dme-mir-13b-2- 12- and 20-way alignments

dme-mir-13b-2	chrX:8985263-8985332 +	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intron

Legend:

   mature strand at position 8985308-8985330
   star strand at position 8985270-8985293
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chrX:8985248-8985347 +	TCTA---CCTCTGCT---------GTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGG----ATTTGA-CTTCATATCACAGCCATTTTGACGAGTTTGTTG-GACAGCC-A------GCCT
droSim1	chrX_random:2632466-2632565 +	TCTG---CCTCTGCT---------GTCTATCAACGCGTCAAAATGACTGTGAGCTATGTGG----ATTTGA-CTTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCC-A------GCCT
droSec1	super_34:345603-345702 +	CCTG---CCTCTGCT---------GTCTATCAACGCGTCAAAATGACTGTGAGCTATGTGG----ATTTGA-CTTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCC-A------GCCT
droYak2	chrX:12330556-12330651 -	CTTA---CCCCTGCT---------GTCTAGTAACGCGTCAAAATGACTGTGAGCTATGTGG----ATTTGA-CTTCATATCACAGCCATTTTGACGAGTTTGCTG-GCCAGTC-----------T
droEre2	scaffold_4690:6132295-6132393 -	TTTAAACCCCCTGCT---------GTCTATTAGCGCGTCAAAGTGACTGTGAACTATGTGG----ATTTGA-CTTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCC-----------C
droAna3	scaffold_13047:797463-797571 +	CCCG---CTTCTGCTTCATTACCTGTTTCCCAGCGCGTCGAAATGACTGTGACTTATGCGT----ATTTGA-TGTCATATCACAGCCATTTTGACGAGTTTGGTG-GACAGTG-A------AAGT
dp4	chrXL_group1e:7000785-7000885 -	GCTA---CTGCTGCT---------GCACATTTACGCGTCAAAATGACTGTGAGCTATGTGT----TTTTGA-TCTCATATCACAGCCATTTTGACGAGTTTGATG-TGCAGTCCC------ACTC
droPer1	super_13:1553253-1553353 +	GCTA---CTGCTGCT---------GCACATTTACGCGTCAAAATGACTGTGAGCTATGTGT----TTTTGA-TCTCATATCACAGCCATTTTGACGAGTTTGATG-TGCAGTCCC------ACTC
droWil1	scaffold_180777:2053070-2053171 +	CTTA---CAACTGAT---------GTCCATGGTCGCGTCAAAATGACTGTGAGCTATGTTAACCGGTCAGAAATTCATATCACAGCCATTTTGACGAGTTCGATG-GGCATAC----------GA
droVir3	scaffold_12970:9304321-9304422 +	GCTG---CCAATGCT---------CCATATTGGCGCGTCAAAATGACTGTGAGCTATGTTGTTGCATTTGCCATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCC-----------A
droMoj3	scaffold_6473:13342543-13342650 -	TCCT---CTAATGCT---------CCATATTTGCGCGTCAAATTGACTGTGAGCTATGTTT----ATGAGATTATCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCC-ACCAACTGCAA
droGri2	scaffold_15203:307003-307104 +	GCTA---TCAGTGCT---------CCATATTGGCGCGTCAAATTGACTGTGAGCTATGTTGTTGCAGTTGTAATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCC-----------A

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chrX:8985248-8985347 +	NA	TCTACC-TC--------------TGCTGTCTATT------------AACGCGTCAAAATGACTGTGAGCTATGTG----GATT-TGA-C-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GACAGCCAGC-CT
droSim1	chrX_random:2632466-2632565 +	5	TCTGCC-TC--------------TGCTGTCTATC------------AACGCGTCAAAATGACTGTGAGCTATGTG----GATT-TGA-C-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCCAGC-CT
droSec1	super_34:345603-345702 +	5	CCTGCC-TC--------------TGCTGTCTATC------------AACGCGTCAAAATGACTGTGAGCTATGTG----GATT-TGA-C-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCCAGC-CT
droYak2	chrX:12330556-12330651 -	16	CTTACC-CC--------------TGCTGTCTAGT------------AACGCGTCAAAATGACTGTGAGCTATGTG----GATT-TGA-C-TTCATATCACAGCCATTTTGACGAGTTTGCTG-GCCAGTC-----T
droEre2	scaffold_4690:6132295-6132393 -	11	TTTAAA-CCCCC-----------TGCTGTCTATT------------AGCGCGTCAAAGTGACTGTGAACTATGTG----GATT-TGA-C-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCC-----C
droEug1	scf7180000409631:397666-397764 +	2	CTTACC-TT--------------TGCTGTCTATT------------AACGCGTTAAAATGACTGTGAGCTATGTT----GATT-TGA-C-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGGCAC--AT
droBia1	scf7180000301760:4584588-4584685 +	4	T--ACT-TC--------------TGCTGTCTATC------------AGCGCGTCAAAATGACTGTGAGCTATGTG----CATT-TAA-C-CTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCATGCGC--AT
droTak1	scf7180000415169:933669-933769 -	15	TTTATACCC--------------TGCTGTCTATT------------AACGCGTCAAAATGACTGTGAGCTATGTG----GATT-TGA-C-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GCCAGTCGCA-TT
droEle1	scf7180000491006:2500520-2500618 +	4	TCTGCT-AC--------------TGCTGTCTATT------------AACGCGTCAAAATGACTGTGAACTATGTG----GATT-TGA-C-TTCATATCACAGCCATTTTGACGAGTTTGGTG-GGCAGGCAC--AT
droRho1	scf7180000779841:510723-510818 +	2	TTCAGC-TT--------------TGCTGTCTATT------------AACGCGTCAAAATGACTGTGAGCTATGTG----GATT-TGA-C-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGGCA-----
droFic1	scf7180000453829:954200-954296 +	3	TCCATCATC--------------TGCTGTCTTTC------------AAAGCGTCAAGATGACTGTGAGCTATGTG----GATT-TGA-C-TTCATATCACAGCCATTTTGACGAGTTTGGCG-GACAGCC-----T
droKik1	scf7180000301542:45346-45455 +	1	TCTCCT-CCACC----TGTGCTTTGCTGTCTATC------------AACGCGTCAAAATGACTGTGAGCTATGTT----GAATTTGA-C-TTCATATCACAGCCATTTTGACGAGTTTGATG-GACAGACTC--AT
droAna3	scaffold_13047:797460-797571 +	2	TGTCCC-GCTTC-----------TGC---TTCATTACCTGTTTCCCAGCGCGTCGAAATGACTGTGACTTATGCG----TATT-TGA-T-GTCATATCACAGCCATTTTGACGAGTTTGGTG-GACAGTGAAA-GT
droBip1	scf7180000396431:582372-582471 +	1	GCTAAT-CT--------------TGCTGTTTCCC------------AACGCGTCGAAATGACTGTGACTTATGCG----TATT-TGA-T-GCCATATCACAGCCATTTTGACGAGTTTGGTG-GACAGTCATA-AC
dp4	chrXL_group1e:7000785-7000885 -	11	GCTACT-GC--------------TGCTGCACATT------------TACGCGTCAAAATGACTGTGAGCTATGTG----TTTT-TGA-T-CTCATATCACAGCCATTTTGACGAGTTTGATG-TGCAGTCCCACTC
droPer1	super_13:1553253-1553353 +	6	GCTACT-GC--------------TGCTGCACATT------------TACGCGTCAAAATGACTGTGAGCTATGTG----TTTT-TGA-T-CTCATATCACAGCCATTTTGACGAGTTTGATG-TGCAGTCCCACTC
droWil1	scaffold_181089:4662176-4662263 -	8	TTTTCC-TA--------------TGCTGGCTTTG-A----------GATGGCCCCCAAAGCCTATGAGAAGTGCA----AGAT-TGC-C-TTGCTCAACA--TT--------GAATTGG----AGCTGAAGGC-AG
droVir3	scaffold_12970:9304312-9304422 +	4	TCTCTC-GCTGCTGCCAA-----TGCTCCATATT------------GGCGCGTCAAAATGACTGTGAGCTATGTTGTTGCATT-TGC-CATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCCA-----
droMoj3	scaffold_6473:13342549-13342650 -	17	TCCTCT-AA--------------TGCTCCATATT------------TGCGCGTCAAATTGACTGTGAGCTATGTT----TATG-AGATT-ATCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCCACC-AA
droGri2	scaffold_15203:306998-307104 +	1	TCGTTG-CTATC----AG-----TGCTCCATATT------------GGCGCGTCAAATTGACTGTGAGCTATGTTGTTGCAGT-TGT-AATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCCA-----

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

TCTA---CCTCTGCT---------GTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGG----ATTTGA-CTTCATATCACAGCCATTTTGACGAGTTTGTTG-GACAGCC-A------GCCT

Size

Hit Count

Total Norm

droSim1

TCTG---CCTCTGCT---------GTCTATCAACGCGTCAAAATGACTGTGAGCTATGTGG----ATTTGA-CTTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCC-A------GCCT	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
.............................................................................TATCACAGCCATTTTGACGAGT..........................	22	5	9791.00	8331.60	960.20	102.00	397.20
.............................................................................TATCACAGCCATTTTGACGAGTT.........................	23	5	3518.20	2829.40	343.20	113.40	232.20
.............................................................................TATCACAGCCATTTTGACGAG...........................	21	5	1500.60	603.00	714.20	79.20	104.20
.............................................................................TATCACAGCCATTTTGATGAGTT.........................	23	5	1024.00	970.80	32.00	0.40	20.80
.............................................................................TATCACAGCCATTTTGACG.............................	19	5	378.60	1.60	350.40	18.40	8.20
.............................................................................TATCACAGCCATTTTGACGAGTTA........................	24	5	260.40	232.40	2.00	1.00	25.00
.............................................................................TATCACAGCCATTTTGATGAGT..........................	22	5	180.60	134.60	39.80	1.20	5.00
.............................................................................TATCACAGCCATTTTGACGAGG..........................	22	5	145.20	25.20	68.00	10.20	41.80
.............................................................................TATCACAGCCATTTTGACGAGTTAA.......................	25	3	217.33	169.00	1.00	0.00	47.33
.............................................................................TATCACAGCCCTTTTGACGAGT..........................	22	5	98.00	97.80	0.20	0.00	0.00
.................................................................................ACAGCCATTTTGACGAGT..........................	18	5	85.80	78.40	6.40	0.40	0.60
.............................................................................TATCACAGCCATTTTGACGAGC..........................	22	5	82.00	13.60	52.60	5.20	10.60
.............................................................................TATCACAGCCATTTTGACGA............................	20	5	72.40	19.20	47.00	3.40	2.80
.............................................................................TATCACAGCCATTTTGATGAG...........................	21	5	69.40	8.60	58.20	0.80	1.80
.............................................................................TATCACAGCCATTTTGACGAGTTT........................	24	5	53.40	43.40	6.40	2.80	0.80
.............................................................................TATCACAGACATTTTGACGAGT..........................	22	5	47.20	46.60	0.60	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGCGT..........................	22	5	40.40	40.40	0.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGAC...........................	21	5	39.20	0.00	33.40	2.60	3.20
.............................................................................TATCACAGCCATTTTGACGAGTTG........................	24	5	32.80	9.40	10.40	0.60	12.40
.............................................................................TATCACAGCCCTTTTGACGAGTT.........................	23	5	30.80	30.20	0.20	0.20	0.20
.................................................................................ACAGCCATTTTGACGAGTT.........................	19	5	27.00	20.00	1.60	1.60	3.80
.............................................................................TATCACAGCCATTTTGATG.............................	19	5	22.20	0.20	21.40	0.60	0.00
.............................................................................TATCACAGACATTTTGACGAGTT.........................	23	5	20.80	20.80	0.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGAC..............................	18	5	19.00	0.00	15.40	1.80	1.80
.............................................................................TATCACAGCCATTTTGACGCGTT.........................	23	5	19.00	18.80	0.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGA..........................	22	5	18.60	7.00	9.60	2.00	0.00
.............................................................................TATCACAGCCATTTTGCCGAGT..........................	22	5	18.20	18.20	0.00	0.00	0.00
..................................GCGTCAAAATGACTGTGAGCT......................................................................	21	2	45.00	1.00	27.50	7.00	9.50
.............................................................................TATCACAGCCATTTTGACTAG...........................	21	5	17.60	2.60	12.80	0.40	1.80
.............................................................................TATCACAGCCATTTTGGCGAGT..........................	22	5	16.00	15.20	0.60	0.20	0.00
.............................................................................TATCACAGCCATTTTGTCGAGT..........................	22	5	15.80	15.40	0.20	0.20	0.00
.............................................................................TAGCACAGCCATTTTGACGAGT..........................	22	5	15.40	15.20	0.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGAAGAGT..........................	22	5	15.40	15.40	0.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGTGT..........................	22	5	14.80	14.60	0.00	0.20	0.00
.............................................................................TATCACAGCCATTTTTACGAGT..........................	22	5	14.20	12.80	1.20	0.20	0.00
.............................................................................TATCACAGCCATTTTGACGAGGT.........................	23	5	14.00	14.00	0.00	0.00	0.00
............................................................................CTATCACAGCCATTTTGACGAGT..........................	23	5	13.20	13.20	0.00	0.00	0.00
.............................................................................TATCAAAGCCATTTTGACGAGT..........................	22	5	13.20	13.20	0.00	0.00	0.00
.............................................................................TATCACAGCCAGTTTGACGAGT..........................	22	5	13.20	13.20	0.00	0.00	0.00
.............................................................................TATCACAGCCGTTTTGACGAGT..........................	22	5	13.00	12.60	0.40	0.00	0.00
................................ACGCGTCAAAATGACTGTGAGCT......................................................................	23	2	31.00	0.00	4.00	0.00	27.00
..................................GCGTCAAAATGACTGTGAGCTATG...................................................................	24	2	30.50	19.50	4.50	1.50	5.00
.............................................................................TATCACAGCCATTTTGACGAGCT.........................	23	5	11.80	11.20	0.40	0.00	0.20
.............................................................................TATCACAGCCATTTTGACGAGTC.........................	23	5	11.80	4.60	3.80	1.80	1.60
.............................................................................TATAACAGCCATTTTGACGAGT..........................	22	5	11.80	11.80	0.00	0.00	0.00
.............................................................................TATCGCAGCCATTTTGACGAGT..........................	22	5	11.40	9.60	1.20	0.20	0.40
.............................................................................TATCACAGCCATTTTGCCGAGTT.........................	23	5	10.80	10.80	0.00	0.00	0.00
.............................................................................TATCACGGCCATTTTGACGAGT..........................	22	5	10.20	8.40	1.80	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGGGT..........................	22	5	10.00	9.40	0.40	0.00	0.20
.............................................................................TATCACAGTCATTTTGACGAGT..........................	22	5	9.40	9.20	0.20	0.00	0.00
.............................................................................TATCACAGCTATTTTGACGAGT..........................	22	5	9.20	7.60	1.60	0.00	0.00
.............................................................................TATCACAGCCACTTTGACGAGT..........................	22	5	9.20	9.20	0.00	0.00	0.00
.............................................................................TACCACAGCCATTTTGACGAGT..........................	22	5	9.20	8.20	0.80	0.00	0.20
.............................................................................TATCACAGCCATTTTGACTAGT..........................	22	5	9.00	6.20	2.00	0.20	0.60
.............................................................................CATCACAGCCATTTTGACGAGT..........................	22	5	9.00	8.60	0.20	0.00	0.20
.............................................................................TATCACAGCCATTTCGACGAGT..........................	22	5	8.60	8.20	0.20	0.20	0.00
.............................................................................TATCACAGCCATTTTGACGAGTA.........................	23	5	8.60	6.60	1.00	0.40	0.60
.................................................................................ACAGCCATTTTGATGAGTT.........................	19	5	8.20	6.60	1.20	0.00	0.40
.............................................................................TATCACAGCCATTTTGACGG............................	20	5	8.00	0.00	6.80	0.60	0.60
.............................................................................TATCACAGCCATTTTGATGAGCT.........................	23	5	7.80	7.80	0.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGTTTG.......................	25	3	13.00	8.67	1.00	0.00	3.33
.............................................................................TATCACAGCCATTTTGACGTGTT.........................	23	5	7.60	7.60	0.00	0.00	0.00
.............................................................................TATCACAGCCCTTTTGACGAG...........................	21	5	7.40	7.40	0.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGACCAGT..........................	22	5	7.00	4.00	1.20	0.00	1.80
.............................................................................TATTACAGCCATTTTGACGAGT..........................	22	5	6.80	6.20	0.40	0.00	0.20
.............................................................................TAACACAGCCATTTTGACGAGT..........................	22	5	6.60	6.40	0.00	0.00	0.20
.............................................................................TATCACAGACATTTTGATGAGTT.........................	23	5	6.60	6.60	0.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGGCGAGTT.........................	23	5	6.60	5.80	0.40	0.00	0.40
.............................................................................TATCACAGCCATCTTGACGAGT..........................	22	5	6.40	5.80	0.60	0.00	0.00
.............................................................................TATCACATCCATTTTGACGAGT..........................	22	5	6.40	4.00	1.60	0.20	0.60
.............................................................................TATCACAGCCATTTTGCTGAGTT.........................	23	5	6.40	6.40	0.00	0.00	0.00
.............................................................................TATCACAGCAATTTTGACGAGT..........................	22	5	6.20	6.20	0.00	0.00	0.00
............................................................................CTATCACAGCCATTTTGACGAGTT.........................	24	5	6.20	6.00	0.20	0.00	0.00
.............................................................................TATCACAGCCATTCTGACGAGT..........................	22	5	6.20	6.20	0.00	0.00	0.00
.............................................................................TATCACAGCCCTTTTGCCGAGT..........................	22	3	10.33	10.33	0.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGACAAGT..........................	22	5	6.00	5.40	0.20	0.00	0.40
..............................................................................ATCACAGCCATTTTGACGAGTT.........................	22	5	6.00	5.20	0.40	0.00	0.40
.............................................................................GATCACAGCCATTTTGACGAGT..........................	22	5	6.00	5.60	0.20	0.00	0.20
.............................................................................TATCACAGCCAGTTTGACGAGG..........................	22	3	10.00	10.00	0.00	0.00	0.00
.............................................................................TATCACAGCCCTTTTGATGAGTT.........................	23	5	6.00	6.00	0.00	0.00	0.00
.............................................................................TATCATAGCCATTTTGACGAGT..........................	22	5	6.00	5.20	0.40	0.00	0.40
.............................................................................TATCACAGCCTTTTTGACGAGT..........................	22	5	5.80	5.80	0.00	0.00	0.00
.............................................................................TATCCCAGCCATTTTGACGAGT..........................	22	5	5.80	5.40	0.20	0.00	0.20
.............................................................................TGTCACAGCCATTTTGACGAGT..........................	22	5	5.80	4.80	0.40	0.20	0.40
.............................................................................TATCACAGCCCTTTTGACGCGT..........................	22	3	9.33	9.33	0.00	0.00	0.00
.............................................................................TACCACAGCCATTTTGACGAGTT.........................	23	5	5.40	4.40	0.60	0.00	0.40
.............................................................................TATCACAGCCATTTTCACGAGT..........................	22	5	5.40	3.60	1.00	0.00	0.80
.............................................................................TATCACAGCCATTTTGACTAGTT.........................	23	5	5.40	2.80	1.20	0.00	1.40
.............................................................................TATCACAGTCATTTTGACGAGTT.........................	23	5	5.40	5.20	0.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGTCGAGTT.........................	23	5	5.20	5.00	0.00	0.00	0.20
.............................................................................TATCACAGCCATTTTGACGAGTAA........................	24	3	8.67	6.67	0.33	0.33	1.33
.............................................................................TATCACAGCCATTTTAACGAGT..........................	22	5	5.20	4.60	0.60	0.00	0.00
.............................................................................TATCACAGCCATGTTGACGAGT..........................	22	5	5.20	5.20	0.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGATGA............................	20	5	5.20	0.00	5.20	0.00	0.00
.............................................................................TATCACAGACATTTTGACGAG...........................	21	5	5.00	4.80	0.20	0.00	0.00
.............................................................................TATCAAAGCCATTTTGACGAGTT.........................	23	5	5.00	4.80	0.00	0.00	0.20
.............................................................................TATCACAGCCATTTTGAAGAGTT.........................	23	5	4.80	4.60	0.00	0.20	0.00
.............................................................................TATCACAGGCATTTTGACGAGT..........................	22	5	4.60	4.40	0.20	0.00	0.00
.............................................................................TCTCACAGCCATTTTGACGAGT..........................	22	5	4.60	4.60	0.00	0.00	0.00
.............................................................................TATCACAGCCGTTTTGACGAGTT.........................	23	5	4.60	4.40	0.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGTTC........................	24	5	4.60	3.60	0.40	0.00	0.60

droSec1

CCTG---CCTCTGCT---------GTCTATCAACGCGTCAAAATGACTGTGAGCTATGTGG----ATTTGA-CTTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCC-A------GCCT	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
.............................................................................TATCACAGCCATTTTGACGAGT..........................	22	5	50237.00	5085.20	14813.60	30338.20
.............................................................................TATCACAGCCATTTTGACGAGTT.........................	23	5	21215.40	6137.20	8072.40	7005.80
.............................................................................TATCACAGCCATTTTGATGAGTT.........................	23	5	9084.40	109.20	6701.40	2273.80
.............................................................................TATCACAGCCATTTTGACGAG...........................	21	5	2628.20	140.40	264.00	2223.80
.............................................................................TATCACAGCCATTTTGATGAGT..........................	22	5	1218.00	20.80	288.60	908.60
.............................................................................TATCACAGCCATTTTGACGAGTTT........................	24	5	1172.20	632.00	102.20	438.00
.............................................................................TATCACAGCCATTTTGACGAGTTA........................	24	5	956.40	84.20	773.20	99.00
.............................................................................TATCACAGCCATTTTGACGAGTTAA.......................	25	3	701.33	31.00	623.00	47.33
.................................................................................ACAGCCATTTTGACGAGT..........................	18	5	272.60	3.00	102.40	167.20
.............................................................................TATCACAGCCATTTTGACGA............................	20	5	194.00	5.60	11.20	177.20
..................................GCGTCAAAATGACTGTGAGCTATG...................................................................	24	2	376.00	82.00	252.50	41.50
.............................................................................TATCACAGCCATTTTGACGAGA..........................	22	5	124.60	12.80	6.80	105.00
.............................................................................TATCACAGCCAxTTTGACGAGT..........................	21	5	121.20	5.00	85.80	30.40
.............................................................................TATCACAGCCATTTTGATGAG...........................	21	5	108.00	2.80	9.60	95.60
.............................................................................TATCACAGCCATTTTGACTAGT..........................	22	5	105.60	30.20	18.40	57.00
.............................................................................TATCACAGCCATTTTGACAAGT..........................	22	5	104.00	34.40	10.80	58.80
.............................................................................TATCACAGCCATTTTGACGAGC..........................	22	5	89.20	10.00	28.00	51.20
.............................................................................TATCACAGCCATTTTGACCAGT..........................	22	5	77.20	41.60	6.80	28.80
.................................................................................ACAGCCATTTTGACGAGTT.........................	19	5	76.80	3.00	41.40	32.40
.............................................................................TATTACAGCCATTTTGACGAGT..........................	22	5	67.80	2.20	54.40	11.20
.............................................................................TATCACACCCATTTTGACGAGT..........................	22	5	66.00	5.60	26.20	34.20
.............................................................................TATCACATCCATTTTGACGAGT..........................	22	5	65.60	6.80	12.40	46.40
.............................................................................TATCACAGCCCTTTTGACGAGT..........................	22	5	63.80	10.60	10.40	42.80
.............................................................................TATCACAGCCATTTTGACGAGTA.........................	23	5	62.40	15.00	18.20	29.20
.............................................................................TATCACAGCCATTTTGACAAGTT.........................	23	5	62.00	45.80	5.80	10.40
.............................................................................TATCACAGCCATTTTGACG.............................	19	5	58.80	0.20	1.60	57.00
.................................................................................ACAGCCATTTTGATGAGTT.........................	19	5	58.00	0.00	44.60	13.40
.............................................................................TATCACAACCATTTTGACGAGT..........................	22	5	57.60	3.20	8.60	45.80
.............................................................................TATCACGGCCATTTTGACGAGT..........................	22	5	55.80	4.60	21.40	29.80
.............................................................................TATCGCAGCCATTTTGACGAGT..........................	22	5	54.80	3.40	19.40	32.00
.............................................................................TACCACAGCCATTTTGACGAGT..........................	22	5	54.40	5.00	21.20	28.20
.............................................................................TATCACAGCCATTTTGACCAGTT.........................	23	5	53.40	45.80	2.20	5.40
.............................................................................TATCACAGCAATTTTGACGAGT..........................	22	5	52.00	0.60	7.60	43.80
............................................................................CTATCACAGCCATTTTGACGAGT..........................	23	5	51.40	1.40	16.40	33.60
.............................................................................TATCATAGCCATTTTGACGAGT..........................	22	5	51.20	2.20	32.20	16.80
.............................................................................TATCACAGCTATTTTGACGAGT..........................	22	5	51.00	2.20	34.40	14.40
.............................................................................TATCACAGCCAxTTTGACGAGTT.........................	22	5	47.80	4.80	36.60	6.40
.............................................................................TATCACAGCCATTTCGACGAGT..........................	22	5	46.20	6.20	18.80	21.20
.............................................................................TATCACAGCCATTTTGGCGAGT..........................	22	5	46.00	4.60	15.00	26.40
.............................................................................TATTACAGCCATTTTGACGAGTT.........................	23	5	45.00	2.40	38.80	3.80
.............................................................................TATCACAGCCATTTTGACGGGT..........................	22	5	44.40	4.60	19.80	20.00
.............................................................................TATCACAGCCATCTTGACGAGT..........................	22	5	43.20	4.00	17.20	22.00
...............................................................................TATCAGCCATTTTGACGAGT..........................	20	3	71.33	4.33	47.33	19.67
.............................................................................CATCACAGCCATTTTGACGAGT..........................	22	5	42.20	5.20	12.20	24.80
.............................................................................TATCACAGCCAxxTTGACGAGT..........................	20	3	70.33	4.33	49.33	16.67
.............................................................................TATCACAGCTATTTTGACGAGTT.........................	23	5	41.80	1.80	36.60	3.40
.............................................................................TATCACAGCCACTTTGACGAGT..........................	22	5	41.00	6.40	18.00	16.60
.............................................................................TATCACAGCCATTTTGACTAGTT.........................	23	5	38.80	29.20	3.00	6.60
.............................................................................TATCACAGCCATTTTGCCGAGT..........................	22	5	38.20	4.20	12.60	21.40
.............................................................................TATCACAGCCGTTTTGACGAGT..........................	22	5	38.00	3.60	14.40	20.00
.............................................................................TATCAAAGCCATTTTGACGAGT..........................	22	5	37.00	0.60	1.20	35.20
.............................................................................TATCACAGACATTTTGACGAGT..........................	22	5	37.00	2.40	8.20	26.40
.............................................................................TATCACAGTCATTTTGACGAGT..........................	22	5	36.40	2.20	19.00	15.20
.............................................................................TATCACACCCATTTTGACGAGTT.........................	23	5	34.00	7.40	18.60	8.00
.............................................................................TATAACAGCCATTTTGACGAGT..........................	22	5	33.80	1.80	2.60	29.40
..............................................................................ATCACAGCCATTTTGACGAGT..........................	21	5	32.20	3.80	4.40	24.00
.............................................................................TATCACAGCCATTTTGATGAGTTT........................	24	5	32.20	1.60	16.20	14.40
..............................................................................ATCACAGCCATTTTGACGAGTT.........................	22	5	31.80	7.80	13.00	11.00
.............................................................................TATCACAGCCATTTTGACGCGT..........................	22	5	31.60	4.80	7.20	19.60
..................................GCGTCAAAATGACTGTGAGCTAT....................................................................	23	2	78.00	24.50	44.50	9.00
.............................................................................TATCACAGCCATTTTGACGATTT.........................	23	5	30.40	6.20	11.60	12.60
...............................................................................TCACAGCCATTTTGACGAGT..........................	20	5	29.40	0.80	18.00	10.60
.............................................................................TATCACAGCCATTTTCACGAGT..........................	22	5	29.20	3.80	10.00	15.40
.............................................................................TATCACATCCATTTTGACGAGTT.........................	23	5	28.80	8.80	8.80	11.20
.............................................................................TATCACAGCCATTTTTACGAGT..........................	22	5	28.40	2.40	3.80	22.20
.............................................................................TATCACAGCCATTTTGATGAGCT.........................	23	5	28.40	0.00	24.00	4.40
.............................................................................TATCACAGCCATTTTGACGAGTTG........................	24	5	27.20	1.60	10.80	14.80
.............................................................................TATCACAGCCATTTTGCCGAGTT.........................	23	5	27.00	7.80	12.80	6.40
.............................................................................TATCACAGCCAxTTTGATGAGTT.........................	22	5	26.00	0.00	23.40	2.60
.............................................................................AATCACAGCCATTTTGACGAGT..........................	22	5	25.20	0.40	3.00	21.80
.............................................................................TATCACAGCCATTTTGACGAGCT.........................	23	5	25.00	8.80	10.80	5.40
.............................................................................TATCATAGCCATTTTGACGAGTT.........................	23	5	25.00	2.40	19.00	3.60
.............................................................................TATCACAGCCATTTTGACGATT..........................	22	5	24.80	1.00	6.00	17.80
...............................................................................TATCAGCCATTTTGACGAGTT.........................	21	3	40.33	2.33	35.00	3.00
.............................................................................TGTCACAGCCATTTTGACGAGT..........................	22	5	24.00	1.60	9.40	13.00
.............................................................................GATCACAGCCATTTTGACGAGT..........................	22	5	23.80	1.00	7.80	15.00
.............................................................................TATCACAGCCATTTTGAAGAGT..........................	22	5	23.80	1.60	3.20	19.00
.............................................................................TATCACAGCCATTTTGACGAGTAA........................	24	3	39.00	10.67	20.67	7.67
.............................................................................TATCACGGCCATTTTGACGAGTT.........................	23	5	22.80	3.80	12.40	6.60
.............................................................................TATCACAGCCATTTTGACGGGTT.........................	23	5	22.80	4.40	11.60	6.80
............................................................................CTATCACAGCCATTTTGACGAGTT.........................	24	5	22.40	3.60	10.80	8.00
.............................................................................TATTACAGCCATTTTGATGAGTT.........................	23	5	22.40	0.00	21.40	1.00
.............................................................................TATCACGGCCATTTTGATGAGTT.........................	23	5	22.20	0.60	11.80	9.80
.............................................................................TATCACAGCCATTTTGACGACT..........................	22	5	22.00	2.80	5.80	13.40
.............................................................................TACCACAGCCATTTTGACGAGTT.........................	23	5	21.80	7.40	8.60	5.80
.............................................................................TATCACAGCCATTTCGACGAGTT.........................	23	5	21.80	4.80	12.60	4.40
.............................................................................TATCACAGCCATTTTGACGAAT..........................	22	5	21.40	1.40	2.80	17.20
.............................................................................TATCACAGCCATTTTAACGAGT..........................	22	5	21.20	0.80	7.40	13.00
.............................................................................TATCACAGCCCTTTTGACGAGTT.........................	23	5	21.20	7.40	5.60	8.20
.............................................................................TATCACAGCCATTCTGACGAGT..........................	22	5	20.00	2.60	6.40	11.00
.............................................................................TATCACAGCCATTTTGGCGAGTT.........................	23	5	20.00	5.20	8.40	6.40
.............................................................................TATCACAGCCATTTTGACGAGTTTG.......................	25	3	33.00	8.33	15.33	9.33
.............................................................................TATCACAGCCATTTTGACGAGTC.........................	23	5	19.60	6.80	6.20	6.60
.............................................................................TATCACAACCATTTTGACGAGTT.........................	23	5	19.40	3.20	4.60	11.60
.............................................................................TATCACAGCCACTTTGACGAGTT.........................	23	5	19.20	3.80	9.40	6.00
.............................................................................TATCGCAGCCATTTTGACGAGTT.........................	23	5	19.00	4.40	10.20	4.40
.............................................................................CATCACAGCCATTTTGACGAGTT.........................	23	5	18.20	4.60	7.00	6.60
.............................................................................TATCACAGCCATTTTGACGAGTTC........................	24	5	18.00	4.40	5.20	8.40
.............................................................................TATCACTGCCATTTTGACGAGT..........................	22	5	17.00	0.80	9.60	6.60
.............................................................................TATCACAGCCATCTTGACGAGTT.........................	23	5	17.00	3.00	8.80	5.20
.............................................................................TATCCCAGCCATTTTGACGAGT..........................	22	5	16.80	3.20	5.00	8.60

droYak2

CTTA---CCCCTGCT---------GTCTAGTAACGCGTCAAAATGACTGTGAGCTATGTGG----ATTTGA-CTTCATATCACAGCCATTTTGACGAGTTTGCTG-GCCAGTC-----------T	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
.............................................................................TATCACAGCCATTTTGACGAGT..........................	22	5	16011.40	6694.40	2904.20	1324.40	4866.40	222.00
.............................................................................TATCACAGCCATTTTGACGAGTT.........................	23	5	8152.80	2581.00	1263.00	1961.80	2285.40	61.60
.............................................................................TATCACAGCCATTTTGATGAGTT.........................	23	5	3021.80	1324.60	439.80	66.80	1181.80	8.80
.............................................................................TATCACAGCCATTTTGACGAG...........................	21	5	773.20	392.00	77.40	38.00	129.80	136.00
.............................................................................TATCACAGCCATTTTGATGAGT..........................	22	5	548.40	108.20	121.60	15.40	295.40	7.80
.............................................................................TATCACAGCCATTTTGACGAGTTT........................	24	5	320.40	44.80	54.80	123.00	96.40	1.40
.............................................................................TATCACAGCCATTTTGACGAGTTA........................	24	5	214.60	171.60	8.60	15.40	18.60	0.40
.............................................................................TATCACAGCCATTTTGACGCGT..........................	22	5	207.40	41.60	31.20	1.00	133.20	0.40
.............................................................................TATCACAGCCCTTTTGACGAGT..........................	22	5	181.60	66.80	39.00	3.20	72.60	0.00
.................................................................................ACAGCCATTTTGACGAGT..........................	18	5	159.00	67.80	33.60	1.20	56.20	0.20
.............................................................................TATCACAGCCATTTTGACGCGTT.........................	23	5	117.00	22.80	16.60	2.20	75.00	0.40
.............................................................................TATCACAGCCCTTTTGACGAGTT.........................	23	5	87.60	27.40	16.00	6.20	38.00	0.00
.............................................................................TATCACAGCCATTTTGCCGAGT..........................	22	5	81.80	10.80	6.20	0.80	63.80	0.20
.............................................................................TATCACAGCCATTTTGACGAGTTAA.......................	25	3	135.00	123.00	1.33	8.00	2.67	0.00
.............................................................................TATCACAGCCATTTTGACGAGC..........................	22	5	64.00	11.40	5.20	3.60	30.40	13.40
.................................................................................ACAGCCATTTTGACGAGTT.........................	19	5	62.80	25.00	10.40	4.00	23.40	0.00
.............................................................................TATCACAGCCATTTTGACGAGG..........................	22	5	57.80	13.60	5.20	0.80	17.20	21.00
.............................................................................TATCACAGCCATTTTTACGAGT..........................	22	5	51.20	7.40	23.40	0.20	19.80	0.40
.............................................................................TATCACAGCCATTTTGACG.............................	19	5	47.20	1.00	2.60	0.00	2.60	41.00
.............................................................................TAGCACAGCCATTTTGACGAGT..........................	22	5	44.40	5.80	12.20	0.20	26.00	0.20
..................................GCGTCAAAATGACTGTGAGCTATG...................................................................	24	2	109.50	24.50	15.50	35.50	34.00	0.00
.............................................................................TATCACAGCCATTTTGACGTGT..........................	22	5	43.60	8.40	1.80	0.40	33.00	0.00
.............................................................................TATCACAGCCATTTTGACTAGT..........................	22	5	42.00	5.80	14.20	1.60	20.00	0.40
.............................................................................TATCACAGCCGTTTTGACGAGT..........................	22	5	40.80	12.40	6.20	0.60	21.60	0.00
.............................................................................TATCACAGCCATTTTGACGA............................	20	5	40.20	10.00	6.00	4.00	14.60	5.60
.............................................................................TATCACAGCCATTTTGACGATT..........................	22	5	39.00	2.40	9.60	0.00	27.00	0.00
.............................................................................TATCACAGCCATTTTGATGAG...........................	21	5	38.40	3.60	6.00	0.80	14.00	14.00
.............................................................................TATCACAGCCATTTTGCCGAGTT.........................	23	5	38.20	6.20	2.40	2.60	26.80	0.20
.............................................................................TATCACAGCCATTTTGATGAGTTT........................	24	5	37.20	7.00	7.40	2.00	20.80	0.00
.............................................................................TATCACAGCCATTTTGACGAGCT.........................	23	5	35.80	10.60	6.40	3.00	15.80	0.00
.............................................................................TATCACAGACATTTTGACGAGT..........................	22	5	33.60	21.60	3.40	0.80	7.80	0.00
.................................................................................ACAGCCATTTTGATGAGTT.........................	19	5	30.80	11.60	6.40	0.60	11.80	0.40
.............................................................................TATCACAGCCATTTTGCTGAGTT.........................	23	5	30.40	6.00	3.60	0.00	20.80	0.00
.............................................................................TATCACAGCCATTTTGACGTGTT.........................	23	5	29.20	4.80	0.80	0.20	23.40	0.00
.............................................................................TATCACAGCCATTTTGATGCGTT.........................	23	5	27.60	5.60	2.40	0.00	19.60	0.00
.............................................................................TATCACAGCCAGTTTGACGAGT..........................	22	5	27.60	9.20	4.00	0.20	14.20	0.00
.............................................................................TATCACAGCCATTTTGGCGAGT..........................	22	5	26.80	12.80	3.40	0.80	9.60	0.20
.............................................................................TATCACAGCCATTTTTACGAGTT.........................	23	5	26.20	2.40	10.40	0.40	13.00	0.00
.............................................................................TATCACAGCCATTTTGTCGAGT..........................	22	5	25.20	6.80	2.60	0.00	15.80	0.00
.............................................................................TATCACAGCCATTTTGACGAGA..........................	22	5	25.00	5.80	5.20	2.20	10.60	1.20
.............................................................................TATCACAGCCATTTTGACGGGT..........................	22	5	23.20	7.60	3.60	1.20	10.80	0.00
.............................................................................TATCACAGCCATTTTGACGAGTA.........................	23	5	22.80	7.80	6.40	3.60	4.60	0.40
.............................................................................TATCACAGCCCTTTTGATGAGTT.........................	23	5	22.00	9.00	2.20	0.00	10.80	0.00
.............................................................................TATCACAGCCCTTTTGACGCGT..........................	22	3	35.67	6.00	4.33	0.00	25.33	0.00
.............................................................................TAGCACAGCCATTTTGACGAGTT.........................	23	5	21.40	2.20	5.20	0.00	14.00	0.00
.............................................................................TATCACAGCCATTTTGACTAGTT.........................	23	5	20.80	1.60	6.20	0.60	11.80	0.60
.............................................................................TATCACAGCCATTTTAACGAGT..........................	22	5	20.80	4.80	7.00	0.60	8.40	0.00
.............................................................................TATCACGGCCATTTTGACGAGT..........................	22	5	20.60	8.40	3.60	0.40	8.00	0.20
.............................................................................TATCACAGCCATTTTGACGATTT.........................	23	5	20.60	1.20	4.60	2.00	12.80	0.00
.............................................................................TATCACAGCCACTTTGACGAGT..........................	22	5	20.40	8.80	4.60	0.60	6.40	0.00
............................................................................CTATCACAGCCATTTTGACGAGT..........................	23	5	20.00	10.40	3.80	0.60	5.20	0.00
.............................................................................CATCACAGCCATTTTGACGAGT..........................	22	5	19.60	7.60	4.20	1.40	6.40	0.00
.............................................................................TATCACAGCCGTTTTGACGAGTT.........................	23	5	18.60	5.80	2.00	2.20	8.60	0.00
.............................................................................TATCACAGCCATTTTGACGAGGT.........................	23	5	18.40	8.60	4.80	0.40	4.60	0.00
.............................................................................TATCACAGCCATTTTGATGAGCT.........................	23	5	18.20	8.60	3.20	0.00	6.40	0.00
.............................................................................TATCACAGCCATTTTGACGAGTC.........................	23	5	17.40	3.60	2.20	2.00	8.40	1.20
.............................................................................TATCGCAGCCATTTTGACGAGT..........................	22	5	17.20	5.60	3.80	0.80	7.00	0.00
.............................................................................TATCACAGCCATCTTGACGAGT..........................	22	5	16.20	6.00	3.80	0.40	6.00	0.00
..............................................................................ATCACAGCCATTTTGACGAGTT.........................	22	5	16.00	6.60	1.60	2.20	5.60	0.00
.............................................................................TATCACAGCCATTTTGAAGAGT..........................	22	5	16.00	7.40	3.00	0.60	5.00	0.00
.............................................................................TATCACAGCCATTTTGACAAGT..........................	22	5	15.80	7.00	4.60	0.40	3.60	0.20
.............................................................................TATCACAGACATTTTGACGAGTT.........................	23	5	15.60	10.80	1.60	0.80	2.40	0.00
.............................................................................TGTCACAGCCATTTTGACGAGT..........................	22	5	15.40	6.20	2.80	0.60	5.80	0.00
.............................................................................TATCACAGTCATTTTGACGAGT..........................	22	5	15.00	7.00	2.80	0.00	5.00	0.20
.............................................................................TATCACATCCATTTTGACGAGT..........................	22	5	14.40	1.20	4.40	2.60	6.00	0.20
.............................................................................TATCACAGCCTTTTTGACGAGT..........................	22	5	14.20	4.40	0.80	0.00	9.00	0.00
.............................................................................TATCACAGCCATTTCGACGAGT..........................	22	5	14.20	5.40	3.80	0.80	4.00	0.20
.............................................................................TACCACAGCCATTTTGACGAGT..........................	22	5	14.20	4.80	4.00	0.80	4.40	0.20
.............................................................................TATCACCGCCATTTTGACGAGT..........................	22	5	14.00	2.80	1.80	0.80	8.20	0.40
.............................................................................TATCACAGCCATTTTGCCGCGT..........................	22	3	23.00	2.00	2.67	0.00	18.33	0.00
.............................................................................TATCACAGCCATTTTGATGATTT.........................	23	5	13.60	1.00	1.40	0.40	10.80	0.00
.............................................................................TATCACAGCCATTTTGATTAGTT.........................	23	5	13.60	1.20	6.60	0.00	5.80	0.00
.............................................................................TATCACAGCCATTTTGTCGAGTT.........................	23	5	13.20	3.00	0.80	0.20	9.20	0.00
.............................................................................TATCACAGCCATTTTCACGAGT..........................	22	5	13.20	1.40	3.40	0.00	8.20	0.20
.............................................................................TATCACAGCCATTTTGACGGGTT.........................	23	5	13.00	2.60	3.60	0.80	6.00	0.00
.............................................................................TATCACAGCCATTTTGGCGAGTT.........................	23	5	13.00	4.00	2.00	2.00	4.80	0.20
.............................................................................TATCACAGCCATTTTGACGAGTTG........................	24	5	12.80	4.60	1.40	1.00	3.00	2.80
.............................................................................TATAACAGCCATTTTGACGAGT..........................	22	5	12.20	4.60	1.00	0.60	6.00	0.00
.............................................................................TATCACACCCATTTTGACGAGT..........................	22	5	12.00	2.80	1.20	1.40	6.40	0.20
.............................................................................TATCACAGCCATTTTGACGCG...........................	21	5	11.80	5.20	1.40	0.00	4.80	0.40
.............................................................................TATCACAGCCCTTTTGCCGAGT..........................	22	3	18.33	3.67	2.00	0.00	12.67	0.00
.............................................................................TATCACAGCCCTTTTGACGCGTT.........................	23	3	17.00	5.33	1.00	0.00	10.67	0.00
.............................................................................TATCACAGCTATTTTGACGAGT..........................	22	5	10.20	4.40	2.20	0.20	3.00	0.40
.............................................................................TAGCACAGCCATTTTGATGAGTT.........................	23	5	10.00	1.40	2.60	0.00	6.00	0.00
.............................................................................TATCACAACCATTTTGACGAGT..........................	22	5	9.80	2.80	1.80	0.20	5.00	0.00
............................................................................CTATCACAGCCATTTTGACGAGTT.........................	24	5	9.80	4.00	1.80	0.40	3.60	0.00
.............................................................................TATCACAGCCATTGTGACGAGT..........................	22	5	9.80	2.60	2.20	0.20	4.80	0.00
.............................................................................TATCACAGCCATTTTGACAAGTT.........................	23	5	9.80	3.80	3.80	0.40	1.60	0.20
.............................................................................TACCACAGCCATTTTGACGAGTT.........................	23	5	9.60	3.80	0.80	2.00	3.00	0.00
.............................................................................TATCACAGCCATTTTAACGAGTT.........................	23	5	9.60	3.20	3.20	0.40	2.80	0.00
.............................................................................TATCATAGCCATTTTGACGAGT..........................	22	5	9.40	3.40	1.00	1.20	3.80	0.00
.............................................................................TATTACAGCCATTTTGACGAGT..........................	22	5	9.20	3.80	1.60	0.60	3.20	0.00
.............................................................................TATCAAAGCCATTTTGACGAGT..........................	22	5	9.20	4.40	1.80	0.00	3.00	0.00
.............................................................................TAGCACAGCCGTTTTGACGAGT..........................	22	3	15.33	0.67	7.67	0.00	7.00	0.00
.............................................................................AATCACAGCCATTTTGACGAGT..........................	22	5	9.00	1.60	1.40	0.20	5.60	0.20
.............................................................................TATCACAGCCATTTTGACGAC...........................	21	5	9.00	0.00	0.20	0.20	0.60	8.00
.............................................................................TATCACATCCATTTTGACGAGTT.........................	23	5	9.00	1.20	1.80	1.20	4.80	0.00
.............................................................................TATCACAGCCACTTTGACGAGTT.........................	23	5	8.80	3.20	1.20	0.80	3.60	0.00
.............................................................................TATCACAGACATTTTGATGAGTT.........................	23	5	8.80	7.00	0.80	0.00	1.00	0.00
.............................................................................TATCCCAGCCATTTTGACGAGT..........................	22	5	8.80	3.20	1.40	0.20	4.00	0.00
.............................................................................TATCACAGCCATTTTGATGTGTT.........................	23	5	8.80	2.00	0.20	0.00	6.60	0.00

droEre2

TTTAAACCCCCTGCT---------GTCTATTAGCGCGTCAAAGTGACTGTGAACTATGTGG----ATTTGA-CTTCATATCACAGCCATTTTGACGAGTTTGTTG-GGCAGCC-----------C	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
.............................................................................TATCACAGCCATTTTGACGAGT..........................	22	5	63140.60	3777.40	1550.80	2695.80	55116.60
.............................................................................TATCACAGCCATTTTGACGAGTT.........................	23	5	10733.60	1060.00	550.60	1009.80	8113.20
.............................................................................TATCACAGCCATTTTGATGAGTT.........................	23	5	5501.40	807.20	846.60	370.00	3477.60
.............................................................................TATCACAGCCATTTTGACGAG...........................	21	5	4134.00	225.00	60.40	110.20	3738.40
.............................................................................TATCACAGCCATTTTGATGAGT..........................	22	5	2226.40	111.00	270.00	25.60	1819.80
.............................................................................TATCACATCCATTTTGACGAGT..........................	22	5	705.40	20.00	1.80	15.20	668.40
.............................................................................TATCACAGCCATTTTGACTAGT..........................	22	5	699.60	45.40	10.00	25.00	619.20
.............................................................................TATCACAGCCATTTTGACGAGTTT........................	24	5	625.00	14.20	21.00	79.60	510.20
.............................................................................TATCACAGCAATTTTGACGAGT..........................	22	5	578.80	1.40	1.00	1.40	575.00
.............................................................................TATCACAGCCATTTTTACGAGT..........................	22	5	558.40	63.00	7.40	42.20	445.80
.............................................................................TATCACAGCCATTTTGACGA............................	20	5	294.80	12.20	3.40	4.60	274.60
.............................................................................TATAACAGCCATTTTGACGAGT..........................	22	5	261.20	2.40	1.80	2.20	254.80
.............................................................................TATCACAGACATTTTGACGAGT..........................	22	5	239.60	5.80	1.80	6.00	226.00
.............................................................................TATCACAGCCATTTTGACGAGTTA........................	24	5	199.00	52.80	4.40	86.60	55.20
.............................................................................TATCACAGCCATTTTGATGAG...........................	21	5	194.00	3.80	14.40	1.80	174.00
.................................................................................ACAGCCATTTTGACGAGT..........................	18	5	181.60	38.00	17.20	29.60	96.80
.............................................................................TATCACAGCCATTTTGAAGAGT..........................	22	5	160.20	3.40	0.20	1.60	155.00
.............................................................................TATCACAGCCATTTTGACGAGC..........................	22	5	137.00	12.00	5.00	6.00	114.00
.............................................................................TATCACAGCCATTTTGACGCGT..........................	22	5	126.80	35.00	22.80	28.00	41.00
.............................................................................TATCACAGCCCTTTTGACGAGT..........................	22	5	125.80	32.20	8.40	21.20	64.00
.............................................................................TATCACAGCCATTTTGACGATT..........................	22	5	122.60	20.20	7.80	16.00	78.60
.............................................................................TACCACAGCCATTTTGACGAGT..........................	22	5	116.00	5.20	2.00	5.40	103.40
.............................................................................TATCACAGCCATTTTGACTAGTT.........................	23	5	112.60	13.60	2.80	9.20	87.00
.............................................................................TATCACAGCCATTTTGACGAGA..........................	22	5	112.00	5.20	3.00	6.60	97.20
.............................................................................TATCACAGCCATTTTGACGAGTA.........................	23	5	111.00	2.20	2.60	5.00	101.20
.............................................................................TATCACAGCCATTTTGACGAGTC.........................	23	5	109.20	3.60	1.40	5.20	99.00
.............................................................................TATCACATCCATTTTGACGAGTT.........................	23	5	108.00	5.60	0.60	6.00	95.80
.............................................................................TATCACAGCCATTTTTACGAGTT.........................	23	5	105.80	20.80	3.40	16.00	65.60
.............................................................................TATCACAGCCATTTTGACGAGTTAA.......................	25	3	153.33	27.00	1.00	115.67	9.67
.............................................................................TATCACAGCCATTTTGACAAGT..........................	22	5	91.40	8.60	2.00	5.20	75.60
.............................................................................TATCAAAGCCATTTTGACGAGT..........................	22	5	86.60	1.60	1.40	1.60	82.00
.............................................................................TATCACAGCAATTTTGACGAGTT.........................	23	5	83.40	0.20	0.20	1.00	82.00
.............................................................................TATCACAGCCATTTTGACGAGG..........................	22	5	78.20	18.20	0.80	9.80	49.40
.............................................................................TATCACAGCCATTTTGCCGAGT..........................	22	5	78.00	9.00	10.20	8.80	50.00
.............................................................................TATCACACCCATTTTGACGAGT..........................	22	5	74.00	6.60	0.80	6.80	59.80
.............................................................................TATCACAGCCAxTTTGACGAGT..........................	21	5	73.40	0.60	0.80	0.40	71.60
.............................................................................TATCACAGCCATTTTGATTAGTT.........................	23	5	68.00	18.00	7.20	8.60	34.20
.............................................................................TAACACAGCCATTTTGACGAGT..........................	22	5	67.40	2.20	0.20	1.00	64.00
............................................................................CTATCACAGCCATTTTGACGAGT..........................	23	5	67.20	5.00	2.60	3.80	55.80
.............................................................................TATCACAGCCATTTTGGCGAGT..........................	22	5	65.40	5.20	1.60	5.20	53.40
.............................................................................TATCACAGCCACTTTGACGAGT..........................	22	5	64.60	10.40	1.00	4.60	48.60
.............................................................................TATCGCAGCCATTTTGACGAGT..........................	22	5	63.80	4.60	1.20	3.00	55.00
.............................................................................TATCACAGCCATTTCGACGAGT..........................	22	5	63.00	3.80	2.20	3.60	53.40
.............................................................................TATCACAGCCATCTTGACGAGT..........................	22	5	60.60	3.60	1.20	5.20	50.60
.............................................................................CATCACAGCCATTTTGACGAGT..........................	22	5	58.40	5.20	1.40	3.20	48.60
.............................................................................TATCACAGCCATTTTGACGGGT..........................	22	5	58.00	5.20	2.60	2.40	47.80
.............................................................................TATCACGGCCATTTTGACGAGT..........................	22	5	55.80	3.40	1.80	3.40	47.20
.............................................................................TATCACATCCATTTTGATGAGTT.........................	23	5	54.60	5.20	0.60	2.40	46.40
.............................................................................TATCACAGCCATTTTCACGAGT..........................	22	5	53.20	12.20	1.60	6.00	33.40
.............................................................................TATCACAGCCATTTTGACTAG...........................	21	5	52.20	4.40	1.20	2.20	44.40
.............................................................................TATCACAGCCATTTTGACCAGT..........................	22	5	52.00	9.00	0.40	5.60	37.00
.............................................................................TATCACATCCATTTTGACGAG...........................	21	5	51.00	1.80	0.20	0.80	48.20
..............................................................................ATCACAGCCATTTTGACGAGT..........................	21	5	50.20	1.60	1.20	0.40	47.00
.............................................................................TATCACAGCCATTTTGACGAGTG.........................	23	5	50.00	1.20	0.60	0.40	47.80
.............................................................................TATCACAGCCATTTTGACG.............................	19	5	49.60	0.40	0.80	0.60	47.80
.............................................................................TATCACAGCCGTTTTGACGAGT..........................	22	5	48.40	5.20	3.20	4.20	35.80
.............................................................................TATTACAGCCATTTTGACGAGT..........................	22	5	47.80	3.80	1.20	2.00	40.80
.............................................................................TATCACAACCATTTTGACGAGT..........................	22	5	47.00	6.20	0.60	2.60	37.60
.............................................................................TAGCACAGCCATTTTGACGAGT..........................	22	5	46.80	4.00	3.00	2.80	37.00
.............................................................................TATCACAGCCATTCTGACGAGT..........................	22	5	45.60	6.40	0.60	2.20	36.40
.............................................................................TATGACAGCCATTTTGACGAGT..........................	22	5	43.40	1.00	0.60	0.80	41.00
.............................................................................TATCACAGCCATTTTGACGATTT.........................	23	5	41.80	5.80	3.20	5.80	27.00
.............................................................................TATAACAGCCATTTTGACGAGTT.........................	23	5	41.60	0.80	0.40	0.60	39.80
.............................................................................TATCACAGCCATTTTGATGAGTC.........................	23	5	40.80	0.40	1.60	0.60	38.20
.............................................................................TATCATAGCCATTTTGACGAGT..........................	22	5	40.80	1.40	1.00	1.40	37.00
.............................................................................TATCACAGCAATTTTGACGAG...........................	21	5	40.40	0.40	0.00	0.00	40.00
.............................................................................TATCACAGACATTTTGACGAGTT.........................	23	5	40.40	2.80	0.00	1.40	36.20
.............................................................................TATCACAGCCATTTTAACGAGT..........................	22	5	40.00	6.60	2.00	3.40	28.00
.............................................................................TATCACAGCTATTTTGACGAGT..........................	22	5	40.00	2.20	1.80	1.40	34.60
.................................................................................ACAGCCATTTTGACGAGTT.........................	19	5	39.60	8.20	7.20	9.80	14.40
.............................................................................TATCACAGCCATTTTTACGAG...........................	21	5	39.20	5.80	0.40	2.60	30.40
.............................................................................TATCACAGCCATTTTGATGAGTTT........................	24	5	38.80	1.80	9.40	3.20	24.40
.............................................................................TATCACAGCCATTTTGACGCGTT.........................	23	5	38.00	9.20	9.40	13.60	5.80
.............................................................................TATCACAGCCATTTTGACGACT..........................	22	5	37.20	9.40	0.80	5.80	21.20
.............................................................................TATCACAGTCATTTTGACGAGT..........................	22	5	36.40	3.20	0.80	2.00	30.40
.............................................................................TATCACAGCCATTTTGACGAGTTG........................	24	5	34.80	2.40	1.40	5.80	25.20
.............................................................................TATCACAGCCATTTTTATGAGTT.........................	23	5	33.80	13.00	2.20	5.20	13.40
.............................................................................TATCACAGCCAxxTTGACGAGT..........................	20	3	55.67	0.00	0.33	0.00	55.33
...............................................................................TCACAGCCATTTTGACGAGT..........................	20	5	33.20	3.40	0.20	0.80	28.80
.................................................................................ACAGCCATTTTGATGAGTT.........................	19	5	32.80	8.80	9.40	4.40	10.20
.............................................................................TATCACAGCCATTTTGATGAGTA.........................	23	5	32.40	0.00	0.40	0.00	32.00
.............................................................................TATCACAGCAATTTTGATGAGTT.........................	23	5	32.20	0.60	0.60	0.00	31.00
.............................................................................TGTCACAGCCATTTTGACGAGT..........................	22	5	32.00	3.40	1.00	1.80	25.80
.............................................................................TATCACCGCCATTTTGACGAGT..........................	22	5	31.60	2.80	1.40	3.40	24.00
.............................................................................TATCACAGCCATTTTGACGAAT..........................	22	5	31.00	4.60	1.20	2.40	22.80
.............................................................................TATCACATCCATTTTGATGAGT..........................	22	5	30.80	0.40	0.20	0.00	30.20
.............................................................................TATCACGGCCATTTTGATGAGTT.........................	23	5	29.20	1.40	3.60	0.80	23.40
.............................................................................TATCACAGCCATTTTGATGATTT.........................	23	5	28.60	8.40	6.80	2.80	10.60
.............................................................................TATCACAGCCATTTTGATTAGT..........................	22	5	28.20	3.80	2.20	0.20	22.00
.............................................................................TCTCACAGCCATTTTGACGAGT..........................	22	5	27.80	4.20	0.40	1.00	22.20
.............................................................................GATCACAGCCATTTTGACGAGT..........................	22	5	27.00	6.00	0.40	3.60	17.00
.............................................................................TATCACAGCCATTTTGACGAGCT.........................	23	5	27.00	9.00	1.60	5.20	11.20
.............................................................................TATCACAGCCATTTTGACGTGT..........................	22	5	26.60	6.40	4.60	4.00	11.60
.............................................................................TATCCCAGCCATTTTGACGAGT..........................	22	5	25.80	1.00	0.40	1.00	23.40
.............................................................................TATCACAGCCCTTTTGACGAGTT.........................	23	5	24.80	6.60	2.00	9.20	7.00
.............................................................................TATCACAGCCATTTTGAAGAGTT.........................	23	5	24.80	0.80	0.60	0.40	23.00
...............................................................................TATCAGCCATTTTGACGAGT..........................	20	3	39.33	0.00	0.00	0.00	39.33
.............................................................................TATCACAGCCATTTTGTCGAGT..........................	22	5	21.80	5.20	1.60	1.80	13.20
.............................................................................TATCACAGCCATTTTGACGAGTTC........................	24	5	21.80	0.60	0.60	14.20	6.40
.............................................................................TATCACATCCATTTTTACGAGT..........................	22	3	35.33	3.67	0.00	5.33	26.33
.............................................................................TATCACAGCCATTTTGCCGAGTT.........................	23	5	20.80	3.60	4.40	4.80	8.00

droAna3

CCCG---CTTCTGCTTCATTACCTGTTTCCCAGCGCGTCGAAATGACTGTGACTTATGCGT----ATTTGA-TGTCATATCACAGCCATTTTGACGAGTTTGGTG-GACAGTG-A------AAGT	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
.............................................................................TATCACAGCCATTTTGACGAGT..........................	22	5	71725.20	2006.00	63741.00	4456.60	1521.60
.............................................................................TATCACAGCCATTTTGACGAGTT.........................	23	5	10486.40	2223.40	5679.80	1872.40	710.80
.............................................................................TATCACAGCCATTTTGACGAG...........................	21	5	4639.80	52.40	4355.40	100.80	131.20
.............................................................................TATCACAGCCATTTTGATGAGTT.........................	23	5	3011.20	75.00	1957.60	883.00	95.60
.............................................................................TATCACAGCCATTTTGACGAGTTT........................	24	5	1808.40	510.00	1046.00	230.00	22.40
.............................................................................TATCACAGCCATTTTGATGAGT..........................	22	5	1373.40	20.80	1083.80	250.20	18.60
.............................................................................TATCACATCCATTTTGACGAGT..........................	22	5	1242.20	20.00	1204.60	7.80	9.80
.............................................................................TATCACAGACATTTTGACGAGT..........................	22	5	619.40	12.80	583.40	20.20	3.00
.............................................................................TAGCACAGCCATTTTGACGAGT..........................	22	5	531.60	0.00	497.00	31.80	2.80
.............................................................................TATCACAGCCATTTTGACTAGT..........................	22	5	510.80	8.00	470.60	13.20	19.00
.............................................................................TATCACAGCCATTTTGACGA............................	20	5	510.00	5.00	479.80	15.60	9.60
.............................................................................TATCACAGCCATTTTTACGAGT..........................	22	5	299.20	5.40	246.00	19.00	28.80
.............................................................................TATCACAGCCATTTTGACGAAT..........................	22	5	268.40	16.60	250.20	1.20	0.40
.............................................................................TATCACAGCCATTTTGACGAGTTA........................	24	5	226.40	18.80	40.00	18.40	149.20
.............................................................................TATCACAGCCATTTTGACGACT..........................	22	5	217.20	9.60	194.40	8.60	4.60
.............................................................................TATCACAGCCATTTTGACGATT..........................	22	5	196.40	8.20	167.00	9.80	11.40
.............................................................................TATCACAGCAATTTTGACGAGT..........................	22	5	188.80	2.60	173.40	12.20	0.60
.............................................................................TATCACAGCCATTTTGACGAGC..........................	22	5	160.60	3.40	103.60	46.00	7.60
.............................................................................TATCACAGCCATTTTGACGAGA..........................	22	5	141.00	1.00	122.40	11.60	6.00
.............................................................................TATCACAGCCATTTTGATGAG...........................	21	5	135.60	1.80	118.60	14.80	0.40
.............................................................................TATCACATCCATTTTGACGAGTT.........................	23	5	133.40	22.20	105.60	3.20	2.40
.............................................................................TATAACAGCCATTTTGACGAGT..........................	22	5	113.80	4.60	98.00	10.60	0.60
.............................................................................TATCACAGCCATTTTGACGAGTTAA.......................	25	3	170.33	3.67	2.67	2.67	161.33
.............................................................................TATCACAGCCATCTTGACGAGT..........................	22	5	98.40	6.20	81.80	8.20	2.20
.............................................................................TATCACAGCCATTTTGACG.............................	19	5	93.20	0.20	88.20	3.40	1.40
.............................................................................TATCGCAGCCATTTTGACGAGT..........................	22	5	90.20	1.60	79.80	7.60	1.20
.............................................................................TATCACGGCCATTTTGACGAGT..........................	22	5	89.00	3.20	78.00	6.20	1.60
.............................................................................TATCACAGCCATTTTGACAAGT..........................	22	5	86.00	1.60	75.40	6.80	2.20
.............................................................................TATCACAGCCAxTTTGACGAGT..........................	21	5	83.20	1.40	79.80	1.40	0.60
.............................................................................TATCACAGCCATTTTGACGAGTTG........................	24	5	82.80	1.60	67.20	7.60	6.40
.............................................................................TATCACATCCATTTTGACGAG...........................	21	5	80.60	0.40	79.80	0.00	0.40
.............................................................................TATCACAGCCACTTTGACGAGT..........................	22	5	79.60	8.00	60.80	7.60	3.20
.................................................................................ACAGCCATTTTGACGAGT..........................	18	5	79.00	0.00	16.60	48.20	14.20
.............................................................................TATCACAGCCATTTTGATGAGTTT........................	24	5	78.60	6.00	39.00	32.20	1.40
.............................................................................TATCACAGCCATTTTGGCGAGT..........................	22	5	78.40	1.00	65.60	7.80	4.00
.............................................................................TATCACAGCCGTTTTGACGAGT..........................	22	5	75.40	4.80	49.60	18.80	2.20
.............................................................................TATCACAGCCCTTTTGACGAGT..........................	22	5	74.80	3.20	34.20	21.60	15.80
.............................................................................TATCACAGCCATTTCGACGAGT..........................	22	5	73.00	0.80	61.20	9.40	1.60
.............................................................................TATCACAGACATTTTGACGAGTT.........................	23	5	72.20	15.20	45.60	9.60	1.80
.............................................................................TATCACAGCCATTTTGACGCGT..........................	22	5	71.60	1.00	12.40	39.80	18.40
.............................................................................CATCACAGCCATTTTGACGAGT..........................	22	5	71.40	1.60	59.40	6.40	4.00
.............................................................................TATCACAGCCATTTTGACGAT...........................	21	5	70.60	0.80	68.60	0.40	0.80
.............................................................................TACCACAGCCATTTTGACGAGT..........................	22	5	68.20	1.60	60.40	4.00	2.20
.............................................................................TATCACAGCCATTTTGACGGGT..........................	22	5	67.20	1.60	56.80	5.20	3.60
.............................................................................TATCACACCCATTTTGACGAGT..........................	22	5	64.20	2.60	49.80	8.00	3.80
.............................................................................TATCACATCCATTTTGATGAGTT.........................	23	5	60.20	0.60	55.40	3.00	1.20
.............................................................................TATCACAGCCATTTTGAAGAGT..........................	22	5	58.80	1.80	51.40	4.20	1.40
.............................................................................TAGCACAGCCATTTTGACGAGTT.........................	23	5	58.80	0.00	44.40	13.40	1.00
.............................................................................TATCACAGCTATTTTGACGAGT..........................	22	5	57.80	1.20	49.60	6.00	1.00
.............................................................................TATCACAGCCATTTTTACGAGTT.........................	23	5	57.00	6.00	26.40	7.60	17.00
.............................................................................TATCACAGCCATTTTGACTAGTT.........................	23	5	53.60	5.60	34.80	4.80	8.40
.............................................................................TATCACAGCCATTTTGACGAGG..........................	22	5	52.40	0.20	32.00	14.40	5.80
.............................................................................TATTACAGCCATTTTGACGAGT..........................	22	5	51.00	1.20	45.00	4.40	0.40
.............................................................................TATCACAGCCATTTTGACGTGT..........................	22	5	47.60	0.80	13.40	29.80	3.60
.............................................................................TATCACAGCCATTTTCACGAGT..........................	22	5	47.40	5.40	21.20	14.60	6.20
.............................................................................TATCACAGTCATTTTGACGAGT..........................	22	5	47.20	1.40	37.20	7.40	1.20
.............................................................................TATCACAGCCATTTTAACGAGT..........................	22	5	46.80	6.20	31.20	7.40	2.00
.............................................................................TATCACAGCCATTTTGCCGAGT..........................	22	5	46.60	1.00	12.00	29.00	4.60
.............................................................................TATCACATCCATTTTGACTAGT..........................	22	3	75.00	0.67	72.33	1.00	1.00
.............................................................................TATCACAGCCATTCTGACGAGT..........................	22	5	44.60	4.00	33.60	5.20	1.80
.............................................................................TATCACAGCCATTTTGACTAG...........................	21	5	43.80	0.00	42.20	0.80	0.80
.............................................................................TATCATAGCCATTTTGACGAGT..........................	22	5	43.00	1.00	38.00	2.60	1.40
..............................................................................ATCACAGCCATTTTGACGAGT..........................	21	5	42.40	1.40	37.60	2.00	1.40
.............................................................................TATCACAGCCATTTTGACGATTT.........................	23	5	42.00	9.20	25.40	3.60	3.80
.............................................................................TATCACAGCCATTTTGACGAGTA.........................	23	5	39.60	2.00	28.80	5.80	3.00
.............................................................................TATCACAGCCATTTTGACGACTT.........................	23	5	39.20	16.80	18.00	2.60	1.80
.............................................................................TATCACAGCCATTTTGACGAATT.........................	23	5	38.20	14.60	21.80	0.60	1.20
.............................................................................TATCACAGACATTTTGACGAG...........................	21	5	38.00	0.20	36.20	1.60	0.00
.............................................................................TATCACAGCCATTTTGACCAGT..........................	22	5	37.80	0.80	26.60	5.80	4.60
.............................................................................TAGCACAGCCATTTTGACGAG...........................	21	5	37.20	0.00	36.00	1.20	0.00
.............................................................................TATCAAAGCCATTTTGACGAGT..........................	22	5	35.80	0.00	26.20	9.00	0.60
.............................................................................TATCACAGCCATTTTGACGCGTT.........................	23	5	35.80	1.40	2.20	24.00	8.20
.............................................................................TATCACAGCCAxxTTGACGAGT..........................	20	3	59.00	2.33	56.33	0.33	0.00
.............................................................................TATCACAACCATTTTGACGAGT..........................	22	5	35.20	0.40	28.60	4.00	2.20
.............................................................................TATCACAGCCAGTTTGACGAGT..........................	22	5	32.80	9.40	2.20	19.20	2.00
.............................................................................TATCACATCCATTTTGATGAGT..........................	22	5	30.40	0.20	30.00	0.20	0.00
.............................................................................TATCACAGCCATTTTGACGAGCT.........................	23	5	30.20	2.20	7.80	13.80	6.40
.................................................................................ACAGCCATTTTGACGAGTT.........................	19	5	28.60	0.60	1.60	19.80	6.60
.............................................................................TGTCACAGCCATTTTGACGAGT..........................	22	5	28.20	2.40	20.40	4.00	1.40
.............................................................................TATCACATCCATTTTGACGAGTTT........................	24	5	28.00	3.80	23.80	0.40	0.00
............................................................................CTATCACAGCCATTTTGACGAGT..........................	23	5	27.60	0.20	21.00	4.80	1.60
...............................................................................TCACAGCCATTTTGACGAGT..........................	20	5	26.40	1.20	23.00	1.80	0.40
.............................................................................TATCACAGCAATTTTGACGAGTT.........................	23	5	25.20	4.20	13.00	7.80	0.20
.............................................................................TATCACAGCCATTTTGACGAA...........................	21	5	24.40	0.20	22.60	1.40	0.20
.............................................................................TATCACAGCCATTTTGACGAGTTTT.......................	25	5	24.40	8.20	9.40	6.60	0.20
.............................................................................TATCACATCCATTTTTACGAGT..........................	22	3	39.67	0.67	36.33	0.67	2.00
.............................................................................TATCACAGCCATTTTGTCGAGT..........................	22	5	23.00	0.20	8.80	12.20	1.80
.............................................................................TATCACAGCCACTTTGACGAGTT.........................	23	5	21.40	8.00	7.20	5.00	1.20
.............................................................................TAGCACAGCCATTTTGATGAGTT.........................	23	5	21.40	0.00	14.20	7.00	0.20
...............................................................................TATCAGCCATTTTGACGAGT..........................	20	3	35.33	4.00	31.33	0.00	0.00
.............................................................................TCTCACAGCCATTTTGACGAGT..........................	22	5	21.00	2.60	14.40	2.60	1.40
.............................................................................TATCACAGACATTTTGATGAGTT.........................	23	5	20.80	0.40	16.60	3.40	0.40
.............................................................................TATCACAGCCCTTTTGACGAGTT.........................	23	5	20.80	4.20	2.20	8.40	6.00
.............................................................................TATCACAGCCATTTTGCCGAGTT.........................	23	5	20.40	0.80	2.00	15.20	2.40
.............................................................................TATAACAGCCATTTTGACGAGTT.........................	23	5	20.20	5.40	8.60	5.00	1.20
.............................................................................TATCACAGCCATATTGACGAGT..........................	22	5	19.60	9.40	8.80	1.00	0.40
.............................................................................AATCACAGCCATTTTGACGAGT..........................	22	5	19.60	0.60	10.80	7.20	1.00
.............................................................................TATCCCAGCCATTTTGACGAGT..........................	22	5	19.20	0.60	13.20	4.60	0.80
.............................................................................TATCACAGCCAGTTTGACGAGTT.........................	23	5	18.60	12.00	0.80	5.40	0.40
.............................................................................TATCACCGCCATTTTGACGAGT..........................	22	5	18.20	1.80	11.00	3.20	2.20
.............................................................................TATCACAGCCATTTTTACGAG...........................	21	5	17.80	0.20	14.00	0.80	2.80

dp4

GCTA---CTGCTGCT---------GCACATTTACGCGTCAAAATGACTGTGAGCTATGTGT----TTTTGA-TCTCATATCACAGCCATTTTGACGAGTTTGATG-TGCAGTCCC------ACTC	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
.............................................................................TATCACAGCCATTTTGACGAGT..........................	22	5	16063.00	2810.40	8686.40	4561.20	5.00
.............................................................................TATCACAGCCATTTTGACGAGTT.........................	23	5	7695.20	2572.40	2972.00	2144.40	6.40
.............................................................................TATCACAGCCATTTTGATGAGTT.........................	23	5	3122.20	38.20	1799.40	1284.60	0.00
.............................................................................TATCACAGCCATTTTGACGAG...........................	21	5	900.80	89.00	622.80	186.60	2.40
.............................................................................TATCACAGCCATTTTGATGAGT..........................	22	5	770.00	14.60	255.40	500.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGTTT........................	24	5	522.80	388.60	46.20	88.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGTTA........................	24	5	213.80	43.40	152.60	17.80	0.00
.................................................................................ACAGCCATTTTGACGAGT..........................	18	5	150.40	12.80	94.60	43.00	0.00
.............................................................................TATCACAGCCCTTTTGACGAGT..........................	22	5	82.40	1.20	71.40	9.80	0.00
.............................................................................TATCACAGCCATTTTGACGCGT..........................	22	5	81.00	1.40	56.80	22.80	0.00
.............................................................................TATCACAGACATTTTGACGAGT..........................	22	5	72.20	1.00	61.60	9.60	0.00
.............................................................................TATCACAGCCATTTTGATGAG...........................	21	5	65.00	1.00	9.80	54.20	0.00
.............................................................................TATCACAGCCATTTTGACGA............................	20	5	62.00	6.80	38.20	16.60	0.40
.................................................................................ACAGCCATTTTGACGAGTT.........................	19	5	62.00	12.40	26.40	23.20	0.00
.............................................................................TATCACAGCCATTTTGACGAGTTAA.......................	25	3	98.67	19.00	75.00	4.67	0.00
.............................................................................TATCACAGCCATTTTGACGAGC..........................	22	5	47.20	6.20	13.20	27.80	0.00
.............................................................................TATCACAGCCATTTTGACGAGG..........................	22	5	45.40	1.20	36.60	7.60	0.00
.............................................................................TAGCACAGCCATTTTGACGAGT..........................	22	5	41.60	0.20	18.60	22.80	0.00
.............................................................................TATCACAGCCATTTTGCCGAGT..........................	22	5	41.60	1.80	16.20	23.60	0.00
.............................................................................TATCACAGCCATTTTGATGAGTTT........................	24	5	38.80	1.40	7.80	29.60	0.00
.............................................................................TATCACAGCCATTTTGACGCGTT.........................	23	5	38.00	4.40	21.40	12.00	0.20
.............................................................................TATCACAGCCATTTTGACGTGT..........................	22	5	37.60	0.40	28.80	8.40	0.00
.............................................................................TATCACAGCCATTTTGACGAGA..........................	22	5	37.20	2.20	22.80	12.20	0.00
.................................................................................ACAGCCATTTTGATGAGTT.........................	19	5	34.80	0.00	18.20	16.60	0.00
..................................GCGTCAAAATGACTGTGAGCTATG...................................................................	24	2	79.50	49.50	18.50	11.50	0.00
.............................................................................TATCACAGACATTTTGACGAGTT.........................	23	5	30.80	0.20	26.80	3.80	0.00
.............................................................................TATCACAGCCGTTTTGACGAGT..........................	22	5	30.00	1.20	21.20	7.60	0.00
.............................................................................TATCACAGCCATTTTGGCGAGT..........................	22	5	28.40	2.40	19.60	6.40	0.00
.............................................................................TATCACAGCCATTTTGACGAGCT.........................	23	5	28.40	3.20	15.40	9.80	0.00
.............................................................................TATCACAGCCAGTTTGACGAGT..........................	22	5	27.80	0.00	18.80	9.00	0.00
.............................................................................TATCACAGCCCTTTTGACGAGTT.........................	23	5	27.60	1.20	22.00	4.40	0.00
.............................................................................TATCACAGCCATTTTGTCGAGT..........................	22	5	26.80	0.40	22.00	4.40	0.00
..............................................................................ATCACAGCCATTTTGACGAGTT.........................	22	5	25.60	7.80	11.20	6.60	0.00
.............................................................................TATCACAGCCATTTTTACGAGT..........................	22	5	24.40	0.80	19.20	4.40	0.00
.............................................................................TATCACAGCCATTTTGACGGGT..........................	22	5	23.20	3.40	13.40	6.40	0.00
.............................................................................TATCACAGCCATTTTGACGAGTA.........................	23	5	23.20	5.80	9.80	7.60	0.00
.............................................................................TATCACAGCCATTTTGACGAGTTC........................	24	5	23.20	16.00	2.00	5.20	0.00
.............................................................................TATCACAGCCATTTTGCTGAGTT.........................	23	5	22.40	0.00	9.60	12.80	0.00
.............................................................................TATCACAGCCATTTTGATGAGCT.........................	23	5	21.80	0.00	14.60	7.20	0.00
.............................................................................TATCACAGCCATTTTGACAAGT..........................	22	5	21.60	0.80	10.20	10.60	0.00
.............................................................................TACCACAGCCATTTTGACGAGT..........................	22	5	21.60	1.40	8.80	11.40	0.00
.............................................................................TATCACAGCCATTTTGACGAGGT.........................	23	5	21.40	0.00	19.00	2.40	0.00
.............................................................................TATCACAGTCATTTTGACGAGT..........................	22	5	21.20	0.60	17.20	3.40	0.00
.............................................................................TATCGCAGCCATTTTGACGAGT..........................	22	5	20.60	2.20	11.60	6.80	0.00
.............................................................................TATCAAAGCCATTTTGACGAGT..........................	22	5	20.40	1.40	17.20	1.80	0.00
............................................................................CTATCACAGCCATTTTGACGAGT..........................	23	5	20.20	2.40	12.20	5.60	0.00
.............................................................................TATAACAGCCATTTTGACGAGT..........................	22	5	19.80	2.20	13.80	3.80	0.00
.............................................................................TATCACAGCCATTTTGACTAGT..........................	22	5	19.20	3.20	9.20	6.60	0.20
.............................................................................TATCACGGCCATTTTGACGAGT..........................	22	5	18.60	4.20	10.00	4.40	0.00
.............................................................................TATCACAGCAATTTTGACGAGT..........................	22	5	18.40	1.00	12.60	4.80	0.00
.............................................................................TATCACAGCCATCTTGACGAGT..........................	22	5	18.20	2.00	12.60	3.60	0.00
.............................................................................TATCACAGCCATTTTGCCGAGTT.........................	23	5	18.20	1.60	5.60	11.00	0.00
.............................................................................TATCACAGCCATTTTGACGTGTT.........................	23	5	18.00	0.60	11.60	5.80	0.00
.............................................................................TAGCACAGCCATTTTGACGAGTT.........................	23	5	17.80	0.00	5.60	12.20	0.00
.............................................................................TATCACAGACATTTTGATGAGTT.........................	23	5	17.00	0.00	15.00	2.00	0.00
.............................................................................TATCACAGCCATTTCGACGAGT..........................	22	5	16.60	2.20	7.80	6.60	0.00
.............................................................................TATCACAGCCATTTTGAAGAGT..........................	22	5	16.40	0.60	11.40	4.40	0.00
.............................................................................CATCACAGCCATTTTGACGAGT..........................	22	5	15.80	1.80	9.40	4.60	0.00
.............................................................................TATCACAGCTATTTTGACGAGT..........................	22	5	15.40	0.60	11.40	3.40	0.00
.............................................................................TATCACAGCCATTTTGATGCGTT.........................	23	5	15.00	0.00	8.00	7.00	0.00
.............................................................................TATCACAGCCTTTTTGACGAGT..........................	22	5	14.80	0.20	10.80	3.80	0.00
..............................................................................ATCACAGCCATTTTGACGAGT..........................	21	5	14.20	4.00	6.20	4.00	0.00
.............................................................................TAACACAGCCATTTTGACGAGT..........................	22	5	14.00	0.20	4.00	9.80	0.00
.............................................................................TATCACAGCCACTTTGACGAGT..........................	22	5	14.00	2.20	8.00	3.80	0.00
.............................................................................TATCACAGCCATTTTAACGAGT..........................	22	5	13.80	1.00	7.80	5.00	0.00
.............................................................................TATCACAGCCGTTTTGATGAGTT.........................	23	5	13.80	0.80	2.20	10.80	0.00
.............................................................................TATCACAGCCATTTTGGCGAGTT.........................	23	5	13.60	3.20	7.40	3.00	0.00
.............................................................................TATCACGGCCATTTTGATGAGTT.........................	23	5	13.40	0.40	2.20	10.80	0.00
............................................................................CTATCACAGCCATTTTGACGAGTT.........................	24	5	13.40	5.40	4.60	3.40	0.00
.............................................................................TATTACAGCCATTTTGACGAGT..........................	22	5	12.80	1.80	8.60	2.40	0.00
.............................................................................TATCACAGCCATTTTGACGAGTC.........................	23	5	12.40	3.60	4.40	4.20	0.20
.............................................................................TGTCACAGCCATTTTGACGAGT..........................	22	5	12.20	1.60	6.20	4.40	0.00
.............................................................................TATCACAGCCATTTTGTCGAGTT.........................	23	5	11.60	0.00	9.60	2.00	0.00
.............................................................................TATCACAGCCATTTTCACGAGT..........................	22	5	11.60	1.60	5.80	4.20	0.00
.............................................................................TATCACAGCCATTTTGACGATT..........................	22	5	11.60	1.00	4.60	6.00	0.00
.............................................................................TATCACAGCCATTTTGATGAGGT.........................	23	5	11.20	0.00	9.80	1.40	0.00
.............................................................................TATCATAGCCATTTTGACGAGT..........................	22	5	11.00	1.60	7.20	2.20	0.00
.............................................................................TATCACAGGCATTTTGACGAGT..........................	22	5	10.60	0.20	9.60	0.80	0.00
.............................................................................TATCACAGCCATTTTGACCAGT..........................	22	5	10.60	2.00	5.00	3.60	0.00
.............................................................................TATCACAGCCATTTTGACGAGTTG........................	24	5	10.40	0.80	8.40	1.00	0.20
.............................................................................TATCACAGCCATTTTGACG.............................	19	5	10.40	0.00	4.40	4.20	1.80
.............................................................................GATCACAGCCATTTTGACGAGT..........................	22	5	10.20	0.80	6.60	2.80	0.00
.............................................................................TATCACAGCCATTTTGACGACT..........................	22	5	10.20	0.20	5.40	4.60	0.00
..................................GCGTCAAAATGACTGTGAGCTAT....................................................................	23	2	25.00	19.00	4.00	2.00	0.00
.............................................................................TATCACAGCCGTTTTGACGAGTT.........................	23	5	9.60	1.20	5.20	3.20	0.00
.............................................................................TATCACAGCCATTTTTACGAGTT.........................	23	5	9.60	0.20	5.60	3.80	0.00
.............................................................................TATCACAGCCATTTTGGTGAGTT.........................	23	5	9.60	0.20	6.20	3.20	0.00
.............................................................................TATCACAACCATTTTGACGAGT..........................	22	5	9.40	0.60	7.00	1.80	0.00
.............................................................................TATCAAAGCCATTTTGACGAGTT.........................	23	5	9.40	0.80	6.80	1.80	0.00
.............................................................................TATCACAGCCATTTTGACAAGTT.........................	23	5	9.40	0.80	3.80	4.80	0.00
.............................................................................TACCACAGCCATTTTGACGAGTT.........................	23	5	9.20	2.20	3.20	3.80	0.00
.................................................................................ACAGCCATTTTGATGAGT..........................	18	5	8.80	0.00	2.60	6.20	0.00
.............................................................................TATCACAGCCATGTTGACGAGT..........................	22	5	8.80	0.00	6.80	1.80	0.20
.............................................................................TATCACAGCCAGTTTGACGAGG..........................	22	3	14.33	0.00	12.33	2.00	0.00
.............................................................................TATCACAGCCATTTTGATGTGTT.........................	23	5	8.60	0.00	6.20	2.40	0.00
.............................................................................TATCACGGCCATTTTGACGAGTT.........................	23	5	8.60	2.40	3.80	2.40	0.00
.............................................................................TATCACAGCCATTTTGACGAAT..........................	22	5	8.40	0.80	4.80	2.80	0.00
.............................................................................TATCACAGCCAGTTTGACGAGTT.........................	23	5	8.40	0.00	5.00	3.40	0.00
.............................................................................TATCACAGCCATTTTGACGAGTAA........................	24	3	14.00	5.00	8.33	0.67	0.00
.............................................................................TATCACAGCCATTGTGACGAGT..........................	22	5	8.40	0.00	4.60	3.80	0.00
.............................................................................AATCACAGCCATTTTGACGAGT..........................	22	5	8.20	0.00	6.40	1.80	0.00

droPer1

GCTA---CTGCTGCT---------GCACATTTACGCGTCAAAATGACTGTGAGCTATGTGT----TTTTGA-TCTCATATCACAGCCATTTTGACGAGTTTGATG-TGCAGTCCC------ACTC	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
.............................................................................TATCACAGCCATTTTGACGAGT..........................	22	5	14430.80	799.20	1923.00	4663.40	6973.40	71.80
.............................................................................TATCACAGCCATTTTGACGAGTT.........................	23	5	7155.40	679.40	767.80	1855.00	3820.00	33.20
.............................................................................TATCACAGCCATTTTGATGAGTT.........................	23	5	2875.60	20.00	455.80	1315.20	1081.20	3.40
.............................................................................TATCACAGCCATTTTGATGAGT..........................	22	5	928.60	6.40	72.60	476.00	372.60	1.00
.............................................................................TATCACAGCCATTTTGACGAG...........................	21	5	600.00	22.40	191.20	184.00	180.40	22.00
.............................................................................TATCACAGCCATTTTGACGAGTTT........................	24	5	346.20	74.20	15.40	59.40	197.20	0.00
.................................................................................ACAGCCATTTTGACGAGT..........................	18	5	151.20	0.40	22.20	48.00	80.40	0.20
.............................................................................TATCACAGCCATTTTGACGAGTTA........................	24	5	131.80	11.20	62.60	15.40	41.00	1.60
.............................................................................TATCACAGCCATTTTGACGAGC..........................	22	5	111.20	1.00	2.60	32.80	73.60	1.20
.............................................................................TATCACAGCCATTTTGACGCGT..........................	22	5	92.60	0.00	14.60	26.80	51.20	0.00
.............................................................................TATCACAGCCATTTTGATGAG...........................	21	5	86.40	0.60	1.80	51.40	32.40	0.20
.............................................................................TAGCACAGCCATTTTGACGAGT..........................	22	5	77.80	0.00	1.00	8.20	68.60	0.00
.............................................................................TATCACAGCCATTTTGATGAGTTT........................	24	5	71.00	1.60	1.00	30.60	37.80	0.00
.................................................................................ACAGCCATTTTGACGAGTT.........................	19	5	64.40	0.80	7.60	18.40	37.40	0.20
.............................................................................TATCACAGCCATTTTGACGA............................	20	5	62.20	2.00	25.60	14.80	16.60	3.20
.............................................................................TATCACAGCCATTTTGCCGAGT..........................	22	5	61.80	0.00	2.40	19.00	40.40	0.00
.............................................................................TATCACAGCCATTTTGACGCGTT.........................	23	5	58.00	0.40	6.00	13.80	37.80	0.00
.............................................................................TATCACAGCCATTTTGACGTGT..........................	22	5	47.60	0.00	5.40	4.20	38.00	0.00
.............................................................................TATCACAGCCCTTTTGACGAGT..........................	22	5	42.60	0.20	15.00	6.80	20.60	0.00
.............................................................................TATCACAGCCATTTTGACGAGCT.........................	23	5	40.40	0.80	1.20	8.60	29.60	0.20
.............................................................................TAGCACAGCCATTTTGACGAGTT.........................	23	5	40.00	0.00	1.00	2.00	37.00	0.00
..................................GCGTCAAAATGACTGTGAGCTATG...................................................................	24	2	96.50	47.50	6.00	10.50	31.50	1.00
.............................................................................TATCACAGCCATTTTGACGAGTTAA.......................	25	3	62.67	3.00	47.00	2.00	9.33	1.33
.............................................................................TATCACAGCCATTTTGACGAGA..........................	22	5	34.20	0.20	3.60	14.60	15.60	0.20
.............................................................................TATCACAGCCATTTTTACGAGT..........................	22	5	33.80	1.00	2.60	7.00	23.20	0.00
.............................................................................TATCACAGACATTTTGACGAGT..........................	22	5	33.20	0.60	5.80	3.20	23.60	0.00
.............................................................................TATCACAGCCAGTTTGACGAGT..........................	22	5	33.00	0.00	0.60	3.80	28.60	0.00
.............................................................................TATCACAGCCATTTTGACGAGG..........................	22	5	32.40	0.20	3.20	4.00	20.20	4.80
.............................................................................TATCACAGCCATTTTGCCGAGTT.........................	23	5	31.80	0.00	1.60	6.40	23.80	0.00
.............................................................................TATCACAGCCATTTTGACGTGTT.........................	23	5	29.80	0.20	2.20	1.80	25.60	0.00
.............................................................................TATCACAGCCATTTTCACGAGT..........................	22	5	29.60	0.20	1.60	5.20	22.60	0.00
.................................................................................ACAGCCATTTTGATGAGTT.........................	19	5	29.40	0.00	3.20	14.00	12.20	0.00
.............................................................................TATCACAGCCGTTTTGACGAGT..........................	22	5	28.60	1.00	2.40	4.80	20.40	0.00
.............................................................................TATCACAGCCATTTTGACTAGT..........................	22	5	27.60	0.80	1.20	6.60	17.40	1.60
.............................................................................TATCACAGCCATTTTGACGATT..........................	22	5	24.80	0.20	1.00	5.60	18.00	0.00
.............................................................................TATCACAGCCATTTTGTCGAGT..........................	22	5	24.60	0.60	2.80	3.20	18.00	0.00
.............................................................................TATCAGAGCCATTTTGACGAGT..........................	22	5	24.00	0.00	0.40	16.40	7.20	0.00
.............................................................................TATCACAGCCATTTTAACGAGT..........................	22	5	22.40	0.40	1.40	7.60	13.00	0.00
..............................................................................ATCACAGCCATTTTGACGAGTT.........................	22	5	22.20	4.00	0.60	6.80	10.80	0.00
.............................................................................TATCACAGCCATTTTGACAAGT..........................	22	5	22.00	0.40	2.40	11.80	7.40	0.00
.............................................................................TATCACAGCCATTTTGACGGGT..........................	22	5	21.60	0.80	1.40	5.00	14.40	0.00
.............................................................................TATCACAGCCACTTTGACGAGT..........................	22	5	21.40	0.40	2.60	5.40	13.00	0.00
.............................................................................TATCACAGACATTTTGACGAGTT.........................	23	5	21.20	0.20	5.60	1.60	13.80	0.00
.............................................................................TATAACAGCCATTTTGACGAGT..........................	22	5	21.20	0.20	2.40	1.60	17.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGTTC........................	24	5	20.80	11.40	0.40	3.60	5.20	0.20
.............................................................................TATCACAGCCATTTTGGCGAGT..........................	22	5	20.40	0.40	3.00	3.80	13.20	0.00
.............................................................................TATCGCAGCCATTTTGACGAGT..........................	22	5	20.00	1.20	1.80	6.60	10.20	0.20
.............................................................................TATCACAGCCATTTTGTCGAGTT.........................	23	5	19.80	0.00	1.20	2.20	16.40	0.00
.............................................................................TATCACAGCCCTTTTGACGAGTT.........................	23	5	19.80	0.20	6.60	3.40	9.60	0.00
.............................................................................TATCACGGCCATTTTGATGAGTT.........................	23	5	19.40	0.20	1.00	8.80	9.40	0.00
.............................................................................TATCACAGCCATTTTGACGAGTA.........................	23	5	19.40	0.60	5.00	4.80	9.00	0.00
.............................................................................TATCACAGCCATTTTGCTGAGTT.........................	23	5	19.20	0.00	2.20	6.60	10.40	0.00
.............................................................................TATCACAGCCATTTTGATGAGCT.........................	23	5	18.20	0.00	1.40	8.20	8.60	0.00
.............................................................................TATCACAGCCAGTTTGACGAGTT.........................	23	5	17.40	0.00	1.00	2.00	14.40	0.00
.............................................................................TAGCACAGCCATTTTGATGAGTT.........................	23	5	17.20	0.00	0.00	2.00	15.20	0.00
.............................................................................TATCACAGCCTTTTTGACGAGT..........................	22	5	16.80	0.00	1.20	3.00	12.60	0.00
.............................................................................TATCAAAGCCATTTTGACGAGT..........................	22	5	16.80	0.00	0.60	8.60	7.60	0.00
.............................................................................TATCACAGCCATTTTTACGAGTT.........................	23	5	16.60	0.20	0.80	2.20	13.40	0.00
.............................................................................TATCACAGCCATTTCGACGAGT..........................	22	5	16.20	0.40	0.80	5.80	9.20	0.00
.............................................................................TATCACAGCAATTTTGACGAGT..........................	22	5	15.80	0.20	1.80	2.40	11.40	0.00
.............................................................................TACCACAGCCATTTTGACGAGT..........................	22	5	15.80	0.40	1.80	4.40	9.20	0.00
.............................................................................TATCACAGCCGTTTTGACGAGTT.........................	23	5	15.60	0.20	1.20	3.20	11.00	0.00
.............................................................................CATCACAGCCATTTTGACGAGT..........................	22	5	15.20	0.40	1.20	3.60	10.00	0.00
............................................................................CTATCACAGCCATTTTGACGAGT..........................	23	5	15.00	0.20	2.20	4.40	8.20	0.00
.............................................................................TATCACAGTCATTTTGACGAGT..........................	22	5	14.80	0.40	2.20	2.80	9.40	0.00
.............................................................................TATCACAGCCATTTTCACGAGTT.........................	23	5	14.60	0.00	0.60	3.20	10.80	0.00
.............................................................................TATCACATCCATTTTGACGAGT..........................	22	5	14.60	1.60	1.20	3.20	8.20	0.40
.............................................................................TATCACAGCCATTTTGACGAGTC.........................	23	5	14.40	1.20	0.80	2.20	10.00	0.20
.............................................................................TATCACGGCCATTTTGACGAGT..........................	22	5	14.20	0.40	1.60	3.20	9.00	0.00
.............................................................................TATCACAGCCATTTTGACGACT..........................	22	5	14.20	0.00	0.20	2.40	11.60	0.00
.............................................................................TATCACAGCCATGTTGACGAGT..........................	22	5	14.20	0.00	0.20	1.20	12.20	0.60
.............................................................................TATCACAGCCATTCTGACGAGT..........................	22	5	13.40	0.40	0.80	2.80	9.40	0.00
.............................................................................TATCACACCCATTTTGACGAGT..........................	22	5	13.20	0.40	1.00	3.00	8.60	0.20
.............................................................................TATCACAGCCATTGTGACGAGT..........................	22	5	13.20	0.00	1.60	1.20	10.40	0.00
.............................................................................TATCATAGCCATTTTGACGAGT..........................	22	5	13.20	0.20	1.60	8.20	3.20	0.00
.............................................................................TATCACAGCCATCTTGACGAGT..........................	22	5	13.00	0.80	0.40	4.00	7.80	0.00
.............................................................................TATCACAGCCATTTTGGCGAGTT.........................	23	5	13.00	0.60	1.20	1.40	9.80	0.00
.............................................................................TATCACAGCCATTTTGAAGAGT..........................	22	5	12.80	0.00	2.20	3.60	7.00	0.00
.............................................................................TAACACAGCCATTTTGACGAGT..........................	22	5	12.60	0.20	1.00	1.20	10.20	0.00
.............................................................................AATCACAGCCATTTTGACGAGT..........................	22	5	12.40	0.20	1.00	2.20	9.00	0.00
..............................................................................ATCACAGCCATTTTGACGAGT..........................	21	5	12.40	1.40	0.20	4.00	6.80	0.00
.............................................................................TATCACAGCCGTTTTGATGAGTT.........................	23	5	12.40	0.40	0.20	6.60	5.20	0.00
.............................................................................TATCACAGCCATTTTGACGAGTTG........................	24	5	12.20	0.00	5.60	1.80	2.20	2.60
.............................................................................TATCACAGCCATTTTGATGCGTT.........................	23	5	12.20	0.00	1.80	4.40	6.00	0.00
.................................................................................ACAGCCATTTTGATGAGT..........................	18	5	11.60	0.00	0.60	6.20	4.80	0.00
.............................................................................GATCACAGCCATTTTGACGAGT..........................	22	5	11.40	0.60	2.80	1.40	6.60	0.00
.............................................................................TATCACAGCCATTTTGCCGCGT..........................	22	3	19.00	0.00	0.67	4.00	14.33	0.00
.............................................................................TATCACAGCCATTTTGACG.............................	19	5	11.20	0.00	1.80	2.80	4.20	2.40
.............................................................................TATCACAGCCATTTTGACTAGTT.........................	23	5	11.20	0.40	0.40	1.60	8.60	0.20
.............................................................................TATCACAGCCATTTTGACGGGTT.........................	23	5	11.20	0.40	1.00	2.00	7.80	0.00
.............................................................................TATCACAGCCACTTTGACGAGTT.........................	23	5	11.00	0.60	0.60	2.00	7.60	0.20
.............................................................................TATCACAGCTATTTTGACGAGT..........................	22	5	11.00	0.00	0.40	4.00	6.60	0.00
.............................................................................TATCACAGCCATTTTGACGAGGT.........................	23	5	10.40	0.00	1.80	1.40	7.20	0.00
.............................................................................TATCAGAGCCATTTTGACGAGTT.........................	23	5	10.40	0.00	0.40	5.40	4.60	0.00
.............................................................................TATCACAGCCATTTTGACCAGT..........................	22	5	10.20	0.20	0.40	2.60	7.00	0.00
.............................................................................TATCACAGCCATTTTGACGATTT.........................	23	5	10.20	0.60	0.20	1.80	7.60	0.00
.............................................................................TATCACAACCATTTTGACGAGT..........................	22	5	10.00	0.00	1.00	2.60	6.40	0.00
.............................................................................TATCACAGCCATTTTGATGTGTT.........................	23	5	10.00	0.00	2.00	1.80	6.20	0.00
.............................................................................TGTCACAGCCATTTTGACGAGT..........................	22	5	9.60	0.20	0.60	2.40	6.40	0.00
.............................................................................CATCACAGCCATTTTGACGAGTT.........................	23	5	9.40	1.00	0.60	3.20	4.60	0.00
.............................................................................TATCACAGCAATTTTGACGAGTT.........................	23	5	9.40	0.40	1.00	2.00	6.00	0.00

droWil1

CTTA---CAACTGAT---------GTCCATGGTCGCGTCAAAATGACTGTGAGCTATGTTAACCGGTCAGAAATTCATATCACAGCCATTTTGACGAGTTCGATG-GGCATAC----------GA	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
.............................................................................TATCACAGCCATTTTGACGAGT..........................	22	5	157987.60	1555.40	73681.80	81597.60	1152.80
.............................................................................TATCACAGCCATTTTGACGAGTT.........................	23	5	24976.40	830.20	18871.80	5082.00	192.40
.............................................................................TATCACAGCCATTTTGATGAGTT.........................	23	5	10595.20	51.60	7971.20	2523.00	49.40
.............................................................................TATCACAGCCATTTTGACGAG...........................	21	5	8718.20	49.40	1838.00	6161.80	669.00
.............................................................................TATCACAGCCATTTTGATGAGT..........................	22	5	2025.60	10.00	728.20	1251.60	35.80
.............................................................................TATCACAGCCATTTTGACGAGTTA........................	24	5	1394.80	6.20	1370.20	18.00	0.40
.............................................................................TATCACAGCCATTTTGACGAGTTAA.......................	25	3	1458.33	2.00	1452.33	3.33	0.67
.............................................................................TATCACAGCCATTTTGACGAGTTT........................	24	5	650.20	71.80	361.40	214.80	2.20
.............................................................................TATCACATCCATTTTGACGAGT..........................	22	5	473.20	2.00	324.20	144.60	2.40
.............................................................................TATCACAGCCATTTTGACGA............................	20	5	464.20	4.00	65.60	365.80	28.80
.............................................................................TATCACAGCCATTTTGACGAGC..........................	22	5	458.00	4.80	106.80	307.60	38.80
.............................................................................TATCACAGCCATTTTGACTAGT..........................	22	5	417.00	2.20	244.40	166.00	4.40
.............................................................................TATCACAGACATTTTGACGAGT..........................	22	5	352.20	0.60	102.40	248.20	1.00
.............................................................................TATCACAGCAATTTTGACGAGT..........................	22	5	344.80	0.00	93.40	251.40	0.00
.............................................................................TATAACAGCCATTTTGACGAGT..........................	22	5	335.20	0.20	97.60	237.40	0.00
.............................................................................CATCACAGCCATTTTGACGAGT..........................	22	5	332.20	1.40	70.00	260.60	0.20
.............................................................................TATCACAGCCATTTTGAAGAGT..........................	22	5	310.80	0.40	43.60	266.60	0.20
.............................................................................TATCACAGCCCTTTTGACGAGT..........................	22	5	279.60	4.80	84.80	189.80	0.20
.................................................................................ACAGCCATTTTGACGAGT..........................	18	5	263.20	0.80	113.60	144.00	4.80
.............................................................................TATCACAGCCATTTTGACAAGT..........................	22	5	261.00	1.60	69.00	189.20	1.20
.............................................................................TATCACAGCCATTTTGACGAGTTAAA......................	26	2	642.50	0.50	641.50	0.50	0.00
.............................................................................TATCAAAGCCATTTTGACGAGT..........................	22	5	248.20	0.20	25.20	222.60	0.20
.............................................................................TATCACAGCCATTTTGACGAGA..........................	22	5	234.00	1.20	56.80	171.20	4.80
.............................................................................TATCACAGCCATTTTTACGAGT..........................	22	5	220.60	0.40	155.20	64.00	1.00
.............................................................................TATCACAGCCATTTTGATGAG...........................	21	5	215.80	0.40	23.00	145.60	46.80
.............................................................................TATCACAACCATTTTGACGAGT..........................	22	5	215.60	0.60	31.60	182.80	0.60
.............................................................................TATCACAGCCATTTTGACG.............................	19	5	210.40	0.20	4.20	107.60	98.40
.............................................................................TACCACAGCCATTTTGACGAGT..........................	22	5	191.80	2.60	71.00	117.60	0.60
.............................................................................TATCACAGCCATTTCGACGAGT..........................	22	5	182.80	1.80	68.00	112.40	0.60
.............................................................................TATCGCAGCCATTTTGACGAGT..........................	22	5	179.00	2.60	78.60	96.80	1.00
.............................................................................TATCACAGCCAxTTTGACGAGT..........................	21	5	178.60	2.00	77.00	99.60	0.00
.............................................................................TATCACAGCCATTTTGACGAGG..........................	22	5	178.40	0.00	44.80	63.00	70.60
.............................................................................TATCACACCCATTTTGACGAGT..........................	22	5	176.40	2.40	70.00	103.60	0.40
.............................................................................TATCACAGCCACTTTGACGAGT..........................	22	5	165.40	1.20	51.60	112.00	0.60
.............................................................................TATCACAGCCATCTTGACGAGT..........................	22	5	162.00	0.60	64.40	95.60	1.40
.............................................................................TATCACAGCCATTTTGACGAAT..........................	22	5	159.20	1.80	23.20	134.00	0.20
.............................................................................AATCACAGCCATTTTGACGAGT..........................	22	5	158.80	0.00	10.40	148.40	0.00
.............................................................................TATCACGGCCATTTTGACGAGT..........................	22	5	155.80	2.40	67.00	85.00	1.40
.............................................................................TATCACAGCCATTTTGACGGGT..........................	22	5	152.00	0.80	70.20	81.00	0.00
............................................................................CTATCACAGCCATTTTGACGAGT..........................	23	5	151.00	0.60	71.00	79.40	0.00
..............................................................................ATCACAGCCATTTTGACGAGT..........................	21	5	148.40	1.20	37.00	109.20	1.00
.............................................................................TATCACAGCCATTTTGGCGAGT..........................	22	5	148.00	1.80	63.80	82.40	0.00
.............................................................................TATCACAGCCATTTTAACGAGT..........................	22	5	146.80	0.40	28.40	117.80	0.20
.............................................................................TATCACAGCCATTTTGACGAGTTC........................	24	3	237.00	27.33	53.33	148.67	7.67
.............................................................................TATCACAGCCATTTTGCCGAGT..........................	22	5	137.60	1.20	30.80	105.60	0.00
.............................................................................TATCACAGCCATTTTGACGCGT..........................	22	5	121.00	2.00	37.40	81.20	0.40
.............................................................................TATTACAGCCATTTTGACGAGT..........................	22	5	118.60	0.60	40.80	76.60	0.60
.............................................................................TATCATAGCCATTTTGACGAGT..........................	22	5	115.40	0.80	38.80	75.60	0.20
.............................................................................TATCACAGCCGTTTTGACGAGT..........................	22	5	112.80	0.40	45.00	66.40	1.00
.............................................................................TATCACAGCCATTTTGACCAGT..........................	22	5	107.60	2.00	39.20	64.00	2.40
.............................................................................GATCACAGCCATTTTGACGAGT..........................	22	5	105.80	0.00	10.20	95.60	0.00
.............................................................................TATCACAGCCATTCTGACGAGT..........................	22	5	103.00	2.00	32.60	68.20	0.20
.............................................................................TATCACATCCATTTTGACGAGTT.........................	23	5	96.00	1.00	83.80	10.60	0.60
.............................................................................TATCCCAGCCATTTTGACGAGT..........................	22	5	92.80	0.20	29.40	63.20	0.00
...............................................................................TCACAGCCATTTTGACGAGT..........................	20	5	90.20	0.60	31.80	57.80	0.00
.............................................................................TATCACAGCCATTTTGACGAGTA.........................	23	5	88.60	0.60	70.20	17.20	0.60
.............................................................................TATCACAGTCATTTTGACGAGT..........................	22	5	87.40	0.60	33.00	53.60	0.20
.............................................................................TATCACAGCCAxxTTGACGAGT..........................	20	3	144.67	2.00	46.67	95.33	0.67
.............................................................................TATCACAGCCATTTTCACGAGT..........................	22	5	85.40	1.20	32.40	51.00	0.80
.............................................................................TATCACAGCCATTTTGACGAGTTG........................	24	5	84.40	0.40	53.40	18.80	11.80
..................................GCGTCAAAATGACTGTGAGCTATG...................................................................	24	2	211.00	61.00	111.50	37.50	1.00
.............................................................................TCTCACAGCCATTTTGACGAGT..........................	22	5	80.00	0.40	24.40	55.20	0.00
.............................................................................TATCACAGCTATTTTGACGAGT..........................	22	5	79.00	0.60	32.40	45.80	0.20
..............................................................................ATCACAGCCATTTTGACGAGTT.........................	22	5	78.20	1.80	55.40	20.60	0.40
.............................................................................TATCACAGCCATTTTGACGACT..........................	22	5	74.00	0.40	31.20	42.20	0.20
.............................................................................TATCACAGCCATTTTGACGATT..........................	22	5	73.60	0.00	42.80	30.40	0.40
.............................................................................TGTCACAGCCATTTTGACGAGT..........................	22	5	73.20	0.40	33.00	39.20	0.60
............................................................................ATATCACAGCCATTTTGACGAG...........................	22	5	66.80	0.00	30.40	32.60	3.80
.............................................................................TATCACGGCCATTTTGATGAGTT.........................	23	5	64.20	2.60	9.00	49.80	2.80
.............................................................................TATCACAGCCATTTTGACGATTT.........................	23	5	57.60	1.00	44.60	12.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGTAA........................	24	3	94.33	0.33	91.33	2.67	0.00
...............................................................................TATCAGCCATTTTGACGAGT..........................	20	3	88.67	0.67	46.00	42.00	0.00
.............................................................................TATCACATCCATTTTGATGAGTT.........................	23	5	51.00	0.00	46.20	4.80	0.00
.............................................................................TATCACAGCCATTTTGACTAGTT.........................	23	5	46.40	0.40	40.40	4.40	1.20
.............................................................................TATCACAGCCATTTTGACGAGTTCC.......................	25	5	46.20	1.60	1.00	42.80	0.80
................................................................................CACAGCCATTTTGACGAGT..........................	19	5	45.40	0.60	6.00	38.80	0.00
.............................................................................TATCACAGCCAATTTGACGAGT..........................	22	5	43.00	0.60	5.00	37.40	0.00
.............................................................................TATCACAGACATTTTGACGAGTT.........................	23	5	42.20	0.00	27.80	14.00	0.40
.............................................................................TATCACAGCCATATTGACGAGT..........................	22	5	41.00	0.00	11.40	27.00	2.60
.............................................................................TATCACAGCAATTTTGACGAGTT.........................	23	5	40.00	0.20	23.80	16.00	0.00
.............................................................................TATCACAGCCATTTTGACGTGT..........................	22	5	38.00	0.00	16.00	22.00	0.00
.............................................................................TATCACAGCCATTTTTACGAGTT.........................	23	5	37.80	0.00	35.60	2.00	0.20
.............................................................................TATAACAGCCATTTTGACGAGTT.........................	23	5	36.60	0.00	22.20	14.40	0.00
.............................................................................TATCACCGCCATTTTGACGAGT..........................	22	5	36.20	0.20	25.40	10.60	0.00
.............................................................................TATCACAGCCATTTAGACGAGT..........................	22	5	35.20	0.00	5.00	30.20	0.00
.............................................................................TATCACAGCCATTTTGAAGAGTT.........................	23	5	34.00	0.00	14.20	19.80	0.00
.............................................................................TATCACAGCCATTTTGTCGAGT..........................	22	5	33.60	0.40	11.40	21.80	0.00
.................................................................................ACAGCCATTTTGACGAGTT.........................	19	5	33.20	1.40	24.40	5.60	1.80
.............................................................................TAACACAGCCATTTTGACGAGT..........................	22	5	32.80	0.40	10.20	22.00	0.20
.............................................................................CATCACAGCCATTTTGACGAGTT.........................	23	5	32.40	0.00	17.60	14.80	0.00
.............................................................................TATCACAGCCATTTTGACGAGTC.........................	23	5	32.00	1.80	20.40	9.20	0.60
.............................................................................TATCGCAGCCATTTTGACGAGTT.........................	23	5	32.00	0.60	23.80	7.40	0.20
.............................................................................TATCACAGCCATTTTGATGAGCT.........................	23	5	31.60	0.20	23.20	8.20	0.00
.............................................................................TATCACAGCCATTTTGACGAGCT.........................	23	5	29.60	1.80	20.60	7.00	0.20
.............................................................................TATCACAGCCATTTTGACGAGTTAG.......................	25	3	49.00	0.00	48.33	0.67	0.00
.............................................................................TATCACAGCCATTTTGGCGAGTT.........................	23	5	29.00	1.00	21.00	6.80	0.20
.............................................................................TATCACAGCCATTTTGACGAC...........................	21	5	28.60	0.20	1.00	3.80	23.60
.............................................................................TATCACACCCATTTTGACGAGTT.........................	23	5	27.20	1.00	19.20	7.00	0.00
............................................................................CTATCACAGCCATTTTGACGAGTT.........................	24	5	26.80	0.20	21.20	5.40	0.00
.............................................................................TACCACAGCCATTTTGACGAGTT.........................	23	5	26.60	0.60	17.40	8.60	0.00
.............................................................................TATCACAGCCATTATGACGAGT..........................	22	5	26.20	0.40	5.80	19.80	0.20

droVir3

GCTG---CCAATGCT---------CCATATTGGCGCGTCAAAATGACTGTGAGCTATGTTGTTGCATTTGCCATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCC-----------A	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
.............................................................................TATCACAGCCATTTTGACGAGT..........................	22	5	13822.60	4317.20	6646.20	2695.80	34.20	129.20
.............................................................................TATCACAGCCATTTTGACGAGTT.........................	23	5	6459.80	2722.20	2678.80	1009.80	11.40	37.60
.............................................................................TATCACAGCCATTTTGATGAGTT.........................	23	5	1574.00	70.00	1128.80	370.00	0.40	4.80
.............................................................................TATCACAGCCATTTTGACGAGTTT........................	24	5	776.00	501.80	193.80	79.60	0.20	0.60
.............................................................................TATCACAGCCATTTTGACGAG...........................	21	5	643.60	125.60	296.40	110.20	26.20	85.20
.............................................................................TATCACAGCCATTTTGATGAGT..........................	22	5	579.20	15.20	530.60	25.60	0.00	7.80
.............................................................................TATCACAGCCATTTTGACGAGTTC........................	24	5	193.20	152.80	23.40	14.20	2.20	0.60
.............................................................................TATCACAGCCATTTTGACGAGTTA........................	24	5	157.20	40.00	29.20	86.60	0.20	1.20
.............................................................................TATCACAGCCATTTTGACGCGT..........................	22	5	125.60	2.80	94.40	28.00	0.20	0.20
.................................................................................ACAGCCATTTTGACGAGT..........................	18	5	111.00	4.00	77.20	29.60	0.00	0.20
.............................................................................TATCACAGCCATTTTGACGAGC..........................	22	5	89.20	10.00	64.80	6.00	1.20	7.20
.............................................................................TATCACAGCCATTTTGACGAGTTAA.......................	25	3	142.00	19.33	6.67	115.67	0.33	0.00
..................................GCGTCAAAATGACTGTGAGCTATG...................................................................	24	2	202.50	131.00	43.50	27.00	1.00	0.00
.............................................................................TATCACAGCCATTTTGACGCGTT.........................	23	5	71.20	1.80	55.60	13.60	0.20	0.00
.............................................................................TATCACAGCCATTTTGACG.............................	19	5	59.40	0.20	9.00	0.60	7.00	42.60
.............................................................................TATCACAGCCATTTTGACGA............................	20	5	57.20	10.60	33.40	4.60	1.40	7.20
.............................................................................TATCACAGCCATTTTTACGAGT..........................	22	5	56.40	1.80	12.20	42.20	0.00	0.20
.............................................................................TATCACAGCCATTTTGATGAG...........................	21	5	55.00	1.60	39.00	1.80	0.40	12.20
.............................................................................TAGCACAGCCATTTTGACGAGT..........................	22	5	52.20	0.60	48.80	2.80	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGG..........................	22	5	48.80	11.00	14.80	9.80	1.80	11.40
.................................................................................ACAGCCATTTTGACGAGTT.........................	19	5	44.20	2.80	31.40	9.80	0.00	0.20
.............................................................................TATCACAGCCATTTTGACTAGT..........................	22	5	42.20	5.20	11.60	25.00	0.00	0.40
.............................................................................TATCACAGCCCTTTTGACGAGT..........................	22	5	39.00	4.60	13.20	21.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGTC.........................	23	5	37.40	22.80	8.00	5.20	0.40	1.00
.............................................................................TATCACAGCCATTTTGACGAGA..........................	22	5	36.60	9.40	19.60	6.60	0.40	0.60
.............................................................................TATCACAGCCATTTTGCCGAGT..........................	22	5	36.00	1.80	25.40	8.80	0.00	0.00
.............................................................................TATCACAGCCATTTTGATGAGTTT........................	24	5	34.00	3.20	27.40	3.20	0.00	0.20
.............................................................................TATCACATCCATTTTGACGAGT..........................	22	5	32.40	5.80	11.40	15.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGCT.........................	23	5	29.40	2.60	21.60	5.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGATT..........................	22	5	28.20	1.20	11.00	16.00	0.00	0.00
.............................................................................TATCACAGCCATTTTCACGAGT..........................	22	5	26.60	4.00	16.60	6.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGTGT..........................	22	5	26.20	1.00	21.20	4.00	0.00	0.00
.............................................................................TATCACAGCCAGTTTGACGAGT..........................	22	5	24.80	0.40	20.20	4.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGACT..........................	22	5	24.20	1.80	16.60	5.80	0.00	0.00
.............................................................................TATCACAGCCATTTTTACGAGTT.........................	23	5	22.20	1.20	5.00	16.00	0.00	0.00
.............................................................................TATCACAGACATTTTGACGAGT..........................	22	5	22.00	0.20	15.80	6.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGTA.........................	23	5	21.80	11.20	5.20	5.00	0.00	0.40
.............................................................................TATCACAGCCGTTTTGACGAGT..........................	22	5	20.40	2.00	13.80	4.20	0.00	0.40
.................................................................................ACAGCCATTTTGATGAGTT.........................	19	5	19.60	0.00	15.00	4.40	0.20	0.00
.............................................................................TAGCACAGCCATTTTGACGAGTT.........................	23	5	19.60	0.60	18.20	0.80	0.00	0.00
.............................................................................TATCACAGCCATTTTGTCGAGT..........................	22	5	18.80	1.00	16.00	1.80	0.00	0.00
.............................................................................TATCACAGCCATTTTGACAAGT..........................	22	5	18.40	3.80	9.40	5.20	0.00	0.00
.............................................................................TATCACAGCCCTTTTGACGAGTT.........................	23	5	17.80	3.80	4.80	9.20	0.00	0.00
.............................................................................CATCACAGCCATTTTGACGAGT..........................	22	5	17.80	4.00	10.20	3.20	0.20	0.20
.............................................................................TATCACAGCCATTTTGACGAGTTG........................	24	5	16.80	2.80	5.40	5.80	0.80	2.00
.............................................................................TATCACAGCCATTTCGACGAGT..........................	22	5	16.60	7.00	6.00	3.60	0.00	0.00
.............................................................................TATCACAGCCATTTTGGCGAGT..........................	22	5	16.20	4.20	6.60	5.20	0.00	0.20
.............................................................................TATCACAGCCACTTTGACGAGT..........................	22	5	15.80	4.20	7.00	4.60	0.00	0.00
.............................................................................TATCACAGCCATCTTGACGAGT..........................	22	5	15.40	3.80	6.20	5.20	0.20	0.00
.............................................................................TATCACAGCCATTTTGACGAGTTAAA......................	26	2	37.50	1.00	0.00	36.50	0.00	0.00
.............................................................................TACCACAGCCATTTTGACGAGT..........................	22	5	15.00	3.40	6.20	5.40	0.00	0.00
.............................................................................TATCGCAGCCATTTTGACGAGT..........................	22	5	15.00	4.40	7.60	3.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGCCGAGTT.........................	23	5	14.80	2.00	8.00	4.80	0.00	0.00
.............................................................................TATCACACCCATTTTGACGAGT..........................	22	5	14.80	4.40	3.60	6.80	0.00	0.00
.............................................................................TATCACAGCCATTTTAACGAGT..........................	22	5	14.40	3.40	7.40	3.40	0.20	0.00
.............................................................................TATCACAGCCATTTTGACTAGTT.........................	23	5	14.40	1.20	3.40	9.20	0.00	0.60
.............................................................................TATCACAGCCATTTTGACGGGT..........................	22	5	14.20	3.80	8.00	2.40	0.00	0.00
.............................................................................TATCACGGCCATTTTGATGAGTT.........................	23	5	14.00	0.20	13.00	0.80	0.00	0.00
.............................................................................TATCACAGCCATTCTGACGAGT..........................	22	5	13.80	2.80	8.80	2.20	0.00	0.00
.............................................................................TATCACAGTCATTTTGACGAGT..........................	22	5	13.80	1.60	10.00	2.00	0.20	0.00
.............................................................................TATCACAGCCATGTTGACGAGT..........................	22	5	13.80	0.00	12.00	1.80	0.00	0.00
.............................................................................TATCACAGCCATTTTGATGCGTT.........................	23	5	13.80	0.00	11.60	2.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGAGGT.........................	23	5	13.60	4.60	5.40	3.60	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGTGTT.........................	23	5	13.40	0.20	11.00	2.20	0.00	0.00
............................................................................CTATCACAGCCATTTTGACGAGT..........................	23	5	13.40	3.60	6.00	3.80	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGATTT.........................	23	5	13.40	2.80	4.80	5.80	0.00	0.00
.............................................................................TATCACGGCCATTTTGACGAGT..........................	22	5	13.20	2.60	7.00	3.40	0.00	0.20
.............................................................................TATCACAGCCATTTTGACGAGTAA........................	24	3	21.67	5.67	1.67	14.00	0.00	0.33
.............................................................................TATCACAGCCATTTTGATGAGCT.........................	23	5	13.00	0.00	10.40	2.60	0.00	0.00
.............................................................................TATCACAGCCATTTTGACCAGT..........................	22	5	13.00	2.80	4.40	5.60	0.00	0.20
.............................................................................TATCACATCCATTTTGACGAGTT.........................	23	5	12.80	2.20	4.40	6.00	0.00	0.20
.............................................................................TATCACAGCCATTTTGACGCGC..........................	22	3	19.33	0.00	17.67	1.67	0.00	0.00
.............................................................................TATCACAGCCTTTTTGACGAGT..........................	22	5	11.60	0.80	9.80	1.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGAAGAGT..........................	22	5	11.40	5.00	4.80	1.60	0.00	0.00
.............................................................................TATCACCGCCATTTTGACGAGT..........................	22	5	11.00	0.60	7.00	3.40	0.00	0.00
.............................................................................TATCACAGCCATTTTGATGAGTTC........................	24	5	11.00	6.60	1.40	3.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGTCGAGTT.........................	23	5	10.80	0.20	9.00	1.60	0.00	0.00
.............................................................................GATCACAGCCATTTTGACGAGT..........................	22	5	10.80	3.60	3.40	3.60	0.20	0.00
.............................................................................TATCACAGCCATTTTGATTAGTT.........................	23	5	10.40	0.00	1.80	8.60	0.00	0.00
.............................................................................TATCAAAGCCATTTTGACGAGT..........................	22	5	10.40	1.20	7.60	1.60	0.00	0.00
............................................................................CTATCACAGCCATTTTGACGAGTT.........................	24	5	9.60	2.00	4.40	3.20	0.00	0.00
.............................................................................CATCACAGCCATTTTGACGAGTT.........................	23	5	9.40	2.20	5.20	2.00	0.00	0.00
..................................GCGTCAAAATGACTGTGAGCT......................................................................	21	2	23.50	7.50	2.50	0.00	1.00	12.50
.............................................................................TATCACAGCCATTTTCACGAGTT.........................	23	5	9.40	1.60	4.60	3.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGATG.............................	19	5	9.20	0.00	2.20	0.00	0.00	7.00
.............................................................................TGTCACAGCCATTTTGACGAGT..........................	22	5	8.80	2.40	4.60	1.80	0.00	0.00
.............................................................................TATAACAGCCATTTTGACGAGT..........................	22	5	8.80	0.80	5.80	2.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGGCGAGTT.........................	23	5	8.80	2.00	4.20	2.60	0.00	0.00
.............................................................................TATCACGGCCATTTTGATGAGT..........................	22	5	8.80	0.20	8.60	0.00	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGGGTT.........................	23	5	8.60	3.40	3.40	1.80	0.00	0.00
.............................................................................TATCACAACCATTTTGACGAGT..........................	22	5	8.60	1.60	4.40	2.60	0.00	0.00
.............................................................................TATCACAGCTATTTTGACGAGT..........................	22	5	8.60	2.40	4.80	1.40	0.00	0.00
.............................................................................TATCACAGCCATTTTGACAAGTT.........................	23	5	8.20	2.60	2.80	2.80	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGACTT.........................	23	5	8.20	2.00	4.80	1.40	0.00	0.00
.................................................................................ACAGCCATTTTGATGAGT..........................	18	5	8.00	0.00	7.80	0.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGCTGAGTT.........................	23	5	8.00	0.00	4.40	3.60	0.00	0.00
.............................................................................TATCACAGCCAGTTTGACGAGTT.........................	23	5	7.80	0.20	6.20	1.40	0.00	0.00
.............................................................................TATCACAGCAATTTTGACGAGT..........................	22	5	7.80	0.80	5.60	1.40	0.00	0.00
.............................................................................TACCACAGCCATTTTGACGAGTT.........................	23	5	7.60	2.80	2.60	2.20	0.00	0.00
.............................................................................TATCACAGCCATTTTAACGAGTT.........................	23	5	7.60	2.00	4.40	1.20	0.00	0.00
.............................................................................TATCACAGCCATTTTGACGCG...........................	21	5	7.40	0.20	6.20	0.80	0.00	0.20

droMoj3

TCCT---CTAATGCT---------CCATATTTGCGCGTCAAATTGACTGTGAGCTATGTTT----ATGAGATTATCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCC-ACCAACTGCAA	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
.............................................................................TATCACAGCCATTTTGACGAGT..........................	22	5	45481.40	9241.60	10887.80	8710.40	16641.60
.............................................................................TATCACAGCCATTTTGACGAGTT.........................	23	5	10026.00	3009.00	2369.20	1745.60	2902.20
.............................................................................TATCACAGCCATTTTGATGAGTT.........................	23	5	4757.20	113.80	1503.60	829.00	2310.80
.............................................................................TATCACAGCCATTTTGACGAG...........................	21	5	2052.00	220.20	301.00	226.40	1304.40
.............................................................................TATCACAGCCATTTTGATGAGT..........................	22	5	774.00	29.00	344.20	214.00	186.80
.............................................................................TATCACAGCCATTTTGACGAGTTT........................	24	5	759.00	381.80	177.80	122.60	76.80
..............................................................................ATCACAGCCATTTTGACGAGTT.........................	22	5	749.00	251.40	187.80	119.40	190.40
..............................................................................ATCACAGCCATTTTGACGAGT..........................	21	5	584.20	195.00	158.80	127.40	103.00
.................................................................................ACAGCCATTTTGACGAGT..........................	18	5	408.00	4.00	127.00	89.00	188.00
.............................................................................TATCACAGCCCTTTTGACGAGT..........................	22	5	364.20	2.20	20.60	187.80	153.60
.............................................................................TATCACAGCCATTTTGACGCGT..........................	22	5	359.20	2.00	45.40	198.40	113.40
.............................................................................TATCACAGCCATTTTGACGAGTTC........................	24	5	202.80	138.60	34.60	26.00	3.60
.............................................................................TATCACAGCCATTTTGACGAGTTA........................	24	5	182.20	35.40	16.80	11.80	118.20
.............................................................................TATCACAGCCATTTTGCCGAGT..........................	22	5	150.60	1.80	46.60	63.00	39.20
.............................................................................TATCACAGCCATTTTGACGA............................	20	5	143.20	24.00	32.40	29.00	57.80
.............................................................................TATCACAGCCATTTTGACGAGC..........................	22	5	131.60	12.80	60.60	26.40	31.80
.............................................................................TATCACAGCCATTTTTACGAGT..........................	22	5	118.40	9.20	20.40	67.00	21.80
..............................................................................ATCACAGCCATTTTGACGAGTTT........................	23	5	118.00	62.40	28.40	19.40	7.80
.............................................................................TATCACAGACATTTTGACGAGT..........................	22	5	113.20	2.80	17.20	10.60	82.60
.............................................................................TAGCACAGCCATTTTGACGAGT..........................	22	5	108.20	0.60	48.40	38.60	20.60
.............................................................................TATCACAGCCATTTTGATGAGTTT........................	24	5	98.60	5.00	52.80	24.40	16.40
.............................................................................TATCACAGCCATTTTGACGCGTT.........................	23	5	92.00	1.00	13.60	48.40	29.00
.............................................................................TATCACAGCCATTTTGACTAGT..........................	22	5	90.00	17.80	18.80	41.00	12.40
.............................................................................TATCACAGCCATTTTGACGAGTC.........................	23	5	77.60	40.60	17.80	11.80	7.40
.............................................................................TATCACAGCCATTTTGACGAGG..........................	22	5	76.20	3.40	15.60	15.20	42.00
.................................................................................ACAGCCATTTTGACGAGTT.........................	19	5	75.60	1.00	26.80	23.20	24.60
.............................................................................TATCACAGCCGTTTTGACGAGT..........................	22	5	74.40	3.20	25.00	16.80	29.40
.............................................................................TATCACAGCCCTTTTGACGAGTT.........................	23	5	70.40	1.00	4.20	34.80	30.40
.............................................................................TATCACAGCCATTTTGGCGAGT..........................	22	5	68.40	4.60	15.00	14.20	34.60
.............................................................................TATCACAGCCATTTTGACGAGA..........................	22	5	64.40	10.80	19.00	10.40	24.20
.............................................................................TATCACAGCCATTTTGACGTGT..........................	22	5	63.20	1.00	24.40	15.40	22.40
.............................................................................TATCACAGCCAGTTTGACGAGT..........................	22	5	63.20	0.40	28.40	15.60	18.80
.............................................................................TATCACAGCCATTTTGACGAGTA.........................	23	5	62.80	11.00	8.00	8.00	35.80
.............................................................................TATCACAGCCATTTTGTCGAGT..........................	22	5	61.80	1.40	26.80	12.20	21.40
.............................................................................TATCACAGCCATTTTGACGGGT..........................	22	5	61.20	4.40	17.00	12.40	27.40
.............................................................................TATCACAGCCATTTTGACGAGTTAA.......................	25	3	101.67	13.67	3.00	1.00	84.00
.............................................................................TATCACAGCCATTTTGACGATT..........................	22	5	59.00	2.80	16.20	32.60	7.40
.............................................................................TATCACAGCCATTTTCACGAGT..........................	22	5	53.20	1.20	24.20	20.20	7.60
.............................................................................TATCACATCCATTTTGACGAGT..........................	22	5	51.40	24.20	4.80	14.20	8.20
.............................................................................TATCGCAGCCATTTTGACGAGT..........................	22	5	51.00	5.80	14.00	11.60	19.60
.............................................................................TATCACAGCCATTTTGATGAG...........................	21	5	50.80	3.20	24.00	18.00	5.60
.............................................................................TATCACAGTCATTTTGACGAGT..........................	22	5	49.40	4.60	11.00	9.40	24.40
.............................................................................TATCACGGCCATTTTGACGAGT..........................	22	5	48.80	4.20	15.20	9.80	19.60
.............................................................................TACCACAGCCATTTTGACGAGT..........................	22	5	48.60	7.00	14.80	10.00	16.80
.............................................................................TATCACAGCCATTTTAACGAGT..........................	22	5	47.80	2.40	16.20	16.80	12.40
.............................................................................TATCACAGCCATTTTGACAAGT..........................	22	5	47.00	6.60	10.40	12.80	17.20
.................................................................................ACAGCCATTTTGATGAGTT.........................	19	5	46.80	0.00	19.00	9.40	18.40
............................................................................CTATCACAGCCATTTTGACGAGT..........................	23	5	46.40	1.60	8.80	9.20	26.80
.............................................................................TATCACAGCCACTTTGACGAGT..........................	22	5	45.80	3.00	13.40	13.00	16.40
.............................................................................TATCACAGCCCTTTTGACGCGT..........................	22	3	75.33	0.00	1.67	56.00	17.67
.............................................................................TATCACAGCCATTTCGACGAGT..........................	22	5	45.00	4.40	16.00	10.60	14.00
..................................GCGTCAAATTGACTGTGAGCTATG...................................................................	24	2	110.50	73.00	15.50	13.00	9.00
.............................................................................CATCACAGCCATTTTGACGAGT..........................	22	5	42.40	4.20	15.00	10.40	12.80
.............................................................................TATCACAGCCATTTTGCTGAGTT.........................	23	5	41.80	0.00	11.80	14.00	16.00
.............................................................................TATCACAGCCATCTTGACGAGT..........................	22	5	41.40	4.40	13.20	9.20	14.60
.............................................................................TATCACAGCCATTTTGACGAGCT.........................	23	5	40.80	2.00	13.40	12.00	13.40
.............................................................................TATCACAGCCATTTTGAAGAGT..........................	22	5	38.80	2.20	7.40	11.00	18.20
.............................................................................TATCACAGCCATTTTGACGAGTAA........................	24	3	62.33	10.33	2.67	2.67	46.67
.............................................................................TATAACAGCCATTTTGACGAGT..........................	22	5	35.80	4.40	12.00	7.60	11.80
.............................................................................TGTCACAGCCATTTTGACGAGT..........................	22	5	33.00	1.20	7.00	11.00	13.80
..............................................................................ATCACAGCCATTTTGACGAG...........................	20	5	32.40	4.20	5.40	6.60	16.20
.............................................................................TATCACAGCAATTTTGACGAGT..........................	22	5	29.20	3.40	9.60	5.00	11.20
.............................................................................TATCACAGCCATTTTGCCGAGTT.........................	23	5	28.80	0.60	10.60	11.60	6.00
.............................................................................TATCACAGCCTTTTTGACGAGT..........................	22	5	28.00	0.00	10.60	6.00	11.40
.............................................................................TATCACAGACATTTTGACGAGTT.........................	23	5	27.60	0.80	4.20	3.60	19.00
.............................................................................TATCACAGCCATTTTGATGAGCT.........................	23	5	27.20	0.20	8.00	5.20	13.80
.............................................................................TATCACAGCCATTCTGACGAGT..........................	22	5	27.00	2.00	10.60	7.80	6.60
.............................................................................TATCATAGCCATTTTGACGAGT..........................	22	5	26.20	3.40	9.60	3.40	9.80
..............................................................................ATCACAGCCATTTTGACGAGTTA........................	23	5	26.00	3.40	1.20	1.40	20.00
.............................................................................TATCACAGCCATTTTTACGAGTT.........................	23	5	26.00	1.80	3.60	16.40	4.20
.............................................................................TATCACAGCCATTTTGATGCGTT.........................	23	5	26.00	0.00	5.40	10.60	10.00
.............................................................................TATCACAGCTATTTTGACGAGT..........................	22	5	25.60	3.60	6.60	4.80	10.60
.............................................................................TATCACAGCCAxTTTGACGAGT..........................	21	5	25.60	11.60	6.00	5.40	2.60
.............................................................................TCTCACAGCCATTTTGACGAGT..........................	22	5	25.00	0.80	3.40	12.40	8.40
.............................................................................TATTACAGCCATTTTGACGAGT..........................	22	5	24.80	4.40	5.20	5.20	10.00
.............................................................................TATCACAGCCATTTTGACGCG...........................	21	5	24.20	0.40	2.40	7.40	14.00
.............................................................................TATCACAGCCCTTTTGATGAGTT.........................	23	5	24.20	0.00	1.00	10.40	12.80
.............................................................................TATCAAAGCCATTTTGACGAGT..........................	22	5	24.00	0.80	5.40	3.80	14.00
.............................................................................TATCACAACCATTTTGACGAGT..........................	22	5	23.60	3.80	6.00	4.40	9.40
.............................................................................TATCCCAGCCATTTTGACGAGT..........................	22	5	23.60	0.40	7.00	7.40	8.80
.............................................................................TATCACAGCCATTTTGCCGCGT..........................	22	3	39.33	0.00	12.33	19.67	7.33
.............................................................................TATCACCGCCATTTTGACGAGT..........................	22	5	22.80	0.80	6.20	11.40	4.40
.............................................................................TATCACAGCCATTTTGACCAGT..........................	22	5	22.00	3.20	5.20	7.60	6.00
.............................................................................TATCACACCCATTTTGACGAGT..........................	22	5	22.00	6.20	5.40	5.60	4.80
.............................................................................TATCACAGCCATTTTGACGTGTT.........................	23	5	21.80	0.00	10.00	5.00	6.80
.............................................................................TAGCACAGCCATTTTGACGAGTT.........................	23	5	21.80	0.20	10.00	7.20	4.40
..............................................................................ATCACAGCCATTTTGACGAGTTC........................	23	5	21.60	12.20	5.00	3.60	0.80
.............................................................................TATCACAGCCATTTTGATTAGTT.........................	23	5	20.60	0.00	3.00	14.00	3.60
..................................GCGTCAAATTGACTGTGAGCTAT....................................................................	23	2	51.50	36.50	7.00	5.00	3.00
.............................................................................TAACACAGCCATTTTGACGAGT..........................	22	5	19.80	1.20	7.20	4.80	6.60
.............................................................................TATCACAGCCATGTTGACGAGT..........................	22	5	19.60	0.40	9.40	5.40	4.40
.............................................................................TATCACAGCCATTTTGACTAGTT.........................	23	5	19.40	3.00	3.60	9.80	3.00
.............................................................................TATCACAGCCCTTTTGACGAG...........................	21	5	18.80	0.00	0.20	6.40	12.20
.............................................................................GATCACAGCCATTTTGACGAGT..........................	22	5	18.60	1.60	6.00	6.40	4.60
.............................................................................TATCACAGCCATTGTGACGAGT..........................	22	5	18.40	0.20	8.40	5.00	4.80
.............................................................................TATCACAGCCATTTTGACGATTT.........................	23	5	18.40	3.60	3.80	9.40	1.60
.............................................................................TATCACAGCCATTTTGACGACT..........................	22	5	18.40	2.40	7.00	3.20	5.80
.............................................................................TATCACAGCCATTTTGACGAAT..........................	22	5	18.00	1.60	3.60	5.80	7.00
.............................................................................TATCACAGACATTTTGATGAGTT.........................	23	5	17.60	0.00	2.20	1.60	13.80
.............................................................................TATCACAGCCATTTTGACGAGGT.........................	23	5	17.60	0.40	1.80	4.40	11.00
.............................................................................AATCACAGCCATTTTGACGAGT..........................	22	5	17.40	0.60	5.40	3.60	7.80

droGri2

GCTA---TCAGTGCT---------CCATATTGGCGCGTCAAATTGACTGTGAGCTATGTTGTTGCAGTTGTAATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCC-----------A	Size	Hit Count	Total Norm	V109 Male body
.............................................................................TATCACAGCCATTTTGACGAGTT.........................	23	5	1381.80	1381.80
.............................................................................TATCACAGCCATTTTGACGAGT..........................	22	5	570.20	570.20
.............................................................................TATCACAGCCATTTTGACGAGTTT........................	24	5	217.60	217.60
.............................................................................TATCACAGCCATTTTGATGAGTT.........................	23	5	32.40	32.40
.............................................................................TATCACAGCCATTTTGACGAGTTA........................	24	5	15.20	15.20
.............................................................................TATCACAGCCATTTTGAAGAGTT.........................	23	5	13.00	13.00
.............................................................................TATCACAGCCATTTTGACGAGTC.........................	23	5	11.20	11.20
.............................................................................TATCACAGCCATTTTGACGAG...........................	21	5	10.20	10.20
..................................GCGTCAAATTGACTGTGAGCTATG...................................................................	24	2	22.50	22.50
.............................................................................TATCACAGCCATTTTGAGGAGTT.........................	23	5	9.00	9.00
.............................................................................TATCACAGCCATTTTGATGAGT..........................	22	5	7.20	7.20
.............................................................................TATCACAGCCATTTTGACGAGTG.........................	23	5	7.00	7.00
.............................................................................TATCACAGCCATTTTGAAGAGT..........................	22	5	6.80	6.80
.............................................................................TATCACAGCCATTTTGACGAGTA.........................	23	5	5.40	5.40
.............................................................................TATCACAGACATTTTGACGAGTT.........................	23	5	5.00	5.00
.............................................................................TACCACAGCCATTTTGACGAGTT.........................	23	5	4.80	4.80
.............................................................................TATCAAAGCCATTTTGACGAGTT.........................	23	5	4.60	4.60
.............................................................................TATCACCGCCATTTTGACGAGTT.........................	23	5	4.20	4.20
.............................................................................TATCACAGCCATTTTGAAGAGTTT........................	24	5	3.20	3.20
.............................................................................TATCACGGCCATTTTGACGAGTT.........................	23	5	3.20	3.20
.............................................................................TAACACAGCCATTTTGACGAGTT.........................	23	5	3.00	3.00
.............................................................................TATCACAGCCATTTTGAGGAGT..........................	22	5	3.00	3.00
.............................................................................TATCACAGTCATTTTGACGAGTT.........................	23	5	2.80	2.80
.............................................................................TATCACCGCCATTTTGACGAGT..........................	22	5	2.80	2.80
.............................................................................TATCAGAGCCATTTTGACGAGTT.........................	23	5	2.80	2.80
.............................................................................TATCACAGCCATTTTGACGATTT.........................	23	5	2.60	2.60
.............................................................................TATCACAGCCATTTTGACGCGTT.........................	23	5	2.40	2.40
.............................................................................TATCACTGCCATTTTGACGAGTT.........................	23	5	2.40	2.40
.............................................................................TATCACATCCATTTTGACGAGTT.........................	23	5	2.20	2.20
.............................................................................TATCATAGCCATTTTGACGAGTT.........................	23	5	2.20	2.20
.............................................................................TATCACAGCCATTTTGCCGAGTT.........................	23	5	2.20	2.20
.............................................................................TATCACAGCCCTTTTGACGAGTT.........................	23	5	2.20	2.20
.............................................................................TATCAAAGCCATTTTGACGAGT..........................	22	5	2.20	2.20
.............................................................................TATCACAGCCATTTTGACGAGCT.........................	23	5	2.00	2.00
.............................................................................TATCACAGCCATTTTGACGAGTTAA.......................	25	3	3.00	3.00
.............................................................................TATCACAGCCATTTTGACGAGTGT........................	24	5	1.80	1.80
.............................................................................TACCACAGCCATTTTGACGAGT..........................	22	5	1.80	1.80
.............................................................................TATCACAGCCATTTTGATGAGTTT........................	24	5	1.60	1.60
.............................................................................TATCACAGCCATTTTGACGAGTAT........................	24	5	1.60	1.60
.............................................................................TATCACACCCATTTTGACGAGTT.........................	23	5	1.60	1.60
.............................................................................TATCACAGGCATTTTGACGAGTT.........................	23	5	1.60	1.60
.............................................................................TATCACAGCCATTTTGACGAGTCT........................	24	5	1.60	1.60
.............................................................................TAGCACAGCCATTTTGACGAGTT.........................	23	5	1.60	1.60
.............................................................................TATCACAGCCATTTTGAGGAGTTT........................	24	5	1.40	1.40
.................................................................................ACAGCCATTTTGACGAGTT.........................	19	5	1.40	1.40
.............................................................................TATCACAGCCATTTCGACGAGTT.........................	23	5	1.40	1.40
.............................................................................TATCACAGCCATTTTGACCAGTT.........................	23	5	1.40	1.40
.............................................................................TATCACAGCCATTTTGACGAGTTTT.......................	25	5	1.40	1.40
.............................................................................TATCACAGCCACTTTGACGAGTT.........................	23	5	1.20	1.20
.............................................................................TATCACAGCAATTTTGACGAGTT.........................	23	5	1.20	1.20
.............................................................................TATCACAGCCATCTTGACGAGTT.........................	23	5	1.20	1.20
.............................................................................TATCACAGCCATTTTAACGAGTT.........................	23	5	1.20	1.20
.............................................................................TAGCACAGCCATTTTGACGAGT..........................	22	5	1.20	1.20
.............................................................................TATCACAGCCATTTTGACAAGTT.........................	23	5	1.20	1.20
.............................................................................TATCACGGCCATTTTGACGAGT..........................	22	5	1.20	1.20
.............................................................................TATCACAGCCATTTTGACGCGT..........................	22	5	1.00	1.00
.............................................................................CATCACAGCCATTTTGACGAGTT.........................	23	5	1.00	1.00
.............................................................................TATCACAGCCATTTTGACTAGT..........................	22	5	1.00	1.00
.............................................................................TATCACAGTCATTTTGACGAGT..........................	22	5	1.00	1.00
.............................................................................TCTCACAGCCATTTTGACGAGTT.........................	23	5	1.00	1.00
.............................................................................TATCACAGACATTTTGACGAGT..........................	22	5	1.00	1.00
.............................................................................TATCACAGCCATTTTCACGAGTT.........................	23	5	1.00	1.00
.............................................................................TATCAGAGCCATTTTGACGAGTTT........................	24	5	1.00	1.00
.............................................................................TATCACAACCATTTTGACGAGTT.........................	23	5	0.80	0.80
.............................................................................TATTACAGCCATTTTGACGAGTT.........................	23	5	0.80	0.80
.............................................................................TATCACAGTCATTTTGACGAGTTT........................	24	5	0.80	0.80
.............................................................................TATCACCGCCATTTTGACGAGTTT........................	24	5	0.80	0.80
.............................................................................TATCATAGCCATTTTGACGAGT..........................	22	5	0.80	0.80
.............................................................................TATAACAGCCATTTTGACGAGT..........................	22	5	0.80	0.80
.............................................................................TATCACAGCCATTTTGACGCGTTT........................	24	5	0.80	0.80
.............................................................................TATCACAGCCATTTTGACGACTT.........................	23	5	0.80	0.80
.............................................................................TATCACAGCCATTTTGGCGAGTT.........................	23	5	0.80	0.80
.............................................................................TATCCCAGCCATTTTGACGAGT..........................	22	5	0.80	0.80
.............................................................................TATCACACCCATTTTGACGAGT..........................	22	5	0.80	0.80
.............................................................................TATAACAGCCATTTTGACGAGTT.........................	23	5	0.80	0.80
.............................................................................TATCACAGCCATTTTGACGGGTT.........................	23	5	0.80	0.80
.............................................................................TATCGCAGCCATTTTGACGAGTT.........................	23	5	0.80	0.80
.............................................................................TATCACAGCCATTCTGACGAGTT.........................	23	5	0.80	0.80
.............................................................................TATCACAGCCATTTTTACGAGTT.........................	23	5	0.80	0.80
............................................................................CTATCACAGCCATTTTGACGAGTT.........................	24	5	0.80	0.80
..........................................................TTGTTGCAGTTGTAATTCA................................................	19	2	2.00	2.00
.............................................................................TATCAGAGCCATTTTGACGAGT..........................	22	5	0.80	0.80
............................................................................CTATCACAGCCATTTTGACGAGT..........................	23	5	0.60	0.60
.............................................................................TATCACAGCCATTTTGACGAGTTG........................	24	5	0.60	0.60
.............................................................................TAACACAGCCATTTTGACGAGT..........................	22	5	0.60	0.60
.............................................................................TATCACAGCCATTTTGACGAGA..........................	22	5	0.60	0.60
...............................................................................TATCAGCCATTTTGACGAGTT.........................	21	3	1.00	1.00
.............................................................................TATCATAGCCATTTTGACGAGTTT........................	24	5	0.60	0.60
.............................................................................TCTCACAGCCATTTTGACGAGT..........................	22	5	0.60	0.60
..............................................................................ATCACAGCCATTTTGACGAGTT.........................	22	5	0.60	0.60
.............................................................................TATCACAGCCACTTTGACGAGT..........................	22	5	0.60	0.60
.............................................................................TAACACAGCCATTTTGACGAGTTT........................	24	5	0.60	0.60
.............................................................................TATCACAGCCATTTTGGCGAGTTT........................	24	5	0.60	0.60
.............................................................................TATCACAGCCATTTTGACGATT..........................	22	5	0.60	0.60
.............................................................................TATCACAGCCATTTTGGCGAGT..........................	22	5	0.60	0.60
.............................................................................TATCACAGCCATTTTGACGAGC..........................	22	5	0.60	0.60
.............................................................................TACCACAGCCATTTTGACGAGTTT........................	24	5	0.60	0.60
.............................................................................TATCACAGCCAxTTTGACGAGTT.........................	22	5	0.60	0.60
.................................................................................ACAGCCATTTTGACGAGT..........................	18	5	0.60	0.60
.............................................................................TATCACAGCCATTTTGCCGAGT..........................	22	5	0.60	0.60
.............................................................................TATCACAGCCATTTTGACGAGAT.........................	23	5	0.60	0.60

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image