dme-mir-1000- 12- and 20-way alignments

dme-mir-1000	chr3R:21414581-21414680 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	antisense_to_intron

Legend:

   mature strand at position 21414646-21414666
   star strand at position 21414600-21414621
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chr3R:21414566-21414695 -	TATAC--CAT-------------GAAATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTA--TAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GCGGCG----------------------------------GACAG-----------------------
droSim1	chr3R:21243636-21243765 -	TATAC--CGT-------------GAAATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTTACACTATATTA--TAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GCGGCG----------------------------------GACAG-----------------------
droSec1	super_13:202504-202633 -	TATAC--CAT-------------GAAATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTA--TAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GCGGCG----------------------------------GACAG-----------------------
droYak2	chr3R:25064546-25064667 +	G-----------------------AATTG-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTA--TAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GAGGCG----------------------------------GCCAG-----------------------
droEre2	scaffold_4820:6627814-6627943 +	TATAC--CAT-------------GAAATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTA--TAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GCGGCG----------------------------------GTCAG-----------------------
droAna3	scaffold_13340:3670416-3670527 -	TA------------------------------------------GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GGA-----------------------------------------G-----------------------
dp4	chr2:21158126-21158302 -	TATCG--AATTA-CATACGGCGTCGGATCGGAGCAGATGAGAG-GGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAATTA--TAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAA--------AGAGAAGGAG---------------------------------AAGCTACAAAGCTACAAAGCTACGG
droPer1	super_3:3932632-3932791 -	TATCG--AATTA-CATACGGCGTCGGATCGGAGCAGATGAGAG-GGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAATTA--TAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAA--------AGAGCTA--------------------------------------------------CAAAGCTACGG
droWil1	scaffold_181130:14638703-14638858 +	TAACA--AA--------------------------------AG-AGAGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATAGTAAC--ATATTCA--TTTCGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCTGTGGCAACGA--------GCGGAAAACTCTACTTCTGATGATGATAATAATGATTCAAGTCAA-----------------------
droVir3	scaffold_12855:6810239-6810391 -	TGTGTCTGATTGTGATATATCGTCG-ATC-------------GTTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTACG--TTAAGCA--ATTGGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCAA-------AAAGCCAGAA---------------------------------AAGCCACAAA---------------
droMoj3	scaffold_6540:25791531-25791664 +	TCAAT-----------------------CAACGCGTCTATTAT-AGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTAAA--TTAAGCA--ATTGGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCA--------GAAGAAATCT---------------------------------AA-----------------------
droGri2	scaffold_14906:2964685-2964824 -	TtTtT--TTt----------------tTC-------------GTTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTTAA--TTAAGCA--ATTGGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTTGCTAGCAACTAAAAAGCGAGCAGCG----------------------------------AGCAG-CGAGA--------A--------

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chr3R:21414566-21414695 -	NA	TATACC-ATG----A------------AATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGAC-------------------------------------------------------------------A-------------------G-
droSim1	chr3R:21243636-21243765 -	1	TATACC-GTG----A------------AATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTTACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGAC-------------------------------------------------------------------A-------------------G-
droSec1	super_13:202504-202633 -	1	TATACC-ATG----A------------AATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGAC-------------------------------------------------------------------A-------------------G-
droYak2	chr3R:25064545-25064667 +	1	---------G----A------------ATTG-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------AGGCGGCC-------------------------------------------------------------------A-------------------G-
droEre2	scaffold_4820:6627814-6627943 +	1	TATACC-ATG----A------------AATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGTC-------------------------------------------------------------------A-------------------G-
droEug1	scf7180000409798:1136852-1136983 +	2	TATGCC-ACA----A------------AATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAATACTATATCTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------TGGCGGCA-------------------------------------------------------------------A-------------------G-
droBia1	scf7180000302136:2260816-2260952 -	1	TACATCCATC----G------------AATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAC--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGA-GGCG-GCGGCGGCA-------------------------------------------------------------------A-------------------G-
droTak1	scf7180000415257:294611-294745 -	1	TGTAC--ACA----A------------AATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGA-GGCG-GCGGCGGCA-------------------------------------------------------------------A-------------------G-
droEle1	scf7180000491280:3122819-3122940 -	1	TACACT-ACG----A------------AATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG---------------------------------------------------------------------------------------------------------
droRho1	scf7180000779501:511380-511509 +	1	TATGTC-ACG----A------------AATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------AGGCGGCC-------------------------------------------------------------------A-------------------G-
droFic1	scf7180000454055:1331162-1331296 -	2	TATTCC-ATG----G------------AATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGAAA-ACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGACA-GGCG-GCGGCGGCA-------------------------------------------------------------------A-------------------G-
droKik1	scf7180000302639:1623489-1623623 +	1	TATATC-GCGC---A------------AATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CAGCGGAA----------------------------AACTCC-------------------------------------------------------
droAna3	scaffold_13340:3670416-3670527 -	1	TA--------------------------------------------GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGG----------------------------------------------------------------------------------A-------------------G-
droBip1	scf7180000396712:682201-682324 +	1	TATACC-GTC----A------------TAT--------------A-GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGG----------------------------------------------------------------------------------A-------------------G-
dp4	chr2:21158113-21158302 -	4	TATC-----GAATTACATACGGCGTCGGATCGGAGCAGATGAGAG-GGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAAT--TATAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAAAG--------AGAAGGAGAAGCTACAAAGCTACAAAGCTACGGAAAAATGCTAC------------------------------A-------------------G-
droPer1	super_3:3932619-3932791 -	5	TATC-----GAATTACATACGGCGTCGGATCGGAGCAGATGAGAG-GGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAAT--TATAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAAAG--------AGCTACA-----------------AAGCTACGGAAAAATGCTAC------------------------------A-------------------G-
droWil1	scaffold_181130:14638697-14638859 +	3	TCCATC-TAA----C------------AAAA-------------G-AGAGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATAGTAACA-TAT-T--CATTTCGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCTGTGGCAACGAG--------CGGAAAAC-------------------------------TCT-ACTTCTGATGATGATAATAATGATTCAAGTCAA-------------------A-
droVir3	scaffold_12855:6810247-6810376 -	1	TATATC-GTC----G-------------ATC-------------GTTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTA-CGTTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCAAA-A-----AGCCAGAA-------------------------------------------------------------------A-------------------A-
droMoj3	scaffold_6540:25791543-25791693 +	2	TCTATT-AT-------------------------------------AGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTAAA-TTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCAGA--------AGAAATC-------------------------------TA-------------------------ATCGAGTCGACTATGCGGCATACACAGAGG-
droGri2	scaffold_14906:2964690-2964824 -	9	TATATT--------T------------AATC-------------GTTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTTAA-TTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTTGCTAGCAACTAAAAAGCGAGCAGCGAGC-------------------------------------------------------------------A-------------------GC

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

TATAC--CAT-------------GAAATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTA--TAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GCGGCG----------------------------------GACAG-----------------------

Size

Hit Count

Total Norm

droSim1

TATAC--CGT-------------GAAATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTTACACTATATTA--TAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GCGGCG----------------------------------GACAG-----------------------	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
..........................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	18445.00	20.00	17787.00	335.00	303.00
..........................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	8976.00	4519.00	2880.00	59.00	1518.00
..........................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	6141.00	1421.00	4390.00	106.00	224.00
..........................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................	19	1	503.00	0.00	495.00	6.00	2.00
..........................................................ATATTGTCCTGTCACAGC......................................................................................................................................................	18	1	487.00	1.00	471.00	9.00	6.00
..........................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................	21	1	487.00	0.00	458.00	10.00	19.00
..........................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................	21	1	444.00	5.00	388.00	16.00	35.00
..........................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................	20	1	359.00	0.00	352.00	2.00	5.00
.........................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................	22	1	173.00	82.00	17.00	0.00	74.00
..........................................................ATATTGTCCTGTCACAGCGG....................................................................................................................................................	20	1	93.00	0.00	84.00	6.00	3.00
.........................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................	21	1	93.00	18.00	13.00	1.00	61.00
..........................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................	22	1	88.00	15.00	69.00	2.00	2.00
..........................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................	23	1	73.00	54.00	19.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCCGTA..................................................................................................................................................	22	1	35.00	35.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGGA..................................................................................................................................................	22	1	31.00	20.00	4.00	0.00	7.00
..........................................................ATATTGCCCTGTCACAGCAG....................................................................................................................................................	20	1	28.00	0.00	27.00	0.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................	22	1	28.00	6.00	19.00	0.00	3.00
..........................................................ATATTGTCCTGCCACAGCAG....................................................................................................................................................	20	1	28.00	0.00	27.00	0.00	1.00
..........................................................ATATTTTCCTGTCACAGCAG....................................................................................................................................................	20	1	24.00	0.00	22.00	1.00	1.00
..........................................................ATATTGTCCTTTCACAGCAGTA..................................................................................................................................................	22	1	22.00	3.00	9.00	0.00	10.00
..........................................................ATATTGTCCTGTCACGGCAG....................................................................................................................................................	20	1	22.00	0.00	22.00	0.00	0.00
..........................................................ATATTGTCCCGTCACAGCAG....................................................................................................................................................	20	1	21.00	0.00	21.00	0.00	0.00
..........................................................ATATTGTCCTTTCACAGCAG....................................................................................................................................................	20	1	21.00	0.00	18.00	0.00	3.00
..........................................................ATATTGTCCTGTCACAGCCGT...................................................................................................................................................	21	1	20.00	20.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................	19	1	19.00	0.00	19.00	0.00	0.00
..........................................................ATATTGTCCTGTCACCGCAGTA..................................................................................................................................................	22	1	19.00	18.00	1.00	0.00	0.00
..........................................................ATATTGTCATGTCACAGCAGTA..................................................................................................................................................	22	1	19.00	18.00	1.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................	22	1	19.00	9.00	9.00	1.00	0.00
.........................................................................................................CTGCTGGGTCGGGGCATT.......................................................................................................	18	1	18.00	0.00	12.00	2.00	4.00
...........................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................	19	1	18.00	0.00	17.00	1.00	0.00
..........................................................ATATTGGCCTGTCACAGCAGTA..................................................................................................................................................	22	1	17.00	16.00	1.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................	23	1	17.00	2.00	13.00	2.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................	21	1	16.00	2.00	13.00	1.00	0.00
..........................................................ATATTGTCCTGGCACAGCAG....................................................................................................................................................	20	1	16.00	0.00	16.00	0.00	0.00
..........................................................ATATTGGCCTGTCACAGCAGT...................................................................................................................................................	21	1	16.00	11.00	5.00	0.00	0.00
..........................................................ATATTGTCCxxTCACAGCAG....................................................................................................................................................	18	1	16.00	0.00	16.00	0.00	0.00
..........................................................ATATTGTCCTGTCGCAGCAG....................................................................................................................................................	20	1	16.00	0.00	16.00	0.00	0.00
..........................................................ATATTGTACTGTCACAGCAGTA..................................................................................................................................................	22	1	14.00	14.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCG.....................................................................................................................................................	19	1	13.00	0.00	13.00	0.00	0.00
..........................................................ATATTGTCCxxTCACAGCAGT...................................................................................................................................................	19	1	13.00	0.00	13.00	0.00	0.00
..........................................................ATATTCTCCTGTCACAGCAG....................................................................................................................................................	20	1	12.00	0.00	11.00	0.00	1.00
..........................................................ATATTGTCCTGTCGCAGCAGTA..................................................................................................................................................	22	1	12.00	6.00	4.00	0.00	2.00
..........................................................ATATTGTCCxxTCACAGCAGTA..................................................................................................................................................	20	1	12.00	0.00	8.00	0.00	4.00
..........................................................ATATTGTCCTGCCACAGCAGTA..................................................................................................................................................	22	1	12.00	4.00	4.00	0.00	4.00
..........................................................ATATTGTCCTTTCACAGCAGT...................................................................................................................................................	21	1	12.00	0.00	12.00	0.00	0.00
..........................................................ATATTGTCCTGGCACAGCAGTA..................................................................................................................................................	22	1	12.00	8.00	4.00	0.00	0.00
..........................................................ATATTGTCCTGTCACATCAG....................................................................................................................................................	20	1	11.00	0.00	11.00	0.00	0.00
..........................................................ATATTGTCCCGTCACAGCAGTA..................................................................................................................................................	22	1	11.00	5.00	6.00	0.00	0.00
..........................................................ATATTGCCCTGTCACAGCAGTA..................................................................................................................................................	22	1	11.00	6.00	1.00	0.00	4.00
...............................................................................................................................TTGTTGAGCGTCATTAGCAAC..............................................................................	21	1	11.00	0.00	8.00	0.00	3.00
...............................................................................................................................TTGTTGAGCGTCATTAGC.................................................................................	18	1	11.00	0.00	8.00	0.00	3.00
..........................................................ATATTGTCCTGTCACGGCAGTA..................................................................................................................................................	22	1	11.00	7.00	2.00	0.00	2.00
..........................................................ATATTGGCCTGTCACAGCAG....................................................................................................................................................	20	1	11.00	0.00	11.00	0.00	0.00
..........................................................ATATCGTCCTGTCACAGCAG....................................................................................................................................................	20	1	10.00	0.00	10.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGCA..................................................................................................................................................	22	1	10.00	7.00	2.00	0.00	1.00
..........................................................ATATTGTCCTGTCATAGCAGTA..................................................................................................................................................	22	1	10.00	8.00	1.00	0.00	1.00
..........................................................ATATTGCCCTGTCACAGCAGT...................................................................................................................................................	21	1	10.00	1.00	8.00	0.00	1.00
...........................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................	21	1	9.00	4.00	3.00	0.00	2.00
..........................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................	20	1	9.00	0.00	8.00	0.00	1.00
..........................................................ATATTGTCTTGTCACAGCAG....................................................................................................................................................	20	1	9.00	0.00	9.00	0.00	0.00
..........................................................GTATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	9.00	0.00	9.00	0.00	0.00
..........................................................ATATTGTCCCGTCACAGCAGT...................................................................................................................................................	21	1	9.00	2.00	7.00	0.00	0.00
..........................................................ATATTGTCCTxTCACAGCAGTA..................................................................................................................................................	21	1	9.00	0.00	6.00	0.00	3.00
..........................................................ATATTGTCCTGTTACAGCAG....................................................................................................................................................	20	1	8.00	0.00	8.00	0.00	0.00
..........................................................ATATTGTCCTGTTACAGCAGTA..................................................................................................................................................	22	1	8.00	7.00	0.00	0.00	1.00
..........................................................ATATTATCCTGTCACAGCAG....................................................................................................................................................	20	1	8.00	0.00	8.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCGGT...................................................................................................................................................	21	1	8.00	5.00	3.00	0.00	0.00
..........................................................ATATTGTCCTGTCACATCAGTA..................................................................................................................................................	22	1	8.00	6.00	2.00	0.00	0.00
..........................................................ATATTGTCCTCTCACAGCAGTA..................................................................................................................................................	22	1	8.00	4.00	1.00	0.00	3.00
..........................................................ATATTGTCCTGTCACAGCTT....................................................................................................................................................	20	1	8.00	0.00	8.00	0.00	0.00
..........................................................ATATTGTCCTGGCACAGCAGT...................................................................................................................................................	21	1	8.00	5.00	2.00	0.00	1.00
..........................................................ATATTGTCCTGTCGCAGCAGT...................................................................................................................................................	21	1	8.00	4.00	4.00	0.00	0.00
..........................................................ATATTGTCCTATCACAGCAG....................................................................................................................................................	20	1	8.00	0.00	8.00	0.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGT...................................................................................................................................................	21	1	8.00	3.00	4.00	0.00	1.00
..........................................................ATATTGTCCTGTCCCAGCAGTA..................................................................................................................................................	22	1	7.00	7.00	0.00	0.00	0.00
..........................................................ATATTGTTCTGTCACAGCAGTA..................................................................................................................................................	22	1	7.00	5.00	2.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGTAGTA..................................................................................................................................................	22	1	7.00	5.00	2.00	0.00	0.00
............................................................ATTGTCCTGTCACAGCAG....................................................................................................................................................	18	1	7.00	0.00	7.00	0.00	0.00
..........................................................GTATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	7.00	4.00	1.00	0.00	2.00
..........................................................ACATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	7.00	0.00	7.00	0.00	0.00
..........................................................ATAGTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	7.00	6.00	1.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCATTA..................................................................................................................................................	22	1	7.00	7.00	0.00	0.00	0.00
..........................................................ATATTGTCCTCTCACAGCAG....................................................................................................................................................	20	1	7.00	0.00	7.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCTGTA..................................................................................................................................................	22	1	7.00	7.00	0.00	0.00	0.00
..........................................................ATATTGTCCTxTCACAGCAGT...................................................................................................................................................	20	1	7.00	0.00	5.00	1.00	1.00
..........................................................ATATTGTCCTGTCATAGCAG....................................................................................................................................................	20	1	6.00	0.00	6.00	0.00	0.00
..........................................................ATATTGTCCTGTCACACCAG....................................................................................................................................................	20	1	6.00	0.00	6.00	0.00	0.00
..........................................................ATATTGTCATGTCACAGCAGT...................................................................................................................................................	21	1	6.00	5.00	1.00	0.00	0.00
.........................................................................................................CTGCTGGGTCGGGGCATTAA.....................................................................................................	20	1	6.00	0.00	0.00	1.00	5.00
..........................................................ATATTGTCCTGACACAGCAGTA..................................................................................................................................................	22	1	6.00	0.00	2.00	0.00	4.00
..........................................................ATATTGTCCTGTCACGGCAGT...................................................................................................................................................	21	1	6.00	0.00	6.00	0.00	0.00
..........................................................ATATTGTCCTGACACAGCAG....................................................................................................................................................	20	1	6.00	0.00	4.00	2.00	0.00
..........................................................ATATTGGACTGTCACAGCAGTA..................................................................................................................................................	22	1	5.00	5.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTAACAGCAGTA..................................................................................................................................................	22	1	5.00	4.00	1.00	0.00	0.00
..........................................................ATGTTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	5.00	4.00	0.00	0.00	1.00
..........................................................ATATTGTCCTGTCACCGCAGT...................................................................................................................................................	21	1	5.00	5.00	0.00	0.00	0.00
..........................................................TTATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	5.00	0.00	5.00	0.00	0.00
..........................................................TTATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	5.00	5.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCAAAGCAG....................................................................................................................................................	20	1	5.00	0.00	5.00	0.00	0.00
..........................................................ATATTGTCCTATCACAGCAGTA..................................................................................................................................................	22	1	5.00	5.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCATAGCAGT...................................................................................................................................................	21	1	5.00	2.00	3.00	0.00	0.00

droSec1

TATAC--CAT-------------GAAATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTA--TAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GCGGCG----------------------------------GACAG-----------------------	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
..........................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	44506.00	4696.00	6045.00	33765.00
..........................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	9644.00	136.00	5906.00	3602.00
..........................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	5628.00	204.00	75.00	5349.00
..........................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................	19	1	3149.00	0.00	19.00	3130.00
..........................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................	22	1	1875.00	77.00	19.00	1779.00
..........................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................	23	1	449.00	15.00	97.00	337.00
..........................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................	21	1	397.00	12.00	1.00	384.00
...........................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................	20	1	316.00	29.00	34.00	253.00
.........................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................	22	1	179.00	6.00	159.00	14.00
...........................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................	21	1	169.00	8.00	50.00	111.00
..........................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................	21	1	83.00	5.00	8.00	70.00
..........................................................ACATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	72.00	7.00	21.00	44.00
..........................................................ATATTGTCCTGTCACAGCCGT...................................................................................................................................................	21	1	72.00	43.00	3.00	26.00
..........................................................ATATTGTCCTGTCACAGCGGT...................................................................................................................................................	21	1	71.00	28.00	15.00	28.00
..........................................................ATATTGTCCCGTCACAGCAGT...................................................................................................................................................	21	1	63.00	5.00	16.00	42.00
..........................................................ATATTGTCCTGTCACGGCAGT...................................................................................................................................................	21	1	55.00	5.00	12.00	38.00
............................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................	19	1	52.00	1.00	24.00	27.00
..........................................................ATATTGACCTGTCACAGCAGT...................................................................................................................................................	21	1	51.00	1.00	1.00	49.00
..........................................................ATATTTTCCTGTCACAGCAGT...................................................................................................................................................	21	1	51.00	4.00	10.00	37.00
..........................................................ATATTGTCCTGCCACAGCAGT...................................................................................................................................................	21	1	51.00	5.00	7.00	39.00
..........................................................ATATTGCCCTGTCACAGCAGT...................................................................................................................................................	21	1	51.00	10.00	8.00	33.00
..........................................................ATATTGTTCTGTCACAGCAGTA..................................................................................................................................................	22	1	50.00	0.00	48.00	2.00
..........................................................ATATTGTACTGTCACAGCAGT...................................................................................................................................................	21	1	50.00	2.00	0.00	48.00
.........................................................CATATTGTCCTGTCACAGCAGT...................................................................................................................................................	22	1	48.00	1.00	1.00	46.00
..........................................................ATATTGTCCTGTCGCAGCAGT...................................................................................................................................................	21	1	47.00	5.00	10.00	32.00
..........................................................ATATTATCCTGTCACAGCAGT...................................................................................................................................................	21	1	47.00	3.00	5.00	39.00
..........................................................ATATTGTCCTGTCACCGCAGT...................................................................................................................................................	21	1	46.00	2.00	9.00	35.00
..........................................................ACATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	45.00	0.00	40.00	5.00
............................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................	20	1	44.00	1.00	35.00	8.00
..........................................................ATATTGTCCTGTCATAGCAGT...................................................................................................................................................	21	1	43.00	5.00	12.00	26.00
..........................................................GTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	42.00	2.00	13.00	27.00
..........................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................	23	1	40.00	0.00	8.00	32.00
..........................................................ATACTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	38.00	3.00	7.00	28.00
..........................................................ATATTGTCATGTCACAGCAGT...................................................................................................................................................	21	1	38.00	3.00	3.00	32.00
..........................................................ATATTGTCCTGTCACAGCAAT...................................................................................................................................................	21	1	37.00	0.00	3.00	34.00
..........................................................ATATTGTCCTGTTACAGCAGT...................................................................................................................................................	21	1	37.00	1.00	20.00	16.00
..........................................................ATATTGTCCTGTCATAGCAGTA..................................................................................................................................................	22	1	37.00	0.00	30.00	7.00
..........................................................ATATTGTCCxxTCACAGCAGT...................................................................................................................................................	19	1	36.00	3.00	5.00	28.00
..........................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................	22	1	36.00	7.00	5.00	24.00
..........................................................ATATTGTCCTGTCACAGCTGT...................................................................................................................................................	21	1	35.00	30.00	1.00	4.00
..........................................................ATATTGTTCTGTCACAGCAGT...................................................................................................................................................	21	1	35.00	3.00	18.00	14.00
..........................................................ATATTGTCCTGTCACAGAAGT...................................................................................................................................................	21	1	32.00	1.00	1.00	30.00
..........................................................ATATTGTCCTGTCACAGC......................................................................................................................................................	18	1	32.00	0.00	1.00	31.00
..........................................................ATCTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	31.00	9.00	5.00	17.00
..........................................................ATATCGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	31.00	5.00	9.00	17.00
..........................................................ATATTCTCCTGTCACAGCAGT...................................................................................................................................................	21	1	30.00	1.00	7.00	22.00
..........................................................ATATTGTCCTGTCACATCAGT...................................................................................................................................................	21	1	30.00	2.00	3.00	25.00
...........................................................TATTGTCCTGTCACAGCAGTT..................................................................................................................................................	21	1	28.00	0.00	0.00	28.00
..........................................................AAATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	28.00	0.00	0.00	28.00
..........................................................ATATTGTCCTGTCACACCAGT...................................................................................................................................................	21	1	28.00	3.00	5.00	20.00
..........................................................ATATTGTCCTGTCACAGTAGT...................................................................................................................................................	21	1	27.00	2.00	7.00	18.00
..........................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................	24	1	27.00	3.00	0.00	24.00
...........................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................	19	1	27.00	0.00	0.00	27.00
..........................................................ATATTGTCCTGTxxCAGCAGT...................................................................................................................................................	19	1	27.00	0.00	9.00	18.00
..........................................................ATATTGTCCAGTCACAGCAGT...................................................................................................................................................	21	1	26.00	0.00	1.00	25.00
..........................................................ATATTGTCCTGTCACAGCACT...................................................................................................................................................	21	1	26.00	3.00	1.00	22.00
..........................................................ATATTGTCTTGTCACAGCAGT...................................................................................................................................................	21	1	26.00	2.00	10.00	14.00
..........................................................ATATTGTCCTCTCACAGCAGT...................................................................................................................................................	21	1	26.00	1.00	1.00	24.00
..........................................................ATATTGTCCTATCACAGCAGT...................................................................................................................................................	21	1	26.00	3.00	1.00	22.00
..........................................................ATATTGTCCTGTTACAGCAGTA..................................................................................................................................................	22	1	24.00	0.00	23.00	1.00
..........................................................ATGTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	24.00	3.00	5.00	16.00
..........................................................ATATTGTCCTGTCACAGCAGTTT.................................................................................................................................................	23	1	22.00	0.00	0.00	22.00
..........................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................	20	1	21.00	0.00	0.00	21.00
..........................................................ATAATGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	20.00	1.00	3.00	16.00
..........................................................ATATTGTCCTGTCCCAGCAGT...................................................................................................................................................	21	1	20.00	2.00	3.00	15.00
..........................................................ATATTGTCCTTTCACAGCAGT...................................................................................................................................................	21	1	20.00	1.00	2.00	17.00
..........................................................ATATTGTCCTGTCAAAGCAGT...................................................................................................................................................	21	1	18.00	0.00	3.00	15.00
............................................................ATATTCCTGTCACAGCAGT...................................................................................................................................................	19	1	18.00	2.00	3.00	13.00
..........................................................ATATTGTCCTGTCACAGCATT...................................................................................................................................................	21	1	18.00	1.00	4.00	13.00
..........................................................ATATTGTCCTGCCACAGCAGTA..................................................................................................................................................	22	1	17.00	2.00	13.00	2.00
..........................................................ATATTGTCCTGTCACAACAGT...................................................................................................................................................	21	1	17.00	1.00	6.00	10.00
..........................................................ATATTCTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	16.00	0.00	11.00	5.00
..........................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................	22	1	16.00	0.00	12.00	4.00
..........................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................	21	1	16.00	0.00	2.00	14.00
.........................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................	21	1	15.00	0.00	13.00	2.00
..........................................................ATATTGTCCTGTCACACCAG....................................................................................................................................................	20	1	14.00	2.00	1.00	11.00
..........................................................ATATTGTCCTGTCACAGCCGTA..................................................................................................................................................	22	1	14.00	3.00	9.00	2.00
..........................................................ATGTTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	13.00	0.00	7.00	6.00
..........................................................ATATTGTCCTGACACAGCAGT...................................................................................................................................................	21	1	13.00	1.00	6.00	6.00
..........................................................ATATTGTCCTGTCACATCAGTA..................................................................................................................................................	22	1	13.00	0.00	6.00	7.00
..........................................................ATATAGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	13.00	0.00	1.00	12.00
..........................................................ATATTGTCCTGTxxCAGCAGTA..................................................................................................................................................	20	2	6.50	0.00	5.50	1.00
..........................................................ATATTGTCTTGTCACAGCAGTA..................................................................................................................................................	22	1	13.00	0.00	10.00	3.00
..........................................................ATATTGTCCTGTCACAGCGGTA..................................................................................................................................................	22	1	13.00	0.00	6.00	7.00
..........................................................ATATTGTCCTGTCACAGCCG....................................................................................................................................................	20	1	13.00	2.00	1.00	10.00
..........................................................ATATTGTCCTGTCACATCAG....................................................................................................................................................	20	1	12.00	0.00	0.00	12.00
..........................................................ATATTATCCTGTCACAGCAG....................................................................................................................................................	20	1	12.00	0.00	0.00	12.00
..........................................................ATATTGTCCTGTCGCAGCAGTA..................................................................................................................................................	22	1	12.00	0.00	10.00	2.00
..........................................................ATATTGTCCTGTCACACCAGTA..................................................................................................................................................	22	1	12.00	0.00	10.00	2.00
..........................................................ATTTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	12.00	0.00	4.00	8.00
..........................................................ATATTGTCCTGCCACAGCAG....................................................................................................................................................	20	1	12.00	0.00	0.00	12.00
..........................................................ATATTGTGCTGTCACAGCAGT...................................................................................................................................................	21	1	11.00	1.00	0.00	10.00
..........................................................ATATTGTCCTGTCACTGCAGT...................................................................................................................................................	21	1	11.00	0.00	8.00	3.00
..........................................................ATATTGCCCTGTCACAGCAGTA..................................................................................................................................................	22	1	11.00	0.00	7.00	4.00
..........................................................ATATTGTCCTGTCACAGTAGTA..................................................................................................................................................	22	1	10.00	0.00	7.00	3.00
..........................................................ATATTTTCCTGTCACAGCA.....................................................................................................................................................	19	1	10.00	0.00	0.00	10.00
..........................................................ATATTGTCCTGTCACAGT......................................................................................................................................................	18	1	10.00	0.00	0.00	10.00
..........................................................ATTTTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	10.00	0.00	10.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGCA..................................................................................................................................................	22	1	10.00	0.00	6.00	4.00
..........................................................ATATTGTCCTGTCGCAGCAG....................................................................................................................................................	20	1	10.00	0.00	0.00	10.00

droYak2

G-----------------------AATTG-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTA--TAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GAGGCG----------------------------------GCCAG-----------------------	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
..........................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	46131.00	912.00	17480.00	1159.00	25139.00	1441.00
..........................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	7400.00	3804.00	1115.00	34.00	1470.00	977.00
..........................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	6709.00	10.00	1789.00	24.00	2068.00	2818.00
..........................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................	22	1	1230.00	18.00	469.00	7.00	719.00	17.00
..........................................................ATATTGTCCTGTCACAGCCGT...................................................................................................................................................	21	1	774.00	12.00	177.00	0.00	581.00	4.00
..........................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................	19	1	655.00	2.00	217.00	3.00	373.00	60.00
..........................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................	23	1	625.00	21.00	264.00	3.00	332.00	5.00
..........................................................ATATTGTCCTGTCACATCAGT...................................................................................................................................................	21	1	393.00	2.00	108.00	4.00	278.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................	21	1	391.00	0.00	36.00	1.00	184.00	170.00
..........................................................ATATTGTCCTGTCACCGCAGT...................................................................................................................................................	21	1	368.00	0.00	62.00	0.00	306.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................	21	1	345.00	4.00	66.00	1.00	107.00	167.00
..........................................................ATATTGTCCTGTCACAGCATT...................................................................................................................................................	21	1	235.00	0.00	39.00	0.00	196.00	0.00
..........................................................ATATTGGCCTGTCACAGCAGT...................................................................................................................................................	21	1	182.00	4.00	24.00	1.00	151.00	2.00
..........................................................ATATTGTCCTGTCACAGCGGT...................................................................................................................................................	21	1	157.00	3.00	27.00	2.00	125.00	0.00
..........................................................ATATTGTCCTTTCACAGCAGT...................................................................................................................................................	21	1	150.00	1.00	61.00	1.00	84.00	3.00
..........................................................ATATTGTCCTGTCCCAGCAGT...................................................................................................................................................	21	1	149.00	1.00	24.00	0.00	124.00	0.00
..........................................................ATATTGTCCTGGCACAGCAGT...................................................................................................................................................	21	1	136.00	1.00	39.00	0.00	96.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGT...................................................................................................................................................	21	1	134.00	3.00	39.00	0.00	92.00	0.00
..........................................................ATATTGTCCTGTCACAGCTGT...................................................................................................................................................	21	1	130.00	1.00	21.00	0.00	107.00	1.00
..........................................................ATATTGCCCTGTCACAGCAGT...................................................................................................................................................	21	1	128.00	1.00	27.00	1.00	97.00	2.00
..........................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................	21	1	102.00	1.00	20.00	0.00	77.00	4.00
..........................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................	22	1	100.00	12.00	30.00	0.00	52.00	6.00
..........................................................ATATTGTCCTGTCACAGCCG....................................................................................................................................................	20	1	99.00	0.00	20.00	0.00	58.00	21.00
..........................................................ATATTGTCCTGTCACACCAGT...................................................................................................................................................	21	1	99.00	0.00	15.00	0.00	84.00	0.00
..........................................................ATGTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	89.00	1.00	27.00	0.00	61.00	0.00
..........................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................	20	1	83.00	0.00	1.00	0.00	6.00	76.00
..........................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................	23	1	78.00	4.00	23.00	1.00	28.00	22.00
..........................................................ATATTGTACTGTCACAGCAGT...................................................................................................................................................	21	1	77.00	1.00	17.00	0.00	59.00	0.00
..........................................................ATATTGTCCTGTCACAGCACT...................................................................................................................................................	21	1	71.00	0.00	23.00	0.00	48.00	0.00
..........................................................ATATTGTCCTGTCACAGCCGTA..................................................................................................................................................	22	1	70.00	32.00	8.00	0.00	28.00	2.00
..........................................................AGATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	70.00	0.00	16.00	0.00	54.00	0.00
..........................................................ATAGTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	69.00	0.00	22.00	0.00	47.00	0.00
..........................................................ATATTGTCCTGTCACAGC......................................................................................................................................................	18	1	67.00	0.00	3.00	0.00	4.00	60.00
.........................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................	22	1	65.00	35.00	2.00	0.00	6.00	22.00
..........................................................ATATTGTCCTGTCACGGCAGT...................................................................................................................................................	21	1	59.00	0.00	14.00	0.00	45.00	0.00
..........................................................ATATTGTCCTGTCACAACAGT...................................................................................................................................................	21	1	58.00	0.00	21.00	1.00	35.00	1.00
..........................................................ATATTGTCCTGTCAAAGCAGT...................................................................................................................................................	21	1	56.00	2.00	7.00	1.00	46.00	0.00
..........................................................ATATTGTCCTGTCACAGAAGT...................................................................................................................................................	21	1	55.00	0.00	12.00	1.00	42.00	0.00
..........................................................ATATCGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	54.00	0.00	26.00	3.00	25.00	0.00
..........................................................ATATTGTCCCGTCACAGCAGT...................................................................................................................................................	21	1	54.00	0.00	17.00	0.00	36.00	1.00
..........................................................ATATTGTCCTGTCGCAGCAGT...................................................................................................................................................	21	1	53.00	1.00	21.00	1.00	29.00	1.00
..........................................................ATACTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	52.00	1.00	21.00	1.00	29.00	0.00
..........................................................ATATTGTCCTGTTACAGCAGT...................................................................................................................................................	21	1	52.00	0.00	28.00	1.00	22.00	1.00
..........................................................ATATTGTCCTATCACAGCAGT...................................................................................................................................................	21	1	51.00	2.00	16.00	2.00	31.00	0.00
..........................................................ATATTATCCTGTCACAGCAGT...................................................................................................................................................	21	1	50.00	0.00	20.00	0.00	28.00	2.00
..........................................................ATATTGTCCTGTCACCGCCGT...................................................................................................................................................	21	1	50.00	1.00	8.00	0.00	41.00	0.00
..........................................................ATATTGTCCTCTCACAGCAGT...................................................................................................................................................	21	1	48.00	1.00	13.00	1.00	33.00	0.00
..........................................................ATATTGTCCTGTCACATCAG....................................................................................................................................................	20	1	48.00	0.00	12.00	0.00	31.00	5.00
..........................................................ACATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	48.00	1.00	18.00	0.00	29.00	0.00
..........................................................ATATTCTCCTGTCACAGCAGT...................................................................................................................................................	21	1	48.00	1.00	12.00	1.00	34.00	0.00
..........................................................ATATTGTCCTGTAACAGCAGT...................................................................................................................................................	21	1	48.00	0.00	14.00	0.00	34.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTCA.................................................................................................................................................	23	1	47.00	0.00	24.00	3.00	20.00	0.00
..........................................................ATATTGTCCTGTCACTGCAGT...................................................................................................................................................	21	1	46.00	1.00	7.00	0.00	38.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTGT.................................................................................................................................................	23	1	46.00	0.00	18.00	2.00	25.00	1.00
..........................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................	20	1	45.00	0.00	10.00	0.00	33.00	2.00
..........................................................ATCTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	44.00	0.00	8.00	1.00	35.00	0.00
..........................................................ATATTGTCCTGTCATAGCAGT...................................................................................................................................................	21	1	43.00	0.00	16.00	1.00	26.00	0.00
..........................................................ATATTGACCTGTCACAGCAGT...................................................................................................................................................	21	1	43.00	3.00	4.00	0.00	36.00	0.00
..........................................................ATATTGTCCTGTCACATCATT...................................................................................................................................................	21	1	42.00	0.00	8.00	0.00	34.00	0.00
..........................................................ATATTGTCTTGTCACAGCAGT...................................................................................................................................................	21	1	41.00	1.00	10.00	0.00	29.00	1.00
..........................................................GTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	38.00	3.00	17.00	0.00	18.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................	22	1	37.00	11.00	8.00	0.00	11.00	7.00
..........................................................ATATTGTCCTGTCACATCAGTA..................................................................................................................................................	22	1	37.00	4.00	14.00	0.00	19.00	0.00
..........................................................ATATTGTCATGTCACAGCAGT...................................................................................................................................................	21	1	36.00	2.00	9.00	0.00	24.00	1.00
..........................................................ATATTGTCCTGTCACAGTAGT...................................................................................................................................................	21	1	35.00	1.00	10.00	2.00	22.00	0.00
..........................................................ATATTGTCCGGTCACAGCAGT...................................................................................................................................................	21	1	35.00	0.00	12.00	0.00	23.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................	24	1	34.00	0.00	11.00	1.00	19.00	3.00
..........................................................ATATTGTCCTGTCTCAGCAGT...................................................................................................................................................	21	1	34.00	0.00	4.00	0.00	30.00	0.00
..........................................................ATATTTTCCTGTCACAGCAGT...................................................................................................................................................	21	1	29.00	0.00	6.00	0.00	23.00	0.00
..........................................................ATATTGTCCTGTCCCAGCCGT...................................................................................................................................................	21	1	27.00	0.00	2.00	0.00	25.00	0.00
...........................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................	20	1	26.00	0.00	12.00	0.00	14.00	0.00
..........................................................ATATTGTCCTGTCACAGCGG....................................................................................................................................................	20	1	26.00	0.00	5.00	0.00	9.00	12.00
..........................................................ATATTGTCCTGTCACAGCAGTTT.................................................................................................................................................	23	1	25.00	0.00	13.00	0.00	11.00	1.00
.........................................................CATATTGTCCTGTCACAGCAGT...................................................................................................................................................	22	1	24.00	2.00	10.00	1.00	11.00	0.00
..........................................................ATATTGTGCTGTCACAGCAGT...................................................................................................................................................	21	1	24.00	0.00	9.00	0.00	15.00	0.00
..........................................................ATATTGTCCTGACACAGCAGT...................................................................................................................................................	21	1	24.00	3.00	7.00	0.00	14.00	0.00
..........................................................ATATTGTCCTGGCACAGCAGG...................................................................................................................................................	21	1	22.00	1.00	6.00	0.00	15.00	0.00
..........................................................ATATTGTCCTGTCACAGCCGC...................................................................................................................................................	21	1	22.00	0.00	1.00	0.00	21.00	0.00
...............................................................................................................................TTGTTGAGCGTCATTAGCAAC..............................................................................	21	1	22.00	0.00	0.00	0.00	2.00	20.00
..........................................................ATATTGTCCTGTCACCGCAG....................................................................................................................................................	20	1	22.00	0.00	5.00	0.00	17.00	0.00
..........................................................ATATTGGCCTGTCACAGCAGTA..................................................................................................................................................	22	1	21.00	9.00	1.00	0.00	11.00	0.00
.........................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................	21	1	21.00	13.00	1.00	0.00	1.00	6.00
..........................................................ATATTGTCCTGTCACAGCCGTT..................................................................................................................................................	22	1	21.00	0.00	6.00	0.00	15.00	0.00
..........................................................ATATTGTCATGTCACAGCAGTA..................................................................................................................................................	22	1	20.00	14.00	1.00	0.00	5.00	0.00
..........................................................CTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	20.00	1.00	13.00	0.00	6.00	0.00
..........................................................ATATTGTCCTGTCACAGCAAT...................................................................................................................................................	21	1	20.00	0.00	10.00	0.00	10.00	0.00
..........................................................TTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	20.00	0.00	9.00	0.00	11.00	0.00
..........................................................ATATTGTCCTGTCACCGCAGTA..................................................................................................................................................	22	1	20.00	7.00	1.00	0.00	12.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGGA..................................................................................................................................................	22	1	19.00	7.00	1.00	0.00	11.00	0.00
..........................................................ATATGGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	19.00	0.00	1.00	0.00	18.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................	23	1	19.00	1.00	4.00	0.00	12.00	2.00
..........................................................ATATTGTCCTGGCACAGCAGTA..................................................................................................................................................	22	1	19.00	7.00	2.00	0.00	10.00	0.00
..........................................................ATATTGTCCTTTCACAGCAG....................................................................................................................................................	20	1	18.00	0.00	6.00	0.00	9.00	3.00
..........................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................	20	1	18.00	0.00	6.00	0.00	12.00	0.00
..........................................................ATATTGCCCTGTCACAGCAGTA..................................................................................................................................................	22	1	18.00	9.00	1.00	0.00	4.00	4.00
..........................................................ATATTGTCCTGTCACAGCAGCA..................................................................................................................................................	22	1	17.00	5.00	3.00	0.00	9.00	0.00
..........................................................ATATTGTTCTGTCACAGCAGT...................................................................................................................................................	21	1	17.00	1.00	5.00	0.00	10.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................	23	1	17.00	1.00	3.00	0.00	10.00	3.00
..........................................................ATATTGTCCTGTCACAGCATTA..................................................................................................................................................	22	1	17.00	0.00	5.00	0.00	12.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGTA..................................................................................................................................................	22	1	17.00	7.00	6.00	0.00	2.00	2.00
..........................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................	22	1	16.00	1.00	5.00	0.00	10.00	0.00

droEre2

TATAC--CAT-------------GAAATC-------------G-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTA--TAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GCGGCG----------------------------------GTCAG-----------------------	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
..........................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	55796.00	1131.00	6048.00	885.00	47732.00
..........................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	10566.00	2723.00	559.00	652.00	6632.00
..........................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	6323.00	13.00	599.00	7.00	5704.00
..........................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................	19	1	5137.00	3.00	219.00	2.00	4913.00
..........................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................	23	1	1750.00	27.00	86.00	12.00	1625.00
..........................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................	22	1	1611.00	15.00	128.00	8.00	1460.00
..........................................................ATATTGTCATGTCACAGCAGT...................................................................................................................................................	21	1	357.00	1.00	4.00	0.00	352.00
..........................................................ATATTGTCCTGTCACATCAGT...................................................................................................................................................	21	1	335.00	22.00	53.00	15.00	245.00
..........................................................ATATTGTCCTGTAACAGCAGT...................................................................................................................................................	21	1	287.00	0.00	5.00	1.00	281.00
..........................................................ATATTGTACTGTCACAGCAGT...................................................................................................................................................	21	1	274.00	1.00	3.00	1.00	269.00
..........................................................ATATTGTCCTGTCACAGAAGT...................................................................................................................................................	21	1	200.00	1.00	9.00	0.00	190.00
..........................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................	21	1	171.00	2.00	16.00	0.00	153.00
..........................................................ATATTGTCCTTTCACAGCAGT...................................................................................................................................................	21	1	168.00	8.00	22.00	9.00	129.00
..........................................................ATATTGTCCTGTCACAGCCGT...................................................................................................................................................	21	1	168.00	17.00	73.00	24.00	54.00
..........................................................ATATTTTCCTGTCACAGCAGT...................................................................................................................................................	21	1	151.00	4.00	3.00	6.00	138.00
..........................................................ATATTGTCCTGTCACAGCATT...................................................................................................................................................	21	1	147.00	5.00	28.00	7.00	107.00
..........................................................ATATTGTCCTGTCAAAGCAGT...................................................................................................................................................	21	1	132.00	1.00	9.00	1.00	121.00
..........................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................	21	1	131.00	6.00	22.00	5.00	98.00
..........................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................	23	1	129.00	3.00	12.00	4.00	110.00
...........................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................	20	1	121.00	1.00	12.00	0.00	108.00
..........................................................ATATTGTCCTGTCACATCAGTA..................................................................................................................................................	22	1	115.00	60.00	5.00	9.00	41.00
...........................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................	21	1	107.00	9.00	4.00	0.00	94.00
..........................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................	24	1	99.00	1.00	4.00	0.00	94.00
..........................................................ATATTGTCCTGCCACAGCAGT...................................................................................................................................................	21	1	97.00	2.00	14.00	4.00	77.00
..........................................................ATATTGTCCTGTCACCGCAGT...................................................................................................................................................	21	1	88.00	1.00	29.00	6.00	52.00
.........................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................	22	1	85.00	16.00	23.00	0.00	46.00
..........................................................ATATTGTCCCGTCACAGCAGT...................................................................................................................................................	21	1	84.00	0.00	4.00	2.00	78.00
..........................................................ATATTGTCCTGTCACAGCGGT...................................................................................................................................................	21	1	83.00	0.00	27.00	4.00	52.00
..........................................................ATATTGCCCTGTCACAGCAGT...................................................................................................................................................	21	1	76.00	3.00	5.00	3.00	65.00
..........................................................ATCTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	71.00	1.00	7.00	0.00	63.00
..........................................................ATATTGTCCTGTCGCAGCAGT...................................................................................................................................................	21	1	69.00	1.00	6.00	4.00	58.00
..........................................................ACATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	68.00	2.00	6.00	1.00	59.00
..........................................................ATATTGTCCTGTCACAGCAGTGT.................................................................................................................................................	23	1	67.00	0.00	11.00	0.00	56.00
..........................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................	22	1	66.00	9.00	15.00	7.00	35.00
............................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................	19	1	63.00	1.00	6.00	0.00	56.00
..........................................................ATATTGTCCTGTCACACCAGT...................................................................................................................................................	21	1	62.00	3.00	8.00	5.00	46.00
..........................................................ATATTGTCCTGTCACAGC......................................................................................................................................................	18	1	61.00	0.00	1.00	0.00	60.00
..........................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................	22	1	60.00	10.00	4.00	3.00	43.00
..........................................................GTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	59.00	0.00	4.00	4.00	51.00
..........................................................ATATTGTCCTGTTACAGCAGT...................................................................................................................................................	21	1	59.00	0.00	12.00	2.00	45.00
..........................................................ATGTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	59.00	0.00	4.00	1.00	54.00
..........................................................ATATTGTCCTGTCATAGCAGT...................................................................................................................................................	21	1	54.00	2.00	5.00	1.00	46.00
..........................................................ATATTGTCCTGTCCCAGCAGT...................................................................................................................................................	21	1	54.00	1.00	18.00	1.00	34.00
..........................................................ATATTGTCCTGTCACGGCAGT...................................................................................................................................................	21	1	49.00	2.00	6.00	3.00	38.00
..........................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................	21	1	49.00	3.00	13.00	3.00	30.00
..........................................................ATATTGTCCTGTCACAGCACT...................................................................................................................................................	21	1	49.00	12.00	4.00	4.00	29.00
..........................................................ATATTGTCATGTCACAGCAGTA..................................................................................................................................................	22	1	47.00	1.00	1.00	1.00	44.00
..........................................................ATATTGTCCTGTCACATCAG....................................................................................................................................................	20	1	46.00	1.00	7.00	0.00	38.00
..........................................................ATATTGTCCTCTCACAGCAGT...................................................................................................................................................	21	1	46.00	1.00	5.00	4.00	36.00
..........................................................ATATCGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	44.00	1.00	2.00	0.00	41.00
..........................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................	20	1	43.00	0.00	7.00	0.00	36.00
..........................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................	23	1	43.00	0.00	1.00	0.00	42.00
..........................................................ATATTGTCCTGTCACAGTAGT...................................................................................................................................................	21	1	43.00	0.00	5.00	0.00	38.00
..........................................................ATATTCTCCTGTCACAGCAGT...................................................................................................................................................	21	1	42.00	1.00	6.00	3.00	32.00
..........................................................ATATTGTCCTTTCACAGCAGTA..................................................................................................................................................	22	1	42.00	17.00	3.00	5.00	17.00
..........................................................ATATTATCCTGTCACAGCAGT...................................................................................................................................................	21	1	41.00	2.00	5.00	2.00	32.00
..........................................................ATACTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	41.00	2.00	3.00	1.00	35.00
..........................................................ATATTGTCCTGTCACAACAGT...................................................................................................................................................	21	1	40.00	2.00	7.00	1.00	30.00
..........................................................ATATTGTCCTGTCACAGCATTA..................................................................................................................................................	22	1	39.00	14.00	2.00	5.00	18.00
..........................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................	23	1	39.00	3.00	5.00	1.00	30.00
..........................................................ATATTGTCCTGTAACAGCAGTA..................................................................................................................................................	22	1	38.00	0.00	1.00	0.00	37.00
..........................................................ATTTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	38.00	0.00	1.00	1.00	36.00
..........................................................ATATTGTCCTATCACAGCAGT...................................................................................................................................................	21	1	38.00	0.00	9.00	3.00	26.00
..........................................................ATATTGTTCTGTCACAGCAGT...................................................................................................................................................	21	1	38.00	2.00	6.00	0.00	30.00
..........................................................ATATTGTCCTGTxxCAGCAGT...................................................................................................................................................	19	1	38.00	1.00	0.00	0.00	37.00
..........................................................ATATTGTCCxxTCACAGCAGT...................................................................................................................................................	19	1	37.00	0.00	0.00	0.00	37.00
..........................................................ATATTGTCCTGTCACATCA.....................................................................................................................................................	19	1	37.00	0.00	3.00	0.00	34.00
..........................................................ATATTGTCTTGTCACAGCAGT...................................................................................................................................................	21	1	36.00	0.00	10.00	2.00	24.00
.........................................................CATATTGTCCTGTCACAGCAGT...................................................................................................................................................	22	1	36.00	0.00	5.00	0.00	31.00
..........................................................ATATTGTCATGTCACAGCA.....................................................................................................................................................	19	1	36.00	0.00	1.00	0.00	35.00
..........................................................TTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	35.00	2.00	1.00	0.00	32.00
..........................................................ATATTTTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	34.00	11.00	1.00	2.00	20.00
..........................................................ATATTGTACTGTCACAGCAGTA..................................................................................................................................................	22	1	33.00	2.00	1.00	0.00	30.00
..........................................................ATATTGTCCTGTCACAGCCGTA..................................................................................................................................................	22	1	33.00	19.00	4.00	4.00	6.00
..........................................................ATAGTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	33.00	2.00	7.00	0.00	24.00
..........................................................ATATTGTCCTGTCACAGCAGTGA.................................................................................................................................................	23	1	32.00	0.00	0.00	0.00	32.00
..........................................................CTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	32.00	2.00	4.00	1.00	25.00
..........................................................ATATTGTACTGTCACAGCAG....................................................................................................................................................	20	1	30.00	0.00	0.00	0.00	30.00
..........................................................ATATTGTCCTGTCACAGCAGGA..................................................................................................................................................	22	1	29.00	20.00	1.00	4.00	4.00
..........................................................ATATTGTCATGTCACAGCAG....................................................................................................................................................	20	1	29.00	0.00	0.00	0.00	29.00
..........................................................ATAATGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	29.00	0.00	4.00	1.00	24.00
..........................................................ATATTGTCCTGTCACAGCAGCA..................................................................................................................................................	22	1	29.00	18.00	1.00	1.00	9.00
..........................................................ATATTGTACTGTCACAGCA.....................................................................................................................................................	19	1	28.00	0.00	0.00	0.00	28.00
..........................................................ATATTGTCCTGTCACAGCAGTTT.................................................................................................................................................	23	1	28.00	0.00	3.00	0.00	25.00
..........................................................ATATTGTCCTTTCACAGCA.....................................................................................................................................................	19	1	27.00	0.00	1.00	0.00	26.00
..........................................................ATATTGTCCTGTCACAGCAGTTG.................................................................................................................................................	23	1	27.00	0.00	3.00	0.00	24.00
..........................................................ATATTGGCCTGTCACAGCAGT...................................................................................................................................................	21	1	27.00	13.00	9.00	1.00	4.00
..........................................................ATATTGTCCTGTCACCGCAGTA..................................................................................................................................................	22	1	26.00	14.00	1.00	1.00	10.00
..........................................................ATATTGTCCTGCCACAGCAGTA..................................................................................................................................................	22	1	26.00	6.00	1.00	5.00	14.00
............................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................	20	1	25.00	0.00	0.00	0.00	25.00
..........................................................ATATTGTCCTGTCAAAGCAGTA..................................................................................................................................................	22	1	25.00	4.00	1.00	0.00	20.00
..........................................................ATATTGTCCTGTCACTGCAGT...................................................................................................................................................	21	1	23.00	0.00	5.00	1.00	17.00
..........................................................ATATTGTCCTGTAACAGCAG....................................................................................................................................................	20	1	23.00	0.00	0.00	0.00	23.00
..........................................................ATATTGTCCTGTCACAGAAGTA..................................................................................................................................................	22	1	23.00	0.00	1.00	0.00	22.00
..........................................................ATATTGTCCTGTCACAGCACTA..................................................................................................................................................	22	1	21.00	13.00	2.00	3.00	3.00
..........................................................ATATTGTCCTGTAACAGCA.....................................................................................................................................................	19	1	21.00	0.00	0.00	0.00	21.00
..........................................................ATATTGTCCTGTCACAGAAG....................................................................................................................................................	20	1	20.00	0.00	0.00	0.00	20.00
..........................................................ATATTGTCCTTTCACAGCAG....................................................................................................................................................	20	1	19.00	0.00	3.00	0.00	16.00
..........................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................	20	1	19.00	0.00	2.00	0.00	17.00
............................................................ATATTCCTGTCACAGCAGT...................................................................................................................................................	19	1	19.00	0.00	0.00	0.00	19.00
..........................................................ATATTCTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	19.00	7.00	1.00	1.00	10.00

droAna3

TA------------------------------------------GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GGA-----------------------------------------G-----------------------	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
..........................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	52523.00	2408.00	34186.00	15698.00	231.00
..........................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	8613.00	66.00	6898.00	1264.00	385.00
..........................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	7515.00	52.00	5468.00	1987.00	8.00
..........................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................	22	1	5652.00	58.00	4620.00	973.00	1.00
..........................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................	19	1	2051.00	4.00	1571.00	475.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................	23	1	1152.00	7.00	902.00	230.00	13.00
..........................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................	21	1	771.00	38.00	644.00	88.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTGT.................................................................................................................................................	23	1	484.00	37.00	268.00	179.00	0.00
..........................................................ATATTGTCCTGTCACATCAGT...................................................................................................................................................	21	1	419.00	16.00	326.00	70.00	7.00
..........................................................ATATTGTCCTGTCACAGAAGT...................................................................................................................................................	21	1	326.00	15.00	281.00	30.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................	21	1	256.00	10.00	106.00	139.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTGA.................................................................................................................................................	23	1	222.00	2.00	214.00	6.00	0.00
..........................................................ATATTGTCATGTCACAGCAGT...................................................................................................................................................	21	1	190.00	6.00	111.00	73.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTTT.................................................................................................................................................	23	1	183.00	3.00	114.00	66.00	0.00
..........................................................ATATTGGCCTGTCACAGCAGT...................................................................................................................................................	21	1	173.00	2.00	6.00	163.00	2.00
..........................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................	23	1	161.00	0.00	134.00	27.00	0.00
..........................................................ATATTGTCCTGTCACAGCCGT...................................................................................................................................................	21	1	159.00	2.00	10.00	143.00	4.00
..........................................................ATGTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	158.00	1.00	123.00	33.00	1.00
..........................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................	20	1	138.00	3.00	120.00	15.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................	23	1	135.00	5.00	109.00	21.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGT...................................................................................................................................................	21	1	135.00	7.00	40.00	88.00	0.00
..........................................................ATATTGCCCTGTCACAGCAGT...................................................................................................................................................	21	1	122.00	3.00	46.00	72.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTTG.................................................................................................................................................	23	1	117.00	2.00	71.00	44.00	0.00
..........................................................ATATTGTACTGTCACAGCAGT...................................................................................................................................................	21	1	114.00	4.00	60.00	50.00	0.00
..........................................................ATATTGTCCTGTCACAGCGGT...................................................................................................................................................	21	1	112.00	2.00	45.00	64.00	1.00
..........................................................GTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	103.00	4.00	64.00	35.00	0.00
..........................................................ATATTGTCCTGTCACAGCATT...................................................................................................................................................	21	1	101.00	1.00	44.00	51.00	5.00
..........................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................	21	1	99.00	9.00	22.00	67.00	1.00
..........................................................ATATTGTCCTGGCACAGCAGT...................................................................................................................................................	21	1	96.00	4.00	7.00	85.00	0.00
..........................................................ATATTGTCCTGTAACAGCAGT...................................................................................................................................................	21	1	90.00	8.00	54.00	28.00	0.00
..........................................................ATATTGTCCTGTCACACCAGT...................................................................................................................................................	21	1	82.00	2.00	14.00	66.00	0.00
..........................................................ATATTGACCTGTCACAGCAGT...................................................................................................................................................	21	1	82.00	4.00	6.00	72.00	0.00
..........................................................ATATTGTCCCGTCACAGCAGT...................................................................................................................................................	21	1	78.00	2.00	47.00	28.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTGG.................................................................................................................................................	23	1	77.00	0.00	69.00	8.00	0.00
..........................................................ACATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	77.00	6.00	52.00	19.00	0.00
..........................................................ATATTGTCCTGTCACATCAGTA..................................................................................................................................................	22	1	76.00	0.00	70.00	1.00	5.00
..........................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................	24	1	75.00	0.00	59.00	13.00	3.00
..........................................................ATATTGTCCTGTCACATCAG....................................................................................................................................................	20	1	74.00	0.00	55.00	19.00	0.00
..........................................................ATACTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	74.00	4.00	33.00	37.00	0.00
..........................................................ATATTGTCCTGTCACCGCAGT...................................................................................................................................................	21	1	72.00	3.00	7.00	62.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................	22	1	69.00	1.00	51.00	16.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTTA.................................................................................................................................................	23	1	68.00	3.00	45.00	20.00	0.00
..........................................................ATATTGTCCTGTCACAGCACT...................................................................................................................................................	21	1	65.00	0.00	14.00	50.00	1.00
..........................................................ATATTGTCCTTTCACAGCAGT...................................................................................................................................................	21	1	65.00	6.00	32.00	24.00	3.00
..........................................................ATATTTTCCTGTCACAGCAGT...................................................................................................................................................	21	1	63.00	4.00	51.00	6.00	2.00
..........................................................ATATTGTCCTCTCACAGCAGT...................................................................................................................................................	21	1	62.00	3.00	10.00	46.00	3.00
..........................................................ATATTGTCCTATCACAGCAGT...................................................................................................................................................	21	1	61.00	7.00	24.00	29.00	1.00
..........................................................ATATTGTCCTGTCACGGCAGT...................................................................................................................................................	21	1	61.00	1.00	29.00	30.00	1.00
..........................................................ATATTGTCCTGTCACAGAAGTA..................................................................................................................................................	22	1	59.00	0.00	58.00	1.00	0.00
..........................................................ATATTGTCCTGTCATAGCAGT...................................................................................................................................................	21	1	58.00	1.00	42.00	15.00	0.00
..........................................................ATATTGTCCTGTCGCAGCAGT...................................................................................................................................................	21	1	57.00	8.00	32.00	17.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTTGT................................................................................................................................................	24	1	57.00	6.00	22.00	29.00	0.00
..........................................................ATATTGTCCTGTCACATCAGTT..................................................................................................................................................	22	1	56.00	0.00	52.00	4.00	0.00
..........................................................ATATTGTCCTGTCACAGCTGT...................................................................................................................................................	21	1	55.00	0.00	6.00	49.00	0.00
..........................................................ATATTGTCCTGTCACAGAAGTT..................................................................................................................................................	22	1	55.00	1.00	52.00	2.00	0.00
..........................................................ATATCGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	54.00	1.00	32.00	21.00	0.00
..........................................................ATATTGTCTTGTCACAGCAGT...................................................................................................................................................	21	1	54.00	2.00	17.00	35.00	0.00
..........................................................AGATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	52.00	5.00	1.00	46.00	0.00
..........................................................ATATTGTCCTGTCACAGAAG....................................................................................................................................................	20	1	50.00	1.00	47.00	2.00	0.00
..........................................................ATATTGTCCTGACACAGCAGT...................................................................................................................................................	21	1	48.00	12.00	16.00	20.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGAA..................................................................................................................................................	22	1	48.00	1.00	43.00	4.00	0.00
..........................................................ATAGTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	47.00	1.00	2.00	44.00	0.00
...........................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................	20	1	45.00	2.00	29.00	14.00	0.00
..........................................................ATATTCTCCTGTCACAGCAGT...................................................................................................................................................	21	1	44.00	2.00	17.00	25.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGAT..................................................................................................................................................	22	1	44.00	1.00	37.00	6.00	0.00
..........................................................ATATTGTTCTGTCACAGCAGT...................................................................................................................................................	21	1	41.00	1.00	22.00	18.00	0.00
..........................................................ATATTATCCTGTCACAGCAGT...................................................................................................................................................	21	1	41.00	3.00	21.00	17.00	0.00
..........................................................ATATTGTCCTGTCACAACAGT...................................................................................................................................................	21	1	41.00	1.00	18.00	22.00	0.00
..........................................................ATATTGTCCTGTCACAGTAGT...................................................................................................................................................	21	1	40.00	3.00	20.00	17.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGCA..................................................................................................................................................	22	1	39.00	0.00	27.00	10.00	2.00
..........................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................	19	1	38.00	0.00	15.00	22.00	1.00
..........................................................ATATTGTCCTGTTACAGCAGT...................................................................................................................................................	21	1	37.00	3.00	21.00	13.00	0.00
..........................................................ATATTGTCCTGTCACAGC......................................................................................................................................................	18	1	36.00	0.00	17.00	18.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................	22	1	36.00	1.00	12.00	23.00	0.00
..........................................................ATATTGTCCTGTCCCAGCAGT...................................................................................................................................................	21	1	35.00	4.00	6.00	25.00	0.00
..........................................................ATATTGTCATGTCACAGCAGTA..................................................................................................................................................	22	1	35.00	2.00	26.00	7.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTAGT................................................................................................................................................	24	1	34.00	1.00	15.00	18.00	0.00
..........................................................ATATGGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	34.00	0.00	3.00	31.00	0.00
..........................................................ATATTGTCCGGTCACAGCAGT...................................................................................................................................................	21	1	34.00	0.00	4.00	30.00	0.00
............................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................	19	1	32.00	1.00	27.00	4.00	0.00
..........................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................	20	1	31.00	1.00	14.00	16.00	0.00
..........................................................ATATTGTCCTGTCAAAGCAGT...................................................................................................................................................	21	1	30.00	3.00	9.00	18.00	0.00
..........................................................ATATTGTCATGTCACAGCAG....................................................................................................................................................	20	1	28.00	1.00	13.00	14.00	0.00
..........................................................TTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	27.00	1.00	5.00	21.00	0.00
..........................................................ATATTGTCCxxTCACAGCAGT...................................................................................................................................................	19	1	26.00	3.00	23.00	0.00	0.00
..........................................................ATATTGGCCTGTCACAGCAG....................................................................................................................................................	20	1	25.00	0.00	2.00	23.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGTA..................................................................................................................................................	22	1	25.00	0.00	15.00	8.00	2.00
..........................................................ATGTTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	24.00	0.00	20.00	4.00	0.00
..........................................................ATATTGTCCTGTCACTGCAGT...................................................................................................................................................	21	1	24.00	6.00	7.00	11.00	0.00
..........................................................ATATTGTCCTGCCACAGCAG....................................................................................................................................................	20	1	24.00	2.00	9.00	13.00	0.00
..........................................................ATATTGTCCTGTCACATCA.....................................................................................................................................................	19	1	23.00	0.00	20.00	3.00	0.00
.........................................................CATATTGTCCTGTCACAGCAGT...................................................................................................................................................	22	1	23.00	0.00	7.00	16.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................	22	1	23.00	0.00	16.00	7.00	0.00
...........................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................	21	1	22.00	0.00	19.00	2.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGGA..................................................................................................................................................	22	1	22.00	0.00	13.00	7.00	2.00
..........................................................ATATTGTCCTGTCACAGCAGTTAT................................................................................................................................................	24	1	22.00	2.00	8.00	12.00	0.00
..........................................................ATCTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	22.00	1.00	13.00	8.00	0.00
..........................................................ATATTGTGCTGTCACAGCAGT...................................................................................................................................................	21	1	22.00	2.00	8.00	12.00	0.00
..........................................................ATATTGTCGTGTCACAGCAGT...................................................................................................................................................	21	1	22.00	1.00	9.00	12.00	0.00
..........................................................ATATTGTCCTGTCACAGCCG....................................................................................................................................................	20	1	21.00	0.00	0.00	21.00	0.00
..........................................................GTATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	21.00	0.00	16.00	5.00	0.00

dp4

TATCG--AATTA-CATACGGCGTCGGATCGGAGCAGATGAGAG-GGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAATTA--TAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAA--------AGAGAAGGAG---------------------------------AAGCTACAAAGCTACAAAGCTACGG	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
..........................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	13895.00	1506.00	2055.00	10327.00	7.00
..........................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	9388.00	86.00	8201.00	1093.00	8.00
..........................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	1095.00	38.00	20.00	1029.00	8.00
..........................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................	22	1	386.00	39.00	60.00	287.00	0.00
..........................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................	19	1	380.00	2.00	9.00	368.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................	23	1	169.00	2.00	51.00	116.00	0.00
.........................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................	22	1	124.00	4.00	95.00	25.00	0.00
..........................................................ATATTGTCCTGTCACAGCCGT...................................................................................................................................................	21	1	66.00	1.00	16.00	49.00	0.00
..........................................................ATATTGTCCTGTCACAGCCGTA..................................................................................................................................................	22	1	64.00	0.00	62.00	2.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGT...................................................................................................................................................	21	1	50.00	0.00	3.00	46.00	1.00
..........................................................ATATTGGCCTGTCACAGCAGT...................................................................................................................................................	21	1	45.00	0.00	9.00	36.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................	21	1	45.00	3.00	5.00	37.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGGA..................................................................................................................................................	22	1	42.00	0.00	36.00	6.00	0.00
..........................................................ATATTGGCCTGTCACAGCAGTA..................................................................................................................................................	22	1	42.00	0.00	39.00	3.00	0.00
..........................................................ATATTGTCCTGTCACCGCAGTA..................................................................................................................................................	22	1	38.00	0.00	37.00	1.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................	21	1	37.00	1.00	14.00	22.00	0.00
.........................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................	21	1	36.00	2.00	25.00	9.00	0.00
..........................................................ATATTGTCCTGGCACAGCAGT...................................................................................................................................................	21	1	35.00	0.00	8.00	27.00	0.00
..........................................................ATCTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	34.00	2.00	5.00	27.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................	22	1	34.00	1.00	20.00	13.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGCA..................................................................................................................................................	22	1	28.00	0.00	26.00	2.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................	22	1	28.00	0.00	26.00	2.00	0.00
..........................................................ATATTGTCATGTCACAGCAGTA..................................................................................................................................................	22	1	28.00	0.00	28.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................	21	1	27.00	1.00	2.00	24.00	0.00
..........................................................ATATTGTCCTGTCACAGCATT...................................................................................................................................................	21	1	25.00	0.00	2.00	23.00	0.00
..........................................................ATATTGTCATGTCACAGCAGT...................................................................................................................................................	21	1	25.00	0.00	10.00	15.00	0.00
..........................................................ATATTGTACTGTCACAGCAGTA..................................................................................................................................................	22	1	25.00	0.00	22.00	3.00	0.00
..........................................................ATATTGCCCTGTCACAGCAGT...................................................................................................................................................	21	1	24.00	3.00	3.00	18.00	0.00
..........................................................ATATTGTCCTGTCACACCAGT...................................................................................................................................................	21	1	24.00	0.00	2.00	22.00	0.00
..........................................................ATATTGTCCTGTCACAGCACT...................................................................................................................................................	21	1	22.00	1.00	6.00	15.00	0.00
..........................................................ATATTGTCCCGTCACAGCAGT...................................................................................................................................................	21	1	22.00	2.00	7.00	13.00	0.00
..........................................................ATATTGTCCTGTCAAAGCAGTA..................................................................................................................................................	22	1	21.00	0.00	20.00	1.00	0.00
..........................................................ATGTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	20.00	1.00	4.00	15.00	0.00
..........................................................ATATTGTCCTGGCACAGCAGTA..................................................................................................................................................	22	1	20.00	0.00	18.00	2.00	0.00
..........................................................ATATTGTCCTGTCACAGCGGT...................................................................................................................................................	21	1	20.00	1.00	5.00	14.00	0.00
..........................................................ATATTGTCCTGTCACAGAAGT...................................................................................................................................................	21	1	20.00	1.00	3.00	16.00	0.00
..........................................................ATATTGTCCTGTCACCGCAGT...................................................................................................................................................	21	1	20.00	0.00	7.00	13.00	0.00
..........................................................ATATTGTCCTGTCACATCAGT...................................................................................................................................................	21	1	20.00	1.00	4.00	15.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................	23	1	19.00	0.00	8.00	11.00	0.00
..........................................................ATATTGTCCTGTCATAGCAGTA..................................................................................................................................................	22	1	18.00	0.00	17.00	1.00	0.00
..........................................................ATATTGTCCTGTAACAGCAGT...................................................................................................................................................	21	1	17.00	0.00	4.00	13.00	0.00
..........................................................ATATTGTCCTGTAACAGCAGTA..................................................................................................................................................	22	1	16.00	0.00	15.00	1.00	0.00
..........................................................ATATTGTCCTGTCAAAGCAGT...................................................................................................................................................	21	1	16.00	1.00	3.00	12.00	0.00
..........................................................ATATTGTCCTGTCACAGCTGT...................................................................................................................................................	21	1	15.00	1.00	5.00	9.00	0.00
..........................................................ATATTGTCCTGTCACAGCTGTA..................................................................................................................................................	22	1	15.00	0.00	13.00	2.00	0.00
..........................................................GTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	15.00	1.00	1.00	13.00	0.00
..........................................................ATATTGCCCTGTCACAGCAGTA..................................................................................................................................................	22	1	15.00	0.00	15.00	0.00	0.00
..........................................................AGATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	15.00	0.00	1.00	14.00	0.00
...........................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................	20	1	15.00	2.00	5.00	8.00	0.00
..........................................................ATATTGTCTTGTCACAGCAGT...................................................................................................................................................	21	1	15.00	1.00	1.00	13.00	0.00
..........................................................ATATTGTCCTGTCACATCAGTA..................................................................................................................................................	22	1	14.00	0.00	12.00	2.00	0.00
..........................................................ATATTGACCTGTCACAGCAGTA..................................................................................................................................................	22	1	14.00	0.00	13.00	1.00	0.00
..........................................................ATATTGTCCTGTCACAACAGTA..................................................................................................................................................	22	1	14.00	0.00	13.00	1.00	0.00
..........................................................ATATTGTCCTGTCACACCAGTA..................................................................................................................................................	22	1	14.00	0.00	7.00	7.00	0.00
..........................................................AGATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	14.00	0.00	14.00	0.00	0.00
..........................................................ATATTGTCCTGTTACAGCAGTA..................................................................................................................................................	22	1	14.00	0.00	14.00	0.00	0.00
..........................................................ATATCGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	14.00	0.00	10.00	4.00	0.00
..........................................................ATATTGACCTGTCACAGCAGT...................................................................................................................................................	21	1	13.00	0.00	4.00	9.00	0.00
..........................................................ATACTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	13.00	2.00	1.00	10.00	0.00
..........................................................ATATTGTCCTGTCACAGCGGTA..................................................................................................................................................	22	1	13.00	0.00	10.00	3.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGTA..................................................................................................................................................	22	1	13.00	0.00	11.00	2.00	0.00
..........................................................ATATTGTCCTGTCGCAGCAGTA..................................................................................................................................................	22	1	13.00	0.00	11.00	2.00	0.00
..........................................................ATATTGTCCTGTCACAGAAGTA..................................................................................................................................................	22	1	13.00	0.00	11.00	2.00	0.00
..........................................................ATATTATCCTGTCACAGCAGT...................................................................................................................................................	21	1	13.00	0.00	4.00	9.00	0.00
..........................................................ATATTGTCCTGTCATAGCAGT...................................................................................................................................................	21	1	13.00	1.00	2.00	10.00	0.00
...........................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................	21	1	13.00	0.00	11.00	2.00	0.00
..........................................................ATATTATCCTGTCACAGCAGTA..................................................................................................................................................	22	1	12.00	0.00	12.00	0.00	0.00
..........................................................ATATTCTCCTGTCACAGCAGT...................................................................................................................................................	21	1	12.00	1.00	3.00	8.00	0.00
..........................................................ATATTGTCCGGTCACAGCAGT...................................................................................................................................................	21	1	12.00	0.00	2.00	10.00	0.00
..........................................................ATAGTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	12.00	0.00	10.00	2.00	0.00
..........................................................ATAGTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	12.00	0.00	6.00	6.00	0.00
..........................................................ATATTGTACTGTCACAGCAGT...................................................................................................................................................	21	1	12.00	1.00	7.00	4.00	0.00
..........................................................ATATTGTTCTGTCACAGCAGT...................................................................................................................................................	21	1	12.00	2.00	4.00	6.00	0.00
..........................................................ATATTGTCCTGTCACTGCAGTA..................................................................................................................................................	22	1	12.00	0.00	11.00	1.00	0.00
..........................................................ATATTGTCCTATCACAGCAGT...................................................................................................................................................	21	1	12.00	0.00	1.00	11.00	0.00
..........................................................ATATTGTCCTCTCACAGCAGTA..................................................................................................................................................	22	1	11.00	0.00	10.00	1.00	0.00
..........................................................ATATTGTCCTGTCACAGCCG....................................................................................................................................................	20	1	11.00	0.00	1.00	10.00	0.00
..........................................................ATATTGTCCTCTCACAGCAGT...................................................................................................................................................	21	1	11.00	1.00	1.00	9.00	0.00
..........................................................ATATTGTCCTGTCACAGTAGTA..................................................................................................................................................	22	1	11.00	0.00	9.00	2.00	0.00
..........................................................ATATTGTCCTGTCGCAGCAGT...................................................................................................................................................	21	1	11.00	1.00	0.00	10.00	0.00
................................................................................TTGTAAC--TTAATTA--TAGCCTA.........................................................................................................................	21	1	11.00	1.00	9.00	1.00	0.00
..........................................................ATATTGTCCTATCACAGCAGTA..................................................................................................................................................	22	1	11.00	0.00	9.00	2.00	0.00
..........................................................ATATTGTCCTTTCACAGCAGT...................................................................................................................................................	21	1	11.00	1.00	2.00	8.00	0.00
..........................................................ATATTGTCCCGTCACAGCAGTA..................................................................................................................................................	22	1	11.00	0.00	11.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAACAGT...................................................................................................................................................	21	1	11.00	0.00	3.00	8.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTTT.................................................................................................................................................	23	1	10.00	1.00	0.00	9.00	0.00
..........................................................ATATCGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	10.00	2.00	1.00	7.00	0.00
..........................................................ATATTGTCCTGTCCCAGCAGT...................................................................................................................................................	21	1	10.00	0.00	1.00	9.00	0.00
..........................................................ATATTGTCCTGTTACAGCAGT...................................................................................................................................................	21	1	10.00	0.00	3.00	7.00	0.00
..........................................................ATATTGTCCTGACACAGCAGT...................................................................................................................................................	21	1	10.00	1.00	0.00	9.00	0.00
..........................................................ATATTGTCCTTTCACAGCAGTA..................................................................................................................................................	22	1	9.00	0.00	7.00	2.00	0.00
..........................................................ATATTGTCCTGTCACGGCAGTA..................................................................................................................................................	22	1	9.00	0.00	9.00	0.00	0.00
..........................................................TTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	9.00	0.00	0.00	9.00	0.00
..........................................................ATGTTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	9.00	0.00	7.00	2.00	0.00
..........................................................ATATTGTGCTGTCACAGCAGT...................................................................................................................................................	21	1	9.00	0.00	6.00	3.00	0.00
..........................................................ATATTGTCCTGTCACGGCAGT...................................................................................................................................................	21	1	9.00	1.00	2.00	6.00	0.00
..........................................................ATATTGTCCTGTCACACCAG....................................................................................................................................................	20	1	9.00	0.00	0.00	9.00	0.00
..........................................................ATATTGGCCTGCCACAGCAGT...................................................................................................................................................	21	1	9.00	0.00	2.00	7.00	0.00
..........................................................GTATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	9.00	0.00	8.00	1.00	0.00
..........................................................ATATTGTCCTGTCACAGCATTA..................................................................................................................................................	22	1	9.00	0.00	8.00	1.00	0.00
..........................................................ATATTGTCCTGTCACAGTAGT...................................................................................................................................................	21	1	9.00	1.00	1.00	7.00	0.00

droPer1

TATCG--AATTA-CATACGGCGTCGGATCGGAGCAGATGAGAG-GGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAATTA--TAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAA--------AGAGCTA--------------------------------------------------CAAAGCTACGG	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
..........................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	54362.00	835.00	420.00	12502.00	40531.00	74.00
..........................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	4590.00	37.00	1169.00	1050.00	2069.00	265.00
..........................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	4056.00	12.00	12.00	1162.00	2792.00	78.00
..........................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................	22	1	1673.00	20.00	6.00	304.00	1343.00	0.00
..........................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................	19	1	898.00	2.00	4.00	347.00	545.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................	23	1	433.00	4.00	14.00	147.00	268.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................	21	1	418.00	2.00	0.00	64.00	347.00	5.00
..........................................................ATATTGGCCTGTCACAGCAGT...................................................................................................................................................	21	1	404.00	0.00	1.00	21.00	382.00	0.00
..........................................................ATATTGTCCTGTCACAGCCGT...................................................................................................................................................	21	1	309.00	0.00	5.00	55.00	249.00	0.00
..........................................................ATATTGCCCTGTCACAGCAGT...................................................................................................................................................	21	1	241.00	0.00	1.00	18.00	222.00	0.00
..........................................................ATATTGTCCTGTCACACCAGT...................................................................................................................................................	21	1	236.00	0.00	0.00	37.00	199.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................	21	1	227.00	0.00	1.00	28.00	186.00	12.00
..........................................................ATATTGTCCTGCCACAGCAGT...................................................................................................................................................	21	1	224.00	1.00	1.00	28.00	194.00	0.00
..........................................................ATATTGTCCTGTCACATCAGT...................................................................................................................................................	21	1	210.00	1.00	0.00	24.00	185.00	0.00
..........................................................ATATTGTCCTGGCACAGCAGT...................................................................................................................................................	21	1	198.00	0.00	0.00	13.00	185.00	0.00
..........................................................ATATTGTCCTGTCACAGCATT...................................................................................................................................................	21	1	193.00	0.00	2.00	24.00	167.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................	21	1	156.00	1.00	0.00	39.00	116.00	0.00
..........................................................ATATTGTACTGTCACAGCAGT...................................................................................................................................................	21	1	151.00	1.00	0.00	19.00	131.00	0.00
..........................................................ATATTGACCTGTCACAGCAGT...................................................................................................................................................	21	1	148.00	0.00	0.00	7.00	141.00	0.00
..........................................................ATATTGTCCTGTCACAGCGGT...................................................................................................................................................	21	1	143.00	0.00	1.00	16.00	126.00	0.00
..........................................................ATATTGTCATGTCACAGCAGT...................................................................................................................................................	21	1	130.00	1.00	2.00	10.00	117.00	0.00
..........................................................ATATTGTCCTGTCACAGCTGT...................................................................................................................................................	21	1	125.00	0.00	0.00	10.00	115.00	0.00
..........................................................ATATTGTCCTGTCACCGCAGT...................................................................................................................................................	21	1	123.00	0.00	1.00	17.00	105.00	0.00
..........................................................AGATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	120.00	0.00	0.00	5.00	114.00	1.00
..........................................................ATATTGTCCTGTCACAGCACT...................................................................................................................................................	21	1	112.00	0.00	0.00	16.00	96.00	0.00
..........................................................ATATTCTCCTGTCACAGCAGT...................................................................................................................................................	21	1	111.00	0.00	0.00	39.00	72.00	0.00
..........................................................ATATTATCCTGTCACAGCAGT...................................................................................................................................................	21	1	103.00	0.00	1.00	59.00	43.00	0.00
..........................................................TTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	102.00	1.00	0.00	4.00	97.00	0.00
..........................................................ATAGTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	97.00	0.00	0.00	2.00	95.00	0.00
..........................................................ATATTGTCTTGTCACAGCAGT...................................................................................................................................................	21	1	97.00	1.00	0.00	19.00	77.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................	23	1	94.00	0.00	2.00	25.00	67.00	0.00
..........................................................ATGTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	94.00	0.00	0.00	7.00	87.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................	22	1	92.00	0.00	4.00	15.00	73.00	0.00
..........................................................ATATTGTCCGGTCACAGCAGT...................................................................................................................................................	21	1	90.00	0.00	1.00	1.00	88.00	0.00
..........................................................ATATTGTCCCGTCACAGCAGT...................................................................................................................................................	21	1	84.00	1.00	0.00	13.00	70.00	0.00
..........................................................ATATTGTCCTGTCCCAGCAGT...................................................................................................................................................	21	1	80.00	1.00	1.00	14.00	64.00	0.00
..........................................................ATATTGTCCTCTCACAGCAGT...................................................................................................................................................	21	1	79.00	1.00	0.00	11.00	67.00	0.00
..........................................................ATATTGTCCTGTCACAGAAGT...................................................................................................................................................	21	1	78.00	0.00	0.00	20.00	58.00	0.00
..........................................................ATATTGTCCTGTTACAGCAGT...................................................................................................................................................	21	1	75.00	0.00	1.00	10.00	64.00	0.00
..........................................................ATATTGTCCTGTCAAAGCAGT...................................................................................................................................................	21	1	74.00	0.00	1.00	8.00	65.00	0.00
..........................................................ATATTGTCCTGTCACGGCAGT...................................................................................................................................................	21	1	73.00	0.00	0.00	8.00	65.00	0.00
..........................................................ATACTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	72.00	0.00	0.00	11.00	61.00	0.00
..........................................................ATATGGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	66.00	0.00	0.00	6.00	60.00	0.00
..........................................................ATATTGTCCTGTCGCAGCAGT...................................................................................................................................................	21	1	62.00	0.00	3.00	11.00	48.00	0.00
..........................................................ATATCGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	62.00	0.00	0.00	10.00	52.00	0.00
..........................................................ACATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	62.00	0.00	1.00	12.00	49.00	0.00
..........................................................ATATTGTCCTGTCATAGCAGT...................................................................................................................................................	21	1	60.00	1.00	0.00	8.00	51.00	0.00
..........................................................ATATTGTCCTGTAACAGCAGT...................................................................................................................................................	21	1	58.00	0.00	1.00	3.00	54.00	0.00
..........................................................GTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	57.00	0.00	1.00	11.00	45.00	0.00
..........................................................ATATTGTCCTTTCACAGCAGT...................................................................................................................................................	21	1	56.00	0.00	0.00	7.00	49.00	0.00
..........................................................ATATTGTCCTGTCACAGTAGT...................................................................................................................................................	21	1	56.00	0.00	0.00	8.00	48.00	0.00
..........................................................ATATTGTCCTGTCACAACAGT...................................................................................................................................................	21	1	55.00	0.00	0.00	16.00	39.00	0.00
.........................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................	22	1	55.00	1.00	15.00	26.00	1.00	12.00
..........................................................ATATTGTCCTATCACAGCAGT...................................................................................................................................................	21	1	54.00	0.00	1.00	13.00	40.00	0.00
..........................................................ATATTGTGCTGTCACAGCAGT...................................................................................................................................................	21	1	49.00	1.00	0.00	6.00	42.00	0.00
..........................................................ATATTGGCATGTCACAGCAGT...................................................................................................................................................	21	1	37.00	0.00	2.00	0.00	35.00	0.00
.........................................................CATATTGTCCTGTCACAGCAGT...................................................................................................................................................	22	1	36.00	0.00	2.00	14.00	20.00	0.00
..........................................................ATATTGTCCTGACACAGCAGT...................................................................................................................................................	21	1	36.00	0.00	0.00	9.00	27.00	0.00
..........................................................ATCTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	34.00	0.00	0.00	4.00	30.00	0.00
..........................................................ATATTTTCCTGTCACAGCAGT...................................................................................................................................................	21	1	34.00	1.00	1.00	12.00	20.00	0.00
..........................................................ATATTGTCCTGTCACAGCAAT...................................................................................................................................................	21	1	33.00	0.00	0.00	12.00	21.00	0.00
..........................................................ATATTGTCCTGTCACACCAG....................................................................................................................................................	20	1	32.00	0.00	0.00	8.00	24.00	0.00
..........................................................ATATTGTCCTGTCACTGCAGT...................................................................................................................................................	21	1	32.00	0.00	1.00	2.00	29.00	0.00
..........................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................	20	1	32.00	0.00	0.00	5.00	27.00	0.00
..........................................................ATATAGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	30.00	0.00	0.00	3.00	27.00	0.00
..........................................................ATATTGCCCTGTCACAGCAGC...................................................................................................................................................	21	1	30.00	0.00	0.00	1.00	29.00	0.00
..........................................................ATATTGTTCTGTCACAGCAGT...................................................................................................................................................	21	1	29.00	0.00	0.00	9.00	20.00	0.00
..........................................................ATATTGGCCTGTCACAGCAG....................................................................................................................................................	20	1	27.00	0.00	0.00	1.00	26.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTTT.................................................................................................................................................	23	1	27.00	0.00	0.00	7.00	20.00	0.00
..........................................................ATATTGTCCTGTCACAGCCGTA..................................................................................................................................................	22	1	27.00	0.00	17.00	3.00	7.00	0.00
..........................................................ATATTGTCCTGTCACATCAG....................................................................................................................................................	20	1	27.00	0.00	0.00	5.00	22.00	0.00
..........................................................ATATTGGCCTGCCACAGCAGT...................................................................................................................................................	21	1	27.00	0.00	0.00	1.00	26.00	0.00
...........................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................	20	1	27.00	0.00	0.00	6.00	21.00	0.00
..........................................................ATATTGTCCTGTCTCAGCAGT...................................................................................................................................................	21	1	26.00	0.00	0.00	7.00	19.00	0.00
..........................................................ATATTGGCCTGTCACAGCAGG...................................................................................................................................................	21	1	25.00	0.00	0.00	2.00	23.00	0.00
..........................................................ATATTGTCCTGTCACAGCCGC...................................................................................................................................................	21	1	24.00	0.00	0.00	6.00	18.00	0.00
..........................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................	19	1	24.00	0.00	0.00	2.00	22.00	0.00
..........................................................ATATTGTCGTGTCACAGCAGT...................................................................................................................................................	21	1	24.00	0.00	0.00	4.00	20.00	0.00
..........................................................ATATTGTCCTGGCACAGCAGG...................................................................................................................................................	21	1	24.00	0.00	0.00	2.00	22.00	0.00
..........................................................ATATTGTCCTGTCACAGCCG....................................................................................................................................................	20	1	23.00	0.00	0.00	4.00	19.00	0.00
..........................................................ATATTGTCCTGTCACCGCCGT...................................................................................................................................................	21	1	23.00	0.00	0.00	2.00	21.00	0.00
..........................................................AAATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	23.00	0.00	0.00	3.00	20.00	0.00
..........................................................ATATTGTCCTGCCACAGCAG....................................................................................................................................................	20	1	23.00	0.00	0.00	3.00	20.00	0.00
..........................................................ATATTGTCCTGTCAGAGCAGT...................................................................................................................................................	21	1	22.00	0.00	0.00	4.00	18.00	0.00
..........................................................ATATTGTCCTGGCACAGCAG....................................................................................................................................................	20	1	22.00	0.00	0.00	1.00	21.00	0.00
..........................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................	20	1	21.00	0.00	0.00	8.00	12.00	1.00
..........................................................ATATTGGCCTGTCACAGCAGTA..................................................................................................................................................	22	1	21.00	0.00	7.00	1.00	13.00	0.00
..........................................................AGATTGGCCTGTCACAGCAGT...................................................................................................................................................	21	1	20.00	0.00	0.00	0.00	20.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGTA..................................................................................................................................................	22	1	20.00	0.00	2.00	5.00	13.00	0.00
..........................................................CTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	20.00	0.00	0.00	4.00	16.00	0.00
..........................................................ATATTGTCCTGTCACAGCCTT...................................................................................................................................................	21	1	20.00	0.00	0.00	2.00	18.00	0.00
..........................................................ATATTGCCCTGTCACAGCAG....................................................................................................................................................	20	1	20.00	0.00	0.00	1.00	19.00	0.00
..........................................................ATAATGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	20.00	0.00	0.00	5.00	15.00	0.00
..........................................................ATATTGTCCTGTCACATCATT...................................................................................................................................................	21	1	19.00	0.00	0.00	4.00	15.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGG...................................................................................................................................................	21	1	19.00	0.00	1.00	1.00	17.00	0.00
..........................................................AGATTGTCCGGTCACAGCAGT...................................................................................................................................................	21	1	19.00	0.00	0.00	3.00	16.00	0.00
..........................................................ATATTGTCCTGTCACAGCTT....................................................................................................................................................	20	1	18.00	0.00	0.00	5.00	13.00	0.00
..........................................................ATATTGTCCTGTGACAGCAGT...................................................................................................................................................	21	1	18.00	0.00	1.00	2.00	15.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGGA..................................................................................................................................................	22	1	17.00	0.00	4.00	2.00	10.00	1.00
..........................................................ATATTGTCCTGCCACACCAGT...................................................................................................................................................	21	1	17.00	0.00	0.00	3.00	14.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGCA..................................................................................................................................................	22	1	17.00	0.00	1.00	4.00	12.00	0.00

droWil1

TAACA--AA--------------------------------AG-AGAGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATAGTAAC--ATATTCA--TTTCGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCTGTGGCAACGA--------GCGGAAAACTCTACTTCTGATGATGATAATAATGATTCAAGTCAA-----------------------	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
..........................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	91964.00	1661.00	17918.00	68042.00	4343.00
..........................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	53528.00	43.00	35992.00	13562.00	3931.00
..........................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	17521.00	41.00	360.00	7671.00	9449.00
..........................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................	19	1	4211.00	4.00	38.00	3922.00	247.00
..........................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................	23	1	1497.00	3.00	700.00	772.00	22.00
..........................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................	22	1	1147.00	7.00	36.00	1069.00	35.00
................................................................................TAGTAAC--ATATTCA--TTTCGTA.........................................................................................................................	21	1	625.00	0.00	412.00	72.00	141.00
..........................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................	21	1	485.00	3.00	35.00	137.00	310.00
.........................................................................................................CTGCTGAGCCGGGGCATTAACA...................................................................................................	22	1	406.00	1.00	298.00	30.00	77.00
..........................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................	21	1	399.00	2.00	6.00	31.00	360.00
..........................................................ATATTGTCCTGTCAAAGCAGT...................................................................................................................................................	21	1	301.00	1.00	13.00	287.00	0.00
..........................................................ATATTGTCCTGTCACAGAAGT...................................................................................................................................................	21	1	276.00	0.00	23.00	253.00	0.00
..........................................................ATATTGTACTGTCACAGCAGT...................................................................................................................................................	21	1	275.00	0.00	19.00	255.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................	21	1	272.00	2.00	5.00	262.00	3.00
..........................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................	23	1	259.00	1.00	63.00	160.00	35.00
..........................................................CTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	253.00	0.00	6.00	247.00	0.00
..........................................................ATATTGTCATGTCACAGCAGT...................................................................................................................................................	21	1	243.00	0.00	29.00	213.00	1.00
..........................................................ATATTGTCCTGTAACAGCAGT...................................................................................................................................................	21	1	227.00	0.00	21.00	196.00	10.00
..........................................................ATATTGTCCTGTCACAGC......................................................................................................................................................	18	1	225.00	0.00	6.00	16.00	203.00
..........................................................ATATTGTCCTGCCACAGCAGT...................................................................................................................................................	21	1	185.00	2.00	19.00	158.00	6.00
..........................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................	20	1	152.00	0.00	0.00	8.00	144.00
..........................................................ATATTGTCCTGTCACAACAGT...................................................................................................................................................	21	1	146.00	0.00	9.00	135.00	2.00
..........................................................TTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	144.00	0.00	4.00	140.00	0.00
..........................................................ATATTGTCCCGTCACAGCAGT...................................................................................................................................................	21	1	140.00	0.00	24.00	111.00	5.00
..........................................................ACATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	132.00	3.00	24.00	105.00	0.00
..........................................................ATATTGCCCTGTCACAGCAGT...................................................................................................................................................	21	1	128.00	5.00	23.00	93.00	7.00
..........................................................ATATTGTCCTGTCACAGCAAT...................................................................................................................................................	21	1	127.00	1.00	6.00	120.00	0.00
..........................................................ATATTATCCTGTCACAGCAGT...................................................................................................................................................	21	1	124.00	2.00	7.00	111.00	4.00
..........................................................ATATTGTCATGTCACAGCAGTA..................................................................................................................................................	22	1	116.00	0.00	69.00	47.00	0.00
..........................................................ATATTGTCCTGTCATAGCAGT...................................................................................................................................................	21	1	112.00	1.00	21.00	89.00	1.00
..........................................................ATATTGTCCTATCACAGCAGT...................................................................................................................................................	21	1	109.00	2.00	6.00	98.00	3.00
...........................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................	21	1	109.00	1.00	43.00	62.00	3.00
..........................................................ATATTGTCCTGTCACAGAAGTA..................................................................................................................................................	22	1	105.00	0.00	51.00	52.00	2.00
..........................................................ATATCGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	104.00	0.00	17.00	83.00	4.00
..........................................................ATATTGTCCTGTCACAGCCGT...................................................................................................................................................	21	1	103.00	1.00	15.00	87.00	0.00
...........................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................	20	1	102.00	3.00	5.00	89.00	5.00
..........................................................ATATTGTCCTGTAACAGCAGTA..................................................................................................................................................	22	1	102.00	0.00	43.00	51.00	8.00
..........................................................GTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	101.00	1.00	8.00	90.00	2.00
..........................................................ATATTGTCCTGTCAAAGCAGTA..................................................................................................................................................	22	1	101.00	0.00	38.00	62.00	1.00
..........................................................ATATTGTTCTGTCACAGCAGT...................................................................................................................................................	21	1	99.00	0.00	11.00	84.00	4.00
..........................................................ATATTGTCCTGTCACATCAGT...................................................................................................................................................	21	1	98.00	1.00	31.00	65.00	1.00
..........................................................ATATTGTCCTGCCACAGCAGTA..................................................................................................................................................	22	1	96.00	0.00	52.00	44.00	0.00
..........................................................ATCTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	96.00	1.00	26.00	69.00	0.00
..........................................................ATATTGTCCTTTCACAGCAGT...................................................................................................................................................	21	1	93.00	1.00	18.00	36.00	38.00
..........................................................ATATTTTCCTGTCACAGCAGT...................................................................................................................................................	21	1	91.00	2.00	21.00	63.00	5.00
..........................................................ATATTGTCCTGTCACAGTAGT...................................................................................................................................................	21	1	89.00	2.00	18.00	67.00	2.00
............................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................	19	1	87.00	3.00	10.00	74.00	0.00
..........................................................ATATTGTCCTGTCACATCAGTA..................................................................................................................................................	22	1	87.00	0.00	75.00	12.00	0.00
..........................................................ATATTGTCCTGTCACAGCGGT...................................................................................................................................................	21	1	87.00	1.00	9.00	76.00	1.00
..........................................................ATATTGTCCTGTCACCGCAGT...................................................................................................................................................	21	1	86.00	0.00	13.00	73.00	0.00
..........................................................ATATTGTCCTGTCGCAGCAGT...................................................................................................................................................	21	1	86.00	1.00	19.00	61.00	5.00
..........................................................ATATTGTCCTGACACAGCAGT...................................................................................................................................................	21	1	84.00	0.00	4.00	79.00	1.00
..........................................................ATACTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	84.00	0.00	10.00	74.00	0.00
..........................................................ATATTGTACTGTCACAGCAGTA..................................................................................................................................................	22	1	83.00	0.00	33.00	49.00	1.00
..........................................................ATATTGTCCTGTCACACCAGT...................................................................................................................................................	21	1	82.00	1.00	11.00	69.00	1.00
..........................................................ATATTGTCCTTTCACAGCAGTA..................................................................................................................................................	22	1	82.00	0.00	41.00	15.00	26.00
..........................................................ATATTGCCCTGTCACAGCAGTA..................................................................................................................................................	22	1	81.00	0.00	65.00	15.00	1.00
..........................................................ATATTGTCCxxTCACAGCAGT...................................................................................................................................................	19	1	81.00	1.00	11.00	50.00	19.00
..........................................................ATATTGTCCTGTCACGGCAGT...................................................................................................................................................	21	1	81.00	3.00	13.00	61.00	4.00
..........................................................ATATTGTCCTGTTACAGCAGT...................................................................................................................................................	21	1	80.00	3.00	12.00	63.00	2.00
..........................................................ATATTCTCCTGTCACAGCAGT...................................................................................................................................................	21	1	73.00	3.00	7.00	62.00	1.00
..........................................................ATATTGTCTTGTCACAGCAGT...................................................................................................................................................	21	1	64.00	0.00	8.00	54.00	2.00
............................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................	20	1	62.00	0.00	34.00	28.00	0.00
..........................................................ATATTGTCCCGTCACAGCAGTA..................................................................................................................................................	22	1	61.00	0.00	36.00	19.00	6.00
..........................................................ATATTGTCCTGTCACAGCATT...................................................................................................................................................	21	1	60.00	1.00	14.00	45.00	0.00
..........................................................ATATTGTCCTGTCACAGCATTA..................................................................................................................................................	22	1	60.00	0.00	38.00	22.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGCA..................................................................................................................................................	22	1	60.00	0.00	43.00	16.00	1.00
..........................................................ATATTGTCCTGTCACAGCACT...................................................................................................................................................	21	1	59.00	2.00	8.00	49.00	0.00
...............................................................................................................................TTGTTGAGCGTCTGTGGCAACGA--------G...................................................................	24	1	58.00	0.00	1.00	5.00	52.00
..........................................................ATATTGTCCTCTCACAGCAGT...................................................................................................................................................	21	1	58.00	0.00	9.00	46.00	3.00
..........................................................ATATTTTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	58.00	0.00	43.00	15.00	0.00
..........................................................ATATTGTCCTGTCGCAGCAGTA..................................................................................................................................................	22	1	57.00	0.00	39.00	16.00	2.00
..........................................................ACATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	55.00	0.00	38.00	16.00	1.00
..........................................................ATACTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	55.00	0.00	32.00	23.00	0.00
..........................................................ATATCGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	55.00	0.00	30.00	24.00	1.00
..........................................................ATATTGTCCxxTCACAGCAGTA..................................................................................................................................................	20	1	55.00	0.00	26.00	13.00	16.00
..........................................................ATATTGTCCTGTCACGGCAGTA..................................................................................................................................................	22	1	54.00	0.00	41.00	12.00	1.00
..........................................................ATATTGTCCTGTCCCAGCAGT...................................................................................................................................................	21	1	49.00	0.00	3.00	46.00	0.00
.........................................................CATATTGTCCTGTCACAGCAGT...................................................................................................................................................	22	1	49.00	0.00	10.00	39.00	0.00
..........................................................ATGTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	48.00	2.00	8.00	38.00	0.00
.........................................................................................................CTGCTGAGCCGGGGCATTAAC....................................................................................................	21	1	48.00	0.00	33.00	5.00	10.00
..........................................................CTATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	47.00	0.00	8.00	39.00	0.00
..........................................................ATATTGTCCTGTCACACCAGTA..................................................................................................................................................	22	1	47.00	0.00	26.00	21.00	0.00
..........................................................ATATTGTCCTGTAACAGCAG....................................................................................................................................................	20	1	47.00	0.00	1.00	25.00	21.00
................................................................................................................................................................................GATGATGATGATGATGAT................................	18	1	47.00	1.00	41.00	4.00	1.00
..........................................................ATATTGTCCTGTCACAGCGGTA..................................................................................................................................................	22	1	46.00	0.00	23.00	22.00	1.00
..........................................................ATATTGTCCAGTCACAGCAGT...................................................................................................................................................	21	1	46.00	0.00	3.00	43.00	0.00
..........................................................ATATTGTCCTGTCACCGCAGTA..................................................................................................................................................	22	1	45.00	0.00	31.00	14.00	0.00
..........................................................ATATTGTCCTGTxxCAGCAGT...................................................................................................................................................	19	1	45.00	3.00	11.00	31.00	0.00
..........................................................ATATTGTCCTGTCACAGAAG....................................................................................................................................................	20	1	43.00	0.00	0.00	41.00	2.00
..........................................................ATATTATCCTGTCACAGCAGTA..................................................................................................................................................	22	1	42.00	0.00	17.00	24.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................	24	1	41.00	0.00	9.00	32.00	0.00
..........................................................ATATTGTCCTATCACAGCAGTA..................................................................................................................................................	22	1	41.00	0.00	24.00	15.00	2.00
..........................................................ATATTGTCCTGTCACAGCGG....................................................................................................................................................	20	1	41.00	0.00	0.00	7.00	34.00
..........................................................ATATTGTTCTGTCACAGCAGTA..................................................................................................................................................	22	1	40.00	0.00	17.00	23.00	0.00
..........................................................ATATTGTCCTGTCACAACAGTA..................................................................................................................................................	22	1	39.00	0.00	10.00	27.00	2.00
..........................................................GTATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	38.00	0.00	21.00	15.00	2.00
..........................................................ATATTGTCCCGTCACAGCAG....................................................................................................................................................	20	1	36.00	1.00	0.00	19.00	16.00
..........................................................ATATTGTCATGTCACAGCAG....................................................................................................................................................	20	1	36.00	0.00	0.00	34.00	2.00
..........................................................ATATTGTCCTGTCACAGCAATA..................................................................................................................................................	22	1	36.00	0.00	9.00	27.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................	22	1	36.00	0.00	18.00	16.00	2.00

droVir3

TGTGTCTGATTGTGATATATCGTCG-ATC-------------GTTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTACG--TTAAGCA--ATTGGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCAA-------AAAGCCAGAA---------------------------------AAGCCACAAA---------------	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
..........................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	16564.00	1394.00	13430.00	885.00	88.00	767.00
..........................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	5617.00	63.00	2547.00	7.00	305.00	2695.00
..........................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	2365.00	58.00	1128.00	652.00	85.00	442.00
..........................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................	19	1	683.00	3.00	563.00	2.00	4.00	111.00
..........................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................	22	1	538.00	33.00	484.00	8.00	4.00	9.00
..........................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................	21	1	271.00	8.00	168.00	5.00	7.00	83.00
..........................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................	23	1	161.00	3.00	144.00	12.00	0.00	2.00
..........................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................	21	1	151.00	0.00	32.00	3.00	13.00	103.00
..........................................................ATATTGTCCTGTCACAGCCGT...................................................................................................................................................	21	1	100.00	0.00	69.00	24.00	1.00	6.00
..........................................................ATATTGTCCTGTCACAGC......................................................................................................................................................	18	1	100.00	0.00	17.00	0.00	9.00	74.00
..........................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................	21	1	100.00	7.00	92.00	0.00	0.00	1.00
..........................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................	20	1	86.00	0.00	18.00	0.00	5.00	63.00
..........................................................ATATTGACCTGTCACAGCAGT...................................................................................................................................................	21	1	71.00	2.00	67.00	2.00	0.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGT...................................................................................................................................................	21	1	70.00	1.00	61.00	4.00	0.00	4.00
..........................................................ATATTGCCCTGTCACAGCAGT...................................................................................................................................................	21	1	70.00	2.00	63.00	3.00	0.00	2.00
..........................................................ATATTGGCCTGTCACAGCAGT...................................................................................................................................................	21	1	66.00	0.00	64.00	1.00	0.00	1.00
..........................................................ATATTGTCCTGTCACATCAGT...................................................................................................................................................	21	1	61.00	0.00	46.00	15.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCACT...................................................................................................................................................	21	1	60.00	1.00	55.00	4.00	0.00	0.00
...............................................................................................................................TTGTTGAGCGTCGTTAGCAACC.............................................................................	22	1	59.00	0.00	0.00	0.00	0.00	59.00
..........................................................ATATTGTCCTGTCACAGCGGT...................................................................................................................................................	21	1	50.00	2.00	44.00	4.00	0.00	0.00
..........................................................AGATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	44.00	0.00	42.00	2.00	0.00	0.00
...............................................................................................................................TTGTTGAGCGTCGTTAGCAAC..............................................................................	21	1	42.00	0.00	1.00	0.00	1.00	40.00
..........................................................ATATTGTCCTGGCACAGCAGT...................................................................................................................................................	21	1	40.00	0.00	38.00	2.00	0.00	0.00
..........................................................ATATTGTCATGTCACAGCAGT...................................................................................................................................................	21	1	40.00	0.00	39.00	0.00	0.00	1.00
..........................................................ATATTGTCCTGTCACACCAGT...................................................................................................................................................	21	1	39.00	0.00	34.00	5.00	0.00	0.00
..........................................................ATATTGTCCTTTCACAGCAGT...................................................................................................................................................	21	1	36.00	0.00	20.00	9.00	0.00	7.00
..........................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................	22	1	34.00	1.00	25.00	7.00	0.00	1.00
..........................................................ATATTGTCCTGTCACCGCAGT...................................................................................................................................................	21	1	34.00	1.00	27.00	6.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCCG....................................................................................................................................................	20	1	32.00	0.00	15.00	0.00	1.00	16.00
..........................................................ATATTGTCCGGTCACAGCAGT...................................................................................................................................................	21	1	31.00	0.00	30.00	0.00	0.00	1.00
..........................................................ATATTGTCCTGTCACGGCAGT...................................................................................................................................................	21	1	29.00	1.00	24.00	3.00	0.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................	23	1	28.00	0.00	22.00	4.00	0.00	2.00
..........................................................ATATTCTCCTGTCACAGCAGT...................................................................................................................................................	21	1	27.00	1.00	22.00	3.00	0.00	1.00
..........................................................ATATTGTCCTGTCACAGCTGT...................................................................................................................................................	21	1	27.00	0.00	27.00	0.00	0.00	0.00
..........................................................ATATTGTACTGTCACAGCAGT...................................................................................................................................................	21	1	26.00	0.00	25.00	1.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTTT.................................................................................................................................................	23	1	26.00	2.00	22.00	0.00	0.00	2.00
.........................................................................................................CTGCTGAGCCGGGGCATTAACA...................................................................................................	22	1	25.00	0.00	12.00	8.00	0.00	5.00
..........................................................ATATTGTCCTGTCACAGCGG....................................................................................................................................................	20	1	25.00	0.00	6.00	0.00	3.00	16.00
..........................................................ATATTGTCCTGTCCCAGCAGT...................................................................................................................................................	21	1	23.00	1.00	21.00	1.00	0.00	0.00
..........................................................ATATTGTCCTGTCAAAGCAGT...................................................................................................................................................	21	1	22.00	2.00	19.00	1.00	0.00	0.00
..........................................................ATATTGTCTTGTCACAGCAGT...................................................................................................................................................	21	1	21.00	0.00	19.00	2.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCATT...................................................................................................................................................	21	1	21.00	0.00	14.00	7.00	0.00	0.00
..........................................................ATGTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	21.00	0.00	19.00	1.00	0.00	1.00
..........................................................ATATTGTCCTCTCACAGCAGT...................................................................................................................................................	21	1	21.00	0.00	17.00	4.00	0.00	0.00
..........................................................ATATTGTCCTGTAACAGCAGT...................................................................................................................................................	21	1	21.00	0.00	19.00	1.00	0.00	1.00
..........................................................ATATTGTCCTGTCGCAGCAGT...................................................................................................................................................	21	1	20.00	1.00	14.00	4.00	0.00	1.00
..........................................................ATATTGTCCCGTCACAGCAGT...................................................................................................................................................	21	1	20.00	3.00	14.00	2.00	0.00	1.00
..........................................................ATACTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	20.00	2.00	17.00	1.00	0.00	0.00
..........................................................ATATTGTCCTGTTACAGCAGT...................................................................................................................................................	21	1	19.00	1.00	16.00	2.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGAAGT...................................................................................................................................................	21	1	19.00	4.00	14.00	0.00	0.00	1.00
..........................................................GTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	19.00	1.00	14.00	4.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................	22	1	18.00	0.00	7.00	3.00	2.00	6.00
..........................................................ATATTATCCTGTCACAGCAGT...................................................................................................................................................	21	1	18.00	0.00	16.00	2.00	0.00	0.00
..........................................................ATAGTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	17.00	0.00	17.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCCGC...................................................................................................................................................	21	1	17.00	0.00	16.00	1.00	0.00	0.00
..........................................................ATATTGACCTGTCACAGCAG....................................................................................................................................................	20	1	17.00	0.00	17.00	0.00	0.00	0.00
................................................................................TTGTACG--TTAAGCA--ATTGGTA.........................................................................................................................	21	1	16.00	0.00	0.00	16.00	0.00	0.00
..........................................................ATATTGGCCTGTCACAGCAG....................................................................................................................................................	20	1	16.00	0.00	14.00	0.00	0.00	2.00
..........................................................TTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	16.00	1.00	15.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCATAGCAGT...................................................................................................................................................	21	1	16.00	2.00	13.00	1.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................	20	1	15.00	0.00	14.00	0.00	0.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGCA..................................................................................................................................................	22	1	15.00	0.00	12.00	1.00	0.00	2.00
..........................................................ATATTGCCCTGTCACAGCAG....................................................................................................................................................	20	1	15.00	0.00	10.00	0.00	0.00	5.00
.........................................................CATATTGTCCTGTCACAGCAGT...................................................................................................................................................	22	1	15.00	2.00	13.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACATCAGTA..................................................................................................................................................	22	1	14.00	0.00	5.00	9.00	0.00	0.00
..........................................................ACATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	14.00	1.00	12.00	1.00	0.00	0.00
..........................................................ATATTGACCTGTCACAGCAGC...................................................................................................................................................	21	1	14.00	0.00	14.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGTAGT...................................................................................................................................................	21	1	13.00	0.00	13.00	0.00	0.00	0.00
...........................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................	20	1	13.00	1.00	12.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................	20	1	13.00	2.00	10.00	0.00	0.00	1.00
..........................................................ATATTGTCCTGCCACAGCAG....................................................................................................................................................	20	1	13.00	0.00	10.00	0.00	0.00	3.00
..........................................................ATATTGTCCTGTCACATCAG....................................................................................................................................................	20	1	13.00	0.00	11.00	0.00	0.00	2.00
..........................................................ATATTGTCCTGTCGCAGCAG....................................................................................................................................................	20	1	13.00	1.00	6.00	0.00	1.00	5.00
..........................................................ATATTGTCCTGTCACTGCAGT...................................................................................................................................................	21	1	12.00	1.00	10.00	1.00	0.00	0.00
..........................................................ATATTGTCCTGACACAGCAGT...................................................................................................................................................	21	1	11.00	0.00	11.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGTA..................................................................................................................................................	22	1	11.00	0.00	4.00	5.00	0.00	2.00
..........................................................ATATCGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	11.00	1.00	10.00	0.00	0.00	0.00
..........................................................ATCTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	11.00	0.00	11.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCACC...................................................................................................................................................	21	1	11.00	0.00	11.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAACAGT...................................................................................................................................................	21	1	11.00	2.00	8.00	1.00	0.00	0.00
..........................................................AGATTGGCCTGTCACAGCAGT...................................................................................................................................................	21	1	11.00	0.00	11.00	0.00	0.00	0.00
..........................................................ATATTGTCCTTTCACAGCAGTA..................................................................................................................................................	22	1	10.00	0.00	2.00	5.00	1.00	2.00
............................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................	19	1	10.00	2.00	8.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCACTA..................................................................................................................................................	22	1	10.00	0.00	7.00	3.00	0.00	0.00
..........................................................CTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	10.00	0.00	9.00	1.00	0.00	0.00
.....................GTCG-ATC-------------GTTGCGCTTGCCAGTG........................................................................................................................................................................	23	1	10.00	1.00	1.00	1.00	0.00	7.00
..........................................................ATATTGTCCTGTCTCAGCAGT...................................................................................................................................................	21	1	10.00	0.00	9.00	1.00	0.00	0.00
..........................................................ATATTGTCCTGTCACATCACT...................................................................................................................................................	21	1	10.00	0.00	8.00	2.00	0.00	0.00
..........................................................ATATTCTCCTGTCACAGCAG....................................................................................................................................................	20	1	10.00	0.00	9.00	0.00	0.00	1.00
..........................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................	19	1	10.00	0.00	5.00	0.00	2.00	3.00
..........................................................ATATTGTCCTGTCACAGCATTA..................................................................................................................................................	22	1	10.00	0.00	5.00	5.00	0.00	0.00
..........................................................ATATTTTCCTGTCACAGCAGT...................................................................................................................................................	21	1	10.00	0.00	4.00	6.00	0.00	0.00
..........................................................ATATTGACCTGTCACAGCACT...................................................................................................................................................	21	1	10.00	0.00	10.00	0.00	0.00	0.00
..........................................................AGATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	9.00	0.00	9.00	0.00	0.00	0.00
..........................................................ATATGGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	9.00	0.00	8.00	1.00	0.00	0.00
..........................................................ATATTGTCCCGTCACAGCAG....................................................................................................................................................	20	1	9.00	0.00	4.00	0.00	0.00	5.00
..........................................................ATATTGTCCTGTCACATCAGC...................................................................................................................................................	21	1	9.00	0.00	9.00	0.00	0.00	0.00
..........................................................ATAGTGTCCTGTCACAGCAGC...................................................................................................................................................	21	1	9.00	0.00	8.00	1.00	0.00	0.00
..........................................................ATATTGCCCTGTCACAGCAGC...................................................................................................................................................	21	1	9.00	0.00	9.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACACCAG....................................................................................................................................................	20	1	8.00	0.00	8.00	0.00	0.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGGA..................................................................................................................................................	22	1	8.00	1.00	3.00	4.00	0.00	0.00

droMoj3

TCAAT-----------------------CAACGCGTCTATTAT-AGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTAAA--TTAAGCA--ATTGGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCA--------GAAGAAATCT---------------------------------AA-----------------------	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
..........................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	50528.00	3490.00	26365.00	19243.00	1430.00
..........................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	10704.00	144.00	1732.00	1371.00	7457.00
..........................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	6613.00	103.00	3479.00	3012.00	19.00
..........................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................	22	1	3134.00	123.00	1746.00	1217.00	48.00
..........................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................	19	1	1265.00	10.00	731.00	520.00	4.00
..........................................................ATATTGTCCTGTCACAGCCGT...................................................................................................................................................	21	1	684.00	0.00	84.00	584.00	16.00
..........................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................	23	1	473.00	14.00	240.00	160.00	59.00
..........................................................ATATTGTCCTGTCACCGCAGT...................................................................................................................................................	21	1	340.00	1.00	79.00	254.00	6.00
..........................................................ATATTGTCCTGTCACATCAGT...................................................................................................................................................	21	1	255.00	3.00	109.00	142.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................	21	1	206.00	2.00	151.00	47.00	6.00
..........................................................ATATTGGCCTGTCACAGCAGT...................................................................................................................................................	21	1	168.00	0.00	111.00	52.00	5.00
..........................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................	21	1	159.00	2.00	80.00	77.00	0.00
..........................................................ATATTGTCCTGGCACAGCAGT...................................................................................................................................................	21	1	145.00	0.00	81.00	59.00	5.00
..........................................................ATATTGCCCTGTCACAGCAGT...................................................................................................................................................	21	1	140.00	5.00	86.00	46.00	3.00
..........................................................ATATTGTCCTGTCACAGCATT...................................................................................................................................................	21	1	140.00	2.00	76.00	60.00	2.00
..........................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................	23	1	139.00	2.00	71.00	56.00	10.00
..........................................................ATATTGTCCTGTCACAGCAGTTT.................................................................................................................................................	23	1	133.00	2.00	72.00	59.00	0.00
.........................................................................................................CTGCTGAGCCGGGGCATTAACA...................................................................................................	22	1	131.00	2.00	17.00	13.00	99.00
..........................................................ATATTGTCCTGTCACAGCCG....................................................................................................................................................	20	1	127.00	0.00	11.00	116.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................	21	1	126.00	1.00	77.00	45.00	3.00
..........................................................ATATTGTCCTGCCACAGCAGT...................................................................................................................................................	21	1	124.00	2.00	68.00	53.00	1.00
..........................................................ATATTGTCCTGTCCCAGCAGT...................................................................................................................................................	21	1	123.00	0.00	39.00	83.00	1.00
..........................................................ATATTGTCCTGTCACAGCGGT...................................................................................................................................................	21	1	118.00	4.00	70.00	41.00	3.00
..........................................................ATATTGTCCTGTCACAGCCGTA..................................................................................................................................................	22	1	110.00	0.00	5.00	40.00	65.00
..........................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................	22	1	97.00	0.00	37.00	39.00	21.00
..........................................................ATATTGTCCTTTCACAGCAGT...................................................................................................................................................	21	1	91.00	3.00	22.00	66.00	0.00
..........................................................ATATTGTCCTGTCACACCAGT...................................................................................................................................................	21	1	91.00	0.00	63.00	24.00	4.00
..........................................................ATACTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	86.00	3.00	52.00	31.00	0.00
..........................................................ATATTGTCCTGTTACAGCAGT...................................................................................................................................................	21	1	86.00	3.00	38.00	42.00	3.00
..........................................................ATATTGTCCTGTCACCGCCGT...................................................................................................................................................	21	1	81.00	0.00	4.00	77.00	0.00
..........................................................ATATTGTCCTGTCGCAGCAGT...................................................................................................................................................	21	1	75.00	2.00	45.00	27.00	1.00
..........................................................ATATTGTCCCGTCACAGCAGT...................................................................................................................................................	21	1	72.00	1.00	43.00	26.00	2.00
..........................................................ATATTGTCCTGTCACAGCACT...................................................................................................................................................	21	1	70.00	0.00	33.00	35.00	2.00
..........................................................AGATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	70.00	0.00	37.00	33.00	0.00
..........................................................ATATTATCCTGTCACAGCAGT...................................................................................................................................................	21	1	69.00	0.00	29.00	37.00	3.00
..........................................................ATATCGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	69.00	2.00	44.00	22.00	1.00
..........................................................ATATTGTCCTGTCAAAGCAGT...................................................................................................................................................	21	1	69.00	0.00	48.00	19.00	2.00
..........................................................ATATTGTACTGTCACAGCAGT...................................................................................................................................................	21	1	65.00	3.00	39.00	21.00	2.00
..........................................................ATATTGACCTGTCACAGCAGT...................................................................................................................................................	21	1	64.00	2.00	48.00	14.00	0.00
..........................................................ATATTGTCCTGTCACAGCTGT...................................................................................................................................................	21	1	63.00	0.00	42.00	21.00	0.00
..........................................................ATATTGTCCTGTCACGGCAGT...................................................................................................................................................	21	1	62.00	2.00	36.00	21.00	3.00
..........................................................ATGTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	60.00	2.00	34.00	24.00	0.00
..........................................................ATATTGTCTTGTCACAGCAGT...................................................................................................................................................	21	1	58.00	0.00	32.00	22.00	4.00
..........................................................ATATTCTCCTGTCACAGCAGT...................................................................................................................................................	21	1	57.00	1.00	30.00	25.00	1.00
..........................................................GTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	56.00	4.00	26.00	25.00	1.00
..........................................................ATATTGTCCTCTCACAGCAGT...................................................................................................................................................	21	1	55.00	0.00	24.00	30.00	1.00
..........................................................ATATTGTCCTGTCACCGCAG....................................................................................................................................................	20	1	55.00	0.00	8.00	47.00	0.00
..........................................................ACATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	54.00	4.00	26.00	23.00	1.00
..........................................................ATATTGTCCTGTCACAACAGT...................................................................................................................................................	21	1	53.00	2.00	23.00	27.00	1.00
..........................................................ATATTGTCATGTCACAGCAGT...................................................................................................................................................	21	1	53.00	1.00	31.00	15.00	6.00
..........................................................ATATTGTCCTGTCACAGAAGT...................................................................................................................................................	21	1	52.00	0.00	41.00	8.00	3.00
..........................................................ATATTGTCCTGTCACAGCCGTT..................................................................................................................................................	22	1	49.00	0.00	8.00	38.00	3.00
..........................................................ATATTGTCCTGTCATAGCAGT...................................................................................................................................................	21	1	48.00	0.00	34.00	13.00	1.00
..........................................................ATATTGTCCTGTAACAGCAGT...................................................................................................................................................	21	1	48.00	1.00	19.00	25.00	3.00
..........................................................ATATTGTCCTGTCACATCAG....................................................................................................................................................	20	1	45.00	0.00	20.00	25.00	0.00
..........................................................ATAGTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	45.00	0.00	32.00	13.00	0.00
..........................................................ATATTGTCCTGTCACCGCAGTA..................................................................................................................................................	22	1	45.00	0.00	4.00	19.00	22.00
..........................................................ATATTGTCCTGTCACAGTAGT...................................................................................................................................................	21	1	44.00	1.00	29.00	13.00	1.00
..........................................................ATATTGTCCTATCACAGCAGT...................................................................................................................................................	21	1	44.00	2.00	24.00	18.00	0.00
..........................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................	20	1	41.00	0.00	20.00	21.00	0.00
.........................................................CATATTGTCCTGTCACAGCAGT...................................................................................................................................................	22	1	41.00	1.00	23.00	15.00	2.00
..........................................................ATCTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	40.00	3.00	23.00	13.00	1.00
..........................................................ATATTGTCCGGTCACAGCAGT...................................................................................................................................................	21	1	39.00	0.00	30.00	9.00	0.00
..........................................................TTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	38.00	0.00	27.00	10.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGCA..................................................................................................................................................	22	1	36.00	0.00	4.00	5.00	27.00
..........................................................ATATTGTCATGTCACAGCAGTA..................................................................................................................................................	22	1	34.00	0.00	4.00	1.00	29.00
..........................................................ATATTGTTCTGTCACAGCAGT...................................................................................................................................................	21	1	32.00	1.00	18.00	13.00	0.00
..........................................................ATATTGGCCTGTCACAGCAG....................................................................................................................................................	20	1	32.00	0.00	21.00	11.00	0.00
..........................................................ATATTTTCCTGTCACAGCAGT...................................................................................................................................................	21	1	30.00	5.00	10.00	15.00	0.00
..........................................................ATATTGTCCTGCCACAGCAGTA..................................................................................................................................................	22	1	28.00	0.00	5.00	5.00	18.00
..........................................................ATATTGTCCTGTCACTGCAGT...................................................................................................................................................	21	1	28.00	1.00	14.00	11.00	2.00
..........................................................ATATTGGCCTGTCACAGCAGTA..................................................................................................................................................	22	1	27.00	0.00	2.00	4.00	21.00
..........................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................	22	1	26.00	0.00	11.00	7.00	8.00
..........................................................ATATTGTCCTGTCACAGCAGTGT.................................................................................................................................................	23	1	26.00	0.00	15.00	11.00	0.00
..........................................................ATATTGTCCTGTCCCAGCCGT...................................................................................................................................................	21	1	25.00	0.00	2.00	22.00	1.00
..........................................................ATATTGTCCTGTCCCAGCAG....................................................................................................................................................	20	1	25.00	0.00	6.00	19.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGGA..................................................................................................................................................	22	1	25.00	0.00	2.00	6.00	17.00
..........................................................CTATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	24.00	1.00	10.00	13.00	0.00
..........................................................ATATTGTCCTGTCACAGCGGTA..................................................................................................................................................	22	1	24.00	1.00	6.00	4.00	13.00
..........................................................ATATTGTCCTGTCACATCAGTA..................................................................................................................................................	22	1	24.00	0.00	3.00	10.00	11.00
..........................................................ATATGGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	24.00	0.00	16.00	7.00	1.00
..........................................................ATATTGCCCTGTCACAGCAGTA..................................................................................................................................................	22	1	23.00	0.00	3.00	4.00	16.00
..........................................................ATATTGTCCTGTCACCGCAGTT..................................................................................................................................................	22	1	23.00	0.00	6.00	17.00	0.00
..........................................................ATATTGTCCTGTCACAGC......................................................................................................................................................	18	1	23.00	0.00	12.00	11.00	0.00
..........................................................ATATTGTCCTGGCACAGCAGTA..................................................................................................................................................	22	1	23.00	0.00	6.00	4.00	13.00
..........................................................ATATTGTCCTGTCACATCAGTT..................................................................................................................................................	22	1	23.00	1.00	4.00	16.00	2.00
..........................................................ATATTGTCCTGTCTCAGCAGT...................................................................................................................................................	21	1	22.00	1.00	14.00	6.00	1.00
..........................................................ATATTGTCCTGACACAGCAGT...................................................................................................................................................	21	1	22.00	2.00	17.00	3.00	0.00
..........................................................ATATTGGCCTGTCACAGCAGG...................................................................................................................................................	21	1	21.00	0.00	7.00	14.00	0.00
..........................................................ATATTGTCCTGTCCCAGCAGTA..................................................................................................................................................	22	1	21.00	0.00	2.00	7.00	12.00
..........................................................ATATTGTCCTGTCACAGCAAT...................................................................................................................................................	21	1	21.00	1.00	9.00	10.00	1.00
..........................................................ATATTGTCCTGCCACAGCAG....................................................................................................................................................	20	1	20.00	1.00	6.00	13.00	0.00
..........................................................ATATTGTCCTGTCACACCAG....................................................................................................................................................	20	1	20.00	0.00	11.00	9.00	0.00
..........................................................ATATTGTCCTGTTACAGCAGTA..................................................................................................................................................	22	1	20.00	1.00	2.00	5.00	12.00
..........................................................ATATTGTCCTTTCACAGCAG....................................................................................................................................................	20	1	20.00	0.00	1.00	19.00	0.00
..........................................................ATATTGTGCTGTCACAGCAGT...................................................................................................................................................	21	1	20.00	0.00	13.00	7.00	0.00
..........................................................ATATTGTCCTGTTACATCAGT...................................................................................................................................................	21	1	19.00	0.00	2.00	17.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................	22	1	19.00	0.00	7.00	3.00	9.00
..........................................................ATATTGTCCTGTCACATCATT...................................................................................................................................................	21	1	19.00	0.00	8.00	11.00	0.00
..........................................................ATATTGTCCTGTCACAGGAGT...................................................................................................................................................	21	1	19.00	1.00	10.00	8.00	0.00
..........................................................ATATTGTCCTGTCACAGCAGTTG.................................................................................................................................................	23	1	19.00	1.00	13.00	5.00	0.00

droGri2

TtTtT--TTt----------------tTC-------------GTTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTTAA--TTAAGCA--ATTGGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTTGCTAGCAACTAAAAAGCGAGCAGCG----------------------------------AGCAG-CGAGA--------A--------	Size	Hit Count	Total Norm	V109 Male body
..........................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	360.00	360.00
..........................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................	22	1	11.00	11.00
..........................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................	20	1	4.00	4.00
..........................................................ATATTGTCCTGTCACAGAAGT...................................................................................................................................................	21	1	4.00	4.00
..........................................................ATATTGTCCTATCACAGCAGT...................................................................................................................................................	21	1	3.00	3.00
..........................................................ATATTGTCCTGTCACAGTAGT...................................................................................................................................................	21	1	2.00	2.00
..........................................................ATATTCTCCTGTCACAGCAGT...................................................................................................................................................	21	1	2.00	2.00
..........................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................	23	1	2.00	2.00
..........................................................ATATTGTCCTGCCACAGCAGT...................................................................................................................................................	21	1	2.00	2.00
..........................................................ATATTGTCCTGTCACAGAAGTA..................................................................................................................................................	22	1	1.00	1.00
..........................................................ATATTGTCCTxTCACAGCAGT...................................................................................................................................................	20	1	1.00	1.00
..........................................................ATTTTGTCCTGTCACAGCAGT...................................................................................................................................................	21	1	1.00	1.00
..........................................................ATATTGTCTTGTCACAGCAGT...................................................................................................................................................	21	1	1.00	1.00
.......................................................................................................................................................ACAGCGAGCAGCG----------------------------------AGCAG-CGAGA--------.........	23	1	1.00	1.00
..........................................................ATATTGTCGTGTCACAGCAG....................................................................................................................................................	20	1	1.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................	21	1	1.00	1.00
..........................................................ATATTGTCCTGTAACAGCAGT...................................................................................................................................................	21	1	1.00	1.00
..........................................................ATATTGTCCCGTCACAGCAGT...................................................................................................................................................	21	1	1.00	1.00
..........................................................ATATTGTCCTGTCATAGCAGT...................................................................................................................................................	21	1	1.00	1.00
..........................................................ATATTGCCCTGTCACAGCAGT...................................................................................................................................................	21	1	1.00	1.00
..........................................................ATATTGTCCTGTCACAGCTA....................................................................................................................................................	20	1	1.00	1.00
.........................................................................................................CTGCTGAGCCGGGGCATTAACA...................................................................................................	22	1	1.00	1.00
..........................................................ATATTGTCCTGTCACAACAGT...................................................................................................................................................	21	1	1.00	1.00
..........................................................ATATTGACCTGTCACAGCAGT...................................................................................................................................................	21	1	1.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................	21	1	1.00	1.00
..........................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................	22	1	1.00	1.00

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image