Possible Orthologs for dme-mir-13b-2

droSim1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
5 chrX_random:2632466-2632565 + 95.06
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCTGCCTCTGCTGTCTATCAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGGCAGCCAGCCT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
............................................................TATCACAGCCATTTTGACGAGT..................2259791.008331.60960.20102.00397.20
............................................................TATCACAGCCATTTTGACGAGTT.................2353518.202829.40343.20113.40232.20
............................................................TATCACAGCCATTTTGACGAG...................2151500.60603.00714.2079.20104.20
............................................................TATCACAGCCATTTTGATGAGTT.................2351024.00970.8032.000.4020.80
............................................................TATCACAGCCATTTTGACG.....................195378.601.60350.4018.408.20
............................................................TATCACAGCCATTTTGACGAGTTA................245260.40232.402.001.0025.00
............................................................TATCACAGCCATTTTGATGAGT..................225180.60134.6039.801.205.00
............................................................TATCACAGCCATTTTGACGAGG..................225145.2025.2068.0010.2041.80
............................................................TATCACAGCCATTTTGACGAGTTAA...............253217.33169.001.000.0047.33
............................................................TATCACAGCCCTTTTGACGAGT..................22598.0097.800.200.000.00
................................................................ACAGCCATTTTGACGAGT..................18585.8078.406.400.400.60
............................................................TATCACAGCCATTTTGACGAGC..................22582.0013.6052.605.2010.60
............................................................TATCACAGCCATTTTGACGA....................20572.4019.2047.003.402.80
............................................................TATCACAGCCATTTTGATGAG...................21569.408.6058.200.801.80
............................................................TATCACAGCCATTTTGACGAGTTT................24553.4043.406.402.800.80
............................................................TATCACAGACATTTTGACGAGT..................22547.2046.600.600.000.00
............................................................TATCACAGCCATTTTGACGCGT..................22540.4040.400.000.000.00
............................................................TATCACAGCCATTTTGACGAC...................21539.200.0033.402.603.20
............................................................TATCACAGCCATTTTGACGAGTTG................24532.809.4010.400.6012.40
............................................................TATCACAGCCCTTTTGACGAGTT.................23530.8030.200.200.200.20
................................................................ACAGCCATTTTGACGAGTT.................19527.0020.001.601.603.80
............................................................TATCACAGCCATTTTGATG.....................19522.200.2021.400.600.00
............................................................TATCACAGACATTTTGACGAGTT.................23520.8020.800.000.000.00
............................................................TATCACAGCCATTTTGAC......................18519.000.0015.401.801.80
............................................................TATCACAGCCATTTTGACGCGTT.................23519.0018.800.200.000.00
............................................................TATCACAGCCATTTTGACGAGA..................22518.607.009.602.000.00
............................................................TATCACAGCCATTTTGCCGAGT..................22518.2018.200.000.000.00
......................GCGTCAAAATGACTGTGAGCT.........................................................21245.001.0027.507.009.50
............................................................TATCACAGCCATTTTGACTAG...................21517.602.6012.800.401.80
............................................................TATCACAGCCATTTTGGCGAGT..................22516.0015.200.600.200.00
............................................................TATCACAGCCATTTTGTCGAGT..................22515.8015.400.200.200.00
............................................................TAGCACAGCCATTTTGACGAGT..................22515.4015.200.200.000.00
............................................................TATCACAGCCATTTTGAAGAGT..................22515.4015.400.000.000.00
............................................................TATCACAGCCATTTTGACGTGT..................22514.8014.600.000.200.00
............................................................TATCACAGCCATTTTTACGAGT..................22514.2012.801.200.200.00
............................................................TATCACAGCCATTTTGACGAGGT.................23514.0014.000.000.000.00
...........................................................CTATCACAGCCATTTTGACGAGT..................23513.2013.200.000.000.00
............................................................TATCAAAGCCATTTTGACGAGT..................22513.2013.200.000.000.00
............................................................TATCACAGCCAGTTTGACGAGT..................22513.2013.200.000.000.00
............................................................TATCACAGCCGTTTTGACGAGT..................22513.0012.600.400.000.00
....................ACGCGTCAAAATGACTGTGAGCT.........................................................23231.000.004.000.0027.00
......................GCGTCAAAATGACTGTGAGCTATG......................................................24230.5019.504.501.505.00
............................................................TATCACAGCCATTTTGACGAGCT.................23511.8011.200.400.000.20
............................................................TATCACAGCCATTTTGACGAGTC.................23511.804.603.801.801.60
............................................................TATAACAGCCATTTTGACGAGT..................22511.8011.800.000.000.00
............................................................TATCGCAGCCATTTTGACGAGT..................22511.409.601.200.200.40
............................................................TATCACAGCCATTTTGCCGAGTT.................23510.8010.800.000.000.00
............................................................TATCACGGCCATTTTGACGAGT..................22510.208.401.800.000.00
............................................................TATCACAGCCATTTTGACGGGT..................22510.009.400.400.000.20
............................................................TATCACAGTCATTTTGACGAGT..................2259.409.200.200.000.00
............................................................TATCACAGCTATTTTGACGAGT..................2259.207.601.600.000.00
............................................................TATCACAGCCACTTTGACGAGT..................2259.209.200.000.000.00
............................................................TACCACAGCCATTTTGACGAGT..................2259.208.200.800.000.20
............................................................TATCACAGCCATTTTGACTAGT..................2259.006.202.000.200.60
............................................................CATCACAGCCATTTTGACGAGT..................2259.008.600.200.000.20
............................................................TATCACAGCCATTTCGACGAGT..................2258.608.200.200.200.00
............................................................TATCACAGCCATTTTGACGAGTA.................2358.606.601.000.400.60
................................................................ACAGCCATTTTGATGAGTT.................1958.206.601.200.000.40
............................................................TATCACAGCCATTTTGACGG....................2058.000.006.800.600.60
............................................................TATCACAGCCATTTTGATGAGCT.................2357.807.800.000.000.00
............................................................TATCACAGCCATTTTGACGAGTTTG...............25313.008.671.000.003.33
............................................................TATCACAGCCATTTTGACGTGTT.................2357.607.600.000.000.00
............................................................TATCACAGCCCTTTTGACGAG...................2157.407.400.000.000.00
............................................................TATCACAGCCATTTTGACCAGT..................2257.004.001.200.001.80
............................................................TATTACAGCCATTTTGACGAGT..................2256.806.200.400.000.20
............................................................TAACACAGCCATTTTGACGAGT..................2256.606.400.000.000.20
............................................................TATCACAGACATTTTGATGAGTT.................2356.606.600.000.000.00
............................................................TATCACAGCCATTTTGGCGAGTT.................2356.605.800.400.000.40
............................................................TATCACAGCCATCTTGACGAGT..................2256.405.800.600.000.00
............................................................TATCACATCCATTTTGACGAGT..................2256.404.001.600.200.60
............................................................TATCACAGCCATTTTGCTGAGTT.................2356.406.400.000.000.00
............................................................TATCACAGCAATTTTGACGAGT..................2256.206.200.000.000.00
...........................................................CTATCACAGCCATTTTGACGAGTT.................2456.206.000.200.000.00
............................................................TATCACAGCCATTCTGACGAGT..................2256.206.200.000.000.00
............................................................TATCACAGCCCTTTTGCCGAGT..................22310.3310.330.000.000.00
............................................................TATCACAGCCATTTTGACAAGT..................2256.005.400.200.000.40
.............................................................ATCACAGCCATTTTGACGAGTT.................2256.005.200.400.000.40
............................................................GATCACAGCCATTTTGACGAGT..................2256.005.600.200.000.20
............................................................TATCACAGCCAGTTTGACGAGG..................22310.0010.000.000.000.00
............................................................TATCACAGCCCTTTTGATGAGTT.................2356.006.000.000.000.00
............................................................TATCATAGCCATTTTGACGAGT..................2256.005.200.400.000.40
............................................................TATCACAGCCTTTTTGACGAGT..................2255.805.800.000.000.00
............................................................TATCCCAGCCATTTTGACGAGT..................2255.805.400.200.000.20
............................................................TGTCACAGCCATTTTGACGAGT..................2255.804.800.400.200.40
............................................................TATCACAGCCCTTTTGACGCGT..................2239.339.330.000.000.00
............................................................TACCACAGCCATTTTGACGAGTT.................2355.404.400.600.000.40
............................................................TATCACAGCCATTTTCACGAGT..................2255.403.601.000.000.80
............................................................TATCACAGCCATTTTGACTAGTT.................2355.402.801.200.001.40
............................................................TATCACAGTCATTTTGACGAGTT.................2355.405.200.200.000.00
............................................................TATCACAGCCATTTTGTCGAGTT.................2355.205.000.000.000.20
............................................................TATCACAGCCATTTTGACGAGTAA................2438.676.670.330.331.33
............................................................TATCACAGCCATTTTAACGAGT..................2255.204.600.600.000.00
............................................................TATCACAGCCATGTTGACGAGT..................2255.205.200.000.000.00
............................................................TATCACAGCCATTTTGATGA....................2055.200.005.200.000.00
............................................................TATCACAGACATTTTGACGAG...................2155.004.800.200.000.00
............................................................TATCAAAGCCATTTTGACGAGTT.................2355.004.800.000.000.20
............................................................TATCACAGCCATTTTGAAGAGTT.................2354.804.600.000.200.00
............................................................TATCACAGGCATTTTGACGAGT..................2254.604.400.200.000.00
............................................................TCTCACAGCCATTTTGACGAGT..................2254.604.600.000.000.00
............................................................TATCACAGCCGTTTTGACGAGTT.................2354.604.400.200.000.00
............................................................TATCACAGCCATTTTGACGAGTTC................2454.603.600.400.000.60
6 chr2L:12499891-12499992 - 43.33
TCTACCTCTGCTGTCTATTAACGCG-TCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGT-TTGTTGGACAGCCAGCCT
TCTTATCCAGTTCTGCATTTCGGCCCCCAAGACCGATGTGAGTTCAACGCAATGATCCTATTAATTCATTGTCTTTAATAATTCATGCTGAAATTGCAGATG
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
4 chrX:8525937-8526071 + 27.96
TCTACCTCTGCTGTCTATTAACGCG-------TCAAAATGACTGTGAGCTATGT-----------------GGATTTGACTTCATATCACAGCCATTTTGAC---GAGTTTGTTGGACAG--------CCAGCCT
CAAGCCCCTGGTCATCATTGCCGAGGATATCGATGGTGAGGCCCTGAGCACCCTGGTGGTGAACCGCCTCAAGATCGGCCTGCAGGTGGCTGCCGTCAAGGCACCCGGTTTCGGCGACAACCGCAAGAGCACCCT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.....................................................................CAAGATCGGCCTGCAGGT................................................1821.500.000.001.000.50
............................................................GAACCGCCTCAAGATCGGCCTGCAGGT................................................2721.000.000.000.001.00
....................................................................ACAAGATCGGCCTGAAGG.................................................1821.000.000.000.001.00
.....................................................................CAAGATCGGCCTGCAGGTGGCTGCC.........................................2521.000.000.001.000.00
............................ATCGATGGGGAGGCCCTG.........................................................................................1820.500.000.000.000.50
..................................GGTGAGGCGCTGAGCTCC...................................................................................1820.500.000.000.500.00
...................................................................CTCAAGATCGGCCTGCAGGC................................................2020.500.000.000.000.50
.........GGTCATCATTGCCGAGGAC...........................................................................................................1920.500.000.000.000.50
.................................................................................GCAGGTGGCTGCCGTCAAGGC.................................2120.500.500.000.000.00
..................TGCCGAGGATATCGATGGTGAGGCCC...........................................................................................2620.500.000.000.000.50
...................................................................CTCAAGATCGGCCTGCAGGTG...............................................2120.500.500.000.000.00
.....................................................................CAAGATCGGCCTGCAGGG................................................1820.500.000.000.000.50
............................................................GAACCGCCTCAAGATCGGCT.......................................................2020.500.000.000.000.50
...........................TTTCGATGTTGAGGCCCTG.........................................................................................1920.500.000.000.000.50
.......GTGGTCATCATTGCCGAGGAC...........................................................................................................2120.500.000.500.000.00
.............ATCATTGCCGAGGACAAC........................................................................................................1820.500.000.000.500.00
.........................GATATCGATGGTGAGGCCCTG.........................................................................................2120.500.000.500.000.00
............................ATCGATGGTGAGGCCCTGAGCAC....................................................................................2320.500.000.000.000.50
15 chr3R:18125192-18125255 - 22.86
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TGCACCATTGCCTCCCAGCAGATGCCCAAGAAGATTGTGAAC---------------------------------GCCAAGATTGCC---TGCCTAGACT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
...........................AAGAAGATCGTGAGC---------------------------------GCCA.....................1921.500.000.000.001.50
...........................AAGATGATTGTGAAC---------------------------------CCC......................1821.500.000.000.001.50
.GCTCCATTCCCTCCCAGC.................................................................................1821.000.000.001.000.00
..........................CAAGATGATTGTGAAC---------------------------------CC.......................1820.500.000.000.500.00
............................AGAAGATCGTGAGC---------------------------------GCCA.....................1820.500.000.000.000.50
......................TGCCCAAGAAGATTGTGAAC---------------------------------GCC......................2320.500.000.000.000.50
...................AGATGCCCAAGAAGATTGTGAAC---------------------------------GCC......................2620.500.000.000.000.50
..........................CAAGAAGATTGTGAAC---------------------------------GCCAAGATTGCC---G.........2920.500.000.000.500.00
...................AGATGCCCAAGAAGATTGTGAAC---------------------------------GC.......................2520.500.000.000.000.50
..........................CAAGAAGATCGTGAGC---------------------------------GC.......................1820.500.000.000.000.50
...................AGCTGCCCAAGGAGATTG...............................................................1820.500.000.500.000.00
.............CCCAGCTGCTGCCCAAGA.....................................................................1820.500.500.000.000.00
14 chr3R:16663753-16663817 - 22.55
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CCCAAATCCTATGAC------AACTGCAAAATTGCCCTGCTCAACATCGAATTGGAG-----------------------------CTAAAGGCTGAGCG
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.........................................CAACATCGAATTGGAG-----------------------------CT............1821.000.000.000.500.50
.....................AACTGCAAAATTTCTCTG.............................................................1821.000.001.000.000.00
........ATATGAA------AACTGCAAAAT....................................................................1821.000.000.000.001.00
.........................................TAACATCGAAGTGGAG-----------------------------CT............1820.500.000.000.000.50
..............C------AACTGCAAAATTGCCCTGCTCAAC.......................................................2520.500.500.000.000.00
......................................GCTCAACATCGAATTGGAG-----------------------------..............1920.500.000.000.500.00
............................................CATCGAATTGGAG-----------------------------CTAAAGGCTG....2320.500.000.000.500.00
........................................TCAACATCGAATTGGAG-----------------------------C.............1820.500.000.000.000.50
........................................TAAACATCGATTTGGAG-----------------------------CT............1920.500.000.000.500.00
..............C------AACTGCAAAATTGAACT..............................................................1820.500.000.000.000.50
........................................TTAACATCGAAGTGGAG-----------------------------C.............1820.500.000.000.000.50


droSec1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
5 super_34:345603-345702 + 94.08
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CCTGCCTCTGCTGTCTATCAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGGCAGCCAGCCT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
............................................................TATCACAGCCATTTTGACGAGT..................22550237.005085.2014813.6030338.20
............................................................TATCACAGCCATTTTGACGAGTT.................23521215.406137.208072.407005.80
............................................................TATCACAGCCATTTTGATGAGTT.................2359084.40109.206701.402273.80
............................................................TATCACAGCCATTTTGACGAG...................2152628.20140.40264.002223.80
............................................................TATCACAGCCATTTTGATGAGT..................2251218.0020.80288.60908.60
............................................................TATCACAGCCATTTTGACGAGTTT................2451172.20632.00102.20438.00
............................................................TATCACAGCCATTTTGACGAGTTA................245956.4084.20773.2099.00
............................................................TATCACAGCCATTTTGACGAGTTAA...............253701.3331.00623.0047.33
................................................................ACAGCCATTTTGACGAGT..................185272.603.00102.40167.20
............................................................TATCACAGCCATTTTGACGA....................205194.005.6011.20177.20
......................GCGTCAAAATGACTGTGAGCTATG......................................................242376.0082.00252.5041.50
............................................................TATCACAGCCATTTTGACGAGA..................225124.6012.806.80105.00
............................................................TATCACAGCCAxTTTGACGAGT..................215121.205.0085.8030.40
............................................................TATCACAGCCATTTTGATGAG...................215108.002.809.6095.60
............................................................TATCACAGCCATTTTGACTAGT..................225105.6030.2018.4057.00
............................................................TATCACAGCCATTTTGACAAGT..................225104.0034.4010.8058.80
............................................................TATCACAGCCATTTTGACGAGC..................22589.2010.0028.0051.20
............................................................TATCACAGCCATTTTGACCAGT..................22577.2041.606.8028.80
................................................................ACAGCCATTTTGACGAGTT.................19576.803.0041.4032.40
............................................................TATTACAGCCATTTTGACGAGT..................22567.802.2054.4011.20
............................................................TATCACACCCATTTTGACGAGT..................22566.005.6026.2034.20
............................................................TATCACATCCATTTTGACGAGT..................22565.606.8012.4046.40
............................................................TATCACAGCCCTTTTGACGAGT..................22563.8010.6010.4042.80
............................................................TATCACAGCCATTTTGACGAGTA.................23562.4015.0018.2029.20
............................................................TATCACAGCCATTTTGACAAGTT.................23562.0045.805.8010.40
............................................................TATCACAGCCATTTTGACG.....................19558.800.201.6057.00
................................................................ACAGCCATTTTGATGAGTT.................19558.000.0044.6013.40
............................................................TATCACAACCATTTTGACGAGT..................22557.603.208.6045.80
............................................................TATCACGGCCATTTTGACGAGT..................22555.804.6021.4029.80
............................................................TATCGCAGCCATTTTGACGAGT..................22554.803.4019.4032.00
............................................................TACCACAGCCATTTTGACGAGT..................22554.405.0021.2028.20
............................................................TATCACAGCCATTTTGACCAGTT.................23553.4045.802.205.40
............................................................TATCACAGCAATTTTGACGAGT..................22552.000.607.6043.80
...........................................................CTATCACAGCCATTTTGACGAGT..................23551.401.4016.4033.60
............................................................TATCATAGCCATTTTGACGAGT..................22551.202.2032.2016.80
............................................................TATCACAGCTATTTTGACGAGT..................22551.002.2034.4014.40
............................................................TATCACAGCCAxTTTGACGAGTT.................22547.804.8036.606.40
............................................................TATCACAGCCATTTCGACGAGT..................22546.206.2018.8021.20
............................................................TATCACAGCCATTTTGGCGAGT..................22546.004.6015.0026.40
............................................................TATTACAGCCATTTTGACGAGTT.................23545.002.4038.803.80
............................................................TATCACAGCCATTTTGACGGGT..................22544.404.6019.8020.00
............................................................TATCACAGCCATCTTGACGAGT..................22543.204.0017.2022.00
..............................................................TATCAGCCATTTTGACGAGT..................20371.334.3347.3319.67
............................................................CATCACAGCCATTTTGACGAGT..................22542.205.2012.2024.80
............................................................TATCACAGCCAxxTTGACGAGT..................20370.334.3349.3316.67
............................................................TATCACAGCTATTTTGACGAGTT.................23541.801.8036.603.40
............................................................TATCACAGCCACTTTGACGAGT..................22541.006.4018.0016.60
............................................................TATCACAGCCATTTTGACTAGTT.................23538.8029.203.006.60
............................................................TATCACAGCCATTTTGCCGAGT..................22538.204.2012.6021.40
............................................................TATCACAGCCGTTTTGACGAGT..................22538.003.6014.4020.00
............................................................TATCAAAGCCATTTTGACGAGT..................22537.000.601.2035.20
............................................................TATCACAGACATTTTGACGAGT..................22537.002.408.2026.40
............................................................TATCACAGTCATTTTGACGAGT..................22536.402.2019.0015.20
............................................................TATCACACCCATTTTGACGAGTT.................23534.007.4018.608.00
............................................................TATAACAGCCATTTTGACGAGT..................22533.801.802.6029.40
.............................................................ATCACAGCCATTTTGACGAGT..................21532.203.804.4024.00
............................................................TATCACAGCCATTTTGATGAGTTT................24532.201.6016.2014.40
.............................................................ATCACAGCCATTTTGACGAGTT.................22531.807.8013.0011.00
............................................................TATCACAGCCATTTTGACGCGT..................22531.604.807.2019.60
......................GCGTCAAAATGACTGTGAGCTAT.......................................................23278.0024.5044.509.00
............................................................TATCACAGCCATTTTGACGATTT.................23530.406.2011.6012.60
..............................................................TCACAGCCATTTTGACGAGT..................20529.400.8018.0010.60
............................................................TATCACAGCCATTTTCACGAGT..................22529.203.8010.0015.40
............................................................TATCACATCCATTTTGACGAGTT.................23528.808.808.8011.20
............................................................TATCACAGCCATTTTTACGAGT..................22528.402.403.8022.20
............................................................TATCACAGCCATTTTGATGAGCT.................23528.400.0024.004.40
............................................................TATCACAGCCATTTTGACGAGTTG................24527.201.6010.8014.80
............................................................TATCACAGCCATTTTGCCGAGTT.................23527.007.8012.806.40
............................................................TATCACAGCCAxTTTGATGAGTT.................22526.000.0023.402.60
............................................................AATCACAGCCATTTTGACGAGT..................22525.200.403.0021.80
............................................................TATCACAGCCATTTTGACGAGCT.................23525.008.8010.805.40
............................................................TATCATAGCCATTTTGACGAGTT.................23525.002.4019.003.60
............................................................TATCACAGCCATTTTGACGATT..................22524.801.006.0017.80
..............................................................TATCAGCCATTTTGACGAGTT.................21340.332.3335.003.00
............................................................TGTCACAGCCATTTTGACGAGT..................22524.001.609.4013.00
............................................................GATCACAGCCATTTTGACGAGT..................22523.801.007.8015.00
............................................................TATCACAGCCATTTTGAAGAGT..................22523.801.603.2019.00
............................................................TATCACAGCCATTTTGACGAGTAA................24339.0010.6720.677.67
............................................................TATCACGGCCATTTTGACGAGTT.................23522.803.8012.406.60
............................................................TATCACAGCCATTTTGACGGGTT.................23522.804.4011.606.80
...........................................................CTATCACAGCCATTTTGACGAGTT.................24522.403.6010.808.00
............................................................TATTACAGCCATTTTGATGAGTT.................23522.400.0021.401.00
............................................................TATCACGGCCATTTTGATGAGTT.................23522.200.6011.809.80
............................................................TATCACAGCCATTTTGACGACT..................22522.002.805.8013.40
............................................................TACCACAGCCATTTTGACGAGTT.................23521.807.408.605.80
............................................................TATCACAGCCATTTCGACGAGTT.................23521.804.8012.604.40
............................................................TATCACAGCCATTTTGACGAAT..................22521.401.402.8017.20
............................................................TATCACAGCCATTTTAACGAGT..................22521.200.807.4013.00
............................................................TATCACAGCCCTTTTGACGAGTT.................23521.207.405.608.20
............................................................TATCACAGCCATTCTGACGAGT..................22520.002.606.4011.00
............................................................TATCACAGCCATTTTGGCGAGTT.................23520.005.208.406.40
............................................................TATCACAGCCATTTTGACGAGTTTG...............25333.008.3315.339.33
............................................................TATCACAGCCATTTTGACGAGTC.................23519.606.806.206.60
............................................................TATCACAACCATTTTGACGAGTT.................23519.403.204.6011.60
............................................................TATCACAGCCACTTTGACGAGTT.................23519.203.809.406.00
............................................................TATCGCAGCCATTTTGACGAGTT.................23519.004.4010.204.40
............................................................CATCACAGCCATTTTGACGAGTT.................23518.204.607.006.60
............................................................TATCACAGCCATTTTGACGAGTTC................24518.004.405.208.40
............................................................TATCACTGCCATTTTGACGAGT..................22517.000.809.606.60
............................................................TATCACAGCCATCTTGACGAGTT.................23517.003.008.805.20
............................................................TATCCCAGCCATTTTGACGAGT..................22516.803.205.008.60
12 super_12:1672851-1672942 - 47.94
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGAC-TTCATATCACAGCCATTTTGA--------CGAGTTTGTTGGACAGCCAGCCT
T---------------ATTAAACGGTAAGAATGATTGGCAGATAA--AAATTTGTTATGCAAATTTCTAAATTTTTGAATAATAATTAACTTTGTTACTTTCACAGCTA
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
C---------------ATTAAACGGCAAGAATG............................................................................1820.500.000.000.50
15 super_16:875655-875756 - 44.27
TCTACCTCTGCTGTCTATTAACGCG-TCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGT-TTGTTGGACAGCCAGCCT
TCTTATCCAGTTCTGCATTTCGGCCCCCAAGACCGATGTGAGTTCAACGCAATGATCCTAATAATTCATTGTCTTTAATAATTCATGCTGAAATTGCAGATG
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...............................................................................AATTxATGCTGAAGTTGCAG...1920.500.000.500.00
4 super_15:1708219-1708353 + 27.96
TCTACCTCTGCTGTCTATTAACGCG-------TCAAAATGACTGTGAGCTATGT-----------------GGATTTGACTTCATATCACAGCCATTTTGAC---GAGTTTGTTGGACAG--------CCAGCCT
CAAGCCCCTGGTCATCATTGCCGAGGATATCGATGGTGAGGCCCTGAGCACCCTGGTGGTGAACCGCCTCAAGATCGGCCTGCAGGTGGCTGCCGTCAAGGCACCCGGTTTCGGCGACAACCGCAAGAGCACCCT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
................................................CACCCTGGTGCTGAAGCGC....................................................................1921.500.001.500.00
................................................................................................................GGCGACAACCGCAAGAGCACC..2121.000.001.000.00
............................................................GAACCGCCTCAAGATCGGCCTGCAGGT................................................2721.000.001.000.00
..............................................................................................GTCAAGGCACCCGGTTTCGGC....................2121.000.001.000.00
...............................................................CCGCCTCAAGATCGGCCTGCAGGTGGCT............................................2820.500.000.500.00
...................................................................CTCAAGATCGGCCTGCAGGT................................................2020.500.000.500.00
......................................................................CAGATCGGCCTGCACGTGG..............................................1920.500.500.000.00
..................TGCCGAGGATATCGATGGTGA................................................................................................2120.500.000.500.00
...............CATTGCCGAGGATATCGATGGT..................................................................................................2220.500.000.500.00
.............ATCATTGCCGAGGATATCGATG....................................................................................................2220.500.000.500.00
..........................................................GTGAACCGCCTCAAGATCGGCCTGCCG..................................................2720.500.000.500.00
....................................................................................................GCACCCGGTTTCGGCGACA................1920.500.000.500.00
....................................................................TCAAGATCGGCCTGCAGGTGGCT............................................2320.500.000.500.00
.....................CGATGATATCGATGGGGA................................................................................................1820.500.000.500.00
...........................TATCGATGGTGAGGCCCTGAG.......................................................................................2120.500.000.500.00
....................................................................TCAAGATCGGCCTGCAGGT................................................1920.500.000.500.00
....................................................................ACAAGATCGGCCTGAAGG.................................................1820.500.000.500.00
.....................................................................CAAGATCGGCCTGCAGGTGGCTGCC.........................................2520.500.000.000.50
...................................................................................AGGTGGCTGCCGTCAAGG..................................1820.500.000.500.00
...............CATTGCCGAGGATATCGAT.....................................................................................................1920.500.000.500.00
................................................................................................CAAGGCACCCGGTTTCGGC....................1920.500.000.500.00
............................................................GAACCGCCTCAAGATCGGCC.......................................................2020.500.000.500.00
.............................................................................................................TTTGGCGACAACCGCAAGAGCA....2220.500.000.500.00
................ATTGCCGAGGATATCGATGGTGAG...............................................................................................2420.500.000.500.00
.............ATCATTGCCGAGGATATCGATGGT..................................................................................................2420.500.000.500.00
............................ATCGATGGTGAGGCCCTGAGCACCCT.................................................................................2620.500.000.500.00
...................................................................................................................GACAACCGCAAGAGCACCCT2020.500.500.000.00
............................ATCGATGGTGAGGCCCTGAG.......................................................................................2020.500.000.500.00
...................................................................CTCAAGATCGGCCTGCAGGTGGCTGCCGT.......................................2920.500.000.500.00
..............TCATTGCCGAGGATATCGATGGT..................................................................................................2320.500.000.500.00
.............................................................................GCCTGCAGGGAGCTGCCG........................................1820.500.000.000.50
............................................................GAACCGCCTCAAGATCGGCCT......................................................2120.500.000.000.50
.............................................................................................CGTCAAGGCACCCGGTTTCGGC....................2220.500.000.500.00
.....................CGATGATATCGATGGAGA................................................................................................1820.500.000.500.00
.............ATCATTGCCGAGGATATCGATGGTGA................................................................................................2620.500.000.500.00
...............TATTGCAGAGGATATCGAT.....................................................................................................1920.500.000.000.50
................ATTGCCGAGGATATCGATGGT..................................................................................................2120.500.000.500.00
................................................................................TGCAGGTGGCTGCCGTCAA....................................1920.500.000.500.00
.............................................................................................CGTCAAGGCACCCGGTTTCGG.....................2120.500.000.500.00
.............................................................................................CGTCAACGCACCCGGTTTCGG.....................2120.500.000.500.00
............................................................GAACCGCCTCAAGATCGGC........................................................1920.500.000.500.00
..................................................................CCTCAAGATCGGCCTGCAGGTGGCTGCC.........................................2820.500.000.500.00
..............................................................................................................TCGGCGACAACCGCAAGAGC.....2020.500.000.500.00
..........................................................GTGAACCGCCTCAAGATCGGCCTGC....................................................2520.500.000.500.00
9 super_0:18670319-18670382 - 22.86
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TGCACCATTGCCTCCCAGCAGATGCCCAAGAAGATTGTGAAC---------------------------------GCCAAGATTGCC---TGCCTAGACT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
....................GATGCCCAAGAAGATTGT..............................................................1820.500.000.500.00
.......................GCCCAAGAAGATTGTGAAC---------------------------------GCCAAG...................2520.500.500.000.00
................AGCAGATGCCCAAGAAGATTGT..............................................................2220.500.500.000.00
.GCACCATTGCCTCCCAGCAGAT.............................................................................2220.500.000.500.00


droYak2 - 6 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
16 chrX:12330556-12330651 - 88.16
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CTTACCCCTGCTGTCTAGTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGCTGG----CCAGTCT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
............................................................TATCACAGCCATTTTGACGAGT..................22711436.714781.712074.43946.003476.00158.57
............................................................TATCACAGCCATTTTGACGAGTT.................2375823.431843.57902.141401.291632.4344.00
............................................................TATCACAGCCATTTTGATGAGTT.................2372158.43946.14314.1447.71844.146.29
............................................................TATCACAGCCATTTTGACGAG...................217552.29280.0055.2927.1492.7197.14
............................................................TATCACAGCCATTTTGATGAGT..................227391.7177.2986.8611.00211.005.57
............................................................TATCACAGCCATTTTGACGAGTTT................247228.8632.0039.1487.8668.861.00
............................................................TATCACAGCCATTTTGACGAGTTA................247153.29122.576.1411.0013.290.29
............................................................TATCACAGCCATTTTGACGCGT..................227148.1429.7122.290.7195.140.29
............................................................TATCACAGCCCTTTTGACGAGT..................227129.7147.7127.862.2951.860.00
................................................................ACAGCCATTTTGACGAGT..................187113.5748.4324.000.8640.140.14
............................................................TATCACAGCCATTTTGACGCGTT.................23783.5716.2911.861.5753.570.29
............................................................TATCACAGCCCTTTTGACGAGTT.................23762.5719.5711.434.4327.140.00
............................................................TATCACAGCCATTTTGCCGAGT..................22758.437.714.430.5745.570.14
............................................................TATCACAGCCATTTTGACGAGTTAA...............25581.0073.800.804.801.600.00
............................................................TATCACAGCCATTTTGACGAGC..................22745.718.143.712.5721.719.57
................................................................ACAGCCATTTTGACGAGTT.................19744.8617.867.432.8616.710.00
............................................................TATCACAGCCATTTTGACGAGG..................22741.299.713.710.5712.2915.00
............................................................TATCACAGCCATTTTTACGAGT..................22736.575.2916.710.1414.140.29
............................................................TATCACAGCCATTTTGACG.....................19733.710.711.860.001.8629.29
............................................................TAGCACAGCCATTTTGACGAGT..................22731.714.148.710.1418.570.14
......................GCGTCAAAATGACTGTGAGCTATG......................................................242109.5024.5015.5035.5034.000.00
............................................................TATCACAGCCATTTTGACGTGT..................22731.146.001.290.2923.570.00
............................................................TATCACAGCCATTTTGACTAGT..................22730.004.1410.141.1414.290.29
............................................................TATCACAGCCGTTTTGACGAGT..................22729.148.864.430.4315.430.00
............................................................TATCACAGCCATTTTGACGA....................20728.717.144.292.8610.434.00
............................................................TATCACAGCCATTTTGACGATT..................22727.861.716.860.0019.290.00
............................................................TATCACAGCCATTTTGATGAG...................21727.432.574.290.5710.0010.00
............................................................TATCACAGCCATTTTGCCGAGTT.................23727.294.431.711.8619.140.14
............................................................TATCACAGCCATTTTGATGAGTTT................24726.575.005.291.4314.860.00
............................................................TATCACAGCCATTTTGACGAGCT.................23725.577.574.572.1411.290.00
............................................................TATCACAGACATTTTGACGAGT..................22724.0015.432.430.575.570.00
................................................................ACAGCCATTTTGATGAGTT.................19722.008.294.570.438.430.29
............................................................TATCACAGCCATTTTGCTGAGTT.................23721.714.292.570.0014.860.00
............................................................TATCACAGCCATTTTGACGTGTT.................23720.863.430.570.1416.710.00
............................................................TATCACAGCCATTTTGATGCGTT.................23719.714.001.710.0014.000.00
............................................................TATCACAGCCAGTTTGACGAGT..................22719.716.572.860.1410.140.00
............................................................TATCACAGCCATTTTGGCGAGT..................22719.149.142.430.576.860.14
............................................................TATCACAGCCATTTTTACGAGTT.................23718.711.717.430.299.290.00
............................................................TATCACAGCCATTTTGTCGAGT..................22718.004.861.860.0011.290.00
............................................................TATCACAGCCATTTTGACGAGA..................22717.864.143.711.577.570.86
............................................................TATCACAGCCATTTTGACGGGT..................22716.575.432.570.867.710.00
............................................................TATCACAGCCATTTTGACGAGTA.................23716.295.574.572.573.290.29
............................................................TATCACAGCCCTTTTGATGAGTT.................23715.716.431.570.007.710.00
............................................................TATCACAGCCCTTTTGACGCGT..................22521.403.602.600.0015.200.00
............................................................TAGCACAGCCATTTTGACGAGTT.................23715.291.573.710.0010.000.00
............................................................TATCACAGCCATTTTGACTAGTT.................23714.861.144.430.438.430.43
............................................................TATCACAGCCATTTTAACGAGT..................22714.863.435.000.436.000.00
............................................................TATCACGGCCATTTTGACGAGT..................22714.716.002.570.295.710.14
............................................................TATCACAGCCATTTTGACGATTT.................23714.710.863.291.439.140.00
............................................................TATCACAGCCACTTTGACGAGT..................22714.576.293.290.434.570.00
...........................................................CTATCACAGCCATTTTGACGAGT..................23714.297.432.710.433.710.00
............................................................CATCACAGCCATTTTGACGAGT..................22714.005.433.001.004.570.00
............................................................TATCACAGCCGTTTTGACGAGTT.................23713.294.141.431.576.140.00
............................................................TATCACAGCCATTTTGACGAGGT.................23713.146.143.430.293.290.00
............................................................TATCACAGCCATTTTGATGAGCT.................23713.006.142.290.004.570.00
............................................................TATCACAGCCATTTTGACGAGTC.................23712.432.571.571.436.000.86
............................................................TATCGCAGCCATTTTGACGAGT..................22712.294.002.710.575.000.00
............................................................TATCACAGCCATCTTGACGAGT..................22711.574.292.710.294.290.00
.............................................................ATCACAGCCATTTTGACGAGTT.................22711.434.711.141.574.000.00
............................................................TATCACAGCCATTTTGAAGAGT..................22711.435.292.140.433.570.00
............................................................TATCACAGCCATTTTGACAAGT..................22711.295.003.290.292.570.14
............................................................TATCACAGACATTTTGACGAGTT.................23711.147.711.140.571.710.00
............................................................TGTCACAGCCATTTTGACGAGT..................22711.004.432.000.434.140.00
............................................................TATCACAGTCATTTTGACGAGT..................22710.715.002.000.003.570.14
............................................................TATCACATCCATTTTGACGAGT..................22710.290.863.141.864.290.14
............................................................TATCACAGCCTTTTTGACGAGT..................22710.143.140.570.006.430.00
............................................................TATCACAGCCATTTCGACGAGT..................22710.143.862.710.572.860.14
............................................................TACCACAGCCATTTTGACGAGT..................22710.143.432.860.573.140.14
............................................................TATCACCGCCATTTTGACGAGT..................22710.002.001.290.575.860.29
............................................................TATCACAGCCATTTTGCCGCGT..................22513.801.201.600.0011.000.00
............................................................TATCACAGCCATTTTGATGATTT.................2379.710.711.000.297.710.00
............................................................TATCACAGCCATTTTGATTAGTT.................2379.710.864.710.004.140.00
............................................................TATCACAGCCATTTTGTCGAGTT.................2379.432.140.570.146.570.00
............................................................TATCACAGCCATTTTCACGAGT..................2279.431.002.430.005.860.14
............................................................TATCACAGCCATTTTGACGGGTT.................2379.291.862.570.574.290.00
............................................................TATCACAGCCATTTTGGCGAGTT.................2379.292.861.431.433.430.14
............................................................TATCACAGCCATTTTGACGAGTTG................2479.143.291.000.712.142.00
............................................................TATAACAGCCATTTTGACGAGT..................2278.713.290.710.434.290.00
............................................................TATCACACCCATTTTGACGAGT..................2278.572.000.861.004.570.14
............................................................TATCACAGCCATTTTGACGCG...................2178.433.711.000.003.430.29
............................................................TATCACAGCCCTTTTGCCGAGT..................22511.002.201.200.007.600.00
............................................................TATCACAGCCCTTTTGACGCGTT.................23510.203.200.600.006.400.00
............................................................TATCACAGCTATTTTGACGAGT..................2277.293.141.570.142.140.29
............................................................TAGCACAGCCATTTTGATGAGTT.................2377.141.001.860.004.290.00
............................................................TATCACAACCATTTTGACGAGT..................2277.002.001.290.143.570.00
...........................................................CTATCACAGCCATTTTGACGAGTT.................2477.002.861.290.292.570.00
............................................................TATCACAGCCATTGTGACGAGT..................2277.001.861.570.143.430.00
............................................................TATCACAGCCATTTTGACAAGTT.................2377.002.712.710.291.140.14
............................................................TACCACAGCCATTTTGACGAGTT.................2376.862.710.571.432.140.00
............................................................TATCACAGCCATTTTAACGAGTT.................2376.862.292.290.292.000.00
............................................................TATCATAGCCATTTTGACGAGT..................2276.712.430.710.862.710.00
............................................................TATTACAGCCATTTTGACGAGT..................2276.572.711.140.432.290.00
............................................................TATCAAAGCCATTTTGACGAGT..................2276.573.141.290.002.140.00
............................................................TAGCACAGCCGTTTTGACGAGT..................2259.200.404.600.004.200.00
............................................................AATCACAGCCATTTTGACGAGT..................2276.431.141.000.144.000.14
............................................................TATCACAGCCATTTTGACGAC...................2176.430.000.140.140.435.71
............................................................TATCACATCCATTTTGACGAGTT.................2376.430.861.290.863.430.00
............................................................TATCACAGCCACTTTGACGAGTT.................2376.292.290.860.572.570.00
............................................................TATCACAGACATTTTGATGAGTT.................2376.295.000.570.000.710.00
............................................................TATCCCAGCCATTTTGACGAGT..................2276.292.291.000.142.860.00
............................................................TATCACAGCCATTTTGATGTGTT.................2376.291.430.140.004.710.00
5 chr3R:15188721-15188816 + 66.3
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
C-CACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACT-TATGTATTCGCAATCATATCACAGCCATTTTGACGAGTTTG--GGTAAAGAAATCT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
............................................................TATCACAGCCATTTTGACGAGT..................22711436.714781.712074.43946.003476.00158.57
............................................................TATCACAGCCATTTTGACGAGTT.................2375823.431843.57902.141401.291632.4344.00
............................................................TATCACAGCCATTTTGATGAGTT.................2372158.43946.14314.1447.71844.146.29
............................................................TATCACAGCCATTTTGACGAG...................217552.29280.0055.2927.1492.7197.14
............................................................TATCACAGCCATTTTGATGAGT..................227391.7177.2986.8611.00211.005.57
............................................................TATCACAGCCATTTTGACGAGTTT................247228.8632.0039.1487.8668.861.00
............................................................TATCACAGCCATTTTGACGAGTTA................247153.29122.576.1411.0013.290.29
............................................................TATCACAGCCATTTTGACGCGT..................227148.1429.7122.290.7195.140.29
............................................................TATCACAGCCCTTTTGACGAGT..................227129.7147.7127.862.2951.860.00
................................................................ACAGCCATTTTGACGAGT..................187113.5748.4324.000.8640.140.14
............................................................TATCACAGCCATTTTGACGCGTT.................23783.5716.2911.861.5753.570.29
............................................................TATCACAGCCCTTTTGACGAGTT.................23762.5719.5711.434.4327.140.00
............................................................TATCACAGCCATTTTGCCGAGT..................22758.437.714.430.5745.570.14
............................................................TATCACAGCCATTTTGACGAGTTAA--.............25581.0073.800.804.801.600.00
............................................................TATCACAGCCATTTTGACGAGC..................22745.718.143.712.5721.719.57
................................................................ACAGCCATTTTGACGAGTT.................19744.8617.867.432.8616.710.00
............................................................TATCACAGCCATTTTGACGAGG..................22741.299.713.710.5712.2915.00
............................................................TATCACAGCCATTTTTACGAGT..................22736.575.2916.710.1414.140.29
............................................................TATCACAGCCATTTTGACG.....................19733.710.711.860.001.8629.29
............................................................TAGCACAGCCATTTTGACGAGT..................22731.714.148.710.1418.570.14
............................................................TATCACAGCCATTTTGACGTGT..................22731.146.001.290.2923.570.00
............................................................TATCACAGCCATTTTGACTAGT..................22730.004.1410.141.1414.290.29
............................................................TATCACAGCCGTTTTGACGAGT..................22729.148.864.430.4315.430.00
............................................................TATCACAGCCATTTTGACGA....................20728.717.144.292.8610.434.00
............................................................TATCACAGCCATTTTGACGATT..................22727.861.716.860.0019.290.00
............................................................TATCACAGCCATTTTGATGAG...................21727.432.574.290.5710.0010.00
............................................................TATCACAGCCATTTTGCCGAGTT.................23727.294.431.711.8619.140.14
............................................................TATCACAGCCATTTTGATGAGTTT................24726.575.005.291.4314.860.00
............................................................TATCACAGCCATTTTGACGAGCT.................23725.577.574.572.1411.290.00
............................................................TATCACAGACATTTTGACGAGT..................22724.0015.432.430.575.570.00
................................................................ACAGCCATTTTGATGAGTT.................19722.008.294.570.438.430.29
............................................................TATCACAGCCATTTTGCTGAGTT.................23721.714.292.570.0014.860.00
............................................................TATCACAGCCATTTTGACGTGTT.................23720.863.430.570.1416.710.00
............................................................TATCACAGCCAGTTTGACGAGT..................22719.716.572.860.1410.140.00
............................................................TATCACAGCCATTTTGATGCGTT.................23719.714.001.710.0014.000.00
............................................................TATCACAGCCATTTTGGCGAGT..................22719.149.142.430.576.860.14
............................................................TATCACAGCCATTTTTACGAGTT.................23718.711.717.430.299.290.00
............................................................TATCACAGCCATTTTGTCGAGT..................22718.004.861.860.0011.290.00
............................................................TATCACAGCCATTTTGACGAGA..................22717.864.143.711.577.570.86
............................................................TATCACAGCCATTTTGACGGGT..................22716.575.432.570.867.710.00
............................................................TATCACAGCCATTTTGACGAGTA.................23716.295.574.572.573.290.29
............................................................TATCACAGCCCTTTTGATGAGTT.................23715.716.431.570.007.710.00
............................................................TAGCACAGCCATTTTGACGAGTT.................23715.291.573.710.0010.000.00
............................................................TATCACAGCCCTTTTGACGCGT..................22521.403.602.600.0015.200.00
............................................................TATCACAGCCATTTTAACGAGT..................22714.863.435.000.436.000.00
............................................................TATCACAGCCATTTTGACTAGTT.................23714.861.144.430.438.430.43
............................................................TATCACGGCCATTTTGACGAGT..................22714.716.002.570.295.710.14
............................................................TATCACAGCCATTTTGACGATTT.................23714.710.863.291.439.140.00
............................................................TATCACAGCCACTTTGACGAGT..................22714.576.293.290.434.570.00
...........................................................CTATCACAGCCATTTTGACGAGT..................23714.297.432.710.433.710.00
............................................................CATCACAGCCATTTTGACGAGT..................22714.005.433.001.004.570.00
............................................................TATCACAGCCGTTTTGACGAGTT.................23713.294.141.431.576.140.00
............................................................TATCACAGCCATTTTGACGAGGT.................23713.146.143.430.293.290.00
............................................................TATCACAGCCATTTTGATGAGCT.................23713.006.142.290.004.570.00
............................................................TATCACAGCCATTTTGACGAGTC.................23712.432.571.571.436.000.86
............................................................TATCGCAGCCATTTTGACGAGT..................22712.294.002.710.575.000.00
............................................................TATCACAGCCATCTTGACGAGT..................22711.574.292.710.294.290.00
............................................................TATCACAGCCATTTTGAAGAGT..................22711.435.292.140.433.570.00
.............................................................ATCACAGCCATTTTGACGAGTT.................22711.434.711.141.574.000.00
............................................................TATCACAGCCATTTTGACAAGT..................22711.295.003.290.292.570.14
............................................................TATCACAGACATTTTGACGAGTT.................23711.147.711.140.571.710.00
............................................................TGTCACAGCCATTTTGACGAGT..................22711.004.432.000.434.140.00
............................................................TATCACAGTCATTTTGACGAGT..................22710.715.002.000.003.570.14
............................................................TATCACATCCATTTTGACGAGT..................22710.290.863.141.864.290.14
............................................................TATCACAGCCATTTCGACGAGT..................22710.143.862.710.572.860.14
............................................................TACCACAGCCATTTTGACGAGT..................22710.143.432.860.573.140.14
............................................................TATCACAGCCTTTTTGACGAGT..................22710.143.140.570.006.430.00
............................................................TATCACCGCCATTTTGACGAGT..................22710.002.001.290.575.860.29
............................................................TATCACAGCCATTTTGCCGCGT..................22513.801.201.600.0011.000.00
............................................................TATCACAGCCATTTTGATGATTT.................2379.710.711.000.297.710.00
............................................................TATCACAGCCATTTTGATTAGTT.................2379.710.864.710.004.140.00
............................................................TATCACAGCCATTTTCACGAGT..................2279.431.002.430.005.860.14
......................TCGTTAAAATGTTTGTGAACT-TATG....................................................25322.0019.670.330.331.330.33
............................................................TATCACAGCCATTTTGTCGAGTT.................2379.432.140.570.146.570.00
............................................................TATCACAGCCATTTTGGCGAGTT.................2379.292.861.431.433.430.14
............................................................TATCACAGCCATTTTGACGGGTT.................2379.291.862.570.574.290.00
............................................................TATCACAGCCATTTTGACGAGTTG................2479.143.291.000.712.142.00
............................................................TATAACAGCCATTTTGACGAGT..................2278.713.290.710.434.290.00
............................................................TATCACACCCATTTTGACGAGT..................2278.572.000.861.004.570.14
............................................................TATCACAGCCATTTTGACGCG...................2178.433.711.000.003.430.29
......................TCGTTAAAATGTTTGTGAACT-........................................................21318.330.000.330.001.0017.00
............................................................TATCACAGCCCTTTTGCCGAGT..................22511.002.201.200.007.600.00
............................................................TATCACAGCCCTTTTGACGCGTT.................23510.203.200.600.006.400.00
............................................................TATCACAGCTATTTTGACGAGT..................2277.293.141.570.142.140.29
............................................................TAGCACAGCCATTTTGATGAGTT.................2377.141.001.860.004.290.00
............................................................TATCACAGCCATTGTGACGAGT..................2277.001.861.570.143.430.00
............................................................TATCACAGCCATTTTGACAAGTT.................2377.002.712.710.291.140.14
...........................................................CTATCACAGCCATTTTGACGAGTT.................2477.002.861.290.292.570.00
............................................................TATCACAACCATTTTGACGAGT..................2277.002.001.290.143.570.00
............................................................TATCACAGCCATTTTAACGAGTT.................2376.862.292.290.292.000.00
............................................................TACCACAGCCATTTTGACGAGTT.................2376.862.710.571.432.140.00
............................................................TATCATAGCCATTTTGACGAGT..................2276.712.430.710.862.710.00
............................................................TATCAAAGCCATTTTGACGAGT..................2276.573.141.290.002.140.00
............................................................TATTACAGCCATTTTGACGAGT..................2276.572.711.140.432.290.00
............................................................TAGCACAGCCGTTTTGACGAGT..................2259.200.404.600.004.200.00
............................................................TATCACATCCATTTTGACGAGTT.................2376.430.861.290.863.430.00
............................................................AATCACAGCCATTTTGACGAGT..................2276.431.141.000.144.000.14
............................................................TATCACAGCCATTTTGACGAC...................2176.430.000.140.140.435.71
............................................................TATCACAGCCATTTTGATGTGTT.................2376.291.430.140.004.710.00
............................................................TATCACAGACATTTTGATGAGTT.................2376.295.000.570.000.710.00
............................................................TATCACAGCCACTTTGACGAGTT.................2376.292.290.860.572.570.00
6 chr2L:9129823-9129929 - 41.94
TCTACCTCTGCTGTCTATTAACG-CGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCA----CAGCCATTTTGACGAGTTT--GTTGGACAGCCAGCCT
TCTTATCCAGTTCTGCATTTCGGCCCCCAAGACCGATGTGAGTACTACGCAATGAACCTTACAATTGTTTCATTGTTTTTAATAATTTAAACTTGAAATTACAGATG
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
12 chr3R:11916678-11916767 - 38.85
TCTACCTCTGCTGTC-------TATTAACGC--GTCAAAATGACTGTGAGCTATGTGGATTTGACTTCA----TATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TTAACATTTGTTATGCAAATTTTAATAACACATGTTAAA---------------------TTAACTTTAATACTTTCACAGCTATGCCAAGGT--GGAGAAGATTCCCGGTGG
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
................................................................................GCTATGCCAAGGT--GGAGA.............1820.500.500.000.000.000.00
..................................................................................TATGCCAAGGT--GGAGAAGA..........1920.500.000.000.500.000.00
.....................................AA---------------------TTAACTTTAAGACTTTCACT.................................2220.500.000.000.000.500.00
...................................................................................ATGGCGAGGT--GGAGAAGA..........1820.500.000.000.000.500.00
15 chrX:11122164-11122239 - 32.25
TCT-ACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATA-TCACAGCCATT-TTGACGAG---TTTGTTGGACAGCCAGCCT
TTCCCGCTCTGGAGCTGGCCAACGCC-CAG---------------------------CGCAAGCCCCTGGTCATCATTGCCGAGGATATCGATGGTGAGGC--CCT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................................................CATTGCCGAGGATATCGATGGTGA........2420.500.000.000.500.000.00
...........................CAG---------------------------CGCAAGCCCCTGGTCAT................................2020.500.000.000.500.000.00
.......................................................................CATCATTGCCGAGGATATC................1920.500.500.000.000.000.00
.......................................................................CATCATTGCCGAGGATATCGAT.............2220.500.000.000.500.000.00
...........................................................................ATTGCCGAGGATATCGATGGTGAG.......2420.500.000.000.500.000.00
13 chr3R:19161445-19161516 - 27.92
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TGCACCATTGCCTCCCAGCAGATGCCCAAGAAGATTGTGAAC----------------------------GCCAAGATTGCCTGCCTAGACTTCTCGCTT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
.....CATTGCCTCCCAGCAGATGCCC.........................................................................2220.500.500.000.000.000.00
....................GATGCCCAAGAAGATTGTGAAC----------------------------GC............................2420.500.000.000.500.000.00
...................AGATGCCCAAGAAGATTGTGAAC----------------------------GC............................2520.500.000.000.500.000.00
............................AGAAGATTGTGAAC----------------------------GCCAAGAT......................2220.500.000.000.500.000.00
.....................ATGCCCAAGAAGATTGTGAAC----------------------------TCCAAG........................2720.500.000.000.500.000.00
....................GATGCCCCAGAAGATTGTGA............................................................2020.500.000.000.500.000.00
...................AGATGCCCAAGAAGATTGT..............................................................1920.500.500.000.000.000.00
....................GATGCCCAAGAAGATTGTGAAC----------------------------..............................2220.500.000.000.000.000.50
................AGCAGATGCCCAAGAAGATTGTGA............................................................2420.500.000.000.000.500.00
................................GAATGTGAAG----------------------------GCCAAGATT.....................1920.500.000.000.000.500.00


droEre2 - 7 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
11 scaffold_4690:6132295-6132393 - 85.53
TCTA---CCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TTTAAACCCCCTGCTGTCTATTAGCGCGTCAAAGTGACTGTGAACTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGGCAG----CCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
...............................................................TATCACAGCCATTTTGACGAGT..................22933580.442098.56861.560.0030620.33
...............................................................TATCACAGCCATTTTGACGAGTT.................2395402.11588.89305.890.004507.33
...............................................................TATCACAGCCATTTTGATGAGTT.................2392850.78448.44470.330.001932.00
...............................................................TATCACAGCCATTTTGACGAG...................2192235.44125.0033.560.002076.89
...............................................................TATCACAGCCATTTTGATGAGT..................2291222.6761.67150.000.001011.00
...............................................................TATCACATCCATTTTGACGAGT..................229383.4411.111.000.00371.33
...............................................................TATCACAGCCATTTTGACTAGT..................229374.7825.225.560.00344.00
...............................................................TATCACAGCAATTTTGACGAGT..................229320.780.780.560.00319.44
...............................................................TATCACAGCCATTTTGACGAGTTT................249303.007.8911.670.00283.44
...............................................................TATCACAGCCATTTTTACGAGT..................229286.7835.004.110.00247.67
...............................................................TATCACAGCCATTTTGACGA....................209161.226.781.890.00152.56
...............................................................TATAACAGCCATTTTGACGAGT..................229143.891.331.000.00141.56
...............................................................TATCACAGACATTTTGACGAGT..................229129.783.221.000.00125.56
...............................................................TATCACAGCCATTTTGATGAG...................219106.782.118.000.0096.67
...............................................................TATCACAGCCATTTTGAAGAGT..................22988.111.890.110.0086.11
...................................................................ACAGCCATTTTGACGAGT..................181169.0917.277.820.0044.00
...............................................................TATCACAGCCATTTTGACGAGC..................22972.786.672.780.0063.33
...............................................................TATCACAGCCATTTTGACGAGTTA................24962.4429.332.440.0030.67
...............................................................TACCACAGCCATTTTGACGAGT..................22961.442.891.110.0057.44
...............................................................TATCACAGCCATTTTGACGATT..................22959.2211.224.330.0043.67
...............................................................TATCACAGCCATTTTGACGAGTA.................23958.891.221.440.0056.22
...............................................................TATCACAGCCATTTTGACGAGA..................22958.562.891.670.0054.00
...............................................................TATCACAGCCCTTTTGACGAGT..................22958.1117.894.670.0035.56
...............................................................TATCACAGCCATTTTGACGAGTC.................23957.782.000.780.0055.00
...............................................................TATCACAGCCATTTTGACTAGTT.................23957.447.561.560.0048.33
...............................................................TATCACATCCATTTTGACGAGTT.................23956.673.110.330.0053.22
...............................................................TATCACAGCCATTTTGACGCGT..................22954.8919.4412.670.0022.78
...............................................................TATCACAGCCATTTTTACGAGTT.................23949.8911.561.890.0036.44
...............................................................TATCACAGCCATTTTGACAAGT..................22947.894.781.110.0042.00
...............................................................TATCAAAGCCATTTTGACGAGT..................22947.220.890.780.0045.56
...............................................................TATCACAGCAATTTTGACGAGTT.................23945.780.110.110.0045.56
...............................................................TATCACAGCCAxTTTGACGAGT..................21940.560.330.440.0039.78
...............................................................TATCACAGCCATTTTGCCGAGT..................22938.445.005.670.0027.78
...............................................................TATCACAGCCATTTTGACGAGG..................22938.0010.110.440.0027.44
...............................................................TATCACACCCATTTTGACGAGT..................22937.333.670.440.0033.22
...............................................................TAACACAGCCATTTTGACGAGT..................22936.891.220.110.0035.56
..............................................................CTATCACAGCCATTTTGACGAGT..................23935.222.781.440.0031.00
...............................................................TATCGCAGCCATTTTGACGAGT..................22933.782.560.670.0030.56
...............................................................TATCACAGCCATTTTGGCGAGT..................22933.442.890.890.0029.67
...............................................................TATCACAGCCACTTTGACGAGT..................22933.335.780.560.0027.00
...............................................................TATCACAGCCATTTCGACGAGT..................22933.002.111.220.0029.67
...............................................................TATCACAGCCATTTTGATTAGTT.................23933.0010.004.000.0019.00
...............................................................TATCACAGCCATTTTGACGGGT..................22930.892.891.440.0026.56
...............................................................TATCACAGCCATCTTGACGAGT..................22930.782.000.670.0028.11
...............................................................CATCACAGCCATTTTGACGAGT..................22930.672.890.780.0027.00
...............................................................TATCACGGCCATTTTGACGAGT..................22929.111.891.000.0026.22
...............................................................TATCACATCCATTTTGATGAGTT.................23929.002.890.330.0025.78
...............................................................TATCACATCCATTTTGACGAG...................21927.891.000.110.0026.78
...............................................................TATCACAGCCATTTTGACTAG...................21927.782.440.670.0024.67
................................................................ATCACAGCCATTTTGACGAGT..................21927.670.890.670.0026.11
...............................................................TATCACAGCCATTTTGACGAGTG.................23927.560.670.330.0026.56
...............................................................TATCACAGCCATTTTGACG.....................19927.220.220.440.0026.56
...............................................................TATCACAGCCATTTTCACGAGT..................22926.226.780.890.0018.56
...............................................................TATCACAGCCATTTTGACCAGT..................22925.785.000.220.0020.56
...............................................................TATTACAGCCATTTTGACGAGT..................22925.442.110.670.0022.67
...............................................................TATCACAACCATTTTGACGAGT..................22924.673.440.330.0020.89
...............................................................TATCACAGCCGTTTTGACGAGT..................22924.562.891.780.0019.89
...............................................................TAGCACAGCCATTTTGACGAGT..................22924.442.221.670.0020.56
...............................................................TATCACAGCCATTCTGACGAGT..................22924.113.560.330.0020.22
...............................................................TATGACAGCCATTTTGACGAGT..................22923.670.560.330.0022.78
...............................................................TATAACAGCCATTTTGACGAGTT.................23922.780.440.220.0022.11
...............................................................TATCACAGCAATTTTGACGAG...................21922.440.220.000.0022.22
...............................................................TATCACAGCCATTTTGATGAGTC.................23922.330.220.890.0021.22
...............................................................TATCATAGCCATTTTGACGAGT..................22921.890.780.560.0020.56
...............................................................TATCACAGACATTTTGACGAGTT.................23921.671.560.000.0020.11
...............................................................TATCACAGCTATTTTGACGAGT..................22921.441.221.000.0019.22
...............................................................TATCACAGCCATTTTTACGAG...................21920.333.220.220.0016.89
...............................................................TATCACAGCCATTTTAACGAGT..................22920.333.671.110.0015.56
...............................................................TATCACAGCCATTTTGACGATTT.................23920.003.221.780.0015.00
...............................................................TATCACAGCCATTTTGATGAGTTT................24919.781.005.220.0013.56
...............................................................TATCACAGTCATTTTGACGAGT..................22919.111.780.440.0016.89
...............................................................TATCACAGCCAxxTTGACGAGT..................20723.860.000.140.0023.71
.................................................................TCACAGCCATTTTGACGAGT..................20918.001.890.110.0016.00
...............................................................TATCACAGCCATTTTGATGAGTA.................23918.000.000.220.0017.78
...............................................................TATCACAGCAATTTTGATGAGTT.................23917.890.330.330.0017.22
...............................................................TATCACAGCCATTTTGACGACT..................22917.445.220.440.0011.78
...............................................................TATCACATCCATTTTGATGAGT..................22917.110.220.110.0016.78
...............................................................TGTCACAGCCATTTTGACGAGT..................22916.781.890.560.0014.33
...................................................................ACAGCCATTTTGACGAGTT.................191113.553.733.270.006.55
...............................................................TATCACAGCCATTTTGACGAGTTG................24916.111.330.780.0014.00
...............................................................TATCACAGCCATTTTGACGAAT..................22915.892.560.670.0012.67
...............................................................TATCACAGCCATTTTTATGAGTT.................23915.897.221.220.007.44
...................................................................ACAGCCATTTTGATGAGTT.................191112.914.004.270.004.64
...............................................................TATCACGGCCATTTTGATGAGTT.................23915.780.782.000.0013.00
...............................................................TATCACCGCCATTTTGACGAGT..................22915.671.560.780.0013.33
...............................................................TATCACAGCCATTTTGATTAGT..................22915.562.111.220.0012.22
...............................................................TCTCACAGCCATTTTGACGAGT..................22914.892.330.220.0012.33
...............................................................TATCACAGCCATTTTGATGATTT.................23914.334.673.780.005.89
...............................................................TATCCCAGCCATTTTGACGAGT..................22913.780.560.220.0013.00
...............................................................TATCACAGCCATTTTGAAGAGTT.................23913.560.440.330.0012.78
...............................................................TATCACAGCCATTTTGACGCGTT.................23913.565.115.220.003.22
.................................................................TATCAGCCATTTTGACGAGT..................20716.860.000.000.0016.86
...............................................................GATCACAGCCATTTTGACGAGT..................22913.003.330.220.009.44
...............................................................TATCACAGCCATTTTGACGTGT..................22912.563.562.560.006.44
...............................................................TATCACAGCCATTTTGACGAGTTAA...............25716.1411.570.430.004.14
...............................................................TATCACAGCCATTTTGACGAGCT.................23912.115.000.890.006.22
...............................................................TATCACAGCAATTTTGATGAGT..................22911.220.110.000.0011.11
...............................................................TATCACAGCCATTTTGTCGAGT..................22911.112.890.890.007.33
...............................................................TATCACATCCATTTTGACTAGT..................22713.861.290.000.0012.57
...............................................................TATCACAGCCATTTTGACGAT...................21910.781.670.330.008.78
...............................................................TATCACAGACATTTTGATGAGTT.................23910.330.780.330.009.22
13 scaffold_4770:10769261-10769351 - 61.29
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCTTTCT------TATACCATGTCGTTAAAATGTTTGTGAACT-TATGTATTCGCAATCATATCACAGCCATTTTGACGAGTTTG--GGTAAAGAAATCT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
............................................................TATCACAGCCATTTTGACGAGT..................22933580.442098.56861.560.0030620.33
............................................................TATCACAGCCATTTTGACGAGTT.................2395402.11588.89305.890.004507.33
............................................................TATCACAGCCATTTTGATGAGTT.................2392850.78448.44470.330.001932.00
............................................................TATCACAGCCATTTTGACGAG...................2192235.44125.0033.560.002076.89
............................................................TATCACAGCCATTTTGATGAGT..................2291222.6761.67150.000.001011.00
............................................................TATCACATCCATTTTGACGAGT..................229383.4411.111.000.00371.33
............................................................TATCACAGCCATTTTGACTAGT..................229374.7825.225.560.00344.00
............................................................TATCACAGCAATTTTGACGAGT..................229320.780.780.560.00319.44
............................................................TATCACAGCCATTTTGACGAGTTT................249303.007.8911.670.00283.44
............................................................TATCACAGCCATTTTTACGAGT..................229286.7835.004.110.00247.67
............................................................TATCACAGCCATTTTGACGA....................209161.226.781.890.00152.56
............................................................TATAACAGCCATTTTGACGAGT..................229143.891.331.000.00141.56
............................................................TATCACAGACATTTTGACGAGT..................229129.783.221.000.00125.56
............................................................TATCACAGCCATTTTGATGAG...................219106.782.118.000.0096.67
............................................................TATCACAGCCATTTTGAAGAGT..................22988.111.890.110.0086.11
................................................................ACAGCCATTTTGACGAGT..................181169.0917.277.820.0044.00
............................................................TATCACAGCCATTTTGACGAGC..................22972.786.672.780.0063.33
............................................................TATCACAGCCATTTTGACGAGTTA................24962.4429.332.440.0030.67
............................................................TACCACAGCCATTTTGACGAGT..................22961.442.891.110.0057.44
............................................................TATCACAGCCATTTTGACGATT..................22959.2211.224.330.0043.67
............................................................TATCACAGCCATTTTGACGAGTA.................23958.891.221.440.0056.22
............................................................TATCACAGCCATTTTGACGAGA..................22958.562.891.670.0054.00
............................................................TATCACAGCCCTTTTGACGAGT..................22958.1117.894.670.0035.56
............................................................TATCACAGCCATTTTGACGAGTC.................23957.782.000.780.0055.00
............................................................TATCACAGCCATTTTGACTAGTT.................23957.447.561.560.0048.33
............................................................TATCACATCCATTTTGACGAGTT.................23956.673.110.330.0053.22
............................................................TATCACAGCCATTTTGACGCGT..................22954.8919.4412.670.0022.78
............................................................TATCACAGCCATTTTTACGAGTT.................23949.8911.561.890.0036.44
............................................................TATCACAGCCATTTTGACAAGT..................22947.894.781.110.0042.00
............................................................TATCAAAGCCATTTTGACGAGT..................22947.220.890.780.0045.56
............................................................TATCACAGCAATTTTGACGAGTT.................23945.780.110.110.0045.56
............................................................TATCACAGCCAxTTTGACGAGT..................21940.560.330.440.0039.78
............................................................TATCACAGCCATTTTGCCGAGT..................22938.445.005.670.0027.78
............................................................TATCACAGCCATTTTGACGAGG..................22938.0010.110.440.0027.44
............................................................TATCACACCCATTTTGACGAGT..................22937.333.670.440.0033.22
............................................................TAACACAGCCATTTTGACGAGT..................22936.891.220.110.0035.56
...........................................................CTATCACAGCCATTTTGACGAGT..................23935.222.781.440.0031.00
............................................................TATCGCAGCCATTTTGACGAGT..................22933.782.560.670.0030.56
............................................................TATCACAGCCATTTTGGCGAGT..................22933.442.890.890.0029.67
............................................................TATCACAGCCACTTTGACGAGT..................22933.335.780.560.0027.00
............................................................TATCACAGCCATTTTGATTAGTT.................23933.0010.004.000.0019.00
............................................................TATCACAGCCATTTCGACGAGT..................22933.002.111.220.0029.67
............................................................TATCACAGCCATTTTGACGGGT..................22930.892.891.440.0026.56
............................................................TATCACAGCCATCTTGACGAGT..................22930.782.000.670.0028.11
............................................................CATCACAGCCATTTTGACGAGT..................22930.672.890.780.0027.00
............................................................TATCACGGCCATTTTGACGAGT..................22929.111.891.000.0026.22
............................................................TATCACATCCATTTTGATGAGTT.................23929.002.890.330.0025.78
............................................................TATCACATCCATTTTGACGAG...................21927.891.000.110.0026.78
............................................................TATCACAGCCATTTTGACTAG...................21927.782.440.670.0024.67
.............................................................ATCACAGCCATTTTGACGAGT..................21927.670.890.670.0026.11
............................................................TATCACAGCCATTTTGACGAGTG.................23927.560.670.330.0026.56
............................................................TATCACAGCCATTTTGACG.....................19927.220.220.440.0026.56
............................................................TATCACAGCCATTTTCACGAGT..................22926.226.780.890.0018.56
............................................................TATCACAGCCATTTTGACCAGT..................22925.785.000.220.0020.56
............................................................TATTACAGCCATTTTGACGAGT..................22925.442.110.670.0022.67
............................................................TATCACAACCATTTTGACGAGT..................22924.673.440.330.0020.89
............................................................TATCACAGCCGTTTTGACGAGT..................22924.562.891.780.0019.89
............................................................TAGCACAGCCATTTTGACGAGT..................22924.442.221.670.0020.56
............................................................TATCACAGCCATTCTGACGAGT..................22924.113.560.330.0020.22
............................................................TATGACAGCCATTTTGACGAGT..................22923.670.560.330.0022.78
............................................................TATAACAGCCATTTTGACGAGTT.................23922.780.440.220.0022.11
............................................................TATCACAGCAATTTTGACGAG...................21922.440.220.000.0022.22
............................................................TATCACAGCCATTTTGATGAGTC.................23922.330.220.890.0021.22
............................................................TATCATAGCCATTTTGACGAGT..................22921.890.780.560.0020.56
............................................................TATCACAGACATTTTGACGAGTT.................23921.671.560.000.0020.11
............................................................TATCACAGCTATTTTGACGAGT..................22921.441.221.000.0019.22
............................................................TATCACAGCCATTTTTACGAG...................21920.333.220.220.0016.89
............................................................TATCACAGCCATTTTAACGAGT..................22920.333.671.110.0015.56
............................................................TATCACAGCCATTTTGACGATTT.................23920.003.221.780.0015.00
............................................................TATCACAGCCATTTTGATGAGTTT................24919.781.005.220.0013.56
............................................................TATCACAGTCATTTTGACGAGT..................22919.111.780.440.0016.89
............................................................TATCACAGCCAxxTTGACGAGT..................20723.860.000.140.0023.71
..............................................................TCACAGCCATTTTGACGAGT..................20918.001.890.110.0016.00
............................................................TATCACAGCCATTTTGATGAGTA.................23918.000.000.220.0017.78
............................................................TATCACAGCAATTTTGATGAGTT.................23917.890.330.330.0017.22
............................................................TATCACAGCCATTTTGACGACT..................22917.445.220.440.0011.78
............................................................TATCACATCCATTTTGATGAGT..................22917.110.220.110.0016.78
............................................................TGTCACAGCCATTTTGACGAGT..................22916.781.890.560.0014.33
................................................................ACAGCCATTTTGACGAGTT.................191113.553.733.270.006.55
............................................................TATCACAGCCATTTTGACGAGTTG................24916.111.330.780.0014.00
............................................................TATCACAGCCATTTTGACGAAT..................22915.892.560.670.0012.67
............................................................TATCACAGCCATTTTTATGAGTT.................23915.897.221.220.007.44
............................................................TATCACGGCCATTTTGATGAGTT.................23915.780.782.000.0013.00
................................................................ACAGCCATTTTGATGAGTT.................191112.914.004.270.004.64
............................................................TATCACCGCCATTTTGACGAGT..................22915.671.560.780.0013.33
............................................................TATCACAGCCATTTTGATTAGT..................22915.562.111.220.0012.22
......................TCGTTAAAATGTTTGTGAACT-TATG....................................................25527.402.800.200.0024.40
............................................................TCTCACAGCCATTTTGACGAGT..................22914.892.330.220.0012.33
............................................................TATCACAGCCATTTTGATGATTT.................23914.334.673.780.005.89
............................................................TATCCCAGCCATTTTGACGAGT..................22913.780.560.220.0013.00
............................................................TATCACAGCCATTTTGACGCGTT.................23913.565.115.220.003.22
............................................................TATCACAGCCATTTTGAAGAGTT.................23913.560.440.330.0012.78
..............................................................TATCAGCCATTTTGACGAGT..................20716.860.000.000.0016.86
............................................................GATCACAGCCATTTTGACGAGT..................22913.003.330.220.009.44
............................................................TATCACAGCCATTTTGACGAGTTAA--.............25716.1411.570.430.004.14
............................................................TATCACAGCCATTTTGACGTGT..................22912.563.562.560.006.44
............................................................TATCACAGCCATTTTGACGAGCT.................23912.115.000.890.006.22
............................................................TATCACAGCAATTTTGATGAGT..................22911.220.110.000.0011.11
............................................................TATCACAGCCATTTTGTCGAGT..................22911.112.890.890.007.33
............................................................TATCACATCCATTTTGACTAGT..................22713.861.290.000.0012.57
............................................................TATCACAGCCATTTTGACGAT...................21910.781.670.330.008.78
2 scaffold_4929:5758359-5758479 + 34.62
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTG---------GATTTGAC---TTCATATCACAGCCA--------TTTTGAC----GAGTTTGTT--GGACAGCCAGCCT
TGCTCCTCTTCTGCGAGA-AGAAAATCAAGTCGGCACCCAGCATCGTGCCTGCCCTGGAGTTGGCCAATGCGCAGCGCAAGCCCTTGGTGATTATCGCCGAGGAC----TTGGAGGCGGAGGCACT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
........................................................................................................C----TTGGAGGCGGAGCCGCT1820.500.500.000.000.00
........................................................................................................C----TTGGAGGCGGATGCAAT1820.500.000.000.000.50
5 scaffold_4929:12731298-12731377 + 32.65
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCGGTCTT----ATCCAGTTCTGCATTTCGGCCCCCAAGACCGATGTGAGTATTACGCGATGATCCATACAATT-----GTTTC-----------ATTGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
1 scaffold_4820:9761482-9761559 + 31.21
TCTACCTCTGCTGTCT--ATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CCTGCCTAGACTTTTCGCTTCAGAAGACCAAGATGAAGATGGGCGTCCAGGTCTTGA---------TCAACGATCCCGACAAGCTTG---------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.................................TGAAGATGGGCGTCCAGGTCTTGA---------TCA.................................2720.500.000.000.000.50
.........................GACCAAGATGAAGATGGGCGTCCAG....................................................2520.500.000.000.000.50
.......AGACTTTTCGCTTCAGAA.............................................................................1820.500.500.000.000.00
............................................GTCCAGGTCTTGA---------TCAACG..............................1920.500.500.000.000.00
.....................................GATGGGCGTCCAGGTCTTGA---------....................................2020.500.500.000.000.00
....................CACAAGAACAAGATGAAG................................................................1820.500.000.500.000.00
...........................CCAAGATCAAGATGGGTGT........................................................1920.500.000.000.000.50
...............................GATGAGGATGGGCGTCCAGGTCT................................................2320.500.000.000.000.50
............................CAAGATCAAGATGGGTGT........................................................1820.500.000.000.000.50
....................CACAAGACCAAGATGAAGATCG............................................................2220.500.500.000.000.00
.....................................GATGGGCGTCCAGGTCTTGA---------TCAACG..............................2620.500.000.000.000.50
............................................GTCCAGGTCTTTA---------TCAACG..............................1920.500.500.000.000.00
12 scaffold_4770:9157247-9157318 - 28.14
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGA---GCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGAC-AGCCAGCCT
--------------------ACGCGTTTTAGAGATTAAGATTTGTTATGCAAATTT--CTAAAACTCGCAATT-----------TTTGTTAACCTTAACAGCTA
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
14 scaffold_4770:16958016-16958080 - 23.88
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CCCAAATCCTATG------ACAACTGCAAAATTGCCCTGCTCAACATTGAATTGGA-----------------------------GCTGAAGGCAGAGCG
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.........................................CAACATTGAATGGGG-----------------------------GCTG...........1920.500.000.000.000.50
............................................CATTGAATTGGA-----------------------------GCTGAAGG.......2020.500.500.000.000.00
.............................................ATTGAATTGGA-----------------------------GCTGAAGGC......2020.500.000.000.000.50


droFic1 - 7 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 scf7180000453829:954200-954296 + 86.24
TCTA-CCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCCATCATCTGCTGTCTTTCAAAGCGTCAAGATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGGCGGACA----GCCT
SizeHit CountTotal Norm
10 scf7180000454106:1461976-1462061 - 39.19
TCTACCTCTGCTGTCTA--TTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CCTGCCTGGACTTCTCGCTGCAGAAGACCAAAATGAAGATGGGCG-------TCCAGGTGCTGAT--CAACGACCCCGACAAGCTGG-----AGGCCATC--
SizeHit CountTotal Norm
8 scf7180000453917:10599-10690 - 38.66
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATG--------------TGGATT--TGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCGGCTCCCAAGACCGATGT------------------AAGTTGTTAGATTCCTGATTAACCGATTTATATACTCATACTGTTGCTGATTTAACAGATGGATCA------CAGCGT
SizeHit CountTotal Norm
7 scf7180000453796:108291-108375 - 33.83
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TTTAAATTAATTTTGG-TTGAG--------GTTTTTGT-AATTAAATGTATTAATTTTCTAGCTACGCCAAGGTGGAGAAGATTCCC-----GGCGGTGC
SizeHit CountTotal Norm
6 scf7180000453882:956222-956297 + 30.71
TCTACCTCT-GCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGC---CAT-TTTGACGAGTTTGTTGGACAGCCAGCCT
TTCCCGCCCTCGAGCTGGCCAATGCGCA-------GCGCAAGCCGCT--------------------GGTGATCATCGCCGAGGACATCGACGGCGAGGC--CCT
SizeHit CountTotal Norm
9 scf7180000453932:160365-160499 - 28.5
TCTACCTCTGCTGTCTATTAACGCG----------------------TCAAAATGACTGTGAGCTATGTGGATT--TGACTTCATATCACAGC---CATTTTGACGAGTTTGTTGGACAGCCAG--------CCT
CCGCCCGCTGGTGGTGATCGCCGAGGACGTGGAGGCCGAGGCCCTGAGCACCATGGTCGTGAACCGCCTGAAGGTGGGCCTGCAGGTCTGCGCGGTGAAGGCGCCCGGCTTCGGGGACAACCGGAAGGAGACGCT
SizeHit CountTotal Norm
4 scf7180000453851:1504468-1504471 + 3.06
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCCA------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
None None


droEug1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scf7180000409631:397666-397764 + 90.08
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CTTACCTTTGCTGTCTATTAACGCGTTAAAATGACTGTGAGCTATGTTGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGGCAGGCA-CAT
SizeHit CountTotal Norm
3 scf7180000409122:1082917-1083006 - 38.19
TCTACCTCTGCTGTCTATTA-ACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGC-------CAGCCT
TCTCATCCAGTTCTGCATCTCGGCCCCCAAGACCGATGTGAGTAATATAAAT------------AATATATGTTTTGGA------CTTGGGTAATAATATGAATGGTT
SizeHit CountTotal Norm
1 scf7180000409631:131881-132003 + 37.57
TCTACCTCTGCTGTCTATTAA----------CGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCC-------------AT----TTTGACGAGTTTGTTGGACAGCCAGCCT
TCTGCTCCTGCTGTCCGAGAAGAAGATTTCCTCGGTCCAGAGCATCATTCCCGCTTTGGAGCTGGCC--AACTCACAGCGCAAGCCCCTGGTCATTATTGCTGAGGATATCGATGGCGAGGC--CCT
SizeHit CountTotal Norm
10 scf7180000409557:55643-55761 - 35.99
TCTACCTCTGCTGTCTATTAACGCG--TCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGC--------CATTTTGACGAGTTTGTTGGACAGC---------CAGCCT
ATTATTTCTTTTGGATTTTATATTATTTTAATATATAGAGGATATTTAAGGATTTATTTCTAGACAGTTACTGCTACTATATTTTAATGTGCTAATTAATTTCTATATTCCCATAGCTA
SizeHit CountTotal Norm
11 scf7180000409768:439753-439829 - 29.07
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGC------------TATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TGCACCATTGCCTCCCAGCAGATGCCCAAGAAGATTGTGAACGCTAAGATTGCCTGCCTGGACTTTTCGCTGCAAAA-----------------------------------
SizeHit CountTotal Norm


droBia1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scf7180000301760:4584588-4584685 + 86.11
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
T--ACTTCTGCTGTCTATCAGCGCGTCAAAATGACTGTGAGCTATGTGCATTTAACCTCATATCACAGCCATTTTGACGAGTTTGTTGGGCATGC-GCAT
SizeHit CountTotal Norm
15 scf7180000302422:255846-255928 + 36.53
TCTACCTCTGCTGTCTA--TTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCTTATCCAGTTCTGCATCTCGGCAC-CCAAGACCGATGTGAGTAGT--GAGCTTCACTT---------------ATACCGACTTTCTTATTCATTCAAAC-
SizeHit CountTotal Norm
5 scf7180000302126:3996630-3996708 + 34.66
TCTACCTCTGCTGTCTATTAAC------GCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CCTGCTGCTGCTGTCCGAGAAGAAGATCTCGTCGG---------------TG---------CAGAGCATCATTCCCGCCCTG---GAGCTGGCCAACGCCCAGCGC
SizeHit CountTotal Norm
1 scf7180000299102:407702-407775 + 30.08
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGT-TGGACAGCCAGCCT
TTAAAAACCCATAATACTTTTTATGTT----------------------------GTTAATATTTCAATAGTTATGCCAAGGTGGAAAAGATTCCCGGCGG
SizeHit CountTotal Norm
9 scf7180000302402:5414610-5414681 + 26.45
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TGCACCATTGCCTCCCAGCAGATGCCCAAGAAGATTGTCAAC----------------------------GCCAAGATCGCCTGCCTGGACTTCTCGCTG
SizeHit CountTotal Norm


droTak1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
15 scf7180000415169:933669-933769 - 87.42
TCTAC-CTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TTTATACCCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGCCAGTCGCATT
SizeHit CountTotal Norm
9 scf7180000415871:425819-425939 + 39.49
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTG---------GATTTGAC---TTCATATCACA-GCCATT--------TTGACGAG--TTTGTTGGACAGCCAGCCT
TCCTCCTCTTCTGCGAGAAGAAG-ATCAAGTCGGCCCAGAGCATTGTGCCCGCTTTGGAGCTGGCCAACTCGCAGCGCAAGCCACTGGTGATCATAGCCGAGGATTTGG-AGGCGGAGGCCCT
SizeHit CountTotal Norm
22 scf7180000415871:769853-769937 - 37.41
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCGGTCTCATCCAGTTCTGC----------ATTTCGGCACCCAAGACCGATGTGAGTTTATAGCTAATTCTTGTTTATGAATTCTTGTTAA-----TTCC
SizeHit CountTotal Norm
5 scf7180000415394:889417-889551 + 29.04
TCTACCTCTGCTGTCTATTAACG-------CGTCAAAATGACTGTGAGCTAT-----------------GTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGG-----------ACAGCCAGCCT
CAAGCCGCTGGTCATCATTGCCGAGGATATCGATGGCGAGGCTCTGAGCACCCTGGTGGTGAATCGCCTGAAGATTGGCCTGCAGGTGGCCGCCGTCAAGGCGCCTGGTTTCGGTGATAACCGCAAGAGCACCCT
SizeHit CountTotal Norm
7 scf7180000415711:707590-707661 + 26.45
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TGCACCATTGCCTCGCAGCAGATGCCCAAGAAGATTGTGAAC----------------------------GCCAAGATCGCCTGCCTGGACTTCTCGCTG
SizeHit CountTotal Norm


droEle1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scf7180000491006:2500520-2500618 + 90.08
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCTGCTACTGCTGTCTATTAACGCGTCAAAATGACTGTGAACTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGGTGGGCAGGCA-CAT
SizeHit CountTotal Norm
1 scf7180000486474:1494480-1494603 + 35.41
TCTACCTCTGCTGTCTATTAACGCGT----CAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTT---------------------------------------TGTTGGACAGCCAGCCT
TTTTTGATTTTTGTCTAGTAGTTCTTTACCCAAATTTAATAGGAAATTTGTTGTTTTAACT---------AG---------CGGTTTTGTTTAAAGTTCCTATAAATTTCATGTAAATCTGTTTCTTATTATACA-TCAACAG
SizeHit CountTotal Norm
10 scf7180000490214:294718-294810 - 35.25
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTC--------ATATCACAGCCATTT------TGACGAGTTTGTTGGACAGCCAGCCT-----
CCTGCTCCTGCTGTCCGAGAAGA------------------------AGA--TCTCTTCGGTGCAGAGCATCATTCCCGCCCTGGAGCTGGCCAATGCGCAGCGCAAGCCGCTGGTAAT
SizeHit CountTotal Norm
6 scf7180000491028:2401918-2402003 + 29.84
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
GCCGGATCCAATGCTCCCAAGCGCATCGAGAAGGCCAA-GATCGGGCTGATCCAGTTCTGCATTTCGGCTCCCAAGACCGATGTGAG-------------
SizeHit CountTotal Norm
9 scf7180000491280:4460917-4460988 + 26.45
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TGCACCATCGCCTCCCAGCAGATGCCCAAGAAGATTGTGAAC----------------------------GCCAAGATCGCCTGCCTGGACTTCTCGCTG
SizeHit CountTotal Norm


droRho1 - 7 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scf7180000779841:510723-510818 + 88.16
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TTCAGCTTTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGGCAGGCA----
SizeHit CountTotal Norm
14 scf7180000778413:8489-8591 - 49.84
TCTACCTCTGCTGT-CTATTAACGCGTCAAAAT-GACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGA-GTTTGTTGGACAGCCAGCCT
TATATCACTACTATTTTAATAAGATTTCAAACTAGATTGGTATTTAAATGCAATTCTTTTTATATTTCCATAGCTATGCCAAAGTGGAGAAGATTCCCGGCGG
SizeHit CountTotal Norm
1 scf7180000767661:5781-5868 + 40.58
TCTACCT----CTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CCCAGCGCAAGCCGCTGGTCATCATCGC--CG--AGGACGTCG----AGGCGGAG----GCCCTCAGCA---CCATGGTGGTGAACCGGCTGAA-GGTGGGCCT
SizeHit CountTotal Norm
7 scf7180000761929:979-1066 - 40.58
TCTACCT----CTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CCCAGCGCAAGCCGCTGGTCATCATCGC--CG--AGGACGTCG----AGGCGGAG----GCCCTCAGCA---CCATGGTGGTGAACCGGCTGAA-GGTGGGCCT
SizeHit CountTotal Norm
10 scf7180000776532:311661-311739 - 35.47
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CCTGCTCCTGCTGTCCGAGAA-----------GAAGATCTCCTCTGTG-------CAGAGCATCATTCCCGCATTGG---AGCTGGCCAACGCACAGCGC
SizeHit CountTotal Norm
17 scf7180000780043:607043-607128 - 34.22
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCGGTCTT----ATCCAGTTCTGCATCTCGGCACCCAAGACCGATGTAAGTACCAAT----------AATACCGAATAAACTTTTATTATTACTCGTATT
SizeHit CountTotal Norm
16 scf7180000779233:11746-11822 - 29.86
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGC------------TATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TGCACCATTGCCTCCCAGCAGATGCCCAAGAAGATTGTGAACGCAAAGATTGCCTGCCTGGACTTTTCGCTGCAGAA-----------------------------------
SizeHit CountTotal Norm


droKik1 - 7 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000301542:45346-45455 + 73.04
TCTACCT-----------CTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGT-GGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCT-CCTCCACCTGTGCTTTGCTGTCTATCAACGCGTCAAAATGACTGTGAGCTATGTTGAATTTGACTTCATATCACAGCCATTTTGACGAGTTTGATGGACAGAC-TCAT
SizeHit CountTotal Norm
12 scf7180000302472:1086286-1086379 - 43.85
TCTACCTCTGCTGTCTATTAACGCGTCAAA-ATGACTGTGAGC----TATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCTTATCCAGTTCTGCATCTCGGCGCCAAAGACCGATGTGAGTATTTTAAGCAGATACAAGCTGTGA-----------CCAGGAAACTTATTTAAAAAACGAACC
SizeHit CountTotal Norm
8 scf7180000302277:790227-790328 - 38.43
TCTACCTCTGCTGTCTATTAACGCG----------TCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
GTGACTTCCACTTTTTGCTACAAAACTGCCCAAGAACAGGATAACTATGTGACCGAGGAGCATCGCTTCATAGA-TCTCCGCCTGGACAAGATCATAGAGC-------TG
SizeHit CountTotal Norm
11 scf7180000302389:399569-399682 - 37.38
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGA-CTGTGAGCTATGTGGATTTGACTTCATATCACAG-----------CCA-TTTTGACGAGTTTGTTGGA-CAGCCAGCCT
CTTCTCCCAGAAGAAGATCAAGTCGGCGACGAGCATCGTGCCGGCCTTGGAACTGGCCAACGCCCAGCGGAAGCCGCTGGTCATCATTGCCGAGGATGTAGAGGGCGAAGCCCT
SizeHit CountTotal Norm
4 scf7180000302724:184517-184609 + 36.7
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACA-------------GCCAG-CCT
C-TGCTTTTGCTTTCGGAGAAG-----AAGATCAC------C----------TCGGTGCAGAGCATCGTTCCCGCCCTGGAGCTGGCCAATGCTCAGCGCAAGCCGCTGGTCAT
SizeHit CountTotal Norm
2 scf7180000302640:63793-63870 + 29.1
TCT--------------ACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGC--CAGCC-----T
TCCCTGAAGAAGATCACATCGCTGTCGCAGAT-----CGTCAAAA---------------------------------------GTCTGGAGCAGTCCGTCGGGCAGCGTCGGCCACTGGT
SizeHit CountTotal Norm
13 scf7180000302475:70839-70906 - 23.67
TCT--ACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCCCGAC------------------------------TCCGAATAA--TTGATTCCTCTTC-TCGCATAGCTACGCCAAGG--TGGAGAAGATTCCCGGCGG
SizeHit CountTotal Norm


droAna3 - 6 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scaffold_13047:797460-797571 + 60.94
TCTACCTCTGCT------------GTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TGTCCCGCTTCTGCTTCATTACCTGTTTCCCAGCGCGTCGAAATGACTGTGACTTATGCGTATTTGATGTCATATCACAGCCATTTTGACGAGTTTGGTGGACAGTGAAAGT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
........................................................................TATCACAGCCATTTTGACGAGT..................22659771.001671.6753117.503713.831268.00
........................................................................TATCACAGCCATTTTGACGAGTT.................2368738.671852.834733.171560.33592.33
........................................................................TATCACAGCCATTTTGACGAG...................2163866.5043.673629.5084.00109.33
........................................................................TATCACAGCCATTTTGATGAGTT.................2362509.3362.501631.33735.8379.67
........................................................................TATCACAGCCATTTTGACGAGTTT................2461507.00425.00871.67191.6718.67
........................................................................TATCACAGCCATTTTGATGAGT..................2261144.5017.33903.17208.5015.50
........................................................................TATCACATCCATTTTGACGAGT..................2261035.1716.671003.836.508.17
........................................................................TATCACAGACATTTTGACGAGT..................226516.1710.67486.1716.832.50
........................................................................TAGCACAGCCATTTTGACGAGT..................226443.000.00414.1726.502.33
........................................................................TATCACAGCCATTTTGACTAGT..................226425.676.67392.1711.0015.83
........................................................................TATCACAGCCATTTTGACGA....................206425.004.17399.8313.008.00
........................................................................TATCACAGCCATTTTTACGAGT..................226249.334.50205.0015.8324.00
........................................................................TATCACAGCCATTTTGACGAAT..................226223.6713.83208.501.000.33
........................................................................TATCACAGCCATTTTGACGAGTTA................246188.6715.6733.3315.33124.33
........................................................................TATCACAGCCATTTTGACGACT..................226181.008.00162.007.173.83
........................................................................TATCACAGCCATTTTGACGATT..................226163.676.83139.178.179.50
........................................................................TATCACAGCAATTTTGACGAGT..................226157.332.17144.5010.170.50
........................................................................TATCACAGCCATTTTGACGAGC..................226133.832.8386.3338.336.33
........................................................................TATCACAGCCATTTTGACGAGA..................226117.500.83102.009.675.00
........................................................................TATCACAGCCATTTTGATGAG...................216113.001.5098.8312.330.33
........................................................................TATCACATCCATTTTGACGAGTT.................236111.1718.5088.002.672.00
........................................................................TATAACAGCCATTTTGACGAGT..................22694.833.8381.678.830.50
........................................................................TATCACAGCCATTTTGACGAGTTAA...............253170.333.672.672.67161.33
........................................................................TATCACAGCCATCTTGACGAGT..................22682.005.1768.176.831.83
........................................................................TATCACAGCCATTTTGACG.....................19677.670.1773.502.831.17
........................................................................TATCGCAGCCATTTTGACGAGT..................22675.171.3366.506.331.00
........................................................................TATCACGGCCATTTTGACGAGT..................22674.172.6765.005.171.33
........................................................................TATCACAGCCATTTTGACAAGT..................22671.671.3362.835.671.83
........................................................................TATCACAGCCAxTTTGACGAGT..................21669.331.1766.501.170.50
........................................................................TATCACAGCCATTTTGACGAGTTG................24669.001.3356.006.335.33
........................................................................TATCACATCCATTTTGACGAG...................21667.170.3366.500.000.33
........................................................................TATCACAGCCACTTTGACGAGT..................22666.336.6750.676.332.67
............................................................................ACAGCCATTTTGACGAGT..................18665.830.0013.8340.1711.83
........................................................................TATCACAGCCATTTTGATGAGTTT................24665.505.0032.5026.831.17
........................................................................TATCACAGCCATTTTGGCGAGT..................22665.330.8354.676.503.33
........................................................................TATCACAGCCGTTTTGACGAGT..................22662.834.0041.3315.671.83
........................................................................TATCACAGCCCTTTTGACGAGT..................22662.332.6728.5018.0013.17
........................................................................TATCACAGCCATTTCGACGAGT..................22660.830.6751.007.831.33
........................................................................TATCACAGACATTTTGACGAGTT.................23660.1712.6738.008.001.50
........................................................................TATCACAGCCATTTTGACGCGT..................22659.670.8310.3333.1715.33
........................................................................CATCACAGCCATTTTGACGAGT..................22659.501.3349.505.333.33
........................................................................TATCACAGCCATTTTGACGAT...................21658.830.6757.170.330.67
........................................................................TACCACAGCCATTTTGACGAGT..................22656.831.3350.333.331.83
........................................................................TATCACAGCCATTTTGACGGGT..................22656.001.3347.334.333.00
........................................................................TATCACACCCATTTTGACGAGT..................22653.502.1741.506.673.17
........................................................................TATCACATCCATTTTGATGAGTT.................23650.170.5046.172.501.00
........................................................................TATCACAGCCATTTTGAAGAGT..................22649.001.5042.833.501.17
........................................................................TAGCACAGCCATTTTGACGAGTT.................23649.000.0037.0011.170.83
........................................................................TATCACAGCTATTTTGACGAGT..................22648.171.0041.335.000.83
........................................................................TATCACAGCCATTTTTACGAGTT.................23647.505.0022.006.3314.17
........................................................................TATCACAGCCATTTTGACTAGTT.................23644.674.6729.004.007.00
........................................................................TATCACAGCCATTTTGACGAGG..................22643.670.1726.6712.004.83
........................................................................TATTACAGCCATTTTGACGAGT..................22642.501.0037.503.670.33
........................................................................TATCACAGCCATTTTGACGTGT..................22639.670.6711.1724.833.00
........................................................................TATCACAGCCATTTTCACGAGT..................22639.504.5017.6712.175.17
........................................................................TATCACAGTCATTTTGACGAGT..................22639.331.1731.006.171.00
........................................................................TATCACAGCCATTTTAACGAGT..................22639.005.1726.006.171.67
........................................................................TATCACAGCCATTTTGCCGAGT..................22638.830.8310.0024.173.83
........................................................................TATCACATCCATTTTGACTAGT..................22375.000.6772.331.001.00
........................................................................TATCACAGCCATTCTGACGAGT..................22637.173.3328.004.331.50
........................................................................TATCACAGCCATTTTGACTAG...................21636.500.0035.170.670.67
........................................................................TATCATAGCCATTTTGACGAGT..................22635.830.8331.672.171.17
.........................................................................ATCACAGCCATTTTGACGAGT..................21635.331.1731.331.671.17
........................................................................TATCACAGCCATTTTGACGATTT.................23635.007.6721.173.003.17
........................................................................TATCACAGCCATTTTGACGAGTA.................23633.001.6724.004.832.50
........................................................................TATCACAGCCATTTTGACGACTT.................23632.6714.0015.002.171.50
........................................................................TATCACAGCCATTTTGACGAATT.................23631.8312.1718.170.501.00
........................................................................TATCACAGACATTTTGACGAG...................21631.670.1730.171.330.00
........................................................................TATCACAGCCATTTTGACCAGT..................22631.500.6722.174.833.83
........................................................................TAGCACAGCCATTTTGACGAG...................21631.000.0030.001.000.00
........................................................................TATCACAGCCATTTTGACGCGTT.................23629.831.171.8320.006.83
........................................................................TATCAAAGCCATTTTGACGAGT..................22629.830.0021.837.500.50
........................................................................TATCACAGCCAxxTTGACGAGT..................20359.002.3356.330.330.00
........................................................................TATCACAACCATTTTGACGAGT..................22629.330.3323.833.331.83
........................................................................TATCACAGCCAGTTTGACGAGT..................22627.337.831.8316.001.67
........................................................................TATCACATCCATTTTGATGAGT..................22625.330.1725.000.170.00
........................................................................TATCACAGCCATTTTGACGAGCT.................23625.171.836.5011.505.33
............................................................................ACAGCCATTTTGACGAGTT.................19623.830.501.3316.505.50
........................................................................TGTCACAGCCATTTTGACGAGT..................22623.502.0017.003.331.17
........................................................................TATCACATCCATTTTGACGAGTTT................24623.333.1719.830.330.00
.......................................................................CTATCACAGCCATTTTGACGAGT..................23623.000.1717.504.001.33
..........................................................................TCACAGCCATTTTGACGAGT..................20622.001.0019.171.500.33
........................................................................TATCACAGCAATTTTGACGAGTT.................23621.003.5010.836.500.17
........................................................................TATCACAGCCATTTTGACGAGTTTT...............25620.336.837.835.500.17
........................................................................TATCACAGCCATTTTGACGAA...................21620.330.1718.831.170.17
........................................................................TATCACATCCATTTTTACGAGT..................22339.670.6736.330.672.00
........................................................................TATCACAGCCATTTTGTCGAGT..................22619.170.177.3310.171.50
........................................................................TATCACAGCCACTTTGACGAGTT.................23617.836.676.004.171.00
........................................................................TAGCACAGCCATTTTGATGAGTT.................23617.830.0011.835.830.17
..........................................................................TATCAGCCATTTTGACGAGT..................20335.334.0031.330.000.00
........................................................................TCTCACAGCCATTTTGACGAGT..................22617.502.1712.002.171.17
........................................................................TATCACAGCCCTTTTGACGAGTT.................23617.333.501.837.005.00
........................................................................TATCACAGACATTTTGATGAGTT.................23617.330.3313.832.830.33
........................................................................TATCACAGCCATTTTGCCGAGTT.................23617.000.671.6712.672.00
........................................................................TATAACAGCCATTTTGACGAGTT.................23616.834.507.174.171.00
........................................................................AATCACAGCCATTTTGACGAGT..................22616.330.509.006.000.83
........................................................................TATCACAGCCATATTGACGAGT..................22616.337.837.330.830.33
........................................................................TATCCCAGCCATTTTGACGAGT..................22616.000.5011.003.830.67
........................................................................TATCACAGCCAGTTTGACGAGTT.................23615.5010.000.674.500.33
........................................................................TATCACCGCCATTTTGACGAGT..................22615.171.509.172.671.83
........................................................................TATCACAGCCATTTTTACGAG...................21614.830.1711.670.672.33
1 scaffold_12916:12714172-12714272 + 44.02
TCTACCTCTGCTGTCTATTAACGCGT-CAAAATGACTGTGAGCTATG-------TGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCTTATTCAGTTCTGCATCTCGGCTCCCAAAACTGATGTAGGTCTTTTTCAAAATGTTTTTTGTTTCTTTTGTTAAAAA--TTGAATCGTTTGTCAGATGG-----AT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..................................................AAAATGTTTATTGTTTTT........................................1830.330.000.000.330.00
..................................................................................TGAATCGTTTGTTAGTTGG-----..1920.500.500.000.000.00
5 scaffold_13340:11037390-11037478 + 43.16
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTT----GACGAGTTTGTTGGACAGCCAGCCT
TTGATTTCAGGTGTG------GCTTTTAAGAAGACCTTCGCCTACGCCGGTTT----TGAGATGGCACCCAAGTCGTACGACAAG-----TGCAAGATCGCCCT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
......................CTTTTAAGAAGACCTTCGCCTACGCC........................................................2620.500.000.000.000.50
................................................................................ACAAC-----TGCAAGATCGGCCT1920.500.000.500.000.00
.....TTCAGGTGTG------GCTTTTAAGA.........................................................................2020.500.000.000.000.50
.TGATTTCGAGTGTG------GCT................................................................................1720.500.000.000.500.00
...................................CTTCGCCTACGCCGGTTT----TGA............................................2120.500.500.000.000.00
16 scaffold_13417:910774-910849 - 31.48
TCTAC-CTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATT----TTGACGAGTTTGTTGGACAGCCAGCCT
TCCCCGCCCTGGAGCTGGCCAACGCCC-A------GCGCAAGC--------------------CCCTGGTCATCATCGCCGAGGACATCGATGGCGAGGC--CTT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..........................................................................ATCGCCGAGGACATCGATGGCGA........2320.500.000.000.000.50
.....................................................................TCATCATCGCCGAGGACATC................2020.500.000.000.000.50
....CGCCCTGGAGCTGGTCAGC..................................................................................1920.500.000.500.000.00
3 scaffold_13266:1223543-1223619 + 30.64
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGAC-----TTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCATCTTCTCGTGCCC----------------------------CGTGGACATCATTCAGACCGAGACCAAGGGCACCGTCCTGATCAAGTCGGCCGACGAGCTC
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
.................................................................GACCAAGGGCACCGTCCTGATT..................2220.500.000.500.000.00
4 scaffold_13266:15928605-15928605 + 1.02
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
T---------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
None None


droBip1 - 4 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000396431:582372-582471 + 75.46
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
GCTAATCTTGCTGTTTCCCAACGCGTCGAAATGACTGTGACTTATGCGTATTTGATGCCATATCACAGCCATTTTGACGAGTTTGGTGGACAGTCATAAC
SizeHit CountTotal Norm
10 scf7180000396580:815875-815974 - 44.8
TCTACCTCTGCTGTCTATTA-ACGCGTCAAAATGACTGTGAGCTATGTGGA-TTTGACTTCATATCACA-GCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TTTGATTCAGTTCTGCATCTCAGCTCCCAAAACGGATGTAAGTAGTCCTCAGTTTAAATCTTTG---TATCTTTTTTTGAGCTTTATTTCGTTTTTTTAGATG
SizeHit CountTotal Norm
3 scf7180000396583:477335-477392 + 17.76
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
AATGCCGAAGAAGATTGTCAACGCGAAGAT-TGCCTGC------------CTGGACTTCTCGCTGCAGAAG-----------------------------
SizeHit CountTotal Norm
6 scf7180000396730:2223102-2223116 + 9.18
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCATCTTCTCATGCC-------------------------------------------------------------------------------------
SizeHit CountTotal Norm
None None


dp4 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
11 chrXL_group1e:7000785-7000885 - 78.78
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAG-CCAGCCT
GCTACTGCTGCTGCACATTTACGCGTCAAAATGACTGTGAGCTATGTGTTTTTGATCTCATATCACAGCCATTTTGACGAGTTTGATGTGCAGTCCCACTC
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
............................................................TATCACAGCCATTTTGACGAGT...................22613385.832342.007238.673801.004.17
............................................................TATCACAGCCATTTTGACGAGTT..................2366412.672143.672476.671787.005.33
............................................................TATCACAGCCATTTTGATGAGTT..................2362601.8331.831499.501070.500.00
............................................................TATCACAGCCATTTTGACGAG....................216750.6774.17519.00155.502.00
............................................................TATCACAGCCATTTTGATGAGT...................226641.6712.17212.83416.670.00
............................................................TATCACAGCCATTTTGACGAGTTT.................246435.67323.8338.5073.330.00
............................................................TATCACAGCCATTTTGACGAGTTA.................246178.1736.17127.1714.830.00
................................................................ACAGCCATTTTGACGAGT...................186125.3310.6778.8335.830.00
............................................................TATCACAGCCCTTTTGACGAGT...................22668.671.0059.508.170.00
............................................................TATCACAGCCATTTTGACGCGT...................22667.501.1747.3319.000.00
............................................................TATCACAGACATTTTGACGAGT...................22660.170.8351.338.000.00
............................................................TATCACAGCCATTTTGATGAG....................21654.170.838.1745.170.00
............................................................TATCACAGCCATTTTGACGA.....................20651.675.6731.8313.830.33
................................................................ACAGCCATTTTGACGAGTT..................19651.6710.3322.0019.330.00
............................................................TATCACAGCCATTTTGACGAGTTAA................25398.6719.0075.004.670.00
............................................................TATCACAGCCATTTTGACGAGC...................22639.335.1711.0023.170.00
............................................................TATCACAGCCATTTTGACGAGG...................22637.831.0030.506.330.00
............................................................TAGCACAGCCATTTTGACGAGT...................22634.670.1715.5019.000.00
............................................................TATCACAGCCATTTTGCCGAGT...................22634.671.5013.5019.670.00
............................................................TATCACAGCCATTTTGATGAGTTT.................24632.331.176.5024.670.00
............................................................TATCACAGCCATTTTGACGCGTT..................23631.673.6717.8310.000.17
............................................................TATCACAGCCATTTTGACGTGT...................22631.330.3324.007.000.00
............................................................TATCACAGCCATTTTGACGAGA...................22631.001.8319.0010.170.00
................................................................ACAGCCATTTTGATGAGTT..................19629.000.0015.1713.830.00
......................GCGTCAAAATGACTGTGAGCTATG.......................................................24279.5049.5018.5011.500.00
............................................................TATCACAGACATTTTGACGAGTT..................23625.670.1722.333.170.00
............................................................TATCACAGCCGTTTTGACGAGT...................22625.001.0017.676.330.00
............................................................TATCACAGCCATTTTGGCGAGT...................22623.672.0016.335.330.00
............................................................TATCACAGCCATTTTGACGAGCT..................23623.672.6712.838.170.00
............................................................TATCACAGCCAGTTTGACGAGT...................22623.170.0015.677.500.00
............................................................TATCACAGCCCTTTTGACGAGTT..................23623.001.0018.333.670.00
............................................................TATCACAGCCATTTTGTCGAGT...................22622.330.3318.333.670.00
.............................................................ATCACAGCCATTTTGACGAGTT..................22621.336.509.335.500.00
............................................................TATCACAGCCATTTTTACGAGT...................22620.330.6716.003.670.00
............................................................TATCACAGCCATTTTGACGGGT...................22619.332.8311.175.330.00
............................................................TATCACAGCCATTTTGACGAGTA..................23619.334.838.176.330.00
............................................................TATCACAGCCATTTTGACGAGTTC.................24619.3313.331.674.330.00
............................................................TATCACAGCCATTTTGCTGAGTT..................23618.670.008.0010.670.00
............................................................TATCACAGCCATTTTGATGAGCT..................23618.170.0012.176.000.00
............................................................TATCACAGCCATTTTGACAAGT...................22618.000.678.508.830.00
............................................................TACCACAGCCATTTTGACGAGT...................22618.001.177.339.500.00
............................................................TATCACAGCCATTTTGACGAGGT..................23617.830.0015.832.000.00
............................................................TATCACAGTCATTTTGACGAGT...................22617.670.5014.332.830.00
............................................................TATCGCAGCCATTTTGACGAGT...................22617.171.839.675.670.00
............................................................TATCAAAGCCATTTTGACGAGT...................22617.001.1714.331.500.00
...........................................................CTATCACAGCCATTTTGACGAGT...................23616.832.0010.174.670.00
............................................................TATAACAGCCATTTTGACGAGT...................22616.501.8311.503.170.00
............................................................TATCACAGCCATTTTGACTAGT...................22616.002.677.675.500.17
............................................................TATCACGGCCATTTTGACGAGT...................22615.503.508.333.670.00
............................................................TATCACAGCAATTTTGACGAGT...................22615.330.8310.504.000.00
............................................................TATCACAGCCATCTTGACGAGT...................22615.171.6710.503.000.00
............................................................TATCACAGCCATTTTGCCGAGTT..................23615.171.334.679.170.00
............................................................TATCACAGCCATTTTGACGTGTT..................23615.000.509.674.830.00
............................................................TAGCACAGCCATTTTGACGAGTT..................23614.830.004.6710.170.00
............................................................TATCACAGACATTTTGATGAGTT..................23614.170.0012.501.670.00
............................................................TATCACAGCCATTTCGACGAGT...................22613.831.836.505.500.00
............................................................TATCACAGCCATTTTGAAGAGT...................22613.670.509.503.670.00
............................................................CATCACAGCCATTTTGACGAGT...................22613.171.507.833.830.00
............................................................TATCACAGCTATTTTGACGAGT...................22612.830.509.502.830.00
............................................................TATCACAGCCATTTTGATGCGTT..................23612.500.006.675.830.00
............................................................TATCACAGCCTTTTTGACGAGT...................22612.330.179.003.170.00
.............................................................ATCACAGCCATTTTGACGAGT...................21611.833.335.173.330.00
............................................................TAACACAGCCATTTTGACGAGT...................22611.670.173.338.170.00
............................................................TATCACAGCCACTTTGACGAGT...................22611.671.836.673.170.00
............................................................TATCACAGCCATTTTAACGAGT...................22611.500.836.504.170.00
............................................................TATCACAGCCGTTTTGATGAGTT..................23611.500.671.839.000.00
............................................................TATCACAGCCATTTTGGCGAGTT..................23611.332.676.172.500.00
............................................................TATCACGGCCATTTTGATGAGTT..................23611.170.331.839.000.00
...........................................................CTATCACAGCCATTTTGACGAGTT..................24611.174.503.832.830.00
............................................................TATTACAGCCATTTTGACGAGT...................22610.671.507.172.000.00
............................................................TATCACAGCCATTTTGACGAGTC..................23610.333.003.673.500.17
............................................................TGTCACAGCCATTTTGACGAGT...................22610.171.335.173.670.00
............................................................TATCACAGCCATTTTGTCGAGTT..................2369.670.008.001.670.00
............................................................TATCACAGCCATTTTCACGAGT...................2269.671.334.833.500.00
............................................................TATCACAGCCATTTTGACGATT...................2269.670.833.835.000.00
............................................................TATCACAGCCATTTTGATGAGGT..................2369.330.008.171.170.00
............................................................TATCATAGCCATTTTGACGAGT...................2269.171.336.001.830.00
............................................................TATCACAGGCATTTTGACGAGT...................2268.830.178.000.670.00
............................................................TATCACAGCCATTTTGACCAGT...................2268.831.674.173.000.00
............................................................TATCACAGCCATTTTGACGAGTTG.................2468.670.677.000.830.17
............................................................TATCACAGCCATTTTGACG......................1968.670.003.673.501.50
............................................................GATCACAGCCATTTTGACGAGT...................2268.500.675.502.330.00
............................................................TATCACAGCCATTTTGACGACT...................2268.500.174.503.830.00
......................GCGTCAAAATGACTGTGAGCTAT........................................................23225.0019.004.002.000.00
............................................................TATCACAGCCGTTTTGACGAGTT..................2368.001.004.332.670.00
............................................................TATCACAGCCATTTTTACGAGTT..................2368.000.174.673.170.00
............................................................TATCACAGCCATTTTGGTGAGTT..................2368.000.175.172.670.00
............................................................TATCACAACCATTTTGACGAGT...................2267.830.505.831.500.00
............................................................TATCAAAGCCATTTTGACGAGTT..................2367.830.675.671.500.00
............................................................TATCACAGCCATTTTGACAAGTT..................2367.830.673.174.000.00
............................................................TACCACAGCCATTTTGACGAGTT..................2367.671.832.673.170.00
................................................................ACAGCCATTTTGATGAGT...................1867.330.002.175.170.00
............................................................TATCACAGCCATGTTGACGAGT...................2267.330.005.671.500.17
............................................................TATCACAGCCAGTTTGACGAGG...................22314.330.0012.332.000.00
............................................................TATCACAGCCATTTTGATGTGTT..................2367.170.005.172.000.00
............................................................TATCACGGCCATTTTGACGAGTT..................2367.172.003.172.000.00
............................................................TATCACAGCCATTTTGACGAAT...................2267.000.674.002.330.00
............................................................TATCACAGCCAGTTTGACGAGTT..................2367.000.004.172.830.00
............................................................TATCACAGCCATTTTGACGAGTAA.................24314.005.008.330.670.00
............................................................TATCACAGCCATTGTGACGAGT...................2267.000.003.833.170.00
............................................................AATCACAGCCATTTTGACGAGT...................2266.830.005.331.500.00
10 chr4_group4:313709-313739 - 5.38
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCTCATCCAATTCTGTATTTCGGCACCAAAA---------------------------------------------------------------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body


droPer1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
6 super_13:1553253-1553353 + 78.78
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAG-CCAGCCT
GCTACTGCTGCTGCACATTTACGCGTCAAAATGACTGTGAGCTATGTGTTTTTGATCTCATATCACAGCCATTTTGACGAGTTTGATGTGCAGTCCCACTC
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
............................................................TATCACAGCCATTTTGACGAGT...................22612025.67666.001602.503886.175811.1759.83
............................................................TATCACAGCCATTTTGACGAGTT..................2365962.83566.17639.831545.833183.3327.67
............................................................TATCACAGCCATTTTGATGAGTT..................2362396.3316.67379.831096.00901.002.83
............................................................TATCACAGCCATTTTGATGAGT...................226773.835.3360.50396.67310.500.83
............................................................TATCACAGCCATTTTGACGAG....................216500.0018.67159.33153.33150.3318.33
............................................................TATCACAGCCATTTTGACGAGTTT.................246288.5061.8312.8349.50164.330.00
................................................................ACAGCCATTTTGACGAGT...................186126.000.3318.5040.0067.000.17
............................................................TATCACAGCCATTTTGACGAGTTA.................246109.839.3352.1712.8334.171.33
............................................................TATCACAGCCATTTTGACGAGC...................22692.670.832.1727.3361.331.00
............................................................TATCACAGCCATTTTGACGCGT...................22677.170.0012.1722.3342.670.00
............................................................TATCACAGCCATTTTGATGAG....................21672.000.501.5042.8327.000.17
............................................................TAGCACAGCCATTTTGACGAGT...................22664.830.000.836.8357.170.00
............................................................TATCACAGCCATTTTGATGAGTTT.................24659.171.330.8325.5031.500.00
................................................................ACAGCCATTTTGACGAGTT..................19653.670.676.3315.3331.170.17
............................................................TATCACAGCCATTTTGACGA.....................20651.831.6721.3312.3313.832.67
............................................................TATCACAGCCATTTTGCCGAGT...................22651.500.002.0015.8333.670.00
............................................................TATCACAGCCATTTTGACGCGTT..................23648.330.335.0011.5031.500.00
............................................................TATCACAGCCATTTTGACGTGT...................22639.670.004.503.5031.670.00
............................................................TATCACAGCCCTTTTGACGAGT...................22635.500.1712.505.6717.170.00
............................................................TATCACAGCCATTTTGACGAGCT..................23633.670.671.007.1724.670.17
............................................................TAGCACAGCCATTTTGACGAGTT..................23633.330.000.831.6730.830.00
......................GCGTCAAAATGACTGTGAGCTATG.......................................................24296.5047.506.0010.5031.501.00
............................................................TATCACAGCCATTTTGACGAGTTAA................25362.673.0047.002.009.331.33
............................................................TATCACAGCCATTTTGACGAGA...................22628.500.173.0012.1713.000.17
............................................................TATCACAGCCATTTTTACGAGT...................22628.170.832.175.8319.330.00
............................................................TATCACAGACATTTTGACGAGT...................22627.670.504.832.6719.670.00
............................................................TATCACAGCCAGTTTGACGAGT...................22627.500.000.503.1723.830.00
............................................................TATCACAGCCATTTTGACGAGG...................22627.000.172.673.3316.834.00
............................................................TATCACAGCCATTTTGCCGAGTT..................23626.500.001.335.3319.830.00
............................................................TATCACAGCCATTTTGACGTGTT..................23624.830.171.831.5021.330.00
............................................................TATCACAGCCATTTTCACGAGT...................22624.670.171.334.3318.830.00
................................................................ACAGCCATTTTGATGAGTT..................19624.500.002.6711.6710.170.00
............................................................TATCACAGCCGTTTTGACGAGT...................22623.830.832.004.0017.000.00
............................................................TATCACAGCCATTTTGACTAGT...................22623.000.671.005.5014.501.33
............................................................TATCACAGCCATTTTGACGATT...................22620.670.170.834.6715.000.00
............................................................TATCACAGCCATTTTGTCGAGT...................22620.500.502.332.6715.000.00
............................................................TATCAGAGCCATTTTGACGAGT...................22620.000.000.3313.676.000.00
............................................................TATCACAGCCATTTTAACGAGT...................22618.670.331.176.3310.830.00
.............................................................ATCACAGCCATTTTGACGAGTT..................22618.503.330.505.679.000.00
............................................................TATCACAGCCATTTTGACAAGT...................22618.330.332.009.836.170.00
............................................................TATCACAGCCATTTTGACGGGT...................22618.000.671.174.1712.000.00
............................................................TATCACAGCCACTTTGACGAGT...................22617.830.332.174.5010.830.00
............................................................TATCACAGACATTTTGACGAGTT..................23617.670.174.671.3311.500.00
............................................................TATAACAGCCATTTTGACGAGT...................22617.670.172.001.3314.170.00
............................................................TATCACAGCCATTTTGACGAGTTC.................24617.339.500.333.004.330.17
............................................................TATCACAGCCATTTTGGCGAGT...................22617.000.332.503.1711.000.00
............................................................TATCGCAGCCATTTTGACGAGT...................22616.671.001.505.508.500.17
............................................................TATCACAGCCATTTTGTCGAGTT..................23616.500.001.001.8313.670.00
............................................................TATCACAGCCCTTTTGACGAGTT..................23616.500.175.502.838.000.00
............................................................TATCACGGCCATTTTGATGAGTT..................23616.170.170.837.337.830.00
............................................................TATCACAGCCATTTTGACGAGTA..................23616.170.504.174.007.500.00
............................................................TATCACAGCCATTTTGCTGAGTT..................23616.000.001.835.508.670.00
............................................................TATCACAGCCATTTTGATGAGCT..................23615.170.001.176.837.170.00
............................................................TATCACAGCCAGTTTGACGAGTT..................23614.500.000.831.6712.000.00
............................................................TAGCACAGCCATTTTGATGAGTT..................23614.330.000.001.6712.670.00
............................................................TATCACAGCCTTTTTGACGAGT...................22614.000.001.002.5010.500.00
............................................................TATCAAAGCCATTTTGACGAGT...................22614.000.000.507.176.330.00
............................................................TATCACAGCCATTTTTACGAGTT..................23613.830.170.671.8311.170.00
............................................................TATCACAGCCATTTCGACGAGT...................22613.500.330.674.837.670.00
............................................................TATCACAGCAATTTTGACGAGT...................22613.170.171.502.009.500.00
............................................................TACCACAGCCATTTTGACGAGT...................22613.170.331.503.677.670.00
............................................................TATCACAGCCGTTTTGACGAGTT..................23613.000.171.002.679.170.00
............................................................CATCACAGCCATTTTGACGAGT...................22612.670.331.003.008.330.00
...........................................................CTATCACAGCCATTTTGACGAGT...................23612.500.171.833.676.830.00
............................................................TATCACAGTCATTTTGACGAGT...................22612.330.331.832.337.830.00
............................................................TATCACAGCCATTTTCACGAGTT..................23612.170.000.502.679.000.00
............................................................TATCACATCCATTTTGACGAGT...................22612.171.331.002.676.830.33
............................................................TATCACAGCCATTTTGACGAGTC..................23612.001.000.671.838.330.17
............................................................TATCACGGCCATTTTGACGAGT...................22611.830.331.332.677.500.00
............................................................TATCACAGCCATTTTGACGACT...................22611.830.000.172.009.670.00
............................................................TATCACAGCCATGTTGACGAGT...................22611.830.000.171.0010.170.50
............................................................TATCACAGCCATTCTGACGAGT...................22611.170.330.672.337.830.00
............................................................TATCACACCCATTTTGACGAGT...................22611.000.330.832.507.170.17
............................................................TATCACAGCCATTGTGACGAGT...................22611.000.001.331.008.670.00
............................................................TATCATAGCCATTTTGACGAGT...................22611.000.171.336.832.670.00
............................................................TATCACAGCCATCTTGACGAGT...................22610.830.670.333.336.500.00
............................................................TATCACAGCCATTTTGGCGAGTT..................23610.830.501.001.178.170.00
............................................................TATCACAGCCATTTTGAAGAGT...................22610.670.001.833.005.830.00
............................................................TAACACAGCCATTTTGACGAGT...................22610.500.170.831.008.500.00
............................................................AATCACAGCCATTTTGACGAGT...................22610.330.170.831.837.500.00
.............................................................ATCACAGCCATTTTGACGAGT...................21610.331.170.173.335.670.00
............................................................TATCACAGCCGTTTTGATGAGTT..................23610.330.330.175.504.330.00
............................................................TATCACAGCCATTTTGACGAGTTG.................24610.170.004.671.501.832.17
............................................................TATCACAGCCATTTTGATGCGTT..................23610.170.001.503.675.000.00
................................................................ACAGCCATTTTGATGAGT...................1869.670.000.505.174.000.00
............................................................GATCACAGCCATTTTGACGAGT...................2269.500.502.331.175.500.00
............................................................TATCACAGCCATTTTGCCGCGT...................22319.000.000.674.0014.330.00
............................................................TATCACAGCCATTTTGACG......................1969.330.001.502.333.502.00
............................................................TATCACAGCCATTTTGACTAGTT..................2369.330.330.331.337.170.17
............................................................TATCACAGCCATTTTGACGGGTT..................2369.330.330.831.676.500.00
............................................................TATCACAGCCACTTTGACGAGTT..................2369.170.500.501.676.330.17
............................................................TATCACAGCTATTTTGACGAGT...................2269.170.000.333.335.500.00
............................................................TATCACAGCCATTTTGACGAGGT..................2368.670.001.501.176.000.00
............................................................TATCAGAGCCATTTTGACGAGTT..................2368.670.000.334.503.830.00
............................................................TATCACAGCCATTTTGACCAGT...................2268.500.170.332.175.830.00
............................................................TATCACAGCCATTTTGACGATTT..................2368.500.500.171.506.330.00
............................................................TATCACAACCATTTTGACGAGT...................2268.330.000.832.175.330.00
............................................................TATCACAGCCATTTTGATGTGTT..................2368.330.001.671.505.170.00
............................................................TGTCACAGCCATTTTGACGAGT...................2268.000.170.502.005.330.00
............................................................CATCACAGCCATTTTGACGAGTT..................2367.830.830.502.673.830.00
............................................................TATCACAGCAATTTTGACGAGTT..................2367.830.330.831.675.000.00
7 super_68:124358-124456 + 40.71
TCTACCTCTGCTGTCTATTAACGCGTCAAAATG-ACTGTGAGC----------------------------TATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCTCATCCAATTCTGTATTTCGGCACCAAAAACCGATGTGAGTAGGAGAAAACTTCCAGCAGAGGTTCAGGTT------------TCCATATGTGATCTCCTTTAC------------------AGATG
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
..TCATCCAATTCTGTATTTCGGC.........................................................................................................2220.500.000.000.000.000.50
...CATCCAATTCTGTATTTCGGC.........................................................................................................2120.500.000.000.000.000.50


droWil1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
8 scaffold_181089:4662176-4662263 - 43.62
TCTACCTCTGCTGTCTATTAACGCGT-CAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TTTTCCTATGCTGGCTTTGAGATGGCCCCCAAAGCCTATGAGAAGTGCAAGATTGCCTTGCTCAACATTGAAT-------------TGGAGCTGAAGGCAG
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.............................................................TTAACAxTGAAT-------------TGGAGCT........1824.000.003.000.001.00
.................................................................CATTGAAT-------------TGGAGCTGAAGGCA.2221.000.001.000.000.00
.......ATGCTGGCTTTGAGATGGC...........................................................................1921.000.001.000.000.00
...................................CTATGAGAAGTGCAAGATTGCCTTGCT.......................................2721.000.001.000.000.00
..................................................................ATTGAAT-------------TGGAGCTGAAGGC..2021.000.000.001.000.00
..........................................................TGCTCAACATTGAAT-------------TGGA...........1920.500.000.500.000.00
....................................TATGAGAAGTGCAAGATTGCCTTGCT.......................................2620.500.000.500.000.00
..................................................................ATTGAAT-------------TGGAGCTGAAGG...1920.500.500.000.000.00
................TTGAGATGGCCCCCAAAGC..................................................................1920.500.000.500.000.00
..............................................................CAACATTGAAT-------------TGGAGCTGAAGGC..2420.500.000.500.000.00
.................................GCCTATGAGAAGTGCAAGACTGC.............................................2320.500.000.500.000.00
TTTTCCTATGCTGGCTTTGAGATGCC...........................................................................2620.500.000.500.000.00
...................................CTATGAGAAGTGCAAGATTGCCTT..........................................2420.500.000.500.000.00
................................AGCCTATGAGAAGTGCAA...................................................1820.500.000.500.000.00
...................................CTATGAGAAGTGCAAGATTGCCT...........................................2320.500.000.500.000.00
...............................................................AACAxTGAAT-------------TGGAGCTAAA.....1920.500.000.500.000.00
....................GATGGCCCCCAAAGCCTACGAGAAG........................................................2520.500.000.500.000.00
..............................................................CAACATTGAAT-------------TGGAGCTGAAGGCA.2520.500.000.500.000.00
.......ATGCTGGCTTTGAGATGGCCCCC.......................................................................2320.500.000.500.000.00
..........................CCCCAAAGCCTATGAGAAG........................................................1920.500.000.500.000.00
3 scaffold_180777:2053037-2053171 + 41.56
TC---------------------------------TACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGAT-----TTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCCCCCAATGTACCTACCCCTGCAACTGCTGTGCTTACAACTGATGTCCATGGTCGCGTCAAAATGACTGTGAGCTATGTTAACCGGTCAGAAATTCATATCACAGCCATTTTGACGAGTTCGATGGGCATACGA---
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..................................................................................................TATCACAGCCATTTTGACGAGT..................226131656.331296.1761401.5067998.00960.67
..................................................................................................TATCACAGCCATTTTGACGAGTT.................23620813.67691.8315726.504235.00160.33
..................................................................................................TATCACAGCCATTTTGATGAGTT.................2368829.3343.006642.672102.5041.17
..................................................................................................TATCACAGCCATTTTGACGAG...................2167265.1741.171531.675134.83557.50
..................................................................................................TATCACAGCCATTTTGATGAGT..................2261688.008.33606.831043.0029.83
..................................................................................................TATCACAGCCATTTTGACGAGTTA................2461162.335.171141.8315.000.33
..................................................................................................TATCACAGCCATTTTGACGAGTTAA...............2531458.332.001452.333.330.67
..................................................................................................TATCACAGCCATTTTGACGAGTTT................246541.8359.83301.17179.001.83
..................................................................................................TATCACATCCATTTTGACGAGT..................226394.331.67270.17120.502.00
..................................................................................................TATCACAGCCATTTTGACGA....................206386.833.3354.67304.8324.00
..................................................................................................TATCACAGCCATTTTGACGAGC..................226381.674.0089.00256.3332.33
..................................................................................................TATCACAGCCATTTTGACTAGT..................226347.501.83203.67138.333.67
..................................................................................................TATCACAGACATTTTGACGAGT..................226293.500.5085.33206.830.83
..................................................................................................TATCACAGCAATTTTGACGAGT..................226287.330.0077.83209.500.00
..................................................................................................TATAACAGCCATTTTGACGAGT..................226279.330.1781.33197.830.00
..................................................................................................CATCACAGCCATTTTGACGAGT..................226276.831.1758.33217.170.17
..................................................................................................TATCACAGCCATTTTGAAGAGT..................226259.000.3336.33222.170.17
..................................................................................................TATCACAGCCCTTTTGACGAGT..................226233.004.0070.67158.170.17
......................................................................................................ACAGCCATTTTGACGAGT..................186219.330.6794.67120.004.00
..................................................................................................TATCACAGCCATTTTGACAAGT..................226217.501.3357.50157.671.00
..................................................................................................TATCACAGCCATTTTGACGAGTTAAA..............262642.500.50641.500.500.00
..................................................................................................TATCAAAGCCATTTTGACGAGT..................226206.830.1721.00185.500.17
..................................................................................................TATCACAGCCATTTTGACGAGA..................226195.001.0047.33142.674.00
..................................................................................................TATCACAGCCATTTTTACGAGT..................226183.830.33129.3353.330.83
..................................................................................................TATCACAGCCATTTTGATGAG...................216179.830.3319.17121.3339.00
..................................................................................................TATCACAACCATTTTGACGAGT..................226179.670.5026.33152.330.50
..................................................................................................TATCACAGCCATTTTGACG.....................196175.330.173.5089.6782.00
..................................................................................................TACCACAGCCATTTTGACGAGT..................226159.832.1759.1798.000.50
..................................................................................................TATCACAGCCATTTCGACGAGT..................226152.331.5056.6793.670.50
..................................................................................................TATCGCAGCCATTTTGACGAGT..................226149.172.1765.5080.670.83
..................................................................................................TATCACAGCCAxTTTGACGAGT..................216148.831.6764.1783.000.00
..................................................................................................TATCACAGCCATTTTGACGAGG..................226148.670.0037.3352.5058.83
..................................................................................................TATCACACCCATTTTGACGAGT..................226147.002.0058.3386.330.33
..................................................................................................TATCACAGCCACTTTGACGAGT..................226137.831.0043.0093.330.50
..................................................................................................TATCACAGCCATCTTGACGAGT..................226135.000.5053.6779.671.17
..................................................................................................TATCACAGCCATTTTGACGAAT..................226132.671.5019.33111.670.17
..................................................................................................AATCACAGCCATTTTGACGAGT..................226132.330.008.67123.670.00
..................................................................................................TATCACGGCCATTTTGACGAGT..................226129.832.0055.8370.831.17
..................................................................................................TATCACAGCCATTTTGACGGGT..................226126.670.6758.5067.500.00
.................................................................................................CTATCACAGCCATTTTGACGAGT..................236125.830.5059.1766.170.00
...................................................................................................ATCACAGCCATTTTGACGAGT..................216123.671.0030.8391.000.83
..................................................................................................TATCACAGCCATTTTGGCGAGT..................226123.331.5053.1768.670.00
..................................................................................................TATCACAGCCATTTTAACGAGT..................226122.330.3323.6798.170.17
..................................................................................................TATCACAGCCATTTTGACGAGTTC................243237.0027.3353.33148.677.67
..................................................................................................TATCACAGCCATTTTGCCGAGT..................226114.671.0025.6788.000.00
..................................................................................................TATCACAGCCATTTTGACGCGT..................226100.831.6731.1767.670.33
..................................................................................................TATTACAGCCATTTTGACGAGT..................22698.830.5034.0063.830.50
..................................................................................................TATCATAGCCATTTTGACGAGT..................22696.170.6732.3363.000.17
..................................................................................................TATCACAGCCGTTTTGACGAGT..................22694.000.3337.5055.330.83
..................................................................................................TATCACAGCCATTTTGACCAGT..................22689.671.6732.6753.332.00
..................................................................................................GATCACAGCCATTTTGACGAGT..................22688.170.008.5079.670.00
..................................................................................................TATCACAGCCATTCTGACGAGT..................22685.831.6727.1756.830.17
..................................................................................................TATCACATCCATTTTGACGAGTT.................23680.000.8369.838.830.50
..................................................................................................TATCCCAGCCATTTTGACGAGT..................22677.330.1724.5052.670.00
....................................................................................................TCACAGCCATTTTGACGAGT..................20675.170.5026.5048.170.00
..................................................................................................TATCACAGCCATTTTGACGAGTA.................23673.830.5058.5014.330.50
..................................................................................................TATCACAGTCATTTTGACGAGT..................22672.830.5027.5044.670.17
..................................................................................................TATCACAGCCAxxTTGACGAGT..................203144.672.0046.6795.330.67
..................................................................................................TATCACAGCCATTTTCACGAGT..................22671.171.0027.0042.500.67
..................................................................................................TATCACAGCCATTTTGACGAGTTG................24670.330.3344.5015.679.83
.......................................................GCGTCAAAATGACTGTGAGCTATG...........................................................242211.0061.00111.5037.501.00
..................................................................................................TCTCACAGCCATTTTGACGAGT..................22666.670.3320.3346.000.00
..................................................................................................TATCACAGCTATTTTGACGAGT..................22665.830.5027.0038.170.17
...................................................................................................ATCACAGCCATTTTGACGAGTT.................22665.171.5046.1717.170.33
..................................................................................................TATCACAGCCATTTTGACGACT..................22661.670.3326.0035.170.17
..................................................................................................TATCACAGCCATTTTGACGATT..................22661.330.0035.6725.330.33
..................................................................................................TGTCACAGCCATTTTGACGAGT..................22661.000.3327.5032.670.50
.................................................................................................ATATCACAGCCATTTTGACGAG...................22655.670.0025.3327.173.17
..................................................................................................TATCACGGCCATTTTGATGAGTT.................23653.502.177.5041.502.33
..................................................................................................TATCACAGCCATTTTGACGATTT.................23648.000.8337.1710.000.00
..................................................................................................TATCACAGCCATTTTGACGAGTAA................24394.330.3391.332.670.00
....................................................................................................TATCAGCCATTTTGACGAGT..................20388.670.6746.0042.000.00
..................................................................................................TATCACATCCATTTTGATGAGTT.................23642.500.0038.504.000.00
..................................................................................................TATCACAGCCATTTTGACTAGTT.................23638.670.3333.673.671.00
..................................................................................................TATCACAGCCATTTTGACGAGTTCC...............25638.501.330.8335.670.67
.....................................................................................................CACAGCCATTTTGACGAGT..................19637.830.505.0032.330.00
..................................................................................................TATCACAGCCAATTTGACGAGT..................22635.830.504.1731.170.00
..................................................................................................TATCACAGACATTTTGACGAGTT.................23635.170.0023.1711.670.33
..................................................................................................TATCACAGCCATATTGACGAGT..................22634.170.009.5022.502.17
..................................................................................................TATCACAGCAATTTTGACGAGTT.................23633.330.1719.8313.330.00
..................................................................................................TATCACAGCCATTTTGACGTGT..................22631.670.0013.3318.330.00
..................................................................................................TATCACAGCCATTTTTACGAGTT.................23631.500.0029.671.670.17
..................................................................................................TATAACAGCCATTTTGACGAGTT.................23630.500.0018.5012.000.00
..................................................................................................TATCACCGCCATTTTGACGAGT..................22630.170.1721.178.830.00
..................................................................................................TATCACAGCCATTTAGACGAGT..................22629.330.004.1725.170.00
..................................................................................................TATCACAGCCATTTTGAAGAGTT.................23628.330.0011.8316.500.00
..................................................................................................TATCACAGCCATTTTGTCGAGT..................22628.000.339.5018.170.00
......................................................................................................ACAGCCATTTTGACGAGTT.................19627.671.1720.334.671.50
..................................................................................................TAACACAGCCATTTTGACGAGT..................22627.330.338.5018.330.17
..................................................................................................CATCACAGCCATTTTGACGAGTT.................23627.000.0014.6712.330.00
..................................................................................................TATCGCAGCCATTTTGACGAGTT.................23626.670.5019.836.170.17
..................................................................................................TATCACAGCCATTTTGACGAGTC.................23626.671.5017.007.670.50
..................................................................................................TATCACAGCCATTTTGATGAGCT.................23626.330.1719.336.830.00
..................................................................................................TATCACAGCCATTTTGACGAGCT.................23624.671.5017.175.830.17
..................................................................................................TATCACAGCCATTTTGACGAGTTAG...............25349.000.0048.330.670.00
..................................................................................................TATCACAGCCATTTTGGCGAGTT.................23624.170.8317.505.670.17
..................................................................................................TATCACAGCCATTTTGACGAC...................21623.830.170.833.1719.67
..................................................................................................TATCACACCCATTTTGACGAGTT.................23622.670.8316.005.830.00
.................................................................................................CTATCACAGCCATTTTGACGAGTT.................24622.330.1717.674.500.00
..................................................................................................TACCACAGCCATTTTGACGAGTT.................23622.170.5014.507.170.00
..................................................................................................TATCACAGCCATTATGACGAGT..................22621.830.334.8316.500.17


droVir3 - 6 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scaffold_12970:9304312-9304422 + 68.4
TCTACCTCTGCTGTC---------TATTAACGCGTCAAAATGACTGTGAGCTATGT----GGATTTGAC-TTCATATCACAGCCATTTTGACGAGTTTGTTG-GACAGCCAGCCT
TCTCTCGCTGCTGCCAATGCTCCATATTGGCGCGTCAAAATGACTGTGAGCTATGTTGTTGCATTTGCCATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCCA----
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..........................................................................TATCACAGCCATTTTGACGAGT...................2288639.132698.254153.881684.8821.3880.75
..........................................................................TATCACAGCCATTTTGACGAGTT..................2384037.381701.381674.25631.137.1323.50
..........................................................................TATCACAGCCATTTTGATGAGTT..................238983.7543.75705.50231.250.253.00
..........................................................................TATCACAGCCATTTTGACGAGTTT.................248485.00313.63121.1349.750.130.38
..........................................................................TATCACAGCCATTTTGACGAG....................218402.2578.50185.2568.8816.3853.25
..........................................................................TATCACAGCCATTTTGATGAGT...................228362.009.50331.6316.000.004.88
..........................................................................TATCACAGCCATTTTGACGAGTTC.................248120.7595.5014.638.881.380.38
..........................................................................TATCACAGCCATTTTGACGAGTTA.................24898.2525.0018.2554.130.130.75
..........................................................................TATCACAGCCATTTTGACGCGT...................22878.501.7559.0017.500.130.13
..............................................................................ACAGCCATTTTGACGAGT...................18869.382.5048.2518.500.000.13
..........................................................................TATCACAGCCATTTTGACGAGC...................22855.756.2540.503.750.754.50
..........................................................................TATCACAGCCATTTTGACGAGTTAA................25585.2011.604.0069.400.200.00
...............................GCGTCAAAATGACTGTGAGCTATG............................................................242202.50131.0043.5027.001.000.00
..........................................................................TATCACAGCCATTTTGACGCGTT..................23844.501.1334.758.500.130.00
..........................................................................TATCACAGCCATTTTGACG......................19837.130.135.630.384.3826.63
..........................................................................TATCACAGCCATTTTGACGA.....................20835.756.6320.882.880.884.50
..........................................................................TATCACAGCCATTTTTACGAGT...................22835.251.137.6326.380.000.13
..........................................................................TATCACAGCCATTTTGATGAG....................21834.381.0024.381.130.257.63
..........................................................................TAGCACAGCCATTTTGACGAGT...................22832.630.3830.501.750.000.00
..........................................................................TATCACAGCCATTTTGACGAGG...................22830.506.889.256.131.137.13
..............................................................................ACAGCCATTTTGACGAGTT..................19827.631.7519.636.130.000.13
..........................................................................TATCACAGCCATTTTGACTAGT...................22826.383.257.2515.630.000.25
..........................................................................TATCACAGCCCTTTTGACGAGT...................22824.382.888.2513.250.000.00
..........................................................................TATCACAGCCATTTTGACGAGTC..................23823.3814.255.003.250.250.63
..........................................................................TATCACAGCCATTTTGACGAGA...................22822.885.8812.254.130.250.38
..........................................................................TATCACAGCCATTTTGCCGAGT...................22822.501.1315.885.500.000.00
..........................................................................TATCACAGCCATTTTGATGAGTTT.................24821.252.0017.132.000.000.13
..........................................................................TATCACATCCATTTTGACGAGT...................22820.253.637.139.500.000.00
..........................................................................TATCACAGCCATTTTGACGAGCT..................23818.381.6313.503.250.000.00
..........................................................................TATCACAGCCATTTTGACGATT...................22817.630.756.8810.000.000.00
..........................................................................TATCACAGCCATTTTCACGAGT...................22816.632.5010.383.750.000.00
..........................................................................TATCACAGCCATTTTGACGTGT...................22816.380.6313.252.500.000.00
..........................................................................TATCACAGCCAGTTTGACGAGT...................22815.500.2512.632.630.000.00
..........................................................................TATCACAGCCATTTTGACGACT...................22815.131.1310.383.630.000.00
..........................................................................TATCACAGCCATTTTTACGAGTT..................23813.880.753.1310.000.000.00
..........................................................................TATCACAGACATTTTGACGAGT...................22813.750.139.883.750.000.00
..........................................................................TATCACAGCCATTTTGACGAGTA..................23813.637.003.253.130.000.25
..........................................................................TATCACAGCCGTTTTGACGAGT...................22812.751.258.632.630.000.25
..............................................................................ACAGCCATTTTGATGAGTT..................19812.250.009.382.750.130.00
..........................................................................TAGCACAGCCATTTTGACGAGTT..................23812.250.3811.380.500.000.00
..........................................................................TATCACAGCCATTTTGTCGAGT...................22811.750.6310.001.130.000.00
..........................................................................TATCACAGCCATTTTGACAAGT...................22811.502.385.883.250.000.00
..........................................................................TATCACAGCCCTTTTGACGAGTT..................23811.132.383.005.750.000.00
..........................................................................CATCACAGCCATTTTGACGAGT...................22811.132.506.382.000.130.13
..........................................................................TATCACAGCCATTTTGACGAGTTG.................24810.501.753.383.630.501.25
..........................................................................TATCACAGCCATTTCGACGAGT...................22810.384.383.752.250.000.00
..........................................................................TATCACAGCCATTTTGGCGAGT...................22810.132.634.133.250.000.13
..........................................................................TATCACAGCCACTTTGACGAGT...................2289.882.634.382.880.000.00
..........................................................................TATCACAGCCATCTTGACGAGT...................2289.632.383.883.250.130.00
..........................................................................TACCACAGCCATTTTGACGAGT...................2289.382.133.883.380.000.00
..........................................................................TATCACAGCCATTTTGACGAGTTAAA...............26237.501.000.0036.500.000.00
..........................................................................TATCGCAGCCATTTTGACGAGT...................2289.382.754.751.880.000.00
..........................................................................TATCACACCCATTTTGACGAGT...................2289.252.752.254.250.000.00
..........................................................................TATCACAGCCATTTTGCCGAGTT..................2389.251.255.003.000.000.00
..........................................................................TATCACAGCCATTTTGACTAGTT..................2389.000.752.135.750.000.38
..........................................................................TATCACAGCCATTTTAACGAGT...................2289.002.134.632.130.130.00
..........................................................................TATCACAGCCATTTTGACGGGT...................2288.882.385.001.500.000.00
..........................................................................TATCACGGCCATTTTGATGAGTT..................2388.750.138.130.500.000.00
..........................................................................TATCACAGTCATTTTGACGAGT...................2288.631.006.251.250.130.00
..........................................................................TATCACAGCCATTCTGACGAGT...................2288.631.755.501.380.000.00
..........................................................................TATCACAGCCATGTTGACGAGT...................2288.630.007.501.130.000.00
..........................................................................TATCACAGCCATTTTGATGCGTT..................2388.630.007.251.380.000.00
..........................................................................TATCACAGCCATTTTGACGAGGT..................2388.502.883.382.250.000.00
.........................................................................CTATCACAGCCATTTTGACGAGT...................2388.382.253.752.380.000.00
..........................................................................TATCACAGCCATTTTGACGTGTT..................2388.380.136.881.380.000.00
..........................................................................TATCACAGCCATTTTGACGATTT..................2388.381.753.003.630.000.00
..........................................................................TATCACGGCCATTTTGACGAGT...................2288.251.634.382.130.000.13
..........................................................................TATCACAGCCATTTTGACGAGTAA.................24513.003.401.008.400.000.20
..........................................................................TATCACAGCCATTTTGACCAGT...................2288.131.752.753.500.000.13
..........................................................................TATCACAGCCATTTTGATGAGCT..................2388.130.006.501.630.000.00
..........................................................................TATCACATCCATTTTGACGAGTT..................2388.001.382.753.750.000.13
..........................................................................TATCACAGCCATTTTGACGCGC...................22511.600.0010.601.000.000.00
..........................................................................TATCACAGCCTTTTTGACGAGT...................2287.250.506.130.630.000.00
..........................................................................TATCACAGCCATTTTGAAGAGT...................2287.133.133.001.000.000.00
..........................................................................TATCACAGCCATTTTGATGAGTTC.................2486.884.130.881.880.000.00
..........................................................................TATCACCGCCATTTTGACGAGT...................2286.880.384.382.130.000.00
..........................................................................TATCACAGCCATTTTGTCGAGTT..................2386.750.135.631.000.000.00
..........................................................................GATCACAGCCATTTTGACGAGT...................2286.752.252.132.250.130.00
..........................................................................TATCACAGCCATTTTGATTAGTT..................2386.500.001.135.380.000.00
..........................................................................TATCAAAGCCATTTTGACGAGT...................2286.500.754.751.000.000.00
.........................................................................CTATCACAGCCATTTTGACGAGTT..................2486.001.252.752.000.000.00
...............................GCGTCAAAATGACTGTGAGCT...............................................................21223.507.502.500.001.0012.50
..........................................................................TATCACAGCCATTTTCACGAGTT..................2385.881.002.882.000.000.00
..........................................................................CATCACAGCCATTTTGACGAGTT..................2385.881.383.251.250.000.00
..........................................................................TATCACAGCCATTTTGATG......................1985.750.001.380.000.004.38
..........................................................................TGTCACAGCCATTTTGACGAGT...................2285.501.502.881.130.000.00
..........................................................................TATCACGGCCATTTTGATGAGT...................2285.500.135.380.000.000.00
..........................................................................TATAACAGCCATTTTGACGAGT...................2285.500.503.631.380.000.00
..........................................................................TATCACAGCCATTTTGGCGAGTT..................2385.501.252.631.630.000.00
..........................................................................TATCACAGCTATTTTGACGAGT...................2285.381.503.000.880.000.00
..........................................................................TATCACAACCATTTTGACGAGT...................2285.381.002.751.630.000.00
..........................................................................TATCACAGCCATTTTGACGGGTT..................2385.382.132.131.130.000.00
..........................................................................TATCACAGCCATTTTGACAAGTT..................2385.131.631.751.750.000.00
..........................................................................TATCACAGCCATTTTGACGACTT..................2385.131.253.000.880.000.00
..............................................................................ACAGCCATTTTGATGAGT...................1885.000.004.880.130.000.00
..........................................................................TATCACAGCCATTTTGCTGAGTT..................2385.000.002.752.250.000.00
..........................................................................TATCACAGCAATTTTGACGAGT...................2284.880.503.500.880.000.00
..........................................................................TATCACAGCCAGTTTGACGAGTT..................2384.880.133.880.880.000.00
..........................................................................TATCACAGCCATTTTAACGAGTT..................2384.751.252.750.750.000.00
..........................................................................TACCACAGCCATTTTGACGAGTT..................2384.751.751.631.380.000.00
..........................................................................TATCACAGCCATTTTGACGCG....................2184.630.133.880.500.000.13
6 scaffold_13047:13335799-13335872 + 57.86
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTG-GACAGCCAGCCT
-----------------------CGTTAAAATGCCTGTGACCT-TATGTATTTTATATCATATCACAGCCATTTTGACGAGTTTG--GGTAAAG-AAATCT
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
............................................................TATCACAGCCATTTTGACGAGT...................2288639.132698.254153.881684.8821.3880.75
............................................................TATCACAGCCATTTTGACGAGTT..................2384037.381701.381674.25631.137.1323.50
............................................................TATCACAGCCATTTTGATGAGTT..................238983.7543.75705.50231.250.253.00
............................................................TATCACAGCCATTTTGACGAGTTT.................248485.00313.63121.1349.750.130.38
............................................................TATCACAGCCATTTTGACGAG....................218402.2578.50185.2568.8816.3853.25
............................................................TATCACAGCCATTTTGATGAGT...................228362.009.50331.6316.000.004.88
............................................................TATCACAGCCATTTTGACGAGTTC.................248120.7595.5014.638.881.380.38
............................................................TATCACAGCCATTTTGACGAGTTA.................24898.2525.0018.2554.130.130.75
............................................................TATCACAGCCATTTTGACGCGT...................22878.501.7559.0017.500.130.13
................................................................ACAGCCATTTTGACGAGT...................18869.382.5048.2518.500.000.13
............................................................TATCACAGCCATTTTGACGAGC...................22855.756.2540.503.750.754.50
............................................................TATCACAGCCATTTTGACGAGTTAA--..............25585.2011.604.0069.400.200.00
............................................................TATCACAGCCATTTTGACGCGTT..................23844.501.1334.758.500.130.00
............................................................TATCACAGCCATTTTGACG......................19837.130.135.630.384.3826.63
............................................................TATCACAGCCATTTTGACGA.....................20835.756.6320.882.880.884.50
............................................................TATCACAGCCATTTTTACGAGT...................22835.251.137.6326.380.000.13
............................................................TATCACAGCCATTTTGATGAG....................21834.381.0024.381.130.257.63
............................................................TAGCACAGCCATTTTGACGAGT...................22832.630.3830.501.750.000.00
............................................................TATCACAGCCATTTTGACGAGG...................22830.506.889.256.131.137.13
................................................................ACAGCCATTTTGACGAGTT..................19827.631.7519.636.130.000.13
............................................................TATCACAGCCATTTTGACTAGT...................22826.383.257.2515.630.000.25
............................................................TATCACAGCCCTTTTGACGAGT...................22824.382.888.2513.250.000.00
............................................................TATCACAGCCATTTTGACGAGTC..................23823.3814.255.003.250.250.63
............................................................TATCACAGCCATTTTGACGAGA...................22822.885.8812.254.130.250.38
............................................................TATCACAGCCATTTTGCCGAGT...................22822.501.1315.885.500.000.00
............................................................TATCACAGCCATTTTGATGAGTTT.................24821.252.0017.132.000.000.13
............................................................TATCACATCCATTTTGACGAGT...................22820.253.637.139.500.000.00
............................................................TATCACAGCCATTTTGACGAGCT..................23818.381.6313.503.250.000.00
............................................................TATCACAGCCATTTTGACGATT...................22817.630.756.8810.000.000.00
............................................................TATCACAGCCATTTTCACGAGT...................22816.632.5010.383.750.000.00
............................................................TATCACAGCCATTTTGACGTGT...................22816.380.6313.252.500.000.00
............................................................TATCACAGCCAGTTTGACGAGT...................22815.500.2512.632.630.000.00
............................................................TATCACAGCCATTTTGACGACT...................22815.131.1310.383.630.000.00
............................................................TATCACAGCCATTTTTACGAGTT..................23813.880.753.1310.000.000.00
............................................................TATCACAGACATTTTGACGAGT...................22813.750.139.883.750.000.00
............................................................TATCACAGCCATTTTGACGAGTA..................23813.637.003.253.130.000.25
............................................................TATCACAGCCGTTTTGACGAGT...................22812.751.258.632.630.000.25
................................................................ACAGCCATTTTGATGAGTT..................19812.250.009.382.750.130.00
............................................................TAGCACAGCCATTTTGACGAGTT..................23812.250.3811.380.500.000.00
............................................................TATCACAGCCATTTTGTCGAGT...................22811.750.6310.001.130.000.00
............................................................TATCACAGCCATTTTGACAAGT...................22811.502.385.883.250.000.00
............................................................TATCACAGCCCTTTTGACGAGTT..................23811.132.383.005.750.000.00
............................................................CATCACAGCCATTTTGACGAGT...................22811.132.506.382.000.130.13
............................................................TATCACAGCCATTTTGACGAGTTG.................24810.501.753.383.630.501.25
............................................................TATCACAGCCATTTCGACGAGT...................22810.384.383.752.250.000.00
............................................................TATCACAGCCATTTTGGCGAGT...................22810.132.634.133.250.000.13
............................................................TATCACAGCCACTTTGACGAGT...................2289.882.634.382.880.000.00
............................................................TATCACAGCCATCTTGACGAGT...................2289.632.383.883.250.130.00
............................................................TATCGCAGCCATTTTGACGAGT...................2289.382.754.751.880.000.00
............................................................TACCACAGCCATTTTGACGAGT...................2289.382.133.883.380.000.00
............................................................TATCACACCCATTTTGACGAGT...................2289.252.752.254.250.000.00
............................................................TATCACAGCCATTTTGCCGAGTT..................2389.251.255.003.000.000.00
............................................................TATCACAGCCATTTTGACTAGTT..................2389.000.752.135.750.000.38
............................................................TATCACAGCCATTTTAACGAGT...................2289.002.134.632.130.130.00
............................................................TATCACAGCCATTTTGACGGGT...................2288.882.385.001.500.000.00
............................................................TATCACGGCCATTTTGATGAGTT..................2388.750.138.130.500.000.00
............................................................TATCACAGTCATTTTGACGAGT...................2288.631.006.251.250.130.00
............................................................TATCACAGCCATGTTGACGAGT...................2288.630.007.501.130.000.00
............................................................TATCACAGCCATTCTGACGAGT...................2288.631.755.501.380.000.00
............................................................TATCACAGCCATTTTGATGCGTT..................2388.630.007.251.380.000.00
............................................................TATCACAGCCATTTTGACGAGGT..................2388.502.883.382.250.000.00
............................................................TATCACAGCCATTTTGACGTGTT..................2388.380.136.881.380.000.00
............................................................TATCACAGCCATTTTGACGATTT..................2388.381.753.003.630.000.00
...........................................................CTATCACAGCCATTTTGACGAGT...................2388.382.253.752.380.000.00
............................................................TATCACGGCCATTTTGACGAGT...................2288.251.634.382.130.000.13
............................................................TATCACAGCCATTTTGACGAGTAA.................24513.003.401.008.400.000.20
............................................................TATCACAGCCATTTTGACCAGT...................2288.131.752.753.500.000.13
............................................................TATCACAGCCATTTTGATGAGCT..................2388.130.006.501.630.000.00
............................................................TATCACATCCATTTTGACGAGTT..................2388.001.382.753.750.000.13
............................................................TATCACAGCCTTTTTGACGAGT...................2287.250.506.130.630.000.00
............................................................TATCACAGCCATTTTGACGCGC...................22511.600.0010.601.000.000.00
............................................................TATCACAGCCATTTTGAAGAGT...................2287.133.133.001.000.000.00
............................................................TATCACAGCCATTTTGATGAGTTC.................2486.884.130.881.880.000.00
............................................................TATCACCGCCATTTTGACGAGT...................2286.880.384.382.130.000.00
............................................................GATCACAGCCATTTTGACGAGT...................2286.752.252.132.250.130.00
............................................................TATCACAGCCATTTTGTCGAGTT..................2386.750.135.631.000.000.00
............................................................TATCAAAGCCATTTTGACGAGT...................2286.500.754.751.000.000.00
............................................................TATCACAGCCATTTTGATTAGTT..................2386.500.001.135.380.000.00
...........................................................CTATCACAGCCATTTTGACGAGTT..................2486.001.252.752.000.000.00
............................................................TATCACAGCCATTTTCACGAGTT..................2385.881.002.882.000.000.00
............................................................CATCACAGCCATTTTGACGAGTT..................2385.881.383.251.250.000.00
............................................................TATCACAGCCATTTTGATG......................1985.750.001.380.000.004.38
............................................................TATCACAGCCATTTTGGCGAGTT..................2385.501.252.631.630.000.00
............................................................TATCACGGCCATTTTGATGAGT...................2285.500.135.380.000.000.00
............................................................TATAACAGCCATTTTGACGAGT...................2285.500.503.631.380.000.00
............................................................TGTCACAGCCATTTTGACGAGT...................2285.501.502.881.130.000.00
............................................................TATCACAGCCATTTTGACGGGTT..................2385.382.132.131.130.000.00
............................................................TATCACAACCATTTTGACGAGT...................2285.381.002.751.630.000.00
............................................................TATCACAGCTATTTTGACGAGT...................2285.381.503.000.880.000.00
............................................................TATCACAGCCATTTTGACGACTT..................2385.131.253.000.880.000.00
............................................................TATCACAGCCATTTTGACAAGTT..................2385.131.631.751.750.000.00
................................................................ACAGCCATTTTGATGAGT...................1885.000.004.880.130.000.00
............................................................TATCACAGCCATTTTGCTGAGTT..................2385.000.002.752.250.000.00
............................................................TATCACAGCAATTTTGACGAGT...................2284.880.503.500.880.000.00
............................................................TATCACAGCCAGTTTGACGAGTT..................2384.880.133.880.880.000.00
............................................................TATCACAGCCATTTTAACGAGTT..................2384.751.252.750.750.000.00
............................................................TACCACAGCCATTTTGACGAGTT..................2384.751.751.631.380.000.00
............................................................TATCACAGCCATTTTGACGCG....................2184.630.133.880.500.000.13
............................................................TATCACAGCCATTTTGACGAAT...................2284.502.130.881.500.000.00
............................................................TATCACAGCCATTATGACGAGT...................2284.501.632.130.750.000.00
............................................................TATCACACCCATTTTGACGAGTT..................2384.502.131.381.000.000.00
5 scaffold_12970:9305203-9305301 + 43.56
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCCATCATAGGTATATAGAAACG-GACAGATGGACGAAAGGATATCCCCTATATACTTTGTGTTTGTGCGAAAATACCAATGGTCGTTAATGAACACCAT
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
...................................................................................................T2132.000.000.000.000.002.00
...................................................................................................T2231.670.001.670.000.000.00
...................................................................................................T1931.000.000.000.000.001.00
...................................................................................................T2131.000.000.000.001.000.00
...................................................................................................T2430.670.000.670.000.000.00
...................................................................................................T2130.330.000.000.000.000.33
...................................................................................................T2130.330.000.000.000.000.33
......................G-GACAGATGGACGGAATG...........................................................1820.500.000.000.500.000.00
...................................................................................................T2230.330.000.330.000.000.00
3 scaffold_12963:3667406-3667530 + 30.73
TCTACCTCTGCTGTCTATT--------AACGCG----TCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATC-----ACAG----------CCATTTTGACGAGTTTGTTGGACAGCCAGCCT
GTCATCATAGCCGAGGATGTCGAGGGCGAGGCATTGAGCACCATGGTCGTGAATCGTCTGAAGGTGGGTCTGCAAGTGTGTGCCGTCAAGGCGCCTGGTTTCGGTGACAATC--GCAAGGAGACACT
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..........................................................TGAAGGTGGGTCTGCAAGTGTGTGCC...........................................2620.500.500.000.000.000.00
GTCATCATTGCCGAGGAC.............................................................................................................1820.500.000.000.000.000.50
.............AGGATGTCGAGGGCGAGGAAG.............................................................................................2120.500.500.000.000.000.00
.............................................................................GTATGCGGTCAAGGCGCC................................1820.500.000.000.000.000.50
1 scaffold_12822:633196-633263 + 24.93
TCTACCTCTGCTGTCTATT--AACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
CCTGCCTGGACTTCTCGCTGCAGAAGACCAAGATGAAAATGGGC-GTACAGG---------------------------------TATTGATCAATGATCCC
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
...............AGCTGCAGAAGACCAAGC.....................................................................1830.330.000.000.330.000.00
.................................................AGG---------------------------------TTTTGGTCAATGATCC.1920.500.000.500.000.000.00
.............CTCGCTGCAGAAGACCAAG......................................................................1920.500.000.000.500.000.00
15 scaffold_13246:2031842-2031906 - 23.21
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
GCTGATTCAGTTCTGCATTTCGGCACCGAAA--------ACCGATATGGATCACAATGTGATTGTCAGCGATT---------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..........................................GATATGGATCACAATGTGATTGTCAGC...............................2720.500.500.000.000.000.00
...........TCTGCATTTCGGCACCGAAA--------A............................................................2120.500.000.000.000.000.50


droMoj3 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
17 scaffold_6473:13342549-13342650 - 74.41
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACT-TCATATCACAGCCATTTTGACGAGTTTGTTG-GACAGCCAGCCT
TCCTCTAATGCTCCATATTTGCGCGTCAAATTGACTGTGAGCTATGTTTATGAGATTATCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCCACCAA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.............................................................TATCACAGCCATTTTGACGAGT...................22545481.409241.6010887.808710.4016641.60
.............................................................TATCACAGCCATTTTGACGAGTT..................23510026.003009.002369.201745.602902.20
.............................................................TATCACAGCCATTTTGATGAGTT..................2354757.20113.801503.60829.002310.80
.............................................................TATCACAGCCATTTTGACGAG....................2152052.00220.20301.00226.401304.40
.............................................................TATCACAGCCATTTTGATGAGT...................225774.0029.00344.20214.00186.80
.............................................................TATCACAGCCATTTTGACGAGTTT.................245759.00381.80177.80122.6076.80
..............................................................ATCACAGCCATTTTGACGAGTT..................225749.00251.40187.80119.40190.40
..............................................................ATCACAGCCATTTTGACGAGT...................215584.20195.00158.80127.40103.00
.................................................................ACAGCCATTTTGACGAGT...................185408.004.00127.0089.00188.00
.............................................................TATCACAGCCCTTTTGACGAGT...................225364.202.2020.60187.80153.60
.............................................................TATCACAGCCATTTTGACGCGT...................225359.202.0045.40198.40113.40
.............................................................TATCACAGCCATTTTGACGAGTTC.................245202.80138.6034.6026.003.60
.............................................................TATCACAGCCATTTTGACGAGTTA.................245182.2035.4016.8011.80118.20
.............................................................TATCACAGCCATTTTGCCGAGT...................225150.601.8046.6063.0039.20
.............................................................TATCACAGCCATTTTGACGA.....................205143.2024.0032.4029.0057.80
.............................................................TATCACAGCCATTTTGACGAGC...................225131.6012.8060.6026.4031.80
.............................................................TATCACAGCCATTTTTACGAGT...................225118.409.2020.4067.0021.80
..............................................................ATCACAGCCATTTTGACGAGTTT.................235118.0062.4028.4019.407.80
.............................................................TATCACAGACATTTTGACGAGT...................225113.202.8017.2010.6082.60
.............................................................TAGCACAGCCATTTTGACGAGT...................225108.200.6048.4038.6020.60
.............................................................TATCACAGCCATTTTGATGAGTTT.................24598.605.0052.8024.4016.40
.............................................................TATCACAGCCATTTTGACGCGTT..................23592.001.0013.6048.4029.00
.............................................................TATCACAGCCATTTTGACTAGT...................22590.0017.8018.8041.0012.40
.............................................................TATCACAGCCATTTTGACGAGTC..................23577.6040.6017.8011.807.40
.............................................................TATCACAGCCATTTTGACGAGG...................22576.203.4015.6015.2042.00
.................................................................ACAGCCATTTTGACGAGTT..................19575.601.0026.8023.2024.60
.............................................................TATCACAGCCGTTTTGACGAGT...................22574.403.2025.0016.8029.40
.............................................................TATCACAGCCCTTTTGACGAGTT..................23570.401.004.2034.8030.40
.............................................................TATCACAGCCATTTTGGCGAGT...................22568.404.6015.0014.2034.60
.............................................................TATCACAGCCATTTTGACGAGA...................22564.4010.8019.0010.4024.20
.............................................................TATCACAGCCATTTTGACGTGT...................22563.201.0024.4015.4022.40
.............................................................TATCACAGCCAGTTTGACGAGT...................22563.200.4028.4015.6018.80
.............................................................TATCACAGCCATTTTGACGAGTA..................23562.8011.008.008.0035.80
.............................................................TATCACAGCCATTTTGTCGAGT...................22561.801.4026.8012.2021.40
.............................................................TATCACAGCCATTTTGACGGGT...................22561.204.4017.0012.4027.40
.............................................................TATCACAGCCATTTTGACGAGTTAA................253101.6713.673.001.0084.00
.............................................................TATCACAGCCATTTTGACGATT...................22559.002.8016.2032.607.40
.............................................................TATCACAGCCATTTTCACGAGT...................22553.201.2024.2020.207.60
.............................................................TATCACATCCATTTTGACGAGT...................22551.4024.204.8014.208.20
.............................................................TATCGCAGCCATTTTGACGAGT...................22551.005.8014.0011.6019.60
.............................................................TATCACAGCCATTTTGATGAG....................21550.803.2024.0018.005.60
.............................................................TATCACAGTCATTTTGACGAGT...................22549.404.6011.009.4024.40
.............................................................TATCACGGCCATTTTGACGAGT...................22548.804.2015.209.8019.60
.............................................................TACCACAGCCATTTTGACGAGT...................22548.607.0014.8010.0016.80
.............................................................TATCACAGCCATTTTAACGAGT...................22547.802.4016.2016.8012.40
.............................................................TATCACAGCCATTTTGACAAGT...................22547.006.6010.4012.8017.20
.................................................................ACAGCCATTTTGATGAGTT..................19546.800.0019.009.4018.40
............................................................CTATCACAGCCATTTTGACGAGT...................23546.401.608.809.2026.80
.............................................................TATCACAGCCACTTTGACGAGT...................22545.803.0013.4013.0016.40
.............................................................TATCACAGCCCTTTTGACGCGT...................22375.330.001.6756.0017.67
.............................................................TATCACAGCCATTTCGACGAGT...................22545.004.4016.0010.6014.00
......................GCGTCAAATTGACTGTGAGCTATG........................................................242110.5073.0015.5013.009.00
.............................................................CATCACAGCCATTTTGACGAGT...................22542.404.2015.0010.4012.80
.............................................................TATCACAGCCATTTTGCTGAGTT..................23541.800.0011.8014.0016.00
.............................................................TATCACAGCCATCTTGACGAGT...................22541.404.4013.209.2014.60
.............................................................TATCACAGCCATTTTGACGAGCT..................23540.802.0013.4012.0013.40
.............................................................TATCACAGCCATTTTGAAGAGT...................22538.802.207.4011.0018.20
.............................................................TATCACAGCCATTTTGACGAGTAA.................24362.3310.332.672.6746.67
.............................................................TATAACAGCCATTTTGACGAGT...................22535.804.4012.007.6011.80
.............................................................TGTCACAGCCATTTTGACGAGT...................22533.001.207.0011.0013.80
..............................................................ATCACAGCCATTTTGACGAG....................20532.404.205.406.6016.20
.............................................................TATCACAGCAATTTTGACGAGT...................22529.203.409.605.0011.20
.............................................................TATCACAGCCATTTTGCCGAGTT..................23528.800.6010.6011.606.00
.............................................................TATCACAGCCTTTTTGACGAGT...................22528.000.0010.606.0011.40
.............................................................TATCACAGACATTTTGACGAGTT..................23527.600.804.203.6019.00
.............................................................TATCACAGCCATTTTGATGAGCT..................23527.200.208.005.2013.80
.............................................................TATCACAGCCATTCTGACGAGT...................22527.002.0010.607.806.60
.............................................................TATCATAGCCATTTTGACGAGT...................22526.203.409.603.409.80
..............................................................ATCACAGCCATTTTGACGAGTTA.................23526.003.401.201.4020.00
.............................................................TATCACAGCCATTTTTACGAGTT..................23526.001.803.6016.404.20
.............................................................TATCACAGCCATTTTGATGCGTT..................23526.000.005.4010.6010.00
.............................................................TATCACAGCTATTTTGACGAGT...................22525.603.606.604.8010.60
.............................................................TATCACAGCCAxTTTGACGAGT...................21525.6011.606.005.402.60
.............................................................TCTCACAGCCATTTTGACGAGT...................22525.000.803.4012.408.40
.............................................................TATTACAGCCATTTTGACGAGT...................22524.804.405.205.2010.00
.............................................................TATCACAGCCATTTTGACGCG....................21524.200.402.407.4014.00
.............................................................TATCACAGCCCTTTTGATGAGTT..................23524.200.001.0010.4012.80
.............................................................TATCAAAGCCATTTTGACGAGT...................22524.000.805.403.8014.00
.............................................................TATCACAACCATTTTGACGAGT...................22523.603.806.004.409.40
.............................................................TATCCCAGCCATTTTGACGAGT...................22523.600.407.007.408.80
.............................................................TATCACAGCCATTTTGCCGCGT...................22339.330.0012.3319.677.33
.............................................................TATCACCGCCATTTTGACGAGT...................22522.800.806.2011.404.40
.............................................................TATCACAGCCATTTTGACCAGT...................22522.003.205.207.606.00
.............................................................TATCACACCCATTTTGACGAGT...................22522.006.205.405.604.80
.............................................................TATCACAGCCATTTTGACGTGTT..................23521.800.0010.005.006.80
.............................................................TAGCACAGCCATTTTGACGAGTT..................23521.800.2010.007.204.40
..............................................................ATCACAGCCATTTTGACGAGTTC.................23521.6012.205.003.600.80
.............................................................TATCACAGCCATTTTGATTAGTT..................23520.600.003.0014.003.60
......................GCGTCAAATTGACTGTGAGCTAT.........................................................23251.5036.507.005.003.00
.............................................................TAACACAGCCATTTTGACGAGT...................22519.801.207.204.806.60
.............................................................TATCACAGCCATGTTGACGAGT...................22519.600.409.405.404.40
.............................................................TATCACAGCCATTTTGACTAGTT..................23519.403.003.609.803.00
.............................................................TATCACAGCCCTTTTGACGAG....................21518.800.000.206.4012.20
.............................................................GATCACAGCCATTTTGACGAGT...................22518.601.606.006.404.60
.............................................................TATCACAGCCATTGTGACGAGT...................22518.400.208.405.004.80
.............................................................TATCACAGCCATTTTGACGATTT..................23518.403.603.809.401.60
.............................................................TATCACAGCCATTTTGACGACT...................22518.402.407.003.205.80
.............................................................TATCACAGCCATTTTGACGAAT...................22518.001.603.605.807.00
.............................................................TATCACAGACATTTTGATGAGTT..................23517.600.002.201.6013.80
.............................................................TATCACAGCCATTTTGACGAGGT..................23517.600.401.804.4011.00
.............................................................AATCACAGCCATTTTGACGAGT...................22517.400.605.403.607.80
9 scaffold_6500:3942578-3942637 + 23.88
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCTCATTCAATTCTGTATTTCGGCACCAAAAA-----------------------------CCGACATGGATCACAATGTGATTGTTAG-----------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo


droGri2 - 4 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_15203:306998-307104 + 68.48
TC-----TACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGG----ATTTG-ACTTCATATCACAGCCATTTTGACGAGTTTGTTG-GACAGCCAGCCT
TCGTTGCTATCAGTGCTCCATATTGGCGCGTCAAATTGACTGTGAGCTATGTTGTTGCAGTTGTAATTCATATCACAGCCATTTTGACGAGTTTGATGTGGCAGCCA----
SizeHit CountTotal NormV109
Male body
......................................................................TATCACAGCCATTTTGACGAGTT..................237987.00987.00
......................................................................TATCACAGCCATTTTGACGAGT...................227407.29407.29
......................................................................TATCACAGCCATTTTGACGAGTTT.................247155.43155.43
......................................................................TATCACAGCCATTTTGATGAGTT..................23723.1423.14
......................................................................TATCACAGCCATTTTGACGAGTTA.................24710.8610.86
......................................................................TATCACAGCCATTTTGAAGAGTT..................2379.299.29
......................................................................TATCACAGCCATTTTGACGAGTC..................2378.008.00
......................................................................TATCACAGCCATTTTGACGAG....................2177.297.29
......................................................................TATCACAGCCATTTTGAGGAGTT..................2376.436.43
...........................GCGTCAAATTGACTGTGAGCTATG............................................................24222.5022.50
......................................................................TATCACAGCCATTTTGATGAGT...................2275.145.14
......................................................................TATCACAGCCATTTTGACGAGTG..................2375.005.00
......................................................................TATCACAGCCATTTTGAAGAGT...................2274.864.86
......................................................................TATCACAGCCATTTTGACGAGTA..................2373.863.86
......................................................................TATCACAGACATTTTGACGAGTT..................2373.573.57
......................................................................TACCACAGCCATTTTGACGAGTT..................2373.433.43
......................................................................TATCAAAGCCATTTTGACGAGTT..................2373.293.29
......................................................................TATCACCGCCATTTTGACGAGTT..................2373.003.00
......................................................................TATCACAGCCATTTTGAAGAGTTT.................2472.292.29
......................................................................TATCACGGCCATTTTGACGAGTT..................2372.292.29
......................................................................TATCACAGCCATTTTGAGGAGT...................2272.142.14
......................................................................TAACACAGCCATTTTGACGAGTT..................2372.142.14
......................................................................TATCAGAGCCATTTTGACGAGTT..................2372.002.00
......................................................................TATCACAGTCATTTTGACGAGTT..................2372.002.00
......................................................................TATCACCGCCATTTTGACGAGT...................2272.002.00
......................................................................TATCACAGCCATTTTGACGATTT..................2371.861.86
......................................................................TATCACTGCCATTTTGACGAGTT..................2371.711.71
......................................................................TATCACAGCCATTTTGACGCGTT..................2371.711.71
......................................................................TATCACAGCCATTTTGCCGAGTT..................2371.571.57
......................................................................TATCAAAGCCATTTTGACGAGT...................2271.571.57
......................................................................TATCACAGCCCTTTTGACGAGTT..................2371.571.57
......................................................................TATCATAGCCATTTTGACGAGTT..................2371.571.57
......................................................................TATCACATCCATTTTGACGAGTT..................2371.571.57
......................................................................TATCACAGCCATTTTGACGAGCT..................2371.431.43
......................................................................TACCACAGCCATTTTGACGAGT...................2271.291.29
......................................................................TATCACAGCCATTTTGACGAGTGT.................2471.291.29
......................................................................TATCACAGCCATTTTGACGAGTTAA................2551.801.80
......................................................................TATCACAGCCATTTTGATGAGTTT.................2471.141.14
......................................................................TAGCACAGCCATTTTGACGAGTT..................2371.141.14
......................................................................TATCACAGGCATTTTGACGAGTT..................2371.141.14
......................................................................TATCACAGCCATTTTGACGAGTCT.................2471.141.14
......................................................................TATCACACCCATTTTGACGAGTT..................2371.141.14
......................................................................TATCACAGCCATTTTGACGAGTAT.................2471.141.14
..........................................................................ACAGCCATTTTGACGAGTT..................1971.001.00
......................................................................TATCACAGCCATTTTGACGAGTTTT................2571.001.00
......................................................................TATCACAGCCATTTTGACCAGTT..................2371.001.00
......................................................................TATCACAGCCATTTTGAGGAGTTT.................2471.001.00
......................................................................TATCACAGCCATTTCGACGAGTT..................2371.001.00
......................................................................TATCACAGCAATTTTGACGAGTT..................2370.860.86
......................................................................TATCACAGCCATTTTGACAAGTT..................2370.860.86
......................................................................TATCACGGCCATTTTGACGAGT...................2270.860.86
......................................................................TATCACAGCCATTTTAACGAGTT..................2370.860.86
......................................................................TAGCACAGCCATTTTGACGAGT...................2270.860.86
......................................................................TATCACAGCCACTTTGACGAGTT..................2370.860.86
......................................................................TATCACAGCCATCTTGACGAGTT..................2370.860.86
......................................................................TATCACAGTCATTTTGACGAGT...................2270.710.71
......................................................................TATCACAGCCATTTTGACGCGT...................2270.710.71
......................................................................TCTCACAGCCATTTTGACGAGTT..................2370.710.71
......................................................................TATCACAGACATTTTGACGAGT...................2270.710.71
......................................................................CATCACAGCCATTTTGACGAGTT..................2370.710.71
......................................................................TATCACAGCCATTTTGACTAGT...................2270.710.71
......................................................................TATCACAGCCATTTTCACGAGTT..................2370.710.71
......................................................................TATCAGAGCCATTTTGACGAGTTT.................2470.710.71
......................................................................TATCACAGCCATTTTGGCGAGTT..................2370.570.57
......................................................................TATCACAGCCATTTTGACGACTT..................2370.570.57
......................................................................TATCACAGTCATTTTGACGAGTTT.................2470.570.57
......................................................................TATCACAGCCATTTTTACGAGTT..................2370.570.57
......................................................................TATCCCAGCCATTTTGACGAGT...................2270.570.57
......................................................................TATAACAGCCATTTTGACGAGTT..................2370.570.57
......................................................................TATTACAGCCATTTTGACGAGTT..................2370.570.57
......................................................................TATCACACCCATTTTGACGAGT...................2270.570.57
.....................................................................CTATCACAGCCATTTTGACGAGTT..................2470.570.57
...................................................TTGTTGCAGTTGTAATTCA.........................................1922.002.00
......................................................................TATCACAGCCATTTTGACGCGTTT.................2470.570.57
......................................................................TATCATAGCCATTTTGACGAGT...................2270.570.57
......................................................................TATCACAGCCATTTTGACGGGTT..................2370.570.57
......................................................................TATCACCGCCATTTTGACGAGTTT.................2470.570.57
......................................................................TATAACAGCCATTTTGACGAGT...................2270.570.57
......................................................................TATCAGAGCCATTTTGACGAGT...................2270.570.57
......................................................................TATCACAGCCATTCTGACGAGTT..................2370.570.57
......................................................................TATCGCAGCCATTTTGACGAGTT..................2370.570.57
......................................................................TATCACAACCATTTTGACGAGTT..................2370.570.57
......................................................................TCTCACAGCCATTTTGACGAGT...................2270.430.43
..........................................................................ACAGCCATTTTGACGAGT...................1880.380.38
......................................................................TATCACAGCCATTTTGACGAGAT..................2370.430.43
......................................................................TATCACAGCCATTTTGACGAGC...................2280.380.38
......................................................................TATCACAGCCATTTTGACGATT...................2270.430.43
......................................................................TATCACAGCCACTTTGACGAGT...................2270.430.43
......................................................................TATCATAGCCATTTTGACGAGTTT.................2470.430.43
......................................................................TAACACAGCCATTTTGACGAGT...................2270.430.43
.....................................................................CTATCACAGCCATTTTGACGAGT...................2370.430.43
........................................................................TATCAGCCATTTTGACGAGTT..................2150.600.60
......................................................................TATCACAGCCATTTTGGCGAGT...................2270.430.43
......................................................................TATCACAGCCATTTTGACGAGTTG.................2470.430.43
......................................................................TATCACAGCCATTTTGACGACT...................2270.430.43
......................................................................TATCACAGCCATTTTGCCGAGT...................2270.430.43
......................................................................TACCACAGCCATTTTGACGAGTTT.................2470.430.43
......................................................................TATCACAGCCATTTTGACGAGA...................2270.430.43
......................................................................TATCACTGCCATTTTGACGAGTTT.................2470.430.43
......................................................................TATCACAGCCATTTTGGCGAGTTT.................2470.430.43
......................................................................TATCACAGCCAxTTTGACGAGTT..................2270.430.43
5 scaffold_14906:4357492-4357588 - 65.33
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TTTCTTTCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCT-TATGTATTTTATATCATATCACAGCCATTTTGACGAGTTTG--GGTAAAGAAATGT
SizeHit CountTotal NormV109
Male body
............................................................TATCACAGCCATTTTGACGAGTT.................237987.00987.00
............................................................TATCACAGCCATTTTGACGAGT..................227407.29407.29
............................................................TATCACAGCCATTTTGACGAGTTT................247155.43155.43
............................................................TATCACAGCCATTTTGATGAGTT.................23723.1423.14
............................................................TATCACAGCCATTTTGACGAGTTA................24710.8610.86
............................................................TATCACAGCCATTTTGAAGAGTT.................2379.299.29
............................................................TATCACAGCCATTTTGACGAGTC.................2378.008.00
............................................................TATCACAGCCATTTTGACGAG...................2177.297.29
............................................................TATCACAGCCATTTTGAGGAGTT.................2376.436.43
............................................................TATCACAGCCATTTTGATGAGT..................2275.145.14
............................................................TATCACAGCCATTTTGACGAGTG.................2375.005.00
............................................................TATCACAGCCATTTTGAAGAGT..................2274.864.86
............................................................TATCACAGCCATTTTGACGAGTA.................2373.863.86
............................................................TATCACAGACATTTTGACGAGTT.................2373.573.57
............................................................TACCACAGCCATTTTGACGAGTT.................2373.433.43
............................................................TATCAAAGCCATTTTGACGAGTT.................2373.293.29
............................................................TATCACCGCCATTTTGACGAGTT.................2373.003.00
............................................................TATCACGGCCATTTTGACGAGTT.................2372.292.29
............................................................TATCACAGCCATTTTGAAGAGTTT................2472.292.29
............................................................TAACACAGCCATTTTGACGAGTT.................2372.142.14
............................................................TATCACAGCCATTTTGAGGAGT..................2272.142.14
............................................................TATCACCGCCATTTTGACGAGT..................2272.002.00
............................................................TATCACAGTCATTTTGACGAGTT.................2372.002.00
............................................................TATCAGAGCCATTTTGACGAGTT.................2372.002.00
............................................................TATCACAGCCATTTTGACGATTT.................2371.861.86
............................................................TATCACTGCCATTTTGACGAGTT.................2371.711.71
............................................................TATCACAGCCATTTTGACGCGTT.................2371.711.71
............................................................TATCACATCCATTTTGACGAGTT.................2371.571.57
............................................................TATCAAAGCCATTTTGACGAGT..................2271.571.57
............................................................TATCATAGCCATTTTGACGAGTT.................2371.571.57
............................................................TATCACAGCCATTTTGCCGAGTT.................2371.571.57
............................................................TATCACAGCCCTTTTGACGAGTT.................2371.571.57
............................................................TATCACAGCCATTTTGACGAGCT.................2371.431.43
............................................................TATCACAGCCATTTTGACGAGTTAA--.............2551.801.80
............................................................TATCACAGCCATTTTGACGAGTGT................2471.291.29
............................................................TACCACAGCCATTTTGACGAGT..................2271.291.29
............................................................TATCACAGGCATTTTGACGAGTT.................2371.141.14
............................................................TATCACACCCATTTTGACGAGTT.................2371.141.14
............................................................TATCACAGCCATTTTGACGAGTAT................2471.141.14
............................................................TATCACAGCCATTTTGATGAGTTT................2471.141.14
............................................................TATCACAGCCATTTTGACGAGTCT................2471.141.14
............................................................TAGCACAGCCATTTTGACGAGTT.................2371.141.14
............................................................TATCACAGCCATTTCGACGAGTT.................2371.001.00
................................................................ACAGCCATTTTGACGAGTT.................1971.001.00
............................................................TATCACAGCCATTTTGACCAGTT.................2371.001.00
............................................................TATCACAGCCATTTTGAGGAGTTT................2471.001.00
............................................................TATCACAGCCATTTTGACGAGTTTT--.............2571.001.00
............................................................TATCACGGCCATTTTGACGAGT..................2270.860.86
............................................................TATCACAGCCACTTTGACGAGTT.................2370.860.86
............................................................TATCACAGCCATTTTGACAAGTT.................2370.860.86
............................................................TATCACAGCAATTTTGACGAGTT.................2370.860.86
............................................................TAGCACAGCCATTTTGACGAGT..................2270.860.86
............................................................TATCACAGCCATTTTAACGAGTT.................2370.860.86
............................................................TATCACAGCCATCTTGACGAGTT.................2370.860.86
............................................................TATCAGAGCCATTTTGACGAGTTT................2470.710.71
............................................................CATCACAGCCATTTTGACGAGTT.................2370.710.71
............................................................TATCACAGACATTTTGACGAGT..................2270.710.71
............................................................TATCACAGTCATTTTGACGAGT..................2270.710.71
............................................................TCTCACAGCCATTTTGACGAGTT.................2370.710.71
............................................................TATCACAGCCATTTTGACGCGT..................2270.710.71
............................................................TATCACAGCCATTTTGACTAGT..................2270.710.71
............................................................TATCACAGCCATTTTCACGAGTT.................2370.710.71
............................................................TATCACAGCCATTTTGACGGGTT.................2370.570.57
............................................................TATAACAGCCATTTTGACGAGT..................2270.570.57
............................................................TATCACAGCCATTCTGACGAGTT.................2370.570.57
............................................................TATCACCGCCATTTTGACGAGTTT................2470.570.57
............................................................TATCACAGCCATTTTGGCGAGTT.................2370.570.57
............................................................TATCACACCCATTTTGACGAGT..................2270.570.57
............................................................TATAACAGCCATTTTGACGAGTT.................2370.570.57
............................................................TATCACAGTCATTTTGACGAGTTT................2470.570.57
............................................................TATCAGAGCCATTTTGACGAGT..................2270.570.57
............................................................TATCACAACCATTTTGACGAGTT.................2370.570.57
............................................................TATCGCAGCCATTTTGACGAGTT.................2370.570.57
............................................................TATTACAGCCATTTTGACGAGTT.................2370.570.57
............................................................TATCACAGCCATTTTGACGACTT.................2370.570.57
............................................................TATCACAGCCATTTTTACGAGTT.................2370.570.57
............................................................TATCCCAGCCATTTTGACGAGT..................2270.570.57
............................................................TATCATAGCCATTTTGACGAGT..................2270.570.57
...........................................................CTATCACAGCCATTTTGACGAGTT.................2470.570.57
............................................................TATCACAGCCATTTTGACGCGTTT................2470.570.57
............................................................TAACACAGCCATTTTGACGAGT..................2270.430.43
...........................................................CTATCACAGCCATTTTGACGAGT..................2370.430.43
............................................................TATCACTGCCATTTTGACGAGTTT................2470.430.43
............................................................TATCACAGCCATTTTGGCGAGTTT................2470.430.43
............................................................TATCACAGCCATTTTGACGAGTTG................2470.430.43
................................................................ACAGCCATTTTGACGAGT..................1880.380.38
............................................................TATCACAGCCATTTTGACGAGA..................2270.430.43
............................................................TATCACAGCCATTTTGACGAGC..................2280.380.38
............................................................TATCACAGCCAxTTTGACGAGTT.................2270.430.43
............................................................TATCACAGCCACTTTGACGAGT..................2270.430.43
............................................................TCTCACAGCCATTTTGACGAGT..................2270.430.43
............................................................TAACACAGCCATTTTGACGAGTTT................2470.430.43
............................................................TATCACAGCCATTTTGACGAGAT.................2370.430.43
............................................................TATCAAAGCCATTTTGACGAGTTA................2450.600.60
............................................................TATCACAGCCATTTTGACGACT..................2270.430.43
..............................................................TATCAGCCATTTTGACGAGTT.................2150.600.60
.............................................................ATCACAGCCATTTTGACGAGTT.................2270.430.43
............................................................TATCACAGCCATTTTGACGATT..................2270.430.43
............................................................TATCACAGCCATTTTGCCGAGT..................2270.430.43
............................................................TATCATAGCCATTTTGACGAGTTT................2470.430.43
............................................................TATCACAGCCATTTTGGCGAGT..................2270.430.43
3 scaffold_15252:15253259-15253326 + 34.69
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
TCTGATTCAGTTTTGTATCTCGGCACCGAAA--------ACCGATATGGATCACAATGTGATTGTCAGCGATTATG------------------------
SizeHit CountTotal NormV109
Male body
11 scaffold_15074:3153986-3154042 - 18.61
TCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCT
GATGCCCAAGAAGATAGTCAACGCCA-AGATTGCCTG------------CCTTGACTTTTCGCTGCAGAA------------------------------
SizeHit CountTotal NormV109
Male body


Generated: 04/20/2012 at 05:27:43 EDT