATAAGGT......................................................	21	1	2478.00	1418.00	27.00	1033.00
..........................................................................................TGGACGGAGAACTGATAAGGGTT....................................................	23	1	2362.00	1179.00	28.00	1155.00
..........................................................................................TGGACGGAGAACTGATAATGGC.....................................................	22	1	2249.00	1236.00	153.00	860.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTT..................................................	25	1	2057.00	1628.00	56.00	373.00
.........................................................................................CTGGACGGAGAACTGATAAGGGC.....................................................	23	1	2020.00	281.00	535.00	1204.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAT...................................................	24	1	1960.00	1049.00	75.00	836.00
..........................................................................................TGGATGGAGAACTGATAAGGGC.....................................................	22	1	1728.00	172.00	924.00	632.00
..........................................................................................TGGACGGAGAACTGATAAGGCC.....................................................	22	1	1471.00	566.00	280.00	625.00
..........................................................................................TGGACGGAGAACTGATAAGGGCC....................................................	23	1	1450.00	420.00	409.00	621.00
..........................................................................................TGGACGGAGAGCTGATAAGGGC.....................................................	22	1	1361.00	244.00	477.00	640.00
..........................................................................................TTGACGGAGAACTGATAAGGGC.....................................................	22	1	1315.00	219.00	228.00	868.00
..........................................................................................TGTACGGAGAACTGATAAGGGC.....................................................	22	1	1288.00	237.00	217.00	834.00
..........................................................................................TGGACGGGGAACTGATAAGGGC.....................................................	22	1	1263.00	196.00	500.00	567.00
..........................................................................................CGGACGGAGAACTGATAAGGGC.....................................................	22	1	1149.00	268.00	310.00	571.00
..........................................................................................TGGACGGAGAACTGATAAAGG......................................................	21	1	1095.00	738.00	10.00	347.00
..........................................................................................TGGACGGAGAACTGATAAGGGTTT...................................................	24	1	1093.00	731.00	4.00	358.00
..........................................................................................TGGACTGAGAACTGATAAGGGC.....................................................	22	1	1091.00	96.00	192.00	803.00
..........................................................................................TGGACAGAGAACTGATAAGGGC.....................................................	22	1	1078.00	143.00	173.00	762.00
..........................................................................................TGGACGGAGGACTGATAAGGGC.....................................................	22	1	1074.00	176.00	418.00	480.00
..........................................................................................TGGACGGAGAACTGATAAGGA......................................................	21	1	1031.00	520.00	25.00	486.00
..........................................................................................TGGACGGATAACTGATAAGGGC.....................................................	22	1	1024.00	73.00	187.00	764.00
..........................................................................................TGGACGGAGAACCGATAAGGGC.....................................................	22	1	1016.00	245.00	321.00	450.00
..........................................................................................TGGACGGAGAACTGGTAAGGGC.....................................................	22	1	999.00	170.00	345.00	484.00
..........................................................................................TGGGCGGAGAACTGATAAGGGC.....................................................	22	1	983.00	170.00	362.00	451.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTTT.................................................	26	1	933.00	812.00	5.00	116.00
...........................................................................................TGACGGAGAACTGATAAGGGC.....................................................	21	1	922.00	149.00	268.00	505.00
..........................................................................................TGGACGAAGAACTGATAAGGGC.....................................................	22	1	920.00	65.00	66.00	789.00
..........................................................................................TAGACGGAGAACTGATAAGGGC.....................................................	22	1	906.00	119.00	173.00	614.00
..........................................................................................TGGACGGAGAACTGATAACGG......................................................	21	1	895.00	764.00	19.00	112.00
..........................................................................................TGGACGGAGAATTGATAAGGGC.....................................................	22	1	870.00	56.00	583.00	231.00
..........................................................................................TGGACGGAGAACTGATAAGAGC.....................................................	22	1	827.00	89.00	75.00	663.00
..........................................................................................TGGACGGAGACCTGATAAGGGC.....................................................	22	1	815.00	160.00	174.00	481.00
..........................................................................................TGCACGGAGAACTGATAAGGGC.....................................................	22	1	808.00	211.00	171.00	426.00
..........................................................................................TGGACGGAGAACTGATAGGGGC.....................................................	22	1	807.00	127.00	232.00	448.00
..........................................................................................TCGACGGAGAACTGATAAGGGC.....................................................	22	1	797.00	198.00	188.00	411.00
..........................................................................................TGGACGGAGAACTGACAAGGGC.....................................................	22	1	779.00	203.00	233.00	343.00
..........................................................................................TGGACGGAGAACTGATAATGG......................................................	21	1	766.00	466.00	5.00	295.00
..........................................................................................TGGACGGAGAACTGCTAAGGGC.....................................................	22	1	764.00	162.00	237.00	365.00
..........................................................................................TGGACGGAGAACTGATAAGGC......................................................	21	1	763.00	218.00	131.00	414.00
..........................................................................................TGGACGGAAAACTGATAAGGGC.....................................................	22	1	750.00	65.00	165.00	520.00
..........................................................................................TGGACGGACAACTGATAAGGGC.....................................................	22	1	743.00	113.00	147.00	483.00
..........................................................................................TGGACGGAGAACTGATAAGCGC.....................................................	22	1	735.00	152.00	131.00	452.00
..........................................................................................TGGACGGAGAACTGATAAGGTC.....................................................	22	1	732.00	212.00	93.00	427.00
..........................................................................................TGGACGxxGAACTGATAAGGGC.....................................................	20	1	657.00	40.00	429.00	188.00
..........................................................................................TGGACGGAGAACTGATAAGGAC.....................................................	22	1	653.00	148.00	101.00	404.00
..........................................................................................TGGACGTAGAACTGATAAGGGC.....................................................	22	1	639.00	53.00	45.00	541.00
..........................................................................................TGGACGGAGAACTGATGAGGGC.....................................................	22	1	634.00	81.00	216.00	337.00
..........................................................................................AGGACGGAGAACTGATAAGGGC.....................................................	22	1	622.00	59.00	68.00	495.00
..........................................................................................TGGACGGAGAACTGATAAGTGC.....................................................	22	1	619.00	67.00	77.00	475.00
..........................................................................................TGGACGGAGAACTGATAAGGGCCT...................................................	24	1	583.00	225.00	71.00	287.00
..........................................................................................TGTACGGAGAACTGATAAGGG......................................................	21	1	552.00	96.00	25.00	431.00
.........................................................................................CTGGACGGAGAACTGATAAGGG......................................................	22	1	537.00	100.00	59.00	378.00
..........................................................................................TGGACCGAGAACTGATAAGGGC.....................................................	22	1	537.00	93.00	96.00	348.00
..........................................................................................TGGACGCAGAACTGATAAGGGC.....................................................	22	1	532.00	96.00	94.00	342.00
..........................................................................................TTGACGGAGAACTGATAAGGG......................................................	21	1	529.00	94.00	29.00	406.00
..........................................................................................TGGACGGAGCACTGATAAGGGC.....................................................	22	1	529.00	123.00	207.00	199.00
..........................................................................................TGGCCGGAGAACTGATAAGGGC.....................................................	22	1	506.00	213.00	91.00	202.00
...................................................CCTTATCATTCTCTCGCCCCGT............................................................................................	22	1	500.00	117.00	346.00	37.00
..........................................................................................TGGACGGCGAACTGATAAGGGC.....................................................	22	1	483.00	118.00	92.00	273.00
..........................................................................................TGGACGGAGAAATGATAAGGGC.....................................................	22	1	475.00	47.00	202.00	226.00
..........................................................................................TGGACGGAGAACTTATAAGGGC.....................................................	22	1	468.00	72.00	76.00	320.00
..........................................................................................TGGATGGAGAACTGATAAGGG......................................................	21	1	453.00	69.00	109.00	275.00
..........................................................................................TGGAAGGAGAACTGATAAGGGC.....................................................	22	1	428.00	45.00	37.00	346.00
..........................................................................................TGGACTGAGAACTGATAAGGG......................................................	21	1	426.00	65.00	19.00	342.00
..........................................................................................TGGACGGAGAACTGATAAGGGAA....................................................	23	1	424.00	152.00	69.00	203.00
..........................................................................................TGGACGGAGAACTAATAAGGGC.....................................................	22	1	421.00	70.00	117.00	234.00
..........................................................................................TGGACGGAGAACTGATCAGGGC.....................................................	22	1	414.00	86.00	157.00	171.00
..........................................................................................TGGACAGAGAACTGATAAGGG......................................................	21	1	411.00	55.00	9.00	347.00
..........................................................................................TGGACGGAGAACTGATAAGGGAT....................................................	23	1	406.00	256.00	15.00	135.00
..........................................................................................TGGACGGAGAGCTGATAAGGG......................................................	21	1	395.00	83.00	66.00	246.00
..........................................................................................TGGACGGAGAACTGATAAAG.......................................................	20	1	394.00	304.00	2.00	88.00
...........................................................................................GGACGGAGAACTGATAAGGGC.....................................................	21	1	390.00	105.00	90.00	195.00
..........................................................................................TGCACGGAGAACTGATAAGGG......................................................	21	1	386.00	64.00	22.00	300.00
..........................................................................................TGGACGGAGAACTCATAAGGGC.....................................................	22	1	382.00	99.00	95.00	188.00
..........................................................................................TGGACGGAGAACTGATAAGGGCCA...................................................	24	1	372.00	181.00	27.00	164.00
..........................................................................................TGGACGGGGAACTGATAAGGG......................................................	21	1	372.00	99.00	58.00	215.00
..........................................................................................TGGACGGTGAACTGATAAGGGC.....................................................	22	1	371.00	41.00	203.00	127.00
..........................................................................................TGAACGGAGAACTGATAAGGGC.....................................................	22	1	365.00	66.00	73.00	226.00
..........................................................................................TGGACGGAGAACTGATAACG.......................................................	20	1	349.00	314.00	1.00	34.00
...........................................................................................TGACGGAGAACTGATAAGGG......................................................	20	1	348.00	73.00	29.00	246.00
..........................................................................................TGGACGGATAACTGATAAGGG......................................................	21	1	346.00	28.00	16.00	302.00
..........................................................................................GGGACGGAGAACTGATAAGGGC.....................................................	22	1	346.00	35.00	61.00	250.00
..........................................................................................TGGACGGAGAACTGCTAAGGG......................................................	21	1	345.00	107.00	43.00	195.00
..........................................................................................TGGACGGAGAACTGATAAGT.......................................................	20	1	342.00	197.00	1.00	144.00
..........................................................................................CGGACGGAGAACTGATAAGGG......................................................	21	1	340.00	82.00	45.00	213.00
..........................................................................................TGGACGGAGAACTGATACGGGC.....................................................	22	1	326.00	71.00	89.00	166.00
..........................................................................................TGGACGGAGGACTGATAAGGG......................................................	21	1	325.00	83.00	53.00	189.00
..........................................................................................TGGACGGAGAACCGATAAGGG......................................................	21	1	313.00	86.00	40.00	187.00
..........................................................................................TGGACGGAGAACTGATATGGGC.....................................................	22	1	309.00	38.00	166.00	105.00
..........................................................................................TAGACGGAGAACTGATAAGGG......................................................	21	1	303.00	55.00	21.00	227.00

droYak2

CT--GGGCT--GACCCG---A----G----TGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCAT-TGAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAATCC--------------------CCATT	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
..........................................................................................TGGACGGAGAACTGATAAGGGC.....................................................	22	1	535491.00	86783.00	40764.00	71643.00	96403.00	239898.00
..........................................................................................TGGACGGAGAACTGATAAGGG......................................................	21	1	177593.00	7097.00	34649.00	34117.00	83801.00	17929.00
..........................................................................................TGGACGGAGAACTGATAAGG.......................................................	20	1	53034.00	944.00	8648.00	14539.00	21658.00	7245.00
..........................................................................................TGGACGGAGAACTGATAAGGGCT....................................................	23	1	14703.00	487.00	1349.00	2667.00	3596.00	6604.00
..........................................................................................TGGACGGAGAACTGATAAG........................................................	19	1	14223.00	40.00	1957.00	1475.00	4678.00	6073.00
..........................................................................................TGGACGGAGAACTGATAAGGGCA....................................................	23	1	10531.00	425.00	808.00	1061.00	2017.00	6220.00
..........................................................................................TGGACGGAGAACTGATAAGGGA.....................................................	22	1	8457.00	362.00	1096.00	980.00	2979.00	3040.00
..........................................................................................TGGACGGAGAACTGATAAGGGT.....................................................	22	1	7616.00	194.00	1139.00	2035.00	3085.00	1163.00
..........................................................................................TGGACGGAGAACTGATAAGGAC.....................................................	22	1	6493.00	59.00	23.00	66.00	93.00	6252.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTT...................................................	24	1	3960.00	26.00	111.00	808.00	278.00	2737.00
..........................................................................................TGGACGGAGAACTGATAA.........................................................	18	1	3029.00	1.00	68.00	4.00	125.00	2831.00
..........................................................................................TGGACGGAGCACTGATAAGGGC.....................................................	22	1	1751.00	395.00	196.00	32.00	784.00	344.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAT...................................................	24	1	1663.00	15.00	62.00	211.00	128.00	1247.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTT..................................................	25	1	1566.00	6.00	17.00	342.00	47.00	1154.00
..........................................................................................TGGACGGAGAACTGATACGGG......................................................	21	1	1515.00	26.00	143.00	19.00	1327.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGGT......................................................	21	1	1416.00	5.00	206.00	338.00	658.00	209.00
..........................................................................................TGGACGGAGAACTGATAAGGGCC....................................................	23	1	1368.00	49.00	44.00	84.00	121.00	1070.00
..........................................................................................TGGACGGAGCACTGATAAGGG......................................................	21	1	1121.00	46.00	226.00	16.00	809.00	24.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTTT.................................................	26	1	1102.00	2.00	3.00	179.00	9.00	909.00
..........................................................................................TGGACGGAGAACTGATAAGTGC.....................................................	22	1	1055.00	70.00	139.00	30.00	581.00	235.00
..........................................................................................TGGACGGAGAACTGCTAAGGG......................................................	21	1	1010.00	17.00	151.00	82.00	756.00	4.00
..........................................................................................TGGACGGAGAACTGCTAAGGGC.....................................................	22	1	1008.00	175.00	122.00	87.00	609.00	15.00
..........................................................................................TGGACGGAGGACTGATAAGGGC.....................................................	22	1	973.00	179.00	110.00	49.00	551.00	84.00
..........................................................................................TGGACGGAGAACTGATAAGGTC.....................................................	22	1	948.00	34.00	106.00	145.00	541.00	122.00
..........................................................................................TGGACGGAGAGCTGATAAGGGC.....................................................	22	1	863.00	152.00	87.00	70.00	286.00	268.00
..........................................................................................TGGGCGGAGAACTGATAAGGGC.....................................................	22	1	860.00	144.00	84.00	46.00	320.00	266.00
..........................................................................................TGGACGGAGAACTGATACGGGC.....................................................	22	1	832.00	161.00	51.00	20.00	583.00	17.00
..........................................................................................TGGACGGAGAACTGATAAGGGG.....................................................	22	1	824.00	160.00	63.00	9.00	70.00	522.00
..........................................................................................TGGACGGAGAACTGATAAGCGC.....................................................	22	1	818.00	107.00	89.00	22.00	344.00	256.00
..........................................................................................TGGACGGAGAACTGATAAGTG......................................................	21	1	807.00	12.00	182.00	25.00	588.00	0.00
..........................................................................................TGGAAGGAGAACTGATAAGGGC.....................................................	22	1	796.00	340.00	94.00	5.00	345.00	12.00
..........................................................................................TGGACGGAGAACTGATAAGGA......................................................	21	1	763.00	5.00	81.00	119.00	221.00	337.00
..........................................................................................TGGACGGAGAACTGATCAGGG......................................................	21	1	747.00	30.00	217.00	16.00	481.00	3.00
..........................................................................................TGGACGGGGAACTGATAAGGGC.....................................................	22	1	737.00	124.00	82.00	59.00	314.00	158.00
..........................................................................................TGGACGGAGGACTGATAAGGG......................................................	21	1	730.00	14.00	138.00	31.00	539.00	8.00
..........................................................................................TGGACGGAGAACTGATAGGGGC.....................................................	22	1	719.00	78.00	43.00	45.00	167.00	386.00
..........................................................................................TGGACGGAGAACTGATAATGGC.....................................................	22	1	686.00	84.00	166.00	63.00	288.00	85.00
..........................................................................................TGGACGGAGAACTGATAAGGGTT....................................................	23	1	681.00	5.00	54.00	188.00	179.00	255.00
..........................................................................................TGGACGGAGAACTGATAAGGCC.....................................................	22	1	679.00	20.00	23.00	328.00	189.00	119.00
..........................................................................................TGGACGGAGACCTGATAAGGGC.....................................................	22	1	661.00	115.00	33.00	81.00	419.00	13.00
..........................................................................................TGGACGGAGTACTGATAAGGGC.....................................................	22	1	644.00	124.00	40.00	7.00	454.00	19.00
..........................................................................................TGGACGGAGAACTGATAAGGGCG....................................................	23	1	638.00	6.00	24.00	13.00	59.00	536.00
..........................................................................................TGGACGGAGAACTGGTAAGGGC.....................................................	22	1	620.00	147.00	54.00	59.00	211.00	149.00
..........................................................................................TGGACGGAGAACTGATAAGGGAA....................................................	23	1	613.00	20.00	38.00	54.00	111.00	390.00
..........................................................................................TGGACGGAGAACTGATAAAGGC.....................................................	22	1	609.00	215.00	185.00	55.00	106.00	48.00
..........................................................................................TAGACGGAGAACTGATAAGGGC.....................................................	22	1	590.00	131.00	220.00	48.00	89.00	102.00
..........................................................................................TGGACGGAGAACTGATCAGGGC.....................................................	22	1	571.00	181.00	122.00	20.00	240.00	8.00
..........................................................................................CGGACGGAGAACTGATAAGGGC.....................................................	22	1	569.00	98.00	58.00	91.00	203.00	119.00
..........................................................................................TTGACGGAGAACTGATAAGGGC.....................................................	22	1	546.00	14.00	9.00	79.00	32.00	412.00
.........................................................................................CTGGACGGAGAACTGATAAGGGC.....................................................	23	1	532.00	115.00	64.00	127.00	176.00	50.00
..........................................................................................TGGACGGAGTACTGATAAGGG......................................................	21	1	518.00	17.00	40.00	3.00	455.00	3.00
..........................................................................................TGGACGGAGAACTGATAAA........................................................	19	1	507.00	0.00	6.00	3.00	18.00	480.00
..........................................................................................TGGACGGAGAACTGATAATGG......................................................	21	1	483.00	7.00	157.00	24.00	290.00	5.00
..........................................................................................TGGACGGAGAACTGATAAGCG......................................................	21	1	464.00	17.00	68.00	10.00	367.00	2.00
..........................................................................................TGGACGGGGAACTGATAAGGG......................................................	21	1	437.00	8.00	70.00	36.00	311.00	12.00
..........................................................................................TGGACGGAGAACTGACAAGGGC.....................................................	22	1	433.00	86.00	53.00	80.00	116.00	98.00
..........................................................................................TGGACGGAGAACTGATGAGGGC.....................................................	22	1	432.00	86.00	74.00	27.00	109.00	136.00
..........................................................................................TGGACGGAGAACTGATAACGGC.....................................................	22	1	427.00	56.00	48.00	33.00	212.00	78.00
..........................................................................................TGGACGGAGAACTGATAAGGC......................................................	21	1	401.00	6.00	40.00	90.00	201.00	64.00
..........................................................................................TGGACGGAGAACTGATAAGAGC.....................................................	22	1	397.00	108.00	71.00	29.00	143.00	46.00
..........................................................................................TGGACAGAGAACTGATAAGGGC.....................................................	22	1	386.00	106.00	121.00	41.00	42.00	76.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAA...................................................	24	1	383.00	32.00	11.00	18.00	40.00	282.00
..........................................................................................TGGACGGAGAGCTGATAAGGG......................................................	21	1	380.00	10.00	59.00	37.00	254.00	20.00
..........................................................................................TGGACGGAGACCTGATAAGGG......................................................	21	1	370.00	10.00	27.00	36.00	296.00	1.00
..........................................................................................TGGATGGAGAACTGATAAGGGC.....................................................	22	1	363.00	94.00	44.00	41.00	93.00	91.00
..........................................................................................TGGACGGAGAACCGATAAGGGC.....................................................	22	1	362.00	90.00	42.00	60.00	93.00	77.00
..........................................................................................TGGACGGAGAACTGATAGGGG......................................................	21	1	358.00	12.00	46.00	16.00	255.00	29.00
..........................................................................................TGGACGGAGAACTGATACGG.......................................................	20	1	351.00	4.00	33.00	12.00	302.00	0.00
..........................................................................................TGGACGGCGAACTGATAAGGGC.....................................................	22	1	348.00	35.00	23.00	97.00	182.00	11.00
..........................................................................................TGGACGGAGAACTGGTAAGGG......................................................	21	1	346.00	18.00	54.00	32.00	233.00	9.00
..........................................................................................TGGCCGGAGAACTGATAAGGGC.....................................................	22	1	336.00	49.00	46.00	30.00	207.00	4.00
..........................................................................................TGGGCGGAGAACTGATAAGGG......................................................	21	1	326.00	11.00	68.00	20.00	205.00	22.00
..........................................................................................TGGACGGAGAAATGATAAGGGC.....................................................	22	1	318.00	98.00	22.00	30.00	56.00	112.00
..........................................................................................TGGAAGGAGAACTGATAAGGG......................................................	21	1	317.00	23.00	65.00	3.00	226.00	0.00
..........................................................................................TGGACGGAGCACTGATAAGG.......................................................	20	1	310.00	5.00	74.00	9.00	217.00	5.00
..........................................................................................TGGACGGAGAACTGAGAAGGGC.....................................................	22	1	309.00	51.00	39.00	6.00	195.00	18.00
..........................................................................................TGGACGGAGAACTGATAAGGGTTT...................................................	24	1	305.00	0.00	6.00	117.00	20.00	162.00
..........................................................................................AGGACGGAGAACTGATAAGGGC.....................................................	22	1	292.00	42.00	38.00	14.00	166.00	32.00
.........................................................................................CTGGACGGAGAACTGATAAGGG......................................................	22	1	288.00	16.00	62.00	61.00	140.00	9.00
..........................................................................................TGGACGGAGAACTGATAAAGG......................................................	21	1	278.00	18.00	130.00	17.00	83.00	30.00
..........................................................................................TGGACGGAGAACTGATAAGT.......................................................	20	1	273.00	0.00	17.00	35.00	86.00	135.00
..........................................................................................TAGACGGAGAACTGATAAGGG......................................................	21	1	273.00	15.00	174.00	18.00	62.00	4.00
..........................................................................................TGGACGGAGAACTGCTAAGG.......................................................	20	1	271.00	3.00	39.00	34.00	194.00	1.00
..........................................................................................TGGACGGAGAACTAATAAGGGC.....................................................	22	1	270.00	53.00	51.00	21.00	80.00	65.00
..........................................................................................TGTACGGAGAACTGATAAGGGC.....................................................	22	1	264.00	8.00	14.00	64.00	52.00	126.00
..........................................................................................TGGACGGCGAACTGATAAGGG......................................................	21	1	262.00	6.00	15.00	59.00	181.00	1.00
..........................................................................................TGGACGGAGAACTGATAAGA.......................................................	20	1	260.00	1.00	14.00	19.00	40.00	186.00
..........................................................................................TGGACGGAGAACTGATCAGG.......................................................	20	1	253.00	6.00	71.00	10.00	166.00	0.00
..........................................................................................TGGACGGAGAACTCATAAGGGC.....................................................	22	1	253.00	24.00	19.00	20.00	55.00	135.00
...........................................................................................GGACGGAGAACTGATAAGGGC.....................................................	21	1	249.00	40.00	15.00	23.00	46.00	125.00
..........................................................................................TGGACCGAGAACTGATAAGGGC.....................................................	22	1	241.00	22.00	15.00	28.00	22.00	154.00
..........................................................................................CGGACGGAGAACTGATAAGGG......................................................	21	1	240.00	10.00	41.00	30.00	144.00	15.00
..........................................................................................TCGACGGAGAACTGATAAGGGC.....................................................	22	1	239.00	16.00	14.00	49.00	58.00	102.00
..........................................................................................TGGACGGATAACTGATAAGGGC.....................................................	22	1	236.00	14.00	18.00	30.00	41.00	133.00
..........................................................................................TGGACGGAGAACTGATAACGG......................................................	21	1	232.00	7.00	30.00	12.00	178.00	5.00
...........................................................................................TGACGGAGAACTGATAAGGGC.....................................................	21	1	225.00	9.00	4.00	51.00	7.00	154.00
..........................................................................................TGGACTGAGAACTGATAAGGGC.....................................................	22	1	223.00	10.00	10.00	34.00	41.00	128.00
..........................................................................................TGGACGGAGAACTGATAAGAG......................................................	21	1	217.00	20.00	67.00	11.00	116.00	3.00
..........................................................................................TGGACGGAGAACTGATGAGGG......................................................	21	1	214.00	9.00	72.00	22.00	99.00	12.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTA...................................................	24	1	213.00	2.00	7.00	21.00	25.00	158.00
..........................................................................................TGAACGGAGAACTGATAAGGGC.....................................................	22	1	208.00	48.00	30.00	20.00	68.00	42.00

droEre2

CT--GGGCT--GACCCG---A----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCGTCAAG-CAATCC--------------------CCAGT	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
..........................................................................................TGGACGGAGAACTGATAAGGGC.....................................................	22	1	1004465.00	39992.00	70629.00	46295.00	847549.00
..........................................................................................TGGACGGAGAACTGATAAGGG......................................................	21	1	356614.00	3953.00	58606.00	3901.00	290154.00
..........................................................................................TGGACGGAGAACTGATAAGG.......................................................	20	1	70870.00	416.00	14515.00	395.00	55544.00
..........................................................................................TGGACGGAGAACTGATAATGGC.....................................................	22	1	17481.00	442.00	219.00	431.00	16389.00
..........................................................................................TGGACTGAGAACTGATAAGGGC.....................................................	22	1	14712.00	71.00	16.00	88.00	14537.00
..........................................................................................TGGACGGAGAACTGATAAGGGA.....................................................	22	1	13592.00	117.00	1737.00	207.00	11531.00
..........................................................................................TTGACGGAGAACTGATAAGGGC.....................................................	22	1	10200.00	99.00	26.00	94.00	9981.00
..........................................................................................TGGACGGAGAACTGATAAGTGC.....................................................	22	1	10071.00	522.00	293.00	569.00	8687.00
..........................................................................................TGGACGGAGAACTGATAAGGGCT....................................................	23	1	9140.00	205.00	1567.00	356.00	7012.00
..........................................................................................TGGACGGAGAACTGATAAGGGT.....................................................	22	1	8582.00	125.00	1326.00	120.00	7011.00
..........................................................................................TGGACGGAGAACTGATAAG........................................................	19	1	8492.00	25.00	2137.00	34.00	6296.00
..........................................................................................TGGACGTAGAACTGATAAGGGC.....................................................	22	1	7044.00	97.00	13.00	121.00	6813.00
..........................................................................................TGGACGGAGAACTGATAATGG......................................................	21	1	7009.00	46.00	184.00	35.00	6744.00
..........................................................................................TGGACGGAGAACTGATAAGGGCA....................................................	23	1	6824.00	109.00	889.00	249.00	5577.00
..........................................................................................TGGACGGATAACTGATAAGGGC.....................................................	22	1	6472.00	121.00	29.00	140.00	6182.00
..........................................................................................TGTACGGAGAACTGATAAGGGC.....................................................	22	1	6014.00	68.00	24.00	111.00	5811.00
..........................................................................................TGGACTGAGAACTGATAAGGG......................................................	21	1	4917.00	11.00	12.00	9.00	4885.00
..........................................................................................TGGACGGAGAACTTATAAGGGC.....................................................	22	1	4624.00	145.00	21.00	133.00	4325.00
..........................................................................................TGGACGGAGAACTGATAAGGTC.....................................................	22	1	4557.00	247.00	243.00	259.00	3808.00
..........................................................................................TTGACGGAGAACTGATAAGGG......................................................	21	1	3398.00	12.00	17.00	12.00	3357.00
..........................................................................................TGGACGGAGAACTGATAAGTG......................................................	21	1	2696.00	63.00	337.00	68.00	2228.00
..........................................................................................TGGACGTAGAACTGATAAGGG......................................................	21	1	2355.00	7.00	13.00	9.00	2326.00
..........................................................................................TGTACGGAGAACTGATAAGGG......................................................	21	1	2178.00	9.00	18.00	10.00	2141.00
..........................................................................................TGGACGGATAACTGATAAGGG......................................................	21	1	2146.00	11.00	27.00	13.00	2095.00
.........................................................................................CTGGACGGAGAACTGATAAGGGC.....................................................	23	1	2080.00	64.00	116.00	71.00	1829.00
..........................................................................................TGGAAGGAGAACTGATAAGGGC.....................................................	22	1	1921.00	59.00	124.00	36.00	1702.00
..........................................................................................TGGACGGAGAACTGATAAAGGC.....................................................	22	1	1882.00	321.00	249.00	316.00	996.00
..........................................................................................TGGACGGAGAAATGATAAGGGC.....................................................	22	1	1808.00	31.00	27.00	29.00	1721.00
..........................................................................................TGGACGGAGAACTGATAAGGT......................................................	21	1	1755.00	15.00	255.00	19.00	1466.00
..........................................................................................TGGATGGAGAACTGATAAGGGC.....................................................	22	1	1568.00	46.00	67.00	33.00	1422.00
..........................................................................................TGGACGGAGAACTTATAAGGG......................................................	21	1	1529.00	12.00	18.00	11.00	1488.00
..........................................................................................TGGGCGGAGAACTGATAAGGGC.....................................................	22	1	1491.00	71.00	101.00	84.00	1235.00
..........................................................................................TGAACGGAGAACTGATAAGGGC.....................................................	22	1	1413.00	36.00	54.00	32.00	1291.00
..........................................................................................CGGACGGAGAACTGATAAGGGC.....................................................	22	1	1362.00	68.00	74.00	83.00	1137.00
..........................................................................................TGGACGGAGAGCTGATAAGGGC.....................................................	22	1	1343.00	83.00	145.00	80.00	1035.00
..........................................................................................TGCACGGAGAACTGATAAGGGC.....................................................	22	1	1318.00	36.00	22.00	58.00	1202.00
..........................................................................................TGGACGGAGAACTGATAAGCGC.....................................................	22	1	1308.00	297.00	146.00	342.00	523.00
..........................................................................................TAGACGGAGAACTGATAAGGGC.....................................................	22	1	1229.00	63.00	387.00	113.00	666.00
..........................................................................................TGGACGGAGAACTGATAAGGCC.....................................................	22	1	1226.00	70.00	59.00	90.00	1007.00
..........................................................................................TGGACAGAGAACTGATAAGGGC.....................................................	22	1	1194.00	58.00	281.00	75.00	780.00
..........................................................................................TGGACGGGGAACTGATAAGGGC.....................................................	22	1	1185.00	68.00	143.00	97.00	877.00
..........................................................................................TGGACGGAGAACTGATAACGGC.....................................................	22	1	1181.00	204.00	102.00	182.00	693.00
..........................................................................................TGGACGGAGGACTGATAAGGGC.....................................................	22	1	1176.00	95.00	176.00	126.00	779.00
..........................................................................................TGGACGGAGCACTGATAAGGGC.....................................................	22	1	1115.00	176.00	240.00	223.00	476.00
..........................................................................................TGGACGGAGAACCGATAAGGGC.....................................................	22	1	1096.00	59.00	66.00	65.00	906.00
..........................................................................................TGGACGGAGAACTGATAAGGGCC....................................................	23	1	1035.00	56.00	94.00	37.00	848.00
..........................................................................................TGGACGGAGAACTGGTAAGGGC.....................................................	22	1	999.00	72.00	109.00	83.00	735.00
..........................................................................................TGGACGGAGAACTGACAAGGGC.....................................................	22	1	993.00	64.00	67.00	65.00	797.00
..........................................................................................TGGACGGAGAACTGCTAAGGGC.....................................................	22	1	975.00	120.00	227.00	128.00	500.00
..........................................................................................TGGACTGAGAACTGATAAGG.......................................................	20	1	959.00	1.00	4.00	1.00	953.00
..........................................................................................TGGACGGAGAACTGATAAGAGC.....................................................	22	1	953.00	157.00	179.00	166.00	451.00
..........................................................................................TGGACGGAGAACTGATACGGG......................................................	21	1	904.00	26.00	559.00	17.00	302.00
..........................................................................................TGGACGGAGAACTGATAAGGAC.....................................................	22	1	901.00	122.00	76.00	90.00	613.00
..........................................................................................TGGACGGAGAACTGATACGGGC.....................................................	22	1	872.00	74.00	254.00	115.00	429.00
..........................................................................................TGGACGGAGAACTGATAGGGGC.....................................................	22	1	832.00	37.00	109.00	60.00	626.00
..........................................................................................TGGACGGAGACCTGATAAGGGC.....................................................	22	1	802.00	51.00	137.00	61.00	553.00
..........................................................................................TGGCCGGAGAACTGATAAGGGC.....................................................	22	1	789.00	30.00	53.00	31.00	675.00
...........................................................................................TGACGGAGAACTGATAAGGGC.....................................................	21	1	763.00	3.00	11.00	6.00	743.00
..........................................................................................TCGACGGAGAACTGATAAGGGC.....................................................	22	1	757.00	44.00	19.00	50.00	644.00
..........................................................................................TGGACGGAGAACTGATGAGGGC.....................................................	22	1	745.00	36.00	77.00	77.00	555.00
..........................................................................................TGGACGGAGAACTGATAAGGC......................................................	21	1	725.00	7.00	70.00	5.00	643.00
..........................................................................................TTGACGGAGAACTGATAAGG.......................................................	20	1	720.00	1.00	3.00	1.00	715.00
.........................................................................................CTGGACGGAGAACTGATAAGGG......................................................	22	1	718.00	6.00	99.00	4.00	609.00
..........................................................................................TGGAAGGAGAACTGATAAGGG......................................................	21	1	702.00	4.00	93.00	3.00	602.00
..........................................................................................TGGACGGAGAACTAATAAGGGC.....................................................	22	1	683.00	58.00	70.00	69.00	486.00
..........................................................................................TGGACTGAGAACTGATAATGGC.....................................................	22	1	676.00	6.00	0.00	5.00	665.00
..........................................................................................TGGACGGAGAACTGATCAGGGC.....................................................	22	1	667.00	79.00	109.00	116.00	363.00
..........................................................................................TGGACGGAGAACTGCTAAGGG......................................................	21	1	615.00	15.00	316.00	17.00	267.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTT...................................................	24	1	611.00	14.00	71.00	38.00	488.00
..........................................................................................TGGACGGACAACTGATAAGGGC.....................................................	22	1	610.00	55.00	19.00	49.00	487.00
..........................................................................................TGGACGGAGAACTGATAATG.......................................................	20	1	605.00	6.00	49.00	2.00	548.00
..........................................................................................TGGACGGAGAAATGATAAGGG......................................................	21	1	586.00	4.00	30.00	4.00	548.00
..........................................................................................TGGACGGCGAACTGATAAGGGC.....................................................	22	1	581.00	37.00	62.00	51.00	431.00
..........................................................................................TAGACGGAGAACTGATAAGGG......................................................	21	1	574.00	2.00	336.00	5.00	231.00
..........................................................................................TGGACGGAGAACTGATAAGGA......................................................	21	1	570.00	8.00	116.00	8.00	438.00
..........................................................................................GGGACGGAGAACTGATAAGGGC.....................................................	22	1	568.00	75.00	27.00	107.00	359.00
..........................................................................................TGGACGGAGAACTCATAAGGGC.....................................................	22	1	563.00	65.00	29.00	57.00	412.00
..........................................................................................TGGACCGAGAACTGATAAGGGC.....................................................	22	1	550.00	44.00	12.00	24.00	470.00
..........................................................................................TGGATGGAGAACTGATAAGGG......................................................	21	1	542.00	5.00	59.00	3.00	475.00
..........................................................................................TGGACAGAGAACTGATAAGGG......................................................	21	1	521.00	4.00	241.00	6.00	270.00
..........................................................................................TGGACGGAGAACTGATAAAGG......................................................	21	1	520.00	30.00	251.00	26.00	213.00
..........................................................................................TGGGCGGAGAACTGATAAGGG......................................................	21	1	515.00	3.00	92.00	9.00	411.00
..........................................................................................TGGACGCAGAACTGATAAGGGC.....................................................	22	1	514.00	38.00	14.00	25.00	437.00
..........................................................................................TGGACGGAGAACTGATCAGGG......................................................	21	1	494.00	17.00	248.00	21.00	208.00
..........................................................................................TGTACGGAGAACTGATAAGG.......................................................	20	1	483.00	2.00	7.00	2.00	472.00
..........................................................................................TGGACGGAGGACTGATAAGGG......................................................	21	1	476.00	12.00	165.00	12.00	287.00
..........................................................................................TGGACGGAGAATTGATAAGGGC.....................................................	22	1	468.00	30.00	29.00	16.00	393.00
..........................................................................................TGCACGGAGAACTGATAAGGG......................................................	21	1	462.00	3.00	15.00	1.00	443.00
..........................................................................................TGAACGGAGAACTGATAAGGG......................................................	21	1	456.00	3.00	34.00	2.00	417.00
..........................................................................................TGGACGTAGAACTGATAAGG.......................................................	20	1	453.00	1.00	3.00	2.00	447.00
...........................................................................................GGACGGAGAACTGATAAGGGC.....................................................	21	1	446.00	13.00	47.00	13.00	373.00
..........................................................................................TGGACGGAGCACTGATAAGGG......................................................	21	1	442.00	14.00	218.00	31.00	179.00
..........................................................................................TGGACGGGGAACTGATAAGGG......................................................	21	1	441.00	9.00	105.00	8.00	319.00
..........................................................................................TGGACGAAGAACTGATAAGGGC.....................................................	22	1	440.00	19.00	37.00	30.00	354.00
..........................................................................................CGGACGGAGAACTGATAAGGG......................................................	21	1	431.00	7.00	59.00	6.00	359.00
..........................................................................................TGGACGGAAAACTGATAAGGGC.....................................................	22	1	430.00	29.00	13.00	20.00	368.00
..........................................................................................TGGACGGAGAGCTGATAAGGG......................................................	21	1	424.00	6.00	103.00	12.00	303.00
..........................................................................................TGGACGGAGAACTGATAAGGGG.....................................................	22	1	410.00	84.00	48.00	75.00	203.00
..........................................................................................TTGACTGAGAACTGATAAGGGC.....................................................	22	1	410.00	1.00	1.00	2.00	406.00
..........................................................................................TGGACGGATAACTGATAAGG.......................................................	20	1	408.00	1.00	10.00	1.00	396.00
..........................................................................................TGGACGGAGAACTGATAAGCG......................................................	21	1	404.00	34.00	135.00	23.00	212.00

droAna3

CCCAGTGCC--GG-----CGA----G-----TCCGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGG-TTGTCCA------------------TCCATC	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
..........................................................................................TGGACGGAGAACTGATAAGGGC.....................................................	22	1	552017.00	145216.00	347714.00	51524.00	7563.00
..........................................................................................TGGACGGAGAACTGATAAGGG......................................................	21	1	300446.00	78752.00	163660.00	56216.00	1818.00
..........................................................................................TGGACGGAGAACTGATAAGG.......................................................	20	1	134966.00	43491.00	62458.00	28326.00	691.00
..........................................................................................TGGACGGAGAACTGATAAGGGCT....................................................	23	1	27425.00	5417.00	19199.00	2691.00	118.00
..........................................................................................TGGACGGAGAACTGATAAG........................................................	19	1	24768.00	7028.00	9250.00	8419.00	71.00
..........................................................................................TGGACGGAGAACTGATAAGGGT.....................................................	22	1	23426.00	7618.00	12409.00	3361.00	38.00
..........................................................................................TGGACGGAGAACTGATAAGGGA.....................................................	22	1	11229.00	2490.00	6963.00	1651.00	125.00
..........................................................................................TGGACGGAGAACTGATAAGGGCA....................................................	23	1	9973.00	1309.00	7224.00	1052.00	388.00
..........................................................................................TGGACGGAGAACTGATAAGGT......................................................	21	1	7326.00	2785.00	3707.00	824.00	10.00
..........................................................................................TGTACGGAGAACTGATAAGGGC.....................................................	22	1	6838.00	669.00	6110.00	40.00	19.00
..........................................................................................TGGACGGAGAACTGATAAGGTC.....................................................	22	1	6535.00	1962.00	4354.00	175.00	44.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTT...................................................	24	1	6049.00	1765.00	3828.00	436.00	20.00
..........................................................................................TGGACGGAGAACTGATAAGGAC.....................................................	22	1	4123.00	1604.00	2423.00	76.00	20.00
..........................................................................................TGGACGGAGAACTGATAAGGGTT....................................................	23	1	3756.00	1115.00	2225.00	413.00	3.00
..........................................................................................TGTACGGAGAACTGATAAGGG......................................................	21	1	3198.00	356.00	2811.00	27.00	4.00
..........................................................................................TGGACGGAGAACTGATAAGGA......................................................	21	1	3059.00	1281.00	1521.00	249.00	8.00
..........................................................................................TGGACGTAGAACTGATAAGGGC.....................................................	22	1	3039.00	495.00	2494.00	35.00	15.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTT..................................................	25	1	2868.00	889.00	1816.00	162.00	1.00
..........................................................................................TGGACGGAGAACTGATAATGGC.....................................................	22	1	2737.00	410.00	2092.00	138.00	97.00
..........................................................................................TGGACTGAGAACTGATAAGGGC.....................................................	22	1	2307.00	295.00	1962.00	31.00	19.00
..........................................................................................TTGACGGAGAACTGATAAGGGC.....................................................	22	1	2282.00	519.00	1713.00	36.00	14.00
..........................................................................................TGGACGGAGAACTGATAAGGCC.....................................................	22	1	2227.00	873.00	1100.00	233.00	21.00
..........................................................................................TGGACGGAGAACTGATAAGGGTTT...................................................	24	1	2168.00	632.00	1343.00	193.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGTGC.....................................................	22	1	2049.00	298.00	1349.00	290.00	112.00
..........................................................................................TGGACGGAGAACTGATAAGT.......................................................	20	1	1752.00	609.00	915.00	225.00	3.00
..........................................................................................TGGACGGATAACTGATAAGGGC.....................................................	22	1	1625.00	269.00	1295.00	35.00	26.00
..........................................................................................TGGACGGAGAACTGATAATGG......................................................	21	1	1551.00	222.00	1152.00	146.00	31.00
..........................................................................................TGGACGTAGAACTGATAAGGG......................................................	21	1	1498.00	294.00	1155.00	44.00	5.00
..........................................................................................TGGACGGAGAACTGATAAGGC......................................................	21	1	1444.00	489.00	698.00	252.00	5.00
..........................................................................................TGTACGGAGAACTGATAAGG.......................................................	20	1	1360.00	211.00	1130.00	19.00	0.00
..........................................................................................TGGACTGAGAACTGATAAGGG......................................................	21	1	1232.00	188.00	996.00	45.00	3.00
..........................................................................................TTGACGGAGAACTGATAAGGG......................................................	21	1	1143.00	279.00	819.00	39.00	6.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAT...................................................	24	1	1128.00	196.00	835.00	81.00	16.00
..........................................................................................TGGACGGAGAACTGATAAGTG......................................................	21	1	1094.00	165.00	560.00	335.00	34.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTTT.................................................	26	1	1068.00	386.00	643.00	39.00	0.00
..........................................................................................TGGACGGAGAGCTGATAAGGGC.....................................................	22	1	1027.00	441.00	460.00	109.00	17.00
..........................................................................................TGGACGGAGAACTTATAAGGGC.....................................................	22	1	1020.00	241.00	710.00	44.00	25.00
..........................................................................................TGGACGGAGAAATGATAAGGGC.....................................................	22	1	971.00	617.00	277.00	68.00	9.00
..........................................................................................TAGACGGAGAACTGATAAGGGC.....................................................	22	1	896.00	388.00	396.00	100.00	12.00
..........................................................................................TGGACGGAGAACCGATAAGGGC.....................................................	22	1	874.00	436.00	368.00	66.00	4.00
..........................................................................................TGGGCGGAGAACTGATAAGGGC.....................................................	22	1	818.00	128.00	499.00	173.00	18.00
..........................................................................................TGGACGGATAACTGATAAGGG......................................................	21	1	782.00	162.00	577.00	37.00	6.00
..........................................................................................TGGACGGAGGACTGATAAGGGC.....................................................	22	1	746.00	106.00	399.00	222.00	19.00
..........................................................................................TGGACGGAGAACAGATAAGGGC.....................................................	22	1	743.00	678.00	44.00	16.00	5.00
..........................................................................................TGGACGGGGAACTGATAAGGGC.....................................................	22	1	743.00	146.00	420.00	163.00	14.00
..........................................................................................TGGAAGGAGAACTGATAAGGGC.....................................................	22	1	734.00	71.00	318.00	335.00	10.00
..........................................................................................TGGATGGAGAACTGATAAGGGC.....................................................	22	1	717.00	148.00	478.00	82.00	9.00
..........................................................................................TGGACGGAGAACTGACAAGGGC.....................................................	22	1	713.00	364.00	230.00	106.00	13.00
..........................................................................................CGGACGGAGAACTGATAAGGGC.....................................................	22	1	701.00	116.00	422.00	149.00	14.00
..........................................................................................TGGACGTAGAACTGATAAGG.......................................................	20	1	672.00	171.00	478.00	21.00	2.00
..........................................................................................TGGACGGAGAACTGATAAGCGC.....................................................	22	1	657.00	81.00	138.00	375.00	63.00
..........................................................................................TGGACGGAGAAGTGATAAGGGC.....................................................	22	1	649.00	575.00	25.00	43.00	6.00
..........................................................................................TGGACGGAGAACTGATAAAGGC.....................................................	22	1	638.00	121.00	345.00	91.00	81.00
..........................................................................................TGGACGGAGAACTGGTAAGGGC.....................................................	22	1	609.00	101.00	379.00	113.00	16.00
..........................................................................................TGGACGGAGAACTGATAACGGC.....................................................	22	1	607.00	84.00	180.00	282.00	61.00
..........................................................................................TGGACGGAGAACTGATAAGCG......................................................	21	1	592.00	67.00	65.00	440.00	20.00
..........................................................................................TGGACGGAGAGCTGATAAGGG......................................................	21	1	565.00	196.00	219.00	145.00	5.00
..........................................................................................TGGACGGAGGACTGATAAGGG......................................................	21	1	563.00	80.00	196.00	282.00	5.00
..........................................................................................TGGACGGAGAACTGATTT.........................................................	18	1	557.00	10.00	340.00	207.00	0.00
..........................................................................................TGGACGGAGAAATGATAAGGG......................................................	21	1	548.00	330.00	139.00	76.00	3.00
..........................................................................................TGGACAGAGAACTGATAAGGGC.....................................................	22	1	543.00	92.00	341.00	97.00	13.00
..........................................................................................TGGACGGAGAACTGATAA.........................................................	18	1	535.00	20.00	227.00	288.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGGGAA....................................................	23	1	535.00	81.00	347.00	74.00	33.00
..........................................................................................TGGACGGAGAATTGATAAGGGC.....................................................	22	1	531.00	344.00	147.00	38.00	2.00
..........................................................................................TCGACGGAGAACTGATAAGGGC.....................................................	22	1	523.00	243.00	218.00	50.00	12.00
..........................................................................................TTGACGGAGAACTGATAAGG.......................................................	20	1	513.00	159.00	334.00	18.00	2.00
...........................................................................................TGACGGAGAACTGATAAGGGC.....................................................	21	1	489.00	106.00	373.00	8.00	2.00
..........................................................................................TGGACGGAGAACTGATAAGGGAT....................................................	23	1	489.00	116.00	334.00	36.00	3.00
..........................................................................................TGGACTGAGAACTGATAAGG.......................................................	20	1	488.00	104.00	362.00	20.00	2.00
..........................................................................................TGGACGGGGAACTGATAAGGG......................................................	21	1	486.00	58.00	198.00	228.00	2.00
..........................................................................................TGGAAGGAGAACTGATAAGGG......................................................	21	1	484.00	40.00	129.00	311.00	4.00
..........................................................................................TAGACGGAGAACTGATAAGGG......................................................	21	1	475.00	196.00	167.00	111.00	1.00
..........................................................................................TGGACGGAGAACTGAGAAGGGC.....................................................	22	1	468.00	264.00	9.00	180.00	15.00
..........................................................................................TGGACGGAGAACTGATAAGAGC.....................................................	22	1	467.00	90.00	246.00	102.00	29.00
..........................................................................................TGGACGAAGAACTGATAAGGGC.....................................................	22	1	466.00	173.00	250.00	41.00	2.00
..........................................................................................TGCACGGAGAACTGATAAGGGC.....................................................	22	1	460.00	137.00	246.00	62.00	15.00
..........................................................................................TGGACGGAGAACTGATAATG.......................................................	20	1	458.00	67.00	305.00	73.00	13.00
..........................................................................................TGGACGGAGAACTTATAAGGG......................................................	21	1	446.00	118.00	290.00	30.00	8.00
..........................................................................................TGGACGGAGAACTGATAGGGGC.....................................................	22	1	436.00	91.00	258.00	82.00	5.00
..........................................................................................TGGACGGAGAACTGATGAGGGC.....................................................	22	1	431.00	89.00	281.00	54.00	7.00
..........................................................................................TGGACGGAGAACTGGTAAGGG......................................................	21	1	430.00	70.00	184.00	174.00	2.00
..........................................................................................TGGACGGATAACTGATAAGG.......................................................	20	1	427.00	116.00	293.00	17.00	1.00
..........................................................................................TGGACGGAGAACCGATAAGGG......................................................	21	1	427.00	223.00	148.00	53.00	3.00
..........................................................................................TGGACGGAGAACTGATAGGGG......................................................	21	1	424.00	57.00	152.00	212.00	3.00
..........................................................................................GGGACGGAGAACTGATAAGGGC.....................................................	22	1	421.00	85.00	79.00	246.00	11.00
..........................................................................................TGGACGGAGAACAGATAAGGG......................................................	21	1	418.00	395.00	7.00	15.00	1.00
..........................................................................................TGGACGGAGACCTGATAAGGGC.....................................................	22	1	406.00	224.00	87.00	83.00	12.00
..........................................................................................TGGACGGAGAACTGATAACGG......................................................	21	1	405.00	42.00	65.00	286.00	12.00
..........................................................................................TGGACGGAGAACTGACAAGGG......................................................	21	1	403.00	181.00	120.00	101.00	1.00
..........................................................................................AGGACGGAGAACTGATAAGGGC.....................................................	22	1	401.00	91.00	71.00	235.00	4.00
..........................................................................................TGGGCGGAGAACTGATAAGGG......................................................	21	1	397.00	55.00	207.00	131.00	4.00
..........................................................................................TGGATGGAGAACTGATAAGGG......................................................	21	1	395.00	61.00	240.00	93.00	1.00
..........................................................................................TGGACGGAGCACTGATAAGGG......................................................	21	1	394.00	33.00	63.00	282.00	16.00
..........................................................................................TGGACGGAGAACTGATACGGG......................................................	21	1	391.00	45.00	70.00	263.00	13.00
..........................................................................................CGGACGGAGAACTGATAAGGG......................................................	21	1	387.00	60.00	186.00	138.00	3.00
..........................................................................................TGGACGGAGAACTAATAAGGGC.....................................................	22	1	377.00	169.00	139.00	63.00	6.00
..........................................................................................TGGACGGAGCACTGATAAGGGC.....................................................	22	1	374.00	37.00	86.00	206.00	45.00
..........................................................................................TGTACGGAGAACTGATAAGGGCT....................................................	23	1	373.00	25.00	346.00	2.00	0.00
..........................................................................................TGGACGGAGAACTCATAAGGGC.....................................................	22	1	367.00	202.00	86.00	60.00	19.00
..........................................................................................TGGACGGAGAAGTGATAAGGG......................................................	21	1	360.00	312.00	10.00	38.00	0.00
..........................................................................................TGAACGGAGAACTGATAAGGGC.....................................................	22	1	359.00	72.00	212.00	69.00	6.00

dp4

CG--GGGTC--GGCCCGGGGACTCCG----GGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAC-TAATCCTGCGGGGAGGAAAGTCAAGTCCCTT	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
..........................................................................................TGGACGGAGAACTGATAAGGGC.....................................................	22	1	228154.00	82274.00	64213.00	78944.00	2723.00
..........................................................................................TGGACGGAGAACTGATAAGGG......................................................	21	1	141162.00	53262.00	7040.00	80553.00	307.00
..........................................................................................TGGACGGAGAACTGATAAGG.......................................................	20	1	45052.00	25049.00	959.00	18861.00	183.00
..........................................................................................TGGACGGAGAACTGATAAGGGT.....................................................	22	1	10491.00	5619.00	259.00	4563.00	50.00
..........................................................................................TGGACGGAGAACTGATAAG........................................................	19	1	7270.00	2761.00	41.00	4319.00	149.00
..........................................................................................TGGACGGAGAACTGATAAGGGCT....................................................	23	1	4153.00	1932.00	332.00	1813.00	76.00
..........................................................................................TGGACGGAGAACTGATAAGGGA.....................................................	22	1	3742.00	971.00	231.00	2513.00	27.00
..........................................................................................TGGACGGAGAACTGATAAGGT......................................................	21	1	2425.00	1666.00	9.00	736.00	14.00
..........................................................................................TGGACGGAGAACTGATAAGGGCA....................................................	23	1	1947.00	1137.00	105.00	660.00	45.00
..........................................................................................TGGACGGAGAACTGATAAGGGTT....................................................	23	1	1004.00	647.00	1.00	339.00	17.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTT...................................................	24	1	860.00	721.00	20.00	98.00	21.00
..........................................................................................TGGAAGGAGAACTGATAAGGGC.....................................................	22	1	851.00	25.00	509.00	317.00	0.00
..........................................................................................TGGACGGAGCACTGATAAGGGC.....................................................	22	1	580.00	35.00	430.00	115.00	0.00
..........................................................................................TGGACGGAGAACTGATAGGGGC.....................................................	22	1	483.00	102.00	60.00	313.00	8.00
..........................................................................................TGGACGGAGAACTGATAAGGGCC....................................................	23	1	482.00	288.00	76.00	112.00	6.00
..........................................................................................TGGACGGAGGACTGATAAGGGC.....................................................	22	1	414.00	67.00	226.00	121.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGCGC.....................................................	22	1	406.00	39.00	134.00	230.00	3.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTT..................................................	25	1	399.00	353.00	8.00	12.00	26.00
..........................................................................................TGGACGGAGAACTGATAAGGGTTT...................................................	24	1	392.00	344.00	1.00	39.00	8.00
..........................................................................................TGGACGGAGAACTGCTAAGGGC.....................................................	22	1	392.00	44.00	192.00	156.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGGCC.....................................................	22	1	379.00	255.00	29.00	94.00	1.00
..........................................................................................TGGACGGAGAACTGATAGGGG......................................................	21	1	367.00	80.00	9.00	278.00	0.00
..........................................................................................TGGACGGAGTACTGATAAGGGC.....................................................	22	1	365.00	14.00	238.00	111.00	2.00
..........................................................................................TGGACGGAGAACTGATAAAGGC.....................................................	22	1	358.00	82.00	125.00	150.00	1.00
.........................................................................................CTGGACGGAGAACTGATAAGGGC.....................................................	23	1	355.00	123.00	118.00	114.00	0.00
..........................................................................................TAGACGGAGAACTGATAAGGGC.....................................................	22	1	342.00	46.00	123.00	172.00	1.00
..........................................................................................TGGACGGAGAGCTGATAAGGGC.....................................................	22	1	341.00	77.00	141.00	122.00	1.00
..........................................................................................TGGACGGGGAACTGATAAGGGC.....................................................	22	1	337.00	100.00	110.00	125.00	2.00
..........................................................................................TGAACGGAGAACTGATAAGGGC.....................................................	22	1	330.00	25.00	35.00	270.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGGA......................................................	21	1	329.00	165.00	2.00	153.00	9.00
..........................................................................................TGGACGGAGAACTGATAAGTGC.....................................................	22	1	318.00	22.00	117.00	176.00	3.00
..........................................................................................TGGGCGGAGAACTGATAAGGGC.....................................................	22	1	307.00	72.00	103.00	128.00	4.00
..........................................................................................TGAACGGAGAACTGATAAGGG......................................................	21	1	302.00	11.00	5.00	286.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGT.......................................................	20	1	299.00	197.00	2.00	74.00	26.00
..........................................................................................TGGACGGAGAACTGGTAAGGGC.....................................................	22	1	298.00	68.00	133.00	96.00	1.00
..........................................................................................TGGACGGAGAACTGCTAAGGG......................................................	21	1	297.00	46.00	24.00	227.00	0.00
..........................................................................................TGGAAGGAGAACTGATAAGGG......................................................	21	1	296.00	13.00	53.00	230.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGCG......................................................	21	1	286.00	31.00	21.00	234.00	0.00
..........................................................................................TGGACAGAGAACTGATAAGGGC.....................................................	22	1	284.00	47.00	108.00	129.00	0.00
..........................................................................................TGGACGGAGAACTGATAACGGC.....................................................	22	1	278.00	48.00	88.00	142.00	0.00
..........................................................................................TGGACGGAGCACTGATAAGGG......................................................	21	1	274.00	31.00	53.00	190.00	0.00
..........................................................................................TGCACGGAGAACTGATAAGGGC.....................................................	22	1	274.00	50.00	14.00	210.00	0.00
..........................................................................................CGGACGGAGAACTGATAAGGGC.....................................................	22	1	267.00	76.00	85.00	103.00	3.00
..........................................................................................TGGACGGAGAACTGATACGGG......................................................	21	1	264.00	40.00	33.00	191.00	0.00
..........................................................................................TGGATGGAGAACTGATAAGGGC.....................................................	22	1	261.00	64.00	106.00	91.00	0.00
..........................................................................................TGCACGGAGAACTGATAAGGG......................................................	21	1	254.00	25.00	4.00	225.00	0.00
..........................................................................................TGGACGGAGAACTGATCAGGG......................................................	21	1	246.00	33.00	31.00	182.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGAGC.....................................................	22	1	246.00	30.00	83.00	133.00	0.00
..........................................................................................TGGACGGAGGACTGATAAGGG......................................................	21	1	243.00	49.00	32.00	162.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGTG......................................................	21	1	242.00	10.00	20.00	212.00	0.00
..........................................................................................TGGACGGAGAACTGATACGGGC.....................................................	22	1	240.00	33.00	98.00	109.00	0.00
..........................................................................................TGGACGGAGAACTGACAAGGGC.....................................................	22	1	237.00	53.00	79.00	104.00	1.00
.........................................................................................CTGGACGGAGAACTGATAAGGG......................................................	22	1	232.00	84.00	13.00	135.00	0.00
..........................................................................................TGGACGGAGAACCGATAAGGGC.....................................................	22	1	229.00	94.00	69.00	64.00	2.00
..........................................................................................TGGACGGAGAACTGATAAGGGG.....................................................	22	1	226.00	15.00	150.00	60.00	1.00
..........................................................................................TGGACGGGGAACTGATAAGGG......................................................	21	1	223.00	58.00	15.00	150.00	0.00
..........................................................................................TGGACGGAGAACTGATAA.........................................................	18	1	222.00	4.00	6.00	115.00	97.00
..........................................................................................TGGACGGAGAAATGATAAGGGC.....................................................	22	1	221.00	42.00	124.00	54.00	1.00
..........................................................................................TGGACGGAGAACTGATAATGGC.....................................................	22	1	218.00	32.00	101.00	83.00	2.00
..........................................................................................TGGACGGAGAACTGGTAAGGG......................................................	21	1	217.00	47.00	16.00	154.00	0.00
..........................................................................................TGGACGGAGTACTGATAAGGG......................................................	21	1	214.00	6.00	39.00	169.00	0.00
..........................................................................................TGGACGGAGAACTGATGAGGGC.....................................................	22	1	211.00	46.00	70.00	95.00	0.00
..........................................................................................TGGACGGAGAACTGATCAGGGC.....................................................	22	1	211.00	30.00	103.00	77.00	1.00
..........................................................................................TGGACGGAGAACTGATAAGGC......................................................	21	1	210.00	76.00	9.00	124.00	1.00
..........................................................................................TGTACGGAGAACTGATAAGGGC.....................................................	22	1	208.00	78.00	15.00	112.00	3.00
..........................................................................................TGGACGGAGAGCTGATAAGGG......................................................	21	1	200.00	50.00	19.00	131.00	0.00
..........................................................................................TGGACGGAGAACTGATAAAGG......................................................	21	1	195.00	25.00	16.00	153.00	1.00
..........................................................................................TAGACGGAGAACTGATAAGGG......................................................	21	1	194.00	25.00	10.00	159.00	0.00
..........................................................................................GGGACGGAGAACTGATAAGGGC.....................................................	22	1	178.00	13.00	88.00	77.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTTT.................................................	26	1	177.00	164.00	1.00	3.00	9.00
..........................................................................................TGGACGGAGAACTGATAAGGAC.....................................................	22	1	172.00	34.00	43.00	72.00	23.00
..........................................................................................TGGACAGAGAACTGATAAGGG......................................................	21	1	171.00	23.00	6.00	142.00	0.00
..........................................................................................TGGACGGAGACCTGATAAGGGC.....................................................	22	1	168.00	45.00	70.00	52.00	1.00
..........................................................................................AGGACGGAGAACTGATAAGGGC.....................................................	22	1	167.00	26.00	62.00	77.00	2.00
..........................................................................................TGGACGGAGAACTGAGAAGGGC.....................................................	22	1	164.00	3.00	91.00	70.00	0.00
..........................................................................................TGGGCGGAGAACTGATAAGGG......................................................	21	1	162.00	44.00	12.00	106.00	0.00
...................................................CCTTATCATTCTCGCGCCCCGT............................................................................................	22	1	162.00	74.00	65.00	23.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGGTC.....................................................	22	1	161.00	39.00	38.00	83.00	1.00
..........................................................................................TGGACGGAGAACTAATAAGGGC.....................................................	22	1	160.00	34.00	53.00	73.00	0.00
..........................................................................................CGGACGGAGAACTGATAAGGG......................................................	21	1	160.00	51.00	8.00	101.00	0.00
..........................................................................................TGGACGGAGAACTGATAACGG......................................................	21	1	157.00	31.00	9.00	117.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGAG......................................................	21	1	154.00	22.00	9.00	123.00	0.00
..........................................................................................TGGATGGAGAACTGATAAGGG......................................................	21	1	150.00	48.00	13.00	89.00	0.00
..........................................................................................TGTACGGAGAACTGATAAGGG......................................................	21	1	141.00	42.00	0.00	99.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAT...................................................	24	1	139.00	104.00	2.00	28.00	5.00
..........................................................................................TGGACGGAGAACTGATAATGG......................................................	21	1	138.00	19.00	11.00	108.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGGGCCT...................................................	24	1	137.00	101.00	7.00	27.00	2.00
..........................................................................................TGGCCGGAGAACTGATAAGGGC.....................................................	22	1	135.00	28.00	44.00	63.00	0.00
..........................................................................................TGGACGGAGAACTGATGAGGG......................................................	21	1	130.00	33.00	5.00	92.00	0.00
..........................................................................................TGGACGGAGAACTGATATGGG......................................................	21	1	130.00	11.00	4.00	115.00	0.00
..........................................................................................TGGACGGAGAACTGACAAGGG......................................................	21	1	127.00	35.00	5.00	87.00	0.00
..........................................................................................TGGACGGAGAACTCATAAGGGC.....................................................	22	1	123.00	18.00	34.00	71.00	0.00
..........................................................................................TGGACGGAGAATTGATAAGGGC.....................................................	22	1	117.00	41.00	48.00	28.00	0.00
...........................................................................................GGACGGAGAACTGATAAGGGC.....................................................	21	1	117.00	43.00	27.00	46.00	1.00
..........................................................................................TGGACGGCGAACTGATAAGGGC.....................................................	22	1	115.00	25.00	50.00	40.00	0.00
..........................................................................................TGGACGGAGAACCGATAAGGG......................................................	21	1	112.00	44.00	5.00	62.00	1.00
..........................................................................................GGGACGGAGAACTGATAAGGG......................................................	21	1	110.00	8.00	11.00	91.00	0.00
.........................................................................................CTGGACGGAGAACTGATAAGG.......................................................	21	1	108.00	54.00	3.00	51.00	0.00
..........................................................................................TGGACGGAGACCTGATAAGGG......................................................	21	1	108.00	30.00	5.00	73.00	0.00
..........................................................................................TGGACGGTGAACTGATAAGGGC.....................................................	22	1	106.00	13.00	61.00	32.00	0.00
..........................................................................................TCGACGGAGAACTGATAAGGGC.....................................................	22	1	103.00	38.00	21.00	43.00	1.00

droPer1

CG--GGGTC--GGCCCGGGGACTCCG----GGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAC-TAATCCTGCGGGGAGGAAAGTCAAGTCCCTT	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
..........................................................................................TGGACGGAGAACTGATAAGGGC.....................................................	22	1	386110.00	144815.00	13636.00	94995.00	104180.00	28484.00
..........................................................................................TGGACGGAGAACTGATAAGGG......................................................	21	1	303922.00	76007.00	1975.00	95125.00	129735.00	1080.00
..........................................................................................TGGACGGAGAACTGATAAGG.......................................................	20	1	120100.00	52692.00	452.00	20724.00	45963.00	269.00
..........................................................................................TGGACGGAGAACTGATAAGGGT.....................................................	22	1	19442.00	8124.00	75.00	4048.00	7167.00	28.00
..........................................................................................TGGACGGAGAACTGATAAG........................................................	19	1	15784.00	3781.00	20.00	3498.00	8250.00	235.00
..........................................................................................TGGACGGAGAACTGATAAGGGCT....................................................	23	1	9279.00	3605.00	106.00	2033.00	3253.00	282.00
..........................................................................................TGGACGGAGAACTGATAAGGGA.....................................................	22	1	8916.00	2479.00	47.00	2667.00	3677.00	46.00
..........................................................................................TGGACGGAGAACTGATAAGGGCA....................................................	23	1	5455.00	1900.00	43.00	869.00	2287.00	356.00
..........................................................................................TGGACGGAGAACTGATAAGGT......................................................	21	1	4715.00	2707.00	4.00	544.00	1459.00	1.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTT...................................................	24	1	1712.00	1190.00	9.00	81.00	328.00	104.00
..........................................................................................TGGACGGAGAACTGATAAGGGTT....................................................	23	1	1464.00	803.00	2.00	222.00	432.00	5.00
..........................................................................................TGGACGGAGAACTGATAGGGG......................................................	21	1	1360.00	197.00	1.00	346.00	813.00	3.00
..........................................................................................TGGACGGAGAACTGATAAGCG......................................................	21	1	1342.00	32.00	4.00	353.00	953.00	0.00
..........................................................................................TGGACGGAGAACTGATAGGGGC.....................................................	22	1	1290.00	291.00	10.00	462.00	498.00	29.00
..........................................................................................TGGAAGGAGAACTGATAAGGGC.....................................................	22	1	1208.00	18.00	46.00	258.00	885.00	1.00
..........................................................................................TGGAAGGAGAACTGATAAGGG......................................................	21	1	1096.00	5.00	4.00	201.00	886.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGCGC.....................................................	22	1	1072.00	39.00	17.00	321.00	668.00	27.00
..........................................................................................TGGACGGAGAACTGATAAGGA......................................................	21	1	983.00	510.00	1.00	187.00	280.00	5.00
..........................................................................................TGGACGGAGGACTGATAAGGG......................................................	21	1	922.00	60.00	6.00	133.00	722.00	1.00
..........................................................................................TGGACGGAGAACTGATAAGTG......................................................	21	1	856.00	33.00	4.00	169.00	649.00	1.00
..........................................................................................TGGACGGAGAACTGATACGGG......................................................	21	1	850.00	22.00	5.00	277.00	546.00	0.00
..........................................................................................TGGACGGAGAACTGCTAAGGG......................................................	21	1	827.00	10.00	17.00	283.00	517.00	0.00
..........................................................................................TGGACGGAGCACTGATAAGGG......................................................	21	1	814.00	19.00	6.00	194.00	595.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGGC......................................................	21	1	788.00	110.00	2.00	141.00	535.00	0.00
..........................................................................................TGGACAGAGAACTGATAAGGGC.....................................................	22	1	782.00	79.00	15.00	595.00	85.00	8.00
..........................................................................................TGGACGGAGAACTGATAAGGAC.....................................................	22	1	775.00	156.00	13.00	115.00	118.00	373.00
..........................................................................................TGGACGGAGAACTGATAAGGTC.....................................................	22	1	765.00	152.00	11.00	107.00	478.00	17.00
..........................................................................................TGGACGGAGGACTGATAAGGGC.....................................................	22	1	760.00	122.00	30.00	139.00	453.00	16.00
..........................................................................................TGGACGGAGAACTGATAAGTGC.....................................................	22	1	750.00	88.00	16.00	152.00	460.00	34.00
..........................................................................................TGGACAGAGAACTGATAAGGG......................................................	21	1	738.00	39.00	3.00	596.00	100.00	0.00
..........................................................................................TGGACGGGGAACTGATAAGGG......................................................	21	1	716.00	79.00	6.00	143.00	485.00	3.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTT..................................................	25	1	705.00	575.00	4.00	9.00	67.00	50.00
..........................................................................................TGGACGGAGAACTGATAACGG......................................................	21	1	662.00	8.00	0.00	159.00	493.00	2.00
..........................................................................................TGGACGGGGAACTGATAAGGGC.....................................................	22	1	658.00	148.00	17.00	142.00	320.00	31.00
..........................................................................................TGGACGGAGAGCTGATAAGGGC.....................................................	22	1	656.00	168.00	25.00	144.00	295.00	24.00
..........................................................................................TGGACGGAGAACTGATAAGGCC.....................................................	22	1	643.00	138.00	8.00	101.00	382.00	14.00
..........................................................................................TGGACGGAGAACTGATAA.........................................................	18	1	643.00	7.00	4.00	86.00	294.00	252.00
..........................................................................................TGGGCGGAGAACTGATAAGGGC.....................................................	22	1	630.00	82.00	12.00	133.00	351.00	52.00
..........................................................................................TGGACGGAGAACTGATAACGGC.....................................................	22	1	622.00	29.00	13.00	160.00	412.00	8.00
..........................................................................................TGGACGGAGAACTGATAAGGGCC....................................................	23	1	617.00	212.00	15.00	104.00	200.00	86.00
..........................................................................................TGGACGGAGAACTGGTAAGGG......................................................	21	1	616.00	64.00	9.00	129.00	413.00	1.00
..........................................................................................TGGACGGAGAGCTGATAAGGG......................................................	21	1	587.00	97.00	8.00	131.00	349.00	2.00
..........................................................................................TGGACGGAGTACTGATAAGGG......................................................	21	1	583.00	10.00	12.00	96.00	464.00	1.00
..........................................................................................TGGACGGAGAACTGATAATGGC.....................................................	22	1	567.00	160.00	11.00	98.00	285.00	13.00
..........................................................................................CGGACGGAGAACTGATAAGGGC.....................................................	22	1	553.00	138.00	18.00	97.00	277.00	23.00
..........................................................................................TGGACGGAGCACTGATAAGGGC.....................................................	22	1	552.00	18.00	48.00	125.00	358.00	3.00
..........................................................................................TGGACGGAGAACTGATCAGGG......................................................	21	1	540.00	12.00	17.00	184.00	327.00	0.00
..........................................................................................TGGGCGGAGAACTGATAAGGG......................................................	21	1	522.00	37.00	2.00	100.00	382.00	1.00
..........................................................................................TGGACGGAGAACTGATAAAGGC.....................................................	22	1	522.00	140.00	36.00	251.00	92.00	3.00
..........................................................................................TGGACGGAGAACTGATAAGAG......................................................	21	1	520.00	32.00	2.00	320.00	166.00	0.00
..........................................................................................TGGACGGAGAACTGGTAAGGGC.....................................................	22	1	513.00	128.00	18.00	117.00	236.00	14.00
..........................................................................................CGGACGGAGAACTGATAAGGG......................................................	21	1	511.00	58.00	6.00	128.00	318.00	1.00
..........................................................................................TGGACGGAGAACTGATAATGG......................................................	21	1	501.00	77.00	0.00	107.00	317.00	0.00
..........................................................................................TAGACGGAGAACTGATAAGGGC.....................................................	22	1	489.00	92.00	23.00	191.00	164.00	19.00
..........................................................................................AGGACGGAGAACTGATAAGGGC.....................................................	22	1	485.00	54.00	9.00	97.00	310.00	15.00
..........................................................................................AGGACGGAGAACTGATAAGGG......................................................	21	1	479.00	29.00	2.00	89.00	356.00	3.00
..........................................................................................TGGACGGAGAACTGATAAGAGC.....................................................	22	1	476.00	60.00	19.00	261.00	132.00	4.00
..........................................................................................TGTACGGAGAACTGATAAGGGC.....................................................	22	1	460.00	332.00	3.00	43.00	65.00	17.00
..........................................................................................TGGACGGAGAACTGATATGGG......................................................	21	1	454.00	19.00	0.00	67.00	368.00	0.00
..........................................................................................TGGACGGAGAACTGCTAAGGGC.....................................................	22	1	452.00	10.00	51.00	150.00	237.00	4.00
.........................................................................................CTGGACGGAGAACTGATAAGGGC.....................................................	23	1	451.00	23.00	17.00	163.00	243.00	5.00
..........................................................................................TTGACGGAGAACTGATAAGGGC.....................................................	22	1	445.00	248.00	3.00	30.00	72.00	92.00
.........................................................................................CTGGACGGAGAACTGATAAGGG......................................................	22	1	429.00	10.00	6.00	149.00	264.00	0.00
..........................................................................................TGGACGGAGAACTGATAAAGG......................................................	21	1	428.00	34.00	6.00	255.00	133.00	0.00
..........................................................................................TAGACGGAGAACTGATAAGGG......................................................	21	1	427.00	41.00	5.00	195.00	185.00	1.00
..........................................................................................TGGATGGAGAACTGATAAGGGC.....................................................	22	1	425.00	139.00	17.00	111.00	135.00	23.00
..........................................................................................TGGACGGAGAACTGATAAGT.......................................................	20	1	425.00	255.00	1.00	30.00	139.00	0.00
..........................................................................................TGGACGGAGAACTGACAAGGGC.....................................................	22	1	420.00	71.00	14.00	109.00	219.00	7.00
..........................................................................................TGGACGGAGTACTGATAAGGGC.....................................................	22	1	399.00	13.00	47.00	62.00	275.00	2.00
..........................................................................................TGGACGGAGAACTGATGAGGG......................................................	21	1	388.00	33.00	1.00	147.00	206.00	1.00
..........................................................................................TGGACGGAGAACTGAGAAGGGC.....................................................	22	1	387.00	14.00	7.00	59.00	303.00	4.00
..........................................................................................TGGACGGAGGACTGATAAGG.......................................................	20	1	383.00	48.00	0.00	32.00	303.00	0.00
..........................................................................................TGGACGGAGAACTGACAAGGG......................................................	21	1	379.00	42.00	3.00	98.00	235.00	1.00
..........................................................................................TGGACGGAGAACCGATAAGGGC.....................................................	22	1	372.00	82.00	14.00	100.00	140.00	36.00
..........................................................................................TGGACGGAGAACTGATAAGGGTTT...................................................	24	1	368.00	288.00	0.00	9.00	68.00	3.00
..........................................................................................TGGAAGGAGAACTGATAAGG.......................................................	20	1	365.00	6.00	1.00	57.00	301.00	0.00
..........................................................................................TGGACGGAGAACTGAGAAGGG......................................................	21	1	363.00	2.00	1.00	43.00	317.00	0.00
..........................................................................................TGGACGGAGAACTGATAGGG.......................................................	20	1	352.00	75.00	1.00	67.00	209.00	0.00
..........................................................................................GGGACGGAGAACTGATAAGGGC.....................................................	22	1	350.00	23.00	21.00	78.00	225.00	3.00
..........................................................................................TGGACGGAGAACTGATACGGGC.....................................................	22	1	346.00	14.00	12.00	127.00	190.00	3.00
..........................................................................................TGGACGGAGAACTGATGAGGGC.....................................................	22	1	338.00	65.00	15.00	112.00	126.00	20.00
..........................................................................................GGGACGGAGAACTGATAAGGG......................................................	21	1	336.00	13.00	1.00	49.00	273.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTTT.................................................	26	1	336.00	271.00	1.00	1.00	26.00	37.00
..........................................................................................TGGATGGAGAACTGATAAGGG......................................................	21	1	336.00	70.00	2.00	97.00	167.00	0.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAT...................................................	24	1	331.00	160.00	1.00	23.00	123.00	24.00
..........................................................................................TGGACTGAGAACTGATAAGGGC.....................................................	22	1	318.00	128.00	6.00	121.00	44.00	19.00
..........................................................................................TGGACGGAGAACTGATAAGGGG.....................................................	22	1	317.00	40.00	31.00	62.00	145.00	39.00
..........................................................................................TGGACGGAGAACTGTTAAGGG......................................................	21	1	315.00	9.00	0.00	56.00	250.00	0.00
..........................................................................................TGAACGGAGAACTGATAAGGGC.....................................................	22	1	311.00	61.00	11.00	66.00	170.00	3.00
..........................................................................................TGGACGGAGAACTAATAAGGGC.....................................................	22	1	295.00	32.00	17.00	125.00	117.00	4.00
..........................................................................................TGAACGGAGAACTGATAAGGG......................................................	21	1	286.00	26.00	1.00	79.00	180.00	0.00
..........................................................................................TGGACGGAGCACTGATAAGG.......................................................	20	1	284.00	17.00	0.00	40.00	227.00	0.00
..........................................................................................TGTACGGAGAACTGATAAGGG......................................................	21	1	278.00	156.00	0.00	56.00	66.00	0.00
..........................................................................................TGGACGGGGAACTGATAAGG.......................................................	20	1	278.00	61.00	1.00	25.00	191.00	0.00
..........................................................................................TGGACTGAGAACTGATAAGGG......................................................	21	1	262.00	76.00	0.00	128.00	55.00	3.00
..........................................................................................TGGACGGAGAACTGATAAGGGAA....................................................	23	1	257.00	97.00	1.00	58.00	99.00	2.00
..........................................................................................TGGACGGAGAACGGATAAGGGC.....................................................	22	1	253.00	3.00	3.00	31.00	142.00	74.00
..........................................................................................TGGACGGAGAACTGATCAGGGC.....................................................	22	1	251.00	8.00	31.00	66.00	146.00	0.00
..........................................................................................TGGACGGAGAACCGATAAGGG......................................................	21	1	247.00	46.00	2.00	60.00	139.00	0.00
..........................................................................................TGGACGGAGAACTGATCAGG.......................................................	20	1	240.00	3.00	2.00	63.00	172.00	0.00
..........................................................................................TGGACGGAGAACTGATACGG.......................................................	20	1	235.00	11.00	1.00	64.00	159.00	0.00

droWil1

GT--GGATCTAGACGCGAAGAGTCAGTTAAAGCTGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCAACA----------------------------------	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
..........................................................................................TGGACGGAGAACTGATAAGGGC.....................................................	22	1	2948324.00	100218.00	296529.00	2028759.00	522818.00
..........................................................................................TGGACGGAGAACTGATAAGGG......................................................	21	1	323833.00	51547.00	38303.00	187298.00	46685.00
..........................................................................................TGGACGGAGAACTGATAAGG.......................................................	20	1	76706.00	20464.00	4360.00	34823.00	17059.00
..........................................................................................TGGACGGAGAACTGATAAGGGCA....................................................	23	1	26022.00	1085.00	1102.00	5876.00	17959.00
..........................................................................................TGGACGGAGAACTGATAAGGGA.....................................................	22	1	21154.00	1252.00	1071.00	13201.00	5630.00
..........................................................................................TGGACGGAGAACTGATAAG........................................................	19	1	19807.00	2464.00	234.00	3640.00	13469.00
..........................................................................................TGGACGGAGAACTGATAAGGGCT....................................................	23	1	19359.00	2485.00	1194.00	9115.00	6565.00
..........................................................................................TGGACGGAGAACTGATAAGGAC.....................................................	22	1	14066.00	70.00	244.00	5205.00	8547.00
..........................................................................................TGGACGGAGAACTGATAAGGGT.....................................................	22	1	9677.00	1965.00	391.00	5791.00	1530.00
..........................................................................................TGGACGGAGAAATGATAAGGGC.....................................................	22	1	8854.00	23.00	154.00	8559.00	118.00
..........................................................................................CGGACGGAGAACTGATAAGGGC.....................................................	22	1	8282.00	130.00	451.00	7429.00	272.00
..........................................................................................TGGACGGAGAACTGATAAAGGC.....................................................	22	1	7374.00	102.00	330.00	6820.00	122.00
..........................................................................................TGGACGGAGAACTGATAA.........................................................	18	1	6332.00	17.00	13.00	79.00	6223.00
..........................................................................................TGGAAGGAGAACTGATAAGGGC.....................................................	22	1	5461.00	11.00	157.00	5268.00	25.00
..........................................................................................TGGACGGAGAACTGATAAGAGC.....................................................	22	1	4903.00	36.00	139.00	4632.00	96.00
.........................................................................................CTGGACGGAGAACTGATAAGGGC.....................................................	23	1	4779.00	135.00	617.00	3920.00	107.00
..........................................................................................TTGACGGAGAACTGATAAGGGC.....................................................	22	1	4644.00	121.00	742.00	2767.00	1014.00
..........................................................................................TGGACTGAGAACTGATAAGGGC.....................................................	22	1	4145.00	33.00	791.00	2865.00	456.00
..........................................................................................TGGACAGAGAACTGATAAGGGC.....................................................	22	1	4028.00	72.00	219.00	3579.00	158.00
..........................................................................................TGGATGGAGAACTGATAAGGGC.....................................................	22	1	3880.00	94.00	470.00	3105.00	211.00
..........................................................................................TGGACGGAGAACTGATAATGGC.....................................................	22	1	3728.00	59.00	831.00	2582.00	256.00
..........................................................................................AGGACGGAGAACTGATAAGGGC.....................................................	22	1	3702.00	22.00	94.00	3510.00	76.00
..........................................................................................TGGACGGAGAACTGATAAGGGCC....................................................	23	1	3633.00	223.00	232.00	1037.00	2141.00
..........................................................................................TAGACGGAGAACTGATAAGGGC.....................................................	22	1	3602.00	77.00	194.00	3134.00	197.00
..........................................................................................TGGACGGAGAGCTGATAAGGGC.....................................................	22	1	3482.00	119.00	353.00	2553.00	457.00
..........................................................................................TGTACGGAGAACTGATAAGGGC.....................................................	22	1	3457.00	95.00	601.00	2418.00	343.00
..........................................................................................TGGACGGAGAACCGATAAGGGC.....................................................	22	1	3443.00	101.00	326.00	2435.00	581.00
..........................................................................................TGGACGGAGAACTAATAAGGGC.....................................................	22	1	3381.00	39.00	103.00	3113.00	126.00
..........................................................................................TGGACGGAAAACTGATAAGGGC.....................................................	22	1	3282.00	29.00	110.00	3064.00	79.00
..........................................................................................GGGACGGAGAACTGATAAGGGC.....................................................	22	1	3270.00	12.00	66.00	3142.00	50.00
..........................................................................................TGGGCGGAGAACTGATAAGGGC.....................................................	22	1	3128.00	95.00	253.00	2215.00	565.00
..........................................................................................TGGACGGAGAACTGATAAGGCC.....................................................	22	1	3074.00	296.00	521.00	2087.00	170.00
..........................................................................................TGGACGGGGAACTGATAAGGGC.....................................................	22	1	2970.00	115.00	295.00	2216.00	344.00
..........................................................................................TGGACGGAGAACTGATAGGGGC.....................................................	22	1	2950.00	82.00	149.00	1825.00	894.00
..........................................................................................TGGACGGAGAACTGATAAGTGC.....................................................	22	1	2899.00	27.00	662.00	1602.00	608.00
..........................................................................................TGAACGGAGAACTGATAAGGGC.....................................................	22	1	2889.00	31.00	99.00	2661.00	98.00
..........................................................................................TGGACGGAGAACTGACAAGGGC.....................................................	22	1	2787.00	122.00	259.00	2265.00	141.00
...........................................................................................TGACGGAGAACTGATAAGGGC.....................................................	21	1	2772.00	79.00	258.00	2030.00	405.00
..........................................................................................TGGACGGATAACTGATAAGGGC.....................................................	22	1	2651.00	36.00	448.00	1887.00	280.00
..........................................................................................TGGACGGAGGACTGATAAGGGC.....................................................	22	1	2644.00	104.00	275.00	2081.00	184.00
..........................................................................................TGGACGGAGAACTGGTAAGGGC.....................................................	22	1	2598.00	98.00	238.00	1972.00	290.00
..........................................................................................TCGACGGAGAACTGATAAGGGC.....................................................	22	1	2288.00	79.00	203.00	1781.00	225.00
..........................................................................................TGGACGGAGAACTGATAAGGTC.....................................................	22	1	2284.00	101.00	538.00	1386.00	259.00
..........................................................................................TGGACGGCGAACTGATAAGGGC.....................................................	22	1	2214.00	80.00	129.00	1983.00	22.00
..........................................................................................TGGACGGAGAACTGATAAGCGC.....................................................	22	1	2052.00	52.00	154.00	1239.00	607.00
..........................................................................................TGCACGGAGAACTGATAAGGGC.....................................................	22	1	2005.00	74.00	184.00	1603.00	144.00
..........................................................................................TGGACGGAGAACAGATAAGGGC.....................................................	22	1	2004.00	8.00	38.00	842.00	1116.00
..........................................................................................TGGACGGAGCACTGATAAGGGC.....................................................	22	1	1947.00	49.00	166.00	1494.00	238.00
..........................................................................................TGGACCGAGAACTGATAAGGGC.....................................................	22	1	1931.00	42.00	122.00	1405.00	362.00
..........................................................................................TGGACGGAGAACTGATAACGGC.....................................................	22	1	1928.00	67.00	221.00	1538.00	102.00
..........................................................................................TGGACGTAGAACTGATAAGGGC.....................................................	22	1	1865.00	19.00	635.00	1177.00	34.00
..........................................................................................TGGACGGAGACCTGATAAGGGC.....................................................	22	1	1858.00	52.00	138.00	1645.00	23.00
..........................................................................................TGGACGGAGAACTGCTAAGGGC.....................................................	22	1	1852.00	64.00	155.00	1614.00	19.00
..........................................................................................TGGACGGAGAACTGATGAGGGC.....................................................	22	1	1835.00	49.00	181.00	1331.00	274.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTT...................................................	24	1	1834.00	464.00	37.00	459.00	874.00
..........................................................................................TGGACGGAGAACTGATACGGGC.....................................................	22	1	1688.00	45.00	104.00	1513.00	26.00
..........................................................................................TGGCCGGAGAACTGATAAGGGC.....................................................	22	1	1682.00	65.00	165.00	1437.00	15.00
..........................................................................................TGGACGGAGAACTTATAAGGGC.....................................................	22	1	1667.00	31.00	320.00	1040.00	276.00
..........................................................................................TGGACGGACAACTGATAAGGGC.....................................................	22	1	1654.00	40.00	139.00	1312.00	163.00
..........................................................................................TGGACGGAGAATTGATAAGGGC.....................................................	22	1	1593.00	41.00	99.00	1325.00	128.00
..........................................................................................TGGACGGAGAACGGATAAGGGC.....................................................	22	1	1581.00	6.00	23.00	173.00	1379.00
..........................................................................................TGGACGGAGAACTGATCAGGGC.....................................................	22	1	1522.00	43.00	100.00	1375.00	4.00
..........................................................................................TGGACGGAGAACTGAAAAGGGC.....................................................	22	1	1521.00	17.00	46.00	1351.00	107.00
..........................................................................................TGGACGGAGAACTCATAAGGGC.....................................................	22	1	1496.00	38.00	95.00	1097.00	266.00
...........................................................................................GGACGGAGAACTGATAAGGGC.....................................................	21	1	1382.00	39.00	106.00	926.00	311.00
..........................................................................................TGGACGGAGAACTGATAAGGA......................................................	21	1	1372.00	146.00	37.00	557.00	632.00
..........................................................................................TGGACGGAGAACTGATAAGGGAA....................................................	23	1	1266.00	78.00	107.00	182.00	899.00
..........................................................................................TGGACGGAGAACTGATAAGGGCG....................................................	23	1	1252.00	40.00	29.00	166.00	1017.00
..........................................................................................TGGACGGAGAACTGATAAGGC......................................................	21	1	1159.00	106.00	158.00	787.00	108.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAT...................................................	24	1	1130.00	72.00	31.00	262.00	765.00
..........................................................................................TGGACGGAGAACTGATAAGGT......................................................	21	1	1082.00	302.00	73.00	516.00	191.00
..........................................................................................TGGACGGAGAACTGATAAGGGG.....................................................	22	1	1058.00	17.00	31.00	261.00	749.00
..........................................................................................TGGACGGAGAACTGATAAA........................................................	19	1	1040.00	22.00	0.00	30.00	988.00
..........................................................................................TGGACGGTGAACTGATAAGGGC.....................................................	22	1	909.00	24.00	67.00	770.00	48.00
..........................................................................................TGGACGGAGAAATGATAAGGG......................................................	21	1	886.00	26.00	24.00	821.00	15.00
............................................................................................GACGGAGAACTGATAAGGGC.....................................................	20	1	886.00	20.00	61.00	464.00	341.00
..........................................................................................CGGACGGAGAACTGATAAGGG......................................................	21	1	814.00	57.00	61.00	673.00	23.00
..........................................................................................TGGACGxxGAACTGATAAGGGC.....................................................	20	1	709.00	18.00	111.00	555.00	25.00
..........................................................................................TGGACGAAGAACTGATAAGGGC.....................................................	22	1	709.00	32.00	86.00	513.00	78.00
..........................................................................................TGGACGGAGAACTGATATGGGC.....................................................	22	1	696.00	15.00	64.00	586.00	31.00
..........................................................................................TGGACGGAGAACTGATAAAGG......................................................	21	1	690.00	32.00	22.00	580.00	56.00
..........................................................................................TGGACxGAGAACTGATAAGGGC.....................................................	21	1	607.00	19.00	60.00	454.00	74.00
..........................................................................................TGGACGGAGAACTGATTAGGGC.....................................................	22	1	589.00	12.00	42.00	521.00	14.00
..........................................................................................TGGACTGAGAACTGATAAGGG......................................................	21	1	571.00	51.00	110.00	318.00	92.00
..........................................................................................TGGTCGGAGAACTGATAAGGGC.....................................................	22	1	560.00	15.00	37.00	462.00	46.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTT..................................................	25	1	554.00	145.00	3.00	99.00	307.00
..........................................................................................TGGACGGAGAACTGTTAAGGGC.....................................................	22	1	550.00	6.00	36.00	464.00	44.00
...................................................CCTTATCATTCTCGCGCCCCGT............................................................................................	22	1	549.00	37.00	320.00	160.00	32.00
.........................................................................................CTGGACGGAGAACTGATAAGGG......................................................	22	1	538.00	71.00	78.00	373.00	16.00
..........................................................................................TTGACGGAGAACTGATAAGGG......................................................	21	1	535.00	63.00	102.00	259.00	111.00
..........................................................................................TGGAAGGAGAACTGATAAGGG......................................................	21	1	510.00	6.00	16.00	484.00	4.00
..........................................................................................TGGACGGAGTACTGATAAGGGC.....................................................	22	1	507.00	17.00	41.00	399.00	50.00
..........................................................................................TGGACGGAxAACTGATAAGGGC.....................................................	21	1	499.00	16.00	46.00	371.00	66.00
..........................................................................................TGGACGGAGAACTGATAAGAG......................................................	21	1	487.00	15.00	15.00	440.00	17.00
..........................................................................................TGTACGGAGAACTGATAAGGG......................................................	21	1	468.00	59.00	81.00	312.00	16.00
..........................................................................................TGGACGGAGAACTGATAAGGGTT....................................................	23	1	464.00	76.00	7.00	241.00	140.00
..........................................................................................TGGACGGAGAACTGATAGGGC......................................................	21	1	449.00	26.00	47.00	334.00	42.00
..........................................................................................TGGACGCAGAACTGATAAGGGC.....................................................	22	1	446.00	45.00	135.00	218.00	48.00
..........................................................................................TGGATGGAGAACTGATAAGGG......................................................	21	1	427.00	52.00	53.00	300.00	22.00
..........................................................................................TGGACGGAGAACTGATAATGG......................................................	21	1	412.00	22.00	147.00	226.00	17.00
..........................................................................................TGGACGGAGAACTGATAAGGGCCT...................................................	24	1	408.00	43.00	15.00	207.00	143.00

droVir3

TT--GGGCT-----------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAA--------------------------------	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
..........................................................................................TGGACGGAGAACTGATAAGGGC.....................................................	22	1	498235.00	207708.00	47456.00	46295.00	76392.00	120384.00
..........................................................................................TGGACGGAGAACTGATAAGGG......................................................	21	1	137018.00	78070.00	41147.00	3901.00	4345.00	9555.00
..........................................................................................TGGACGGAGAACTGATAAGG.......................................................	20	1	61633.00	40490.00	13675.00	395.00	1941.00	5132.00
..........................................................................................TGGACGGAGAACTGATAAG........................................................	19	1	22661.00	6644.00	7098.00	34.00	1640.00	7245.00
..........................................................................................TGGACGGAGAACTGATAAGGGCT....................................................	23	1	17253.00	8193.00	2154.00	356.00	2821.00	3729.00
..........................................................................................TGGACGGAGAACTGATAAGGGCA....................................................	23	1	10617.00	3280.00	777.00	249.00	2014.00	4297.00
..........................................................................................TGGACGGAGAACTGATAAGGGA.....................................................	22	1	7385.00	2968.00	1664.00	207.00	779.00	1767.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTT...................................................	24	1	6449.00	2887.00	162.00	38.00	1440.00	1922.00
..........................................................................................TGGACGGAGAACTGATAAGGGT.....................................................	22	1	6086.00	3871.00	1344.00	120.00	242.00	509.00
..........................................................................................TGGACGGAGAACTGATAA.........................................................	18	1	5122.00	31.00	130.00	0.00	786.00	4175.00
..........................................................................................TGGACGGAGAACTGATAAGGAC.....................................................	22	1	4767.00	238.00	49.00	90.00	1365.00	3025.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTT..................................................	25	1	2777.00	984.00	36.00	6.00	681.00	1070.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAT...................................................	24	1	2697.00	836.00	78.00	20.00	602.00	1161.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTTT.................................................	26	1	1698.00	399.00	9.00	2.00	559.00	729.00
..........................................................................................TGGACGGAGAACTGATAAGGGCC....................................................	23	1	1539.00	313.00	41.00	37.00	542.00	606.00
..........................................................................................TGGACGGAGAACTGATAAA........................................................	19	1	1320.00	65.00	50.00	0.00	164.00	1041.00
..........................................................................................TGGACGGAGAACTGATAAGCGC.....................................................	22	1	1084.00	121.00	496.00	342.00	60.00	65.00
..........................................................................................TGGACGGAGAACTGATAAGGA......................................................	21	1	928.00	415.00	92.00	8.00	103.00	310.00
..........................................................................................TGGACGGAGAACTGATAAGGT......................................................	21	1	925.00	578.00	241.00	19.00	22.00	65.00
..........................................................................................TGGACGGAGAACTGATAAGTGC.....................................................	22	1	890.00	43.00	114.00	569.00	76.00	88.00
..........................................................................................TGGACGGAGAACTGATAAGGGG.....................................................	22	1	857.00	194.00	53.00	75.00	186.00	349.00
..........................................................................................TGGACGGAGAACTGATAAGGCC.....................................................	22	1	840.00	445.00	223.00	90.00	43.00	39.00
..........................................................................................TGGACGGAGAACTGATAAGGGTT....................................................	23	1	791.00	377.00	154.00	1.00	76.00	183.00
..........................................................................................TGGACGGAGAACTGATAAAGGC.....................................................	22	1	701.00	276.00	52.00	316.00	19.00	38.00
..........................................................................................TGGACGGAGAACTGATAATGGC.....................................................	22	1	700.00	125.00	89.00	431.00	28.00	27.00
..........................................................................................TGGACGGAGAACTGATAAGGGCG....................................................	23	1	659.00	56.00	34.00	5.00	214.00	350.00
..........................................................................................TGGACGGAGAACTGATAAGGTC.....................................................	22	1	643.00	141.00	134.00	259.00	55.00	54.00
..........................................................................................TGGACGGGGAACTGATAAGGGC.....................................................	22	1	636.00	194.00	110.00	97.00	95.00	140.00
..........................................................................................CGGACGGAGAACTGATAAGGGC.....................................................	22	1	599.00	239.00	138.00	83.00	51.00	88.00
..........................................................................................TGGACGGAGAGCTGATAAGGGC.....................................................	22	1	593.00	242.00	79.00	80.00	81.00	111.00
..........................................................................................TGGGCGGAGAACTGATAAGGGC.....................................................	22	1	588.00	168.00	91.00	84.00	102.00	143.00
..........................................................................................TGGACGGAGGACTGATAAGGGC.....................................................	22	1	563.00	201.00	169.00	126.00	28.00	39.00
..........................................................................................TGGACGGAGAACTGATAGGGGC.....................................................	22	1	562.00	113.00	63.00	60.00	104.00	222.00
..........................................................................................TGGACGGAGAACTGATAAGGGAA....................................................	23	1	555.00	183.00	64.00	31.00	81.00	196.00
.........................................................................................CTGGACGGAGAACTGATAAGGGC.....................................................	23	1	549.00	343.00	111.00	71.00	14.00	10.00
..........................................................................................TGGACGGAGAACTGATAAGCG......................................................	21	1	548.00	52.00	472.00	23.00	0.00	1.00
..........................................................................................TTGACGGAGAACTGATAAGGGC.....................................................	22	1	542.00	169.00	22.00	94.00	137.00	120.00
..........................................................................................TGGACGGAGAACTGGTAAGGGC.....................................................	22	1	481.00	187.00	90.00	83.00	59.00	62.00
..........................................................................................TGGACGGAGAACTGACAAGGGC.....................................................	22	1	479.00	284.00	72.00	65.00	18.00	40.00
..........................................................................................TGGACGGAGAACTGATAAGAGC.....................................................	22	1	471.00	216.00	53.00	166.00	15.00	21.00
..........................................................................................TGGACGGAGAACTGATAACGGC.....................................................	22	1	462.00	128.00	132.00	182.00	7.00	13.00
..........................................................................................TGGACGGAGAACTGATAAGGGTTT...................................................	24	1	452.00	174.00	28.00	2.00	54.00	194.00
..........................................................................................TGGACGGAGCACTGATAAGGGC.....................................................	22	1	431.00	49.00	78.00	223.00	26.00	55.00
..........................................................................................TGGACGGAGAACTGATAAGGC......................................................	21	1	430.00	184.00	192.00	5.00	18.00	31.00
..........................................................................................TGGACGGAGAACTGATAAGA.......................................................	20	1	429.00	89.00	25.00	0.00	36.00	279.00
..........................................................................................TGGACGGAGAACCGATAAGGGC.....................................................	22	1	420.00	235.00	50.00	65.00	28.00	42.00
..........................................................................................TGGACGGAGAACTGCTAAGGGC.....................................................	22	1	398.00	192.00	70.00	128.00	4.00	4.00
..........................................................................................TGGACGGAGAACTGATGAGGGC.....................................................	22	1	377.00	110.00	42.00	77.00	54.00	94.00
..........................................................................................TGGACGGAGAACTGATAAGGGAT....................................................	23	1	371.00	121.00	16.00	2.00	85.00	147.00
..........................................................................................TGTACGGAGAACTGATAAGGGC.....................................................	22	1	370.00	169.00	12.00	111.00	42.00	36.00
..........................................................................................TAGACGGAGAACTGATAAGGGC.....................................................	22	1	345.00	106.00	43.00	113.00	29.00	54.00
..........................................................................................TGGATGGAGAACTGATAAGGGC.....................................................	22	1	342.00	159.00	59.00	33.00	27.00	64.00
..........................................................................................TGGACAGAGAACTGATAAGGGC.....................................................	22	1	324.00	138.00	37.00	75.00	20.00	54.00
..........................................................................................TGGAAGGAGAACTGATAAGGGC.....................................................	22	1	318.00	25.00	254.00	36.00	0.00	3.00
..........................................................................................TGGACGGAGAAATGATAAGGGC.....................................................	22	1	314.00	125.00	23.00	29.00	22.00	115.00
...............................................................................ATCTAGACAGCCGGACGG....................................................................	18	1	311.00	4.00	1.00	0.00	272.00	34.00
..........................................................................................GGGACGGAGAACTGATAAGGGC.....................................................	22	1	311.00	122.00	61.00	107.00	12.00	9.00
...........................................................................................TGACGGAGAACTGATAAGGGC.....................................................	21	1	305.00	169.00	6.00	6.00	65.00	59.00
..........................................................................................TGGACGGAGGACTGATAAGGG......................................................	21	1	301.00	69.00	210.00	12.00	7.00	3.00
..........................................................................................TGGACGGAGAACTAATAAGGGC.....................................................	22	1	300.00	136.00	61.00	69.00	13.00	21.00
..........................................................................................TGGACGGAGAACTGAGAAGGGC.....................................................	22	1	297.00	77.00	147.00	60.00	9.00	4.00
..........................................................................................TGGACGGATAACTGATAAGGGC.....................................................	22	1	288.00	58.00	12.00	140.00	40.00	38.00
..........................................................................................TGGACGGAGAACTGAAAAGGGC.....................................................	22	1	286.00	198.00	11.00	13.00	40.00	24.00
..........................................................................................TGGACGGAGAACTTATAAGGGC.....................................................	22	1	280.00	65.00	15.00	133.00	42.00	25.00
..........................................................................................TGGACGGAGAACTGATAAGT.......................................................	20	1	275.00	91.00	32.00	3.00	26.00	123.00
..........................................................................................TGGACTGAGAACTGATAAGGGC.....................................................	22	1	275.00	83.00	21.00	88.00	25.00	58.00
..........................................................................................TGGACGGAGAACTGCTAAGGG......................................................	21	1	270.00	126.00	124.00	17.00	0.00	3.00
..........................................................................................TGGACGGAGAACTCATAAGGGC.....................................................	22	1	251.00	74.00	67.00	57.00	23.00	30.00
..........................................................................................TGGACGGAGAACTGATCAGGGC.....................................................	22	1	251.00	65.00	36.00	116.00	13.00	21.00
..........................................................................................TGGACGGAGAACTGATACGGGC.....................................................	22	1	247.00	64.00	57.00	115.00	4.00	7.00
.........................................................................................CTGGACGGAGAACTGATAAGGG......................................................	22	1	231.00	129.00	91.00	4.00	2.00	5.00
..........................................................................................TGGACGGAGTACTGATAAGGGC.....................................................	22	1	228.00	18.00	105.00	67.00	11.00	27.00
..........................................................................................TGGACGGAGAACTGATAAGGGCCT...................................................	24	1	226.00	110.00	8.00	1.00	52.00	55.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAA...................................................	24	1	219.00	25.00	9.00	20.00	56.00	109.00
..........................................................................................TGGACGGAGAACTGATAGGGG......................................................	21	1	213.00	66.00	117.00	6.00	6.00	18.00
...........................................................................................GGACGGAGAACTGATAAGGGC.....................................................	21	1	212.00	71.00	35.00	13.00	40.00	53.00
..........................................................................................TGGACGGGGAACTGATAAGGG......................................................	21	1	200.00	83.00	98.00	8.00	7.00	4.00
..........................................................................................TCGACGGAGAACTGATAAGGGC.....................................................	22	1	199.00	87.00	20.00	50.00	20.00	22.00
..........................................................................................TGGACGGAGAACTGATAAGTG......................................................	21	1	196.00	18.00	109.00	68.00	0.00	1.00
..........................................................................................TGCACGGAGAACTGATAAGGGC.....................................................	22	1	195.00	75.00	31.00	58.00	15.00	16.00
..........................................................................................TGGACGGAGAACAGATAAGGGC.....................................................	22	1	192.00	154.00	22.00	10.00	2.00	4.00
..........................................................................................TGGACGGAGACCTGATAAGGGC.....................................................	22	1	192.00	86.00	36.00	61.00	3.00	6.00
..........................................................................................TGGACGAAGAACTGATAAGGGC.....................................................	22	1	188.00	97.00	39.00	30.00	12.00	10.00
..........................................................................................TGGACCGAGAACTGATAAGGGC.....................................................	22	1	187.00	47.00	41.00	24.00	24.00	51.00
..........................................................................................TGGACGTAGAACTGATAAGGGC.....................................................	22	1	184.00	42.00	9.00	121.00	6.00	6.00
..........................................................................................TGGAAGGAGAACTGATAAGGG......................................................	21	1	179.00	5.00	171.00	3.00	0.00	0.00
..........................................................................................TGGACGGAGAACTGGTAAGGG......................................................	21	1	178.00	83.00	70.00	14.00	6.00	5.00
..........................................................................................TGGACGGAGAGCTGATAAGGG......................................................	21	1	174.00	76.00	69.00	12.00	5.00	12.00
..........................................................................................TGGACGGAGAACTGATAAAGG......................................................	21	1	174.00	64.00	54.00	26.00	11.00	19.00
..........................................................................................AGGACGGAGAACTGATAAGGGC.....................................................	22	1	172.00	56.00	48.00	37.00	17.00	14.00
..........................................................................................TGGACGGAGAACTGATAACGG......................................................	21	1	165.00	50.00	92.00	20.00	0.00	3.00
..........................................................................................TGAACGGAGAACTGATAAGGGC.....................................................	22	1	164.00	48.00	47.00	32.00	18.00	19.00
..........................................................................................TGGACGGAGAACTGACAAGGG......................................................	21	1	164.00	97.00	61.00	6.00	0.00	0.00
..........................................................................................TGGACGGAGAATTGATAAGGGC.....................................................	22	1	163.00	63.00	38.00	16.00	20.00	26.00
..........................................................................................TGGACGGAGCACTGATAAGGG......................................................	21	1	163.00	32.00	90.00	31.00	3.00	7.00
..........................................................................................CGGACGGAGAACTGATAAGGG......................................................	21	1	160.00	68.00	83.00	6.00	1.00	2.00
..........................................................................................TGGACGGAGAACTGATTT.........................................................	18	1	157.00	2.00	7.00	0.00	16.00	132.00
..........................................................................................TGGACGGAGAACTGATAATGG......................................................	21	1	157.00	40.00	81.00	35.00	1.00	0.00
..........................................................................................TGGGCGGAGAACTGATAAGGG......................................................	21	1	153.00	58.00	67.00	9.00	8.00	11.00
..........................................................................................TGGACGGAGAACTGATACGGG......................................................	21	1	150.00	34.00	98.00	17.00	1.00	0.00
..........................................................................................TGGACGGAGAACTGTTAAGGGC.....................................................	22	1	143.00	29.00	87.00	16.00	6.00	5.00

droMoj3

TT--GGGCA-----------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAA--------------------------------	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
..........................................................................................TGGACGGAGAACTGATAAGGGC.....................................................	22	1	347929.00	111146.00	99797.00	70475.00	66511.00
..........................................................................................TGGACGGAGAACTGATAAGGG......................................................	21	1	206236.00	54964.00	87015.00	55786.00	8471.00
..........................................................................................TGGACGGAGAACTGATAAGG.......................................................	20	1	65496.00	18891.00	28783.00	17206.00	616.00
..........................................................................................TGGACGGAGAACTGATAAG........................................................	19	1	13861.00	2950.00	6661.00	4225.00	25.00
..........................................................................................TGGACGGAGAACTGATAAGGGCT....................................................	23	1	13041.00	4557.00	4924.00	2949.00	611.00
..........................................................................................TGGACGGAGAACTGATAAGGGT.....................................................	22	1	9082.00	2881.00	3779.00	2220.00	202.00
..........................................................................................TGGACGGAGAACTGATAAGGGA.....................................................	22	1	7301.00	1856.00	3262.00	1935.00	248.00
..........................................................................................TGGACGGAGAACTGATAAGGGCA....................................................	23	1	7301.00	2308.00	2832.00	1789.00	372.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTT...................................................	24	1	2760.00	1650.00	708.00	351.00	51.00
..........................................................................................TGGACGGAGCACTGATAAGGGC.....................................................	22	1	1312.00	14.00	206.00	696.00	396.00
..........................................................................................TGGAAGGAGAACTGATAAGGGC.....................................................	22	1	1101.00	15.00	492.00	221.00	373.00
..........................................................................................TGGACGGAGAACTGATCAGGG......................................................	21	1	1088.00	7.00	160.00	857.00	64.00
..........................................................................................TGGACGGAGAACTGATAAGGT......................................................	21	1	1052.00	363.00	397.00	283.00	9.00
..........................................................................................TGGACGGAGCACTGATAAGGG......................................................	21	1	1018.00	20.00	248.00	693.00	57.00
..........................................................................................TGGACGGAGAACTGCTAAGGGC.....................................................	22	1	1007.00	13.00	193.00	595.00	206.00
..........................................................................................TGGACGGAGAACTGCTAAGGG......................................................	21	1	979.00	7.00	293.00	639.00	40.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAT...................................................	24	1	948.00	390.00	366.00	169.00	23.00
..........................................................................................TGGACGGAGAACTGATCAGGGC.....................................................	22	1	819.00	8.00	95.00	537.00	179.00
..........................................................................................TGGACGGAGAACTGATAATGGC.....................................................	22	1	814.00	185.00	175.00	381.00	73.00
..........................................................................................TGGACGGAGAACTGATAAGTGC.....................................................	22	1	799.00	158.00	226.00	341.00	74.00
..........................................................................................TGGACGGAGAACTGATACGGG......................................................	21	1	797.00	11.00	178.00	559.00	49.00
..........................................................................................TGGACGGAGAACTGATAAGGGTT....................................................	23	1	775.00	240.00	326.00	203.00	6.00
..........................................................................................TGGACGGAGGACTGATAAGGGC.....................................................	22	1	764.00	75.00	265.00	273.00	151.00
..........................................................................................TGGACGGAGAACTGATAAGTG......................................................	21	1	741.00	61.00	257.00	412.00	11.00
..........................................................................................TGGACGGAGAACTGATAAGCGC.....................................................	22	1	734.00	30.00	349.00	267.00	88.00
..........................................................................................TGGACGGAGAACTGATAAGGTC.....................................................	22	1	694.00	175.00	275.00	210.00	34.00
..........................................................................................TGGACGGAGAACTGATAAAGGC.....................................................	22	1	656.00	113.00	111.00	257.00	175.00
..........................................................................................TGGACGGAGGACTGATAAGGG......................................................	21	1	633.00	34.00	307.00	269.00	23.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTT..................................................	25	1	630.00	423.00	136.00	63.00	8.00
..........................................................................................TGGACGGAGAACTGATAAGGC......................................................	21	1	613.00	267.00	233.00	108.00	5.00
..........................................................................................TGGACGGAGAACTGATACGGGC.....................................................	22	1	609.00	16.00	113.00	339.00	141.00
..........................................................................................TGGACGGAGAGCTGATAAGGGC.....................................................	22	1	593.00	87.00	233.00	146.00	127.00
..........................................................................................TGGACGGAGAACTGATAAGCG......................................................	21	1	587.00	22.00	325.00	228.00	12.00
..........................................................................................TGGACGGAGAACTGATAATGG......................................................	21	1	587.00	85.00	147.00	339.00	16.00
..........................................................................................TGGACGGAGAACTGATAAGGA......................................................	21	1	575.00	201.00	230.00	137.00	7.00
..........................................................................................TGGACGGGGAACTGATAAGGGC.....................................................	22	1	542.00	83.00	206.00	152.00	101.00
..........................................................................................TGGGCGGAGAACTGATAAGGGC.....................................................	22	1	509.00	59.00	223.00	132.00	95.00
..........................................................................................TGGAAGGAGAACTGATAAGGG......................................................	21	1	508.00	13.00	309.00	134.00	52.00
..........................................................................................TAGACGGAGAACTGATAAGGGC.....................................................	22	1	483.00	38.00	100.00	226.00	119.00
..........................................................................................CGGACGGAGAACTGATAAGGGC.....................................................	22	1	482.00	72.00	178.00	131.00	101.00
.........................................................................................CTGGACGGAGAACTGATAAGGGC.....................................................	23	1	477.00	47.00	180.00	146.00	104.00
..........................................................................................TGGACGGAGAACTGATAA.........................................................	18	1	444.00	13.00	252.00	172.00	7.00
..........................................................................................TGGACGGAGAACTGGTAAGGGC.....................................................	22	1	444.00	63.00	152.00	102.00	127.00
..........................................................................................TGGATGGAGAACTGATAAGGGC.....................................................	22	1	436.00	117.00	131.00	84.00	104.00
..........................................................................................TGGACGGGGAACTGATAAGGG......................................................	21	1	431.00	39.00	234.00	135.00	23.00
..........................................................................................TGGACGGAGAACTGATAAGGGAA....................................................	23	1	428.00	142.00	159.00	85.00	42.00
..........................................................................................TGGACAGAGAACTGATAAGGGC.....................................................	22	1	423.00	87.00	88.00	158.00	90.00
..........................................................................................TGGACGGAGAACTGATAAGGGCC....................................................	23	1	417.00	162.00	102.00	99.00	54.00
..........................................................................................TGGACGGAGAACTGATAACGGC.....................................................	22	1	399.00	34.00	186.00	116.00	63.00
..........................................................................................TGGACGGAGAACTGACAAGGGC.....................................................	22	1	397.00	35.00	157.00	141.00	64.00
..........................................................................................TGGACGGAGAACTGATCAGG.......................................................	20	1	385.00	3.00	67.00	310.00	5.00
..........................................................................................TGGACGGAGAACTGATAGGGG......................................................	21	1	382.00	34.00	235.00	104.00	9.00
..........................................................................................TGGCCGGAGAACTGATAAGGGC.....................................................	22	1	377.00	22.00	116.00	210.00	29.00
..........................................................................................TGGACGGAGAGCTGATAAGGG......................................................	21	1	365.00	49.00	207.00	94.00	15.00
..........................................................................................TGGACGGAGAACTGATAAGAGC.....................................................	22	1	352.00	47.00	118.00	107.00	80.00
..........................................................................................TGGACGGAGAACTGATAGGGGC.....................................................	22	1	347.00	43.00	131.00	119.00	54.00
..........................................................................................TGGACGGAGAACTGATAAGGCC.....................................................	22	1	344.00	120.00	177.00	32.00	15.00
..........................................................................................TGGACGGAGTACTGATAAGGGC.....................................................	22	1	343.00	10.00	129.00	123.00	81.00
..........................................................................................TGGACGGAGACCTGATAAGGGC.....................................................	22	1	338.00	12.00	81.00	144.00	101.00
..........................................................................................TGGACGGAGAACTGGTAAGGG......................................................	21	1	331.00	31.00	181.00	98.00	21.00
..........................................................................................TGGACGGAGAACTGATAAAGG......................................................	21	1	330.00	26.00	98.00	185.00	21.00
..........................................................................................TGGGCGGAGAACTGATAAGGG......................................................	21	1	328.00	46.00	165.00	101.00	16.00
..........................................................................................TGGACGGAGAACCGATAAGGGC.....................................................	22	1	324.00	43.00	126.00	92.00	63.00
..........................................................................................TGGACGGAGAACTGATGAGGGC.....................................................	22	1	319.00	43.00	115.00	85.00	76.00
..........................................................................................CGGACGGAGAACTGATAAGGG......................................................	21	1	299.00	35.00	162.00	93.00	9.00
..........................................................................................TGGACGGAGTACTGATAAGGG......................................................	21	1	290.00	3.00	149.00	124.00	14.00
..........................................................................................TGGACGGAGCACTGATAAGG.......................................................	20	1	288.00	2.00	88.00	195.00	3.00
...................................................CCTTATCATTCTCGCGCCCCGT............................................................................................	22	1	284.00	65.00	89.00	69.00	61.00
..........................................................................................TGGACGGAGAACTGATAAGGGG.....................................................	22	1	279.00	21.00	88.00	66.00	104.00
..........................................................................................TGGACGGAGAACTAATAAGGGC.....................................................	22	1	273.00	39.00	99.00	93.00	42.00
..........................................................................................TAGACGGAGAACTGATAAGGG......................................................	21	1	268.00	23.00	67.00	164.00	14.00
..........................................................................................TGTACGGAGAACTGATAAGGGC.....................................................	22	1	266.00	220.00	14.00	23.00	9.00
..........................................................................................TTGACGGAGAACTGATAAGGGC.....................................................	22	1	257.00	197.00	25.00	28.00	7.00
.........................................................................................CTGGACGGAGAACTGATAAGGG......................................................	22	1	255.00	11.00	141.00	88.00	15.00
..........................................................................................TGGACGGAGAACTGACAAGGG......................................................	21	1	255.00	18.00	138.00	92.00	7.00
..........................................................................................TGGACGGAGAACTGAGAAGGGC.....................................................	22	1	252.00	0.00	129.00	92.00	31.00
..........................................................................................TGGACAGAGAACTGATAAGGG......................................................	21	1	252.00	23.00	93.00	122.00	14.00
..........................................................................................TGGACGGAGAACTGCTAAGG.......................................................	20	1	249.00	3.00	58.00	186.00	2.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTC...................................................	24	1	247.00	195.00	35.00	13.00	4.00
..........................................................................................TGGACGGAGAACTGATAAGC.......................................................	20	1	244.00	94.00	101.00	48.00	1.00
..........................................................................................TGGACGGAGAACTGATAAGGAC.....................................................	22	1	241.00	67.00	81.00	65.00	28.00
..........................................................................................TGGACTGAGAACTGATAAGGGC.....................................................	22	1	239.00	179.00	25.00	21.00	14.00
..........................................................................................TGGACGGAGAACTGATAAGAG......................................................	21	1	235.00	22.00	101.00	99.00	13.00
..........................................................................................TGGCCGGAGAACTGATAAGGG......................................................	21	1	223.00	7.00	94.00	119.00	3.00
..........................................................................................TGGATGGAGAACTGATAAGGG......................................................	21	1	223.00	45.00	105.00	63.00	10.00
..........................................................................................TGGACGGAGAACTGATAACGG......................................................	21	1	220.00	14.00	124.00	80.00	2.00
..........................................................................................AGGACGGAGAACTGATAAGGGC.....................................................	22	1	217.00	33.00	96.00	56.00	32.00
..........................................................................................TGGACGGAGAACTGATAAGGGCG....................................................	23	1	217.00	36.00	102.00	74.00	5.00
..........................................................................................TGGACGGAGAACTGATACGG.......................................................	20	1	215.00	4.00	61.00	150.00	0.00
..........................................................................................TGGACGGAGAACCGATAAGGG......................................................	21	1	211.00	26.00	105.00	71.00	9.00
..........................................................................................TGGACGGAGAACTGATGAGGG......................................................	21	1	208.00	13.00	94.00	88.00	13.00
..........................................................................................TGAACGGAGAACTGATAAGGGC.....................................................	22	1	202.00	26.00	91.00	58.00	27.00
..........................................................................................TGGACGGAGGACTGATAAGG.......................................................	20	1	200.00	11.00	112.00	75.00	2.00
..........................................................................................TGGACGGAGAAATGATAAGGGC.....................................................	22	1	195.00	12.00	49.00	45.00	89.00
..........................................................................................GGGACGGAGAACTGATAAGGGC.....................................................	22	1	192.00	27.00	87.00	51.00	27.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTTT.................................................	26	1	187.00	125.00	42.00	17.00	3.00
..........................................................................................TGGACGGCGAACTGATAAGGGC.....................................................	22	1	186.00	13.00	44.00	89.00	40.00
..........................................................................................TGGACGGAGAACTCATAAGGGC.....................................................	22	1	184.00	11.00	92.00	58.00	23.00
..........................................................................................TGGACGGAGAACTGATAAGT.......................................................	20	1	182.00	79.00	59.00	44.00	0.00
..........................................................................................TGGACGTAGAACTGATAAGGGC.....................................................	22	1	182.00	130.00	19.00	18.00	15.00
..........................................................................................TGGACGGATAACTGATAAGGGC.....................................................	22	1	177.00	101.00	27.00	41.00	8.00

droGri2

AT--GGT------------------------TTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGGATAACTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------	Size	Hit Count	Total Norm	V109 Male body
..........................................................................................TGGACGGAGAACTGATAAGGGC.....................................................	22	1	27237.00	27237.00
..........................................................................................TGGACGGAGAACTGATAAGGG......................................................	21	1	17278.00	17278.00
..........................................................................................TGGACGGAGAACTGATAAGG.......................................................	20	1	5980.00	5980.00
..........................................................................................TGGACGGAGAACTGATAAGGGCT....................................................	23	1	1577.00	1577.00
..........................................................................................TGGACGGAGAACTGATAAG........................................................	19	1	597.00	597.00
..........................................................................................TGGACGGAGAACTGATAAGGGT.....................................................	22	1	507.00	507.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTT...................................................	24	1	392.00	392.00
..........................................................................................TGGACGGAGAACTGATACGGGC.....................................................	22	1	353.00	353.00
..........................................................................................TGGACGGAGAACTGATAAGGGA.....................................................	22	1	293.00	293.00
..........................................................................................TGGACGGAGAACTGATACGGG......................................................	21	1	259.00	259.00
..........................................................................................TGGACGGAGAACTGATAAGGGCA....................................................	23	1	194.00	194.00
..........................................................................................TGGACGGAGAACTGATAGGGGC.....................................................	22	1	172.00	172.00
..........................................................................................TGGACGGAGAACTGATATGGGC.....................................................	22	1	164.00	164.00
..........................................................................................TGGACGGAGAACTGATATGGG......................................................	21	1	114.00	114.00
..........................................................................................TGGACGGACAACTGATAAGGGC.....................................................	22	1	103.00	103.00
..........................................................................................TGGACGGAGAACTGATAGGGG......................................................	21	1	100.00	100.00
..........................................................................................TGGACGGATAACTGATAAGGGC.....................................................	22	1	86.00	86.00
..........................................................................................TGGACGGACAACTGATAAGGG......................................................	21	1	79.00	79.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTT..................................................	25	1	77.00	77.00
..........................................................................................TGCACGGAGAACTGATAAGGGC.....................................................	22	1	74.00	74.00
..........................................................................................TGGACGCAGAACTGATAAGGGC.....................................................	22	1	73.00	73.00
..........................................................................................TGGACAGAGAACTGATAAGGGC.....................................................	22	1	73.00	73.00
..........................................................................................TGGACGGAGAACTGATACGG.......................................................	20	1	73.00	73.00
..........................................................................................TGGACGGAAAACTGATAAGGGC.....................................................	22	1	72.00	72.00
..........................................................................................TGGACCGAGAACTGATAAGGGC.....................................................	22	1	68.00	68.00
..........................................................................................TGTACGGAGAACTGATAAGGGC.....................................................	22	1	67.00	67.00
..........................................................................................TGGACGGAGAACTGATAAGGCC.....................................................	22	1	66.00	66.00
..........................................................................................TGGACGAAGAACTGATAAGGGC.....................................................	22	1	66.00	66.00
..........................................................................................TGGACGGAGAACTGATAAGGT......................................................	21	1	66.00	66.00
..........................................................................................TGAACGGAGAACTGATAAGGGC.....................................................	22	1	65.00	65.00
..........................................................................................TGCACGGAGAACTGATAAGGG......................................................	21	1	52.00	52.00
..........................................................................................TGGACCGAGAACTGATAAGGG......................................................	21	1	51.00	51.00
..........................................................................................TGGACGGATAACTGATAAGGG......................................................	21	1	49.00	49.00
..........................................................................................TGGACGGAGAACTGATAAGGGCTTTT.................................................	26	1	46.00	46.00
..........................................................................................TGGACGGAGAACTGATAAGGA......................................................	21	1	44.00	44.00
..........................................................................................TGTACGGAGAACTGATAAGGG......................................................	21	1	42.00	42.00
..........................................................................................TGGACGGAGAACTGATAGGG.......................................................	20	1	42.00	42.00
..........................................................................................TGGACTGAGAACTGATAAGGGC.....................................................	22	1	42.00	42.00
..........................................................................................TGGACGCAGAACTGATAAGGG......................................................	21	1	41.00	41.00
..........................................................................................TGGACGAAGAACTGATAAGGG......................................................	21	1	40.00	40.00
..........................................................................................TGGCCGGAGAACTGATAAGGGC.....................................................	22	1	40.00	40.00
..........................................................................................TGGACGGAGAACTGATATGG.......................................................	20	1	40.00	40.00
..........................................................................................TGGACGGAGAACTGATAAGGGTT....................................................	23	1	39.00	39.00
..........................................................................................TGGACGGAGAACTGATAACGGC.....................................................	22	1	37.00	37.00
..........................................................................................TGGACGGAAAACTGATAAGGG......................................................	21	1	37.00	37.00
..........................................................................................TGGACGGAGAAATGATAAGGGC.....................................................	22	1	34.00	34.00
..........................................................................................TGGACGGAGAACTGATAAGGGCC....................................................	23	1	33.00	33.00
..........................................................................................TCGACGGAGAACTGATAAGGGC.....................................................	22	1	32.00	32.00
..........................................................................................TGAACGGAGAACTGATAAGGG......................................................	21	1	31.00	31.00
..........................................................................................TGGACAGAGAACTGATAAGGG......................................................	21	1	31.00	31.00
..........................................................................................TGGACGGAGAACTGATAAGGGCAT...................................................	24	1	30.00	30.00
..........................................................................................TGGACGGAGAACTGACAAGGGC.....................................................	22	1	30.00	30.00
..........................................................................................TGGACGGAGAACTGATAAGGTC.....................................................	22	1	30.00	30.00
..........................................................................................TGGACGGAGAACTGATAAGCG......................................................	21	1	29.00	29.00
..........................................................................................TGGACGTAGAACTGATAAGGGC.....................................................	22	1	28.00	28.00
.........................................................................................CTGGACGGAGAACTGATAAGGGC.....................................................	23	1	28.00	28.00
..........................................................................................TGGACTGAGAACTGATAAGGG......................................................	21	1	28.00	28.00
..........................................................................................TGGATGGAGAACTGATAAGGGC.....................................................	22	1	27.00	27.00
..........................................................................................TGGACGGAGAACTGATAAAGGC.....................................................	22	1	26.00	26.00
..........................................................................................TGGAAGGAGAACTGATAAGGGC.....................................................	22	1	26.00	26.00
..........................................................................................TGGACGGAGAACTGATAACGG......................................................	21	1	25.00	25.00
..........................................................................................TGGACGGAGAAATGATAAGGG......................................................	21	1	25.00	25.00
..........................................................................................TGGACGGAGAACTGATAAGCGC.....................................................	22	1	25.00	25.00
...........................................................................................TGACGGAGAACTGATAAGGGC.....................................................	21	1	25.00	25.00
..........................................................................................TGGACGGAGAACTGATAAGGC......................................................	21	1	25.00	25.00
..........................................................................................TGGACGGAGAACTGCTAAGGGC.....................................................	22	1	24.00	24.00
..........................................................................................TGGACGGCGAACTGATAAGGGC.....................................................	22	1	24.00	24.00
.........................................................................................CTGGACGGAGAACTGATAAGGG......................................................	22	1	24.00	24.00
..........................................................................................TTGACGGAGAACTGATAAGGGC.....................................................	22	1	24.00	24.00
..........................................................................................TGGACGGCGAACTGATAAGGG......................................................	21	1	23.00	23.00
..........................................................................................TGGACGGAGCACTGATAAGGG......................................................	21	1	23.00	23.00
..........................................................................................TGGACGGAGAACTGATAATGGC.....................................................	22	1	23.00	23.00
...................................................CCTTATCATTCTCTCGCCCCGT............................................................................................	22	1	23.00	23.00
..........................................................................................TGGACGGAGCACTGATAAGGGC.....................................................	22	1	23.00	23.00
..........................................................................................TGGACGGAGAACTGATACGGGCT....................................................	23	1	22.00	22.00
..........................................................................................TGGACGGAGGACTGATAAGGGC.....................................................	22	1	22.00	22.00
..........................................................................................TGGACGGAGAACTGACAAGGG......................................................	21	1	22.00	22.00
..........................................................................................TGGACGGGGAACTGATAAGGGC.....................................................	22	1	21.00	21.00
..........................................................................................TGGACGGAGAACTGATAAGGAC.....................................................	22	1	21.00	21.00
..........................................................................................TGGACGGAGAACTGATAAGAGC.....................................................	22	1	20.00	20.00
..........................................................................................TGGACGGAGAACCGATAAGGGC.....................................................	22	1	20.00	20.00
..........................................................................................TGGACGGAGAACTGCTAAGGG......................................................	21	1	20.00	20.00
..........................................................................................TGGAAGGAGAACTGATAAGGG......................................................	21	1	19.00	19.00
..........................................................................................TGGACGAAGAACTGATAAGG.......................................................	20	1	19.00	19.00
..........................................................................................TGGGCGGAGAACTGATAAGGGC.....................................................	22	1	19.00	19.00
..........................................................................................TGGACGGATAACTGATAAGG.......................................................	20	1	18.00	18.00
..........................................................................................TGGACGGAGAACTGATAAGGGTTT...................................................	24	1	18.00	18.00
..........................................................................................CGGACGGAGAACTGATAAGGGC.....................................................	22	1	18.00	18.00
..........................................................................................TGGACGGAGAACTCATAAGGGC.....................................................	22	1	17.00	17.00
..........................................................................................TGGACGGAGAGCTGATAAGGGC.....................................................	22	1	17.00	17.00
..........................................................................................TGGACGGGGAACTGATAAGGG......................................................	21	1	17.00	17.00
..........................................................................................TGGACGGAGAACTGATCAGGG......................................................	21	1	16.00	16.00
..........................................................................................TGGACGGAGAACTGGTAAGGG......................................................	21	1	16.00	16.00
..........................................................................................TGGACGGAGAACTGGTAAGGGC.....................................................	22	1	16.00	16.00
..........................................................................................TGGACGGAGAGCTGATAAGGG......................................................	21	1	16.00	16.00
..........................................................................................TGCACGGAGAACTGATAAGG.......................................................	20	1	16.00	16.00
..........................................................................................TGAACGGAGAACTGATAAGG.......................................................	20	1	15.00	15.00
...........................................................................................TGACGGAGAACTGATAAGGG......................................................	20	1	15.00	15.00
..........................................................................................TGGCCGGAGAACTGATAAGGG......................................................	21	1	15.00	15.00
..........................................................................................TGGACCGAGAACTGATAAGG.......................................................	20	1	15.00	15.00
..........................................................................................TAGACGGAGAACTGATAAGGGC.....................................................	22	1	15.00	15.00

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image