Possible Orthologs for dme-mir-1000

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3R:21243636-21243765 -	96.95	TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG TATACCGTGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTTACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .............................ATATTGTCCTGTCACAGCAG................................................................................. 20 1 18445.00 20.00 17787.00 335.00 303.00 .............................ATATTGTCCTGTCACAGCAGTA............................................................................... 22 1 8976.00 4519.00 2880.00 59.00 1518.00 .............................ATATTGTCCTGTCACAGCAGT................................................................................ 21 1 6141.00 1421.00 4390.00 106.00 224.00 .............................ATATTGTCCTGTCACAGCA.................................................................................. 19 1 503.00 0.00 495.00 6.00 2.00 .............................ATATTGTCCTGTCACAGC................................................................................... 18 1 487.00 1.00 471.00 9.00 6.00 .............................ATATTGTCCTGTCACAGCAGC................................................................................ 21 1 487.00 0.00 458.00 10.00 19.00 .............................ATATTGTCCTGTCACAGCAGG................................................................................ 21 1 444.00 5.00 388.00 16.00 35.00 .............................ATATTGTCCTGTCACAGCAC................................................................................. 20 1 359.00 0.00 352.00 2.00 5.00 ..........................................................................CTGCTGGGTCGGGGCATTAACA.................................. 22 1 173.00 82.00 17.00 0.00 74.00 .............................ATATTGTCCTGTCACAGCGG................................................................................. 20 1 93.00 0.00 84.00 6.00 3.00 ..........................................................................CTGCTGGGTCGGGGCATTAAC................................... 21 1 93.00 18.00 13.00 1.00 61.00 .............................ATATTGTCCTGTCACAGCAGTT............................................................................... 22 1 88.00 15.00 69.00 2.00 2.00 .............................ATATTGTCCTGTCACAGCAGTAA.............................................................................. 23 1 73.00 54.00 19.00 0.00 0.00 .............................ATATTGTCCTGTCACAGCCGTA............................................................................... 22 1 35.00 35.00 0.00 0.00 0.00 .............................ATATTGTCCTGTCACAGCAGGA............................................................................... 22 1 31.00 20.00 4.00 0.00 7.00 .............................ATATTGCCCTGTCACAGCAG................................................................................. 20 1 28.00 0.00 27.00 0.00 1.00 .............................ATATTGTCCTGTCACAGCAGTG............................................................................... 22 1 28.00 6.00 19.00 0.00 3.00 .............................ATATTGTCCTGCCACAGCAG................................................................................. 20 1 28.00 0.00 27.00 0.00 1.00 .............................ATATTTTCCTGTCACAGCAG................................................................................. 20 1 24.00 0.00 22.00 1.00 1.00 .............................ATATTGTCCTTTCACAGCAGTA............................................................................... 22 1 22.00 3.00 9.00 0.00 10.00 .............................ATATTGTCCTGTCACGGCAG................................................................................. 20 1 22.00 0.00 22.00 0.00 0.00 .............................ATATTGTCCCGTCACAGCAG................................................................................. 20 1 21.00 0.00 21.00 0.00 0.00 .............................ATATTGTCCTTTCACAGCAG................................................................................. 20 1 21.00 0.00 18.00 0.00 3.00 .............................ATATTGTCCTGTCACAGCCGT................................................................................ 21 1 20.00 20.00 0.00 0.00 0.00 .............................ATATTGTCCTGTCACAGCT.................................................................................. 19 1 19.00 0.00 19.00 0.00 0.00 .............................ATATTGTCCTGTCACCGCAGTA............................................................................... 22 1 19.00 18.00 1.00 0.00 0.00 .............................ATATTGTCATGTCACAGCAGTA............................................................................... 22 1 19.00 18.00 1.00 0.00 0.00 .............................ATATTGTCCTGTCACAGCAGTC............................................................................... 22 1 19.00 9.00 9.00 1.00 0.00 ..........................................................................CTGCTGGGTCGGGGCATT...................................... 18 1 18.00 0.00 12.00 2.00 4.00 ..............................TATTGTCCTGTCACAGCAG................................................................................. 19 1 18.00 0.00 17.00 1.00 0.00 .............................ATATTGGCCTGTCACAGCAGTA............................................................................... 22 1 17.00 16.00 1.00 0.00 0.00 .............................ATATTGTCCTGTCACAGCAGTAT.............................................................................. 23 1 17.00 2.00 13.00 2.00 0.00 .............................ATATTGTCCTGTCACAGCAGA................................................................................ 21 1 16.00 2.00 13.00 1.00 0.00 .............................ATATTGTCCTGGCACAGCAG................................................................................. 20 1 16.00 0.00 16.00 0.00 0.00 .............................ATATTGGCCTGTCACAGCAGT................................................................................ 21 1 16.00 11.00 5.00 0.00 0.00 .............................ATATTGTCCxxTCACAGCAG................................................................................. 18 1 16.00 0.00 16.00 0.00 0.00 .............................ATATTGTCCTGTCGCAGCAG................................................................................. 20 1 16.00 0.00 16.00 0.00 0.00 .............................ATATTGTACTGTCACAGCAGTA............................................................................... 22 1 14.00 14.00 0.00 0.00 0.00 .............................ATATTGTCCTGTCACAGCG.................................................................................. 19 1 13.00 0.00 13.00 0.00 0.00 .............................ATATTGTCCxxTCACAGCAGT................................................................................ 19 1 13.00 0.00 13.00 0.00 0.00 .............................ATATTCTCCTGTCACAGCAG................................................................................. 20 1 12.00 0.00 11.00 0.00 1.00 .............................ATATTGTCCTGTCGCAGCAGTA............................................................................... 22 1 12.00 6.00 4.00 0.00 2.00 .............................ATATTGTCCxxTCACAGCAGTA............................................................................... 20 1 12.00 0.00 8.00 0.00 4.00 .............................ATATTGTCCTGCCACAGCAGTA............................................................................... 22 1 12.00 4.00 4.00 0.00 4.00 .............................ATATTGTCCTTTCACAGCAGT................................................................................ 21 1 12.00 0.00 12.00 0.00 0.00 .............................ATATTGTCCTGGCACAGCAGTA............................................................................... 22 1 12.00 8.00 4.00 0.00 0.00 .............................ATATTGTCCTGTCACATCAG................................................................................. 20 1 11.00 0.00 11.00 0.00 0.00 .............................ATATTGTCCCGTCACAGCAGTA............................................................................... 22 1 11.00 5.00 6.00 0.00 0.00 .............................ATATTGCCCTGTCACAGCAGTA............................................................................... 22 1 11.00 6.00 1.00 0.00 4.00 ................................................................................................TTGTTGAGCGTCATTAGCAAC............. 21 1 11.00 0.00 8.00 0.00 3.00 ................................................................................................TTGTTGAGCGTCATTAGC................ 18 1 11.00 0.00 8.00 0.00 3.00 .............................ATATTGTCCTGTCACGGCAGTA............................................................................... 22 1 11.00 7.00 2.00 0.00 2.00 .............................ATATTGGCCTGTCACAGCAG................................................................................. 20 1 11.00 0.00 11.00 0.00 0.00 .............................ATATCGTCCTGTCACAGCAG................................................................................. 20 1 10.00 0.00 10.00 0.00 0.00 .............................ATATTGTCCTGTCACAGCAGCA............................................................................... 22 1 10.00 7.00 2.00 0.00 1.00 .............................ATATTGTCCTGTCATAGCAGTA............................................................................... 22 1 10.00 8.00 1.00 0.00 1.00 .............................ATATTGCCCTGTCACAGCAGT................................................................................ 21 1 10.00 1.00 8.00 0.00 1.00 ..............................TATTGTCCTGTCACAGCAGTA............................................................................... 21 1 9.00 4.00 3.00 0.00 2.00 .............................ATATTGTCCTGTCACAGCAA................................................................................. 20 1 9.00 0.00 8.00 0.00 1.00 .............................ATATTGTCTTGTCACAGCAG................................................................................. 20 1 9.00 0.00 9.00 0.00 0.00 .............................GTATTGTCCTGTCACAGCAG................................................................................. 20 1 9.00 0.00 9.00 0.00 0.00 .............................ATATTGTCCCGTCACAGCAGT................................................................................ 21 1 9.00 2.00 7.00 0.00 0.00 .............................ATATTGTCCTxTCACAGCAGTA............................................................................... 21 1 9.00 0.00 6.00 0.00 3.00 .............................ATATTGTCCTGTTACAGCAG................................................................................. 20 1 8.00 0.00 8.00 0.00 0.00 .............................ATATTGTCCTGTTACAGCAGTA............................................................................... 22 1 8.00 7.00 0.00 0.00 1.00 .............................ATATTATCCTGTCACAGCAG................................................................................. 20 1 8.00 0.00 8.00 0.00 0.00 .............................ATATTGTCCTGTCACAGCGGT................................................................................ 21 1 8.00 5.00 3.00 0.00 0.00 .............................ATATTGTCCTGTCACATCAGTA............................................................................... 22 1 8.00 6.00 2.00 0.00 0.00 .............................ATATTGTCCTCTCACAGCAGTA............................................................................... 22 1 8.00 4.00 1.00 0.00 3.00 .............................ATATTGTCCTGTCACAGCTT................................................................................. 20 1 8.00 0.00 8.00 0.00 0.00 .............................ATATTGTCCTGGCACAGCAGT................................................................................ 21 1 8.00 5.00 2.00 0.00 1.00 .............................ATATTGTCCTGTCGCAGCAGT................................................................................ 21 1 8.00 4.00 4.00 0.00 0.00 .............................ATATTGTCCTATCACAGCAG................................................................................. 20 1 8.00 0.00 8.00 0.00 0.00 .............................ATATTGTCCTGCCACAGCAGT................................................................................ 21 1 8.00 3.00 4.00 0.00 1.00 .............................ATATTGTCCTGTCCCAGCAGTA............................................................................... 22 1 7.00 7.00 0.00 0.00 0.00 .............................ATATTGTTCTGTCACAGCAGTA............................................................................... 22 1 7.00 5.00 2.00 0.00 0.00 .............................ATATTGTCCTGTCACAGTAGTA............................................................................... 22 1 7.00 5.00 2.00 0.00 0.00 ...............................ATTGTCCTGTCACAGCAG................................................................................. 18 1 7.00 0.00 7.00 0.00 0.00 .............................GTATTGTCCTGTCACAGCAGTA............................................................................... 22 1 7.00 4.00 1.00 0.00 2.00 .............................ACATTGTCCTGTCACAGCAG................................................................................. 20 1 7.00 0.00 7.00 0.00 0.00 .............................ATAGTGTCCTGTCACAGCAGTA............................................................................... 22 1 7.00 6.00 1.00 0.00 0.00 .............................ATATTGTCCTGTCACAGCATTA............................................................................... 22 1 7.00 7.00 0.00 0.00 0.00 .............................ATATTGTCCTCTCACAGCAG................................................................................. 20 1 7.00 0.00 7.00 0.00 0.00 .............................ATATTGTCCTGTCACAGCTGTA............................................................................... 22 1 7.00 7.00 0.00 0.00 0.00 .............................ATATTGTCCTxTCACAGCAGT................................................................................ 20 1 7.00 0.00 5.00 1.00 1.00 .............................ATATTGTCCTGTCATAGCAG................................................................................. 20 1 6.00 0.00 6.00 0.00 0.00 .............................ATATTGTCCTGTCACACCAG................................................................................. 20 1 6.00 0.00 6.00 0.00 0.00 .............................ATATTGTCATGTCACAGCAGT................................................................................ 21 1 6.00 5.00 1.00 0.00 0.00 ..........................................................................CTGCTGGGTCGGGGCATTAA.................................... 20 1 6.00 0.00 0.00 1.00 5.00 .............................ATATTGTCCTGACACAGCAGTA............................................................................... 22 1 6.00 0.00 2.00 0.00 4.00 .............................ATATTGTCCTGTCACGGCAGT................................................................................ 21 1 6.00 0.00 6.00 0.00 0.00 .............................ATATTGTCCTGACACAGCAG................................................................................. 20 1 6.00 0.00 4.00 2.00 0.00 .............................ATATTGGACTGTCACAGCAGTA............................................................................... 22 1 5.00 5.00 0.00 0.00 0.00 .............................ATATTGTCCTGTAACAGCAGTA............................................................................... 22 1 5.00 4.00 1.00 0.00 0.00 .............................ATGTTGTCCTGTCACAGCAGTA............................................................................... 22 1 5.00 4.00 0.00 0.00 1.00 .............................ATATTGTCCTGTCACCGCAGT................................................................................ 21 1 5.00 5.00 0.00 0.00 0.00 .............................TTATTGTCCTGTCACAGCAG................................................................................. 20 1 5.00 0.00 5.00 0.00 0.00 .............................TTATTGTCCTGTCACAGCAGTA............................................................................... 22 1 5.00 5.00 0.00 0.00 0.00 .............................ATATTGTCCTGTCAAAGCAG................................................................................. 20 1 5.00 0.00 5.00 0.00 0.00 .............................ATATTGTCCTATCACAGCAGTA............................................................................... 22 1 5.00 5.00 0.00 0.00 0.00 .............................ATATTGTCCTGTCATAGCAGT................................................................................ 21 1 5.00 2.00 3.00 0.00 0.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_13:202504-202633 -	98.46	TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .............................ATATTGTCCTGTCACAGCAGT................................................................................ 21 1 44506.00 4696.00 6045.00 33765.00 .............................ATATTGTCCTGTCACAGCAGTA............................................................................... 22 1 9644.00 136.00 5906.00 3602.00 .............................ATATTGTCCTGTCACAGCAG................................................................................. 20 1 5628.00 204.00 75.00 5349.00 .............................ATATTGTCCTGTCACAGCA.................................................................................. 19 1 3149.00 0.00 19.00 3130.00 .............................ATATTGTCCTGTCACAGCAGTT............................................................................... 22 1 1875.00 77.00 19.00 1779.00 .............................ATATTGTCCTGTCACAGCAGTAA.............................................................................. 23 1 449.00 15.00 97.00 337.00 .............................ATATTGTCCTGTCACAGCAGA................................................................................ 21 1 397.00 12.00 1.00 384.00 ..............................TATTGTCCTGTCACAGCAGT................................................................................ 20 1 316.00 29.00 34.00 253.00 ..........................................................................CTGCTGGGTCGGGGCATTAACA.................................. 22 1 179.00 6.00 159.00 14.00 ..............................TATTGTCCTGTCACAGCAGTA............................................................................... 21 1 169.00 8.00 50.00 111.00 .............................ATATTGTCCTGTCACAGCAGC................................................................................ 21 1 83.00 5.00 8.00 70.00 .............................ACATTGTCCTGTCACAGCAGT................................................................................ 21 1 72.00 7.00 21.00 44.00 .............................ATATTGTCCTGTCACAGCCGT................................................................................ 21 1 72.00 43.00 3.00 26.00 .............................ATATTGTCCTGTCACAGCGGT................................................................................ 21 1 71.00 28.00 15.00 28.00 .............................ATATTGTCCCGTCACAGCAGT................................................................................ 21 1 63.00 5.00 16.00 42.00 .............................ATATTGTCCTGTCACGGCAGT................................................................................ 21 1 55.00 5.00 12.00 38.00 ...............................ATTGTCCTGTCACAGCAGT................................................................................ 19 1 52.00 1.00 24.00 27.00 .............................ATATTGACCTGTCACAGCAGT................................................................................ 21 1 51.00 1.00 1.00 49.00 .............................ATATTTTCCTGTCACAGCAGT................................................................................ 21 1 51.00 4.00 10.00 37.00 .............................ATATTGTCCTGCCACAGCAGT................................................................................ 21 1 51.00 5.00 7.00 39.00 .............................ATATTGCCCTGTCACAGCAGT................................................................................ 21 1 51.00 10.00 8.00 33.00 .............................ATATTGTTCTGTCACAGCAGTA............................................................................... 22 1 50.00 0.00 48.00 2.00 .............................ATATTGTACTGTCACAGCAGT................................................................................ 21 1 50.00 2.00 0.00 48.00 ............................CATATTGTCCTGTCACAGCAGT................................................................................ 22 1 48.00 1.00 1.00 46.00 .............................ATATTGTCCTGTCGCAGCAGT................................................................................ 21 1 47.00 5.00 10.00 32.00 .............................ATATTATCCTGTCACAGCAGT................................................................................ 21 1 47.00 3.00 5.00 39.00 .............................ATATTGTCCTGTCACCGCAGT................................................................................ 21 1 46.00 2.00 9.00 35.00 .............................ACATTGTCCTGTCACAGCAGTA............................................................................... 22 1 45.00 0.00 40.00 5.00 ...............................ATTGTCCTGTCACAGCAGTA............................................................................... 20 1 44.00 1.00 35.00 8.00 .............................ATATTGTCCTGTCATAGCAGT................................................................................ 21 1 43.00 5.00 12.00 26.00 .............................GTATTGTCCTGTCACAGCAGT................................................................................ 21 1 42.00 2.00 13.00 27.00 .............................ATATTGTCCTGTCACAGCAGTAT.............................................................................. 23 1 40.00 0.00 8.00 32.00 .............................ATACTGTCCTGTCACAGCAGT................................................................................ 21 1 38.00 3.00 7.00 28.00 .............................ATATTGTCATGTCACAGCAGT................................................................................ 21 1 38.00 3.00 3.00 32.00 .............................ATATTGTCCTGTCACAGCAAT................................................................................ 21 1 37.00 0.00 3.00 34.00 .............................ATATTGTCCTGTTACAGCAGT................................................................................ 21 1 37.00 1.00 20.00 16.00 .............................ATATTGTCCTGTCATAGCAGTA............................................................................... 22 1 37.00 0.00 30.00 7.00 .............................ATATTGTCCxxTCACAGCAGT................................................................................ 19 1 36.00 3.00 5.00 28.00 .............................ATATTGTCCTGTCACAGCAGTC............................................................................... 22 1 36.00 7.00 5.00 24.00 .............................ATATTGTCCTGTCACAGCTGT................................................................................ 21 1 35.00 30.00 1.00 4.00 .............................ATATTGTTCTGTCACAGCAGT................................................................................ 21 1 35.00 3.00 18.00 14.00 .............................ATATTGTCCTGTCACAGAAGT................................................................................ 21 1 32.00 1.00 1.00 30.00 .............................ATATTGTCCTGTCACAGC................................................................................... 18 1 32.00 0.00 1.00 31.00 .............................ATCTTGTCCTGTCACAGCAGT................................................................................ 21 1 31.00 9.00 5.00 17.00 .............................ATATCGTCCTGTCACAGCAGT................................................................................ 21 1 31.00 5.00 9.00 17.00 .............................ATATTCTCCTGTCACAGCAGT................................................................................ 21 1 30.00 1.00 7.00 22.00 .............................ATATTGTCCTGTCACATCAGT................................................................................ 21 1 30.00 2.00 3.00 25.00 ..............................TATTGTCCTGTCACAGCAGTT............................................................................... 21 1 28.00 0.00 0.00 28.00 .............................AAATTGTCCTGTCACAGCAGT................................................................................ 21 1 28.00 0.00 0.00 28.00 .............................ATATTGTCCTGTCACACCAGT................................................................................ 21 1 28.00 3.00 5.00 20.00 .............................ATATTGTCCTGTCACAGTAGT................................................................................ 21 1 27.00 2.00 7.00 18.00 .............................ATATTGTCCTGTCACAGCAGTAAA............................................................................. 24 1 27.00 3.00 0.00 24.00 ..............................TATTGTCCTGTCACAGCAG................................................................................. 19 1 27.00 0.00 0.00 27.00 .............................ATATTGTCCTGTxxCAGCAGT................................................................................ 19 1 27.00 0.00 9.00 18.00 .............................ATATTGTCCAGTCACAGCAGT................................................................................ 21 1 26.00 0.00 1.00 25.00 .............................ATATTGTCCTGTCACAGCACT................................................................................ 21 1 26.00 3.00 1.00 22.00 .............................ATATTGTCTTGTCACAGCAGT................................................................................ 21 1 26.00 2.00 10.00 14.00 .............................ATATTGTCCTCTCACAGCAGT................................................................................ 21 1 26.00 1.00 1.00 24.00 .............................ATATTGTCCTATCACAGCAGT................................................................................ 21 1 26.00 3.00 1.00 22.00 .............................ATATTGTCCTGTTACAGCAGTA............................................................................... 22 1 24.00 0.00 23.00 1.00 .............................ATGTTGTCCTGTCACAGCAGT................................................................................ 21 1 24.00 3.00 5.00 16.00 .............................ATATTGTCCTGTCACAGCAGTTT.............................................................................. 23 1 22.00 0.00 0.00 22.00 .............................ATATTGTCCTGTCACAGCAA................................................................................. 20 1 21.00 0.00 0.00 21.00 .............................ATAATGTCCTGTCACAGCAGT................................................................................ 21 1 20.00 1.00 3.00 16.00 .............................ATATTGTCCTGTCCCAGCAGT................................................................................ 21 1 20.00 2.00 3.00 15.00 .............................ATATTGTCCTTTCACAGCAGT................................................................................ 21 1 20.00 1.00 2.00 17.00 .............................ATATTGTCCTGTCAAAGCAGT................................................................................ 21 1 18.00 0.00 3.00 15.00 ...............................ATATTCCTGTCACAGCAGT................................................................................ 19 1 18.00 2.00 3.00 13.00 .............................ATATTGTCCTGTCACAGCATT................................................................................ 21 1 18.00 1.00 4.00 13.00 .............................ATATTGTCCTGCCACAGCAGTA............................................................................... 22 1 17.00 2.00 13.00 2.00 .............................ATATTGTCCTGTCACAACAGT................................................................................ 21 1 17.00 1.00 6.00 10.00 .............................ATATTCTCCTGTCACAGCAGTA............................................................................... 22 1 16.00 0.00 11.00 5.00 .............................ATATTGTCCTGTCACAGCAGTG............................................................................... 22 1 16.00 0.00 12.00 4.00 .............................ATATTGTCCTGTCACAGCAGG................................................................................ 21 1 16.00 0.00 2.00 14.00 ..........................................................................CTGCTGGGTCGGGGCATTAAC................................... 21 1 15.00 0.00 13.00 2.00 .............................ATATTGTCCTGTCACACCAG................................................................................. 20 1 14.00 2.00 1.00 11.00 .............................ATATTGTCCTGTCACAGCCGTA............................................................................... 22 1 14.00 3.00 9.00 2.00 .............................ATGTTGTCCTGTCACAGCAGTA............................................................................... 22 1 13.00 0.00 7.00 6.00 .............................ATATTGTCCTGACACAGCAGT................................................................................ 21 1 13.00 1.00 6.00 6.00 .............................ATATTGTCCTGTCACATCAGTA............................................................................... 22 1 13.00 0.00 6.00 7.00 .............................ATATAGTCCTGTCACAGCAGT................................................................................ 21 1 13.00 0.00 1.00 12.00 .............................ATATTGTCCTGTxxCAGCAGTA............................................................................... 20 2 6.50 0.00 5.50 1.00 .............................ATATTGTCTTGTCACAGCAGTA............................................................................... 22 1 13.00 0.00 10.00 3.00 .............................ATATTGTCCTGTCACAGCGGTA............................................................................... 22 1 13.00 0.00 6.00 7.00 .............................ATATTGTCCTGTCACAGCCG................................................................................. 20 1 13.00 2.00 1.00 10.00 .............................ATATTGTCCTGTCACATCAG................................................................................. 20 1 12.00 0.00 0.00 12.00 .............................ATATTATCCTGTCACAGCAG................................................................................. 20 1 12.00 0.00 0.00 12.00 .............................ATATTGTCCTGTCGCAGCAGTA............................................................................... 22 1 12.00 0.00 10.00 2.00 .............................ATATTGTCCTGTCACACCAGTA............................................................................... 22 1 12.00 0.00 10.00 2.00 .............................ATTTTGTCCTGTCACAGCAGT................................................................................ 21 1 12.00 0.00 4.00 8.00 .............................ATATTGTCCTGCCACAGCAG................................................................................. 20 1 12.00 0.00 0.00 12.00 .............................ATATTGTGCTGTCACAGCAGT................................................................................ 21 1 11.00 1.00 0.00 10.00 .............................ATATTGTCCTGTCACTGCAGT................................................................................ 21 1 11.00 0.00 8.00 3.00 .............................ATATTGCCCTGTCACAGCAGTA............................................................................... 22 1 11.00 0.00 7.00 4.00 .............................ATATTGTCCTGTCACAGTAGTA............................................................................... 22 1 10.00 0.00 7.00 3.00 .............................ATATTTTCCTGTCACAGCA.................................................................................. 19 1 10.00 0.00 0.00 10.00 .............................ATATTGTCCTGTCACAGT................................................................................... 18 1 10.00 0.00 0.00 10.00 .............................ATTTTGTCCTGTCACAGCAGTA............................................................................... 22 1 10.00 0.00 10.00 0.00 .............................ATATTGTCCTGTCACAGCAGCA............................................................................... 22 1 10.00 0.00 6.00 4.00 .............................ATATTGTCCTGTCGCAGCAG................................................................................. 20 1 10.00 0.00 0.00 10.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3R:25064545-25064667 +	85.78	TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG --------GAATTGGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGAGGCGGCCAG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .............................ATATTGTCCTGTCACAGCAGT................................................................................ 21 1 46131.00 912.00 17480.00 1159.00 25139.00 1441.00 .............................ATATTGTCCTGTCACAGCAGTA............................................................................... 22 1 7400.00 3804.00 1115.00 34.00 1470.00 977.00 .............................ATATTGTCCTGTCACAGCAG................................................................................. 20 1 6709.00 10.00 1789.00 24.00 2068.00 2818.00 .............................ATATTGTCCTGTCACAGCAGTT............................................................................... 22 1 1230.00 18.00 469.00 7.00 719.00 17.00 .............................ATATTGTCCTGTCACAGCCGT................................................................................ 21 1 774.00 12.00 177.00 0.00 581.00 4.00 .............................ATATTGTCCTGTCACAGCA.................................................................................. 19 1 655.00 2.00 217.00 3.00 373.00 60.00 .............................ATATTGTCCTGTCACAGCAGTAA.............................................................................. 23 1 625.00 21.00 264.00 3.00 332.00 5.00 .............................ATATTGTCCTGTCACATCAGT................................................................................ 21 1 393.00 2.00 108.00 4.00 278.00 1.00 .............................ATATTGTCCTGTCACAGCAGC................................................................................ 21 1 391.00 0.00 36.00 1.00 184.00 170.00 .............................ATATTGTCCTGTCACCGCAGT................................................................................ 21 1 368.00 0.00 62.00 0.00 306.00 0.00 .............................ATATTGTCCTGTCACAGCAGG................................................................................ 21 1 345.00 4.00 66.00 1.00 107.00 167.00 .............................ATATTGTCCTGTCACAGCATT................................................................................ 21 1 235.00 0.00 39.00 0.00 196.00 0.00 .............................ATATTGGCCTGTCACAGCAGT................................................................................ 21 1 182.00 4.00 24.00 1.00 151.00 2.00 .............................ATATTGTCCTGTCACAGCGGT................................................................................ 21 1 157.00 3.00 27.00 2.00 125.00 0.00 .............................ATATTGTCCTTTCACAGCAGT................................................................................ 21 1 150.00 1.00 61.00 1.00 84.00 3.00 .............................ATATTGTCCTGTCCCAGCAGT................................................................................ 21 1 149.00 1.00 24.00 0.00 124.00 0.00 .............................ATATTGTCCTGGCACAGCAGT................................................................................ 21 1 136.00 1.00 39.00 0.00 96.00 0.00 .............................ATATTGTCCTGCCACAGCAGT................................................................................ 21 1 134.00 3.00 39.00 0.00 92.00 0.00 .............................ATATTGTCCTGTCACAGCTGT................................................................................ 21 1 130.00 1.00 21.00 0.00 107.00 1.00 .............................ATATTGCCCTGTCACAGCAGT................................................................................ 21 1 128.00 1.00 27.00 1.00 97.00 2.00 .............................ATATTGTCCTGTCACAGCAGA................................................................................ 21 1 102.00 1.00 20.00 0.00 77.00 4.00 .............................ATATTGTCCTGTCACAGCAGTC............................................................................... 22 1 100.00 12.00 30.00 0.00 52.00 6.00 .............................ATATTGTCCTGTCACAGCCG................................................................................. 20 1 99.00 0.00 20.00 0.00 58.00 21.00 .............................ATATTGTCCTGTCACACCAGT................................................................................ 21 1 99.00 0.00 15.00 0.00 84.00 0.00 .............................ATGTTGTCCTGTCACAGCAGT................................................................................ 21 1 89.00 1.00 27.00 0.00 61.00 0.00 .............................ATATTGTCCTGTCACAGCAC................................................................................. 20 1 83.00 0.00 1.00 0.00 6.00 76.00 .............................ATATTGTCCTGTCACAGCAGTAT.............................................................................. 23 1 78.00 4.00 23.00 1.00 28.00 22.00 .............................ATATTGTACTGTCACAGCAGT................................................................................ 21 1 77.00 1.00 17.00 0.00 59.00 0.00 .............................ATATTGTCCTGTCACAGCACT................................................................................ 21 1 71.00 0.00 23.00 0.00 48.00 0.00 .............................ATATTGTCCTGTCACAGCCGTA............................................................................... 22 1 70.00 32.00 8.00 0.00 28.00 2.00 .............................AGATTGTCCTGTCACAGCAGT................................................................................ 21 1 70.00 0.00 16.00 0.00 54.00 0.00 .............................ATAGTGTCCTGTCACAGCAGT................................................................................ 21 1 69.00 0.00 22.00 0.00 47.00 0.00 .............................ATATTGTCCTGTCACAGC................................................................................... 18 1 67.00 0.00 3.00 0.00 4.00 60.00 ..........................................................................CTGCTGGGTCGGGGCATTAACA.................................. 22 1 65.00 35.00 2.00 0.00 6.00 22.00 .............................ATATTGTCCTGTCACGGCAGT................................................................................ 21 1 59.00 0.00 14.00 0.00 45.00 0.00 .............................ATATTGTCCTGTCACAACAGT................................................................................ 21 1 58.00 0.00 21.00 1.00 35.00 1.00 .............................ATATTGTCCTGTCAAAGCAGT................................................................................ 21 1 56.00 2.00 7.00 1.00 46.00 0.00 .............................ATATTGTCCTGTCACAGAAGT................................................................................ 21 1 55.00 0.00 12.00 1.00 42.00 0.00 .............................ATATCGTCCTGTCACAGCAGT................................................................................ 21 1 54.00 0.00 26.00 3.00 25.00 0.00 .............................ATATTGTCCCGTCACAGCAGT................................................................................ 21 1 54.00 0.00 17.00 0.00 36.00 1.00 .............................ATATTGTCCTGTCGCAGCAGT................................................................................ 21 1 53.00 1.00 21.00 1.00 29.00 1.00 .............................ATACTGTCCTGTCACAGCAGT................................................................................ 21 1 52.00 1.00 21.00 1.00 29.00 0.00 .............................ATATTGTCCTGTTACAGCAGT................................................................................ 21 1 52.00 0.00 28.00 1.00 22.00 1.00 .............................ATATTGTCCTATCACAGCAGT................................................................................ 21 1 51.00 2.00 16.00 2.00 31.00 0.00 .............................ATATTATCCTGTCACAGCAGT................................................................................ 21 1 50.00 0.00 20.00 0.00 28.00 2.00 .............................ATATTGTCCTGTCACCGCCGT................................................................................ 21 1 50.00 1.00 8.00 0.00 41.00 0.00 .............................ATATTGTCCTCTCACAGCAGT................................................................................ 21 1 48.00 1.00 13.00 1.00 33.00 0.00 .............................ATATTGTCCTGTCACATCAG................................................................................. 20 1 48.00 0.00 12.00 0.00 31.00 5.00 .............................ACATTGTCCTGTCACAGCAGT................................................................................ 21 1 48.00 1.00 18.00 0.00 29.00 0.00 .............................ATATTCTCCTGTCACAGCAGT................................................................................ 21 1 48.00 1.00 12.00 1.00 34.00 0.00 .............................ATATTGTCCTGTAACAGCAGT................................................................................ 21 1 48.00 0.00 14.00 0.00 34.00 0.00 .............................ATATTGTCCTGTCACAGCAGTCA.............................................................................. 23 1 47.00 0.00 24.00 3.00 20.00 0.00 .............................ATATTGTCCTGTCACTGCAGT................................................................................ 21 1 46.00 1.00 7.00 0.00 38.00 0.00 .............................ATATTGTCCTGTCACAGCAGTGT.............................................................................. 23 1 46.00 0.00 18.00 2.00 25.00 1.00 .............................ATATTGTCCTGTCACAGCAT................................................................................. 20 1 45.00 0.00 10.00 0.00 33.00 2.00 .............................ATCTTGTCCTGTCACAGCAGT................................................................................ 21 1 44.00 0.00 8.00 1.00 35.00 0.00 .............................ATATTGTCCTGTCATAGCAGT................................................................................ 21 1 43.00 0.00 16.00 1.00 26.00 0.00 .............................ATATTGACCTGTCACAGCAGT................................................................................ 21 1 43.00 3.00 4.00 0.00 36.00 0.00 .............................ATATTGTCCTGTCACATCATT................................................................................ 21 1 42.00 0.00 8.00 0.00 34.00 0.00 .............................ATATTGTCTTGTCACAGCAGT................................................................................ 21 1 41.00 1.00 10.00 0.00 29.00 1.00 .............................GTATTGTCCTGTCACAGCAGT................................................................................ 21 1 38.00 3.00 17.00 0.00 18.00 0.00 .............................ATATTGTCCTGTCACAGCAGTG............................................................................... 22 1 37.00 11.00 8.00 0.00 11.00 7.00 .............................ATATTGTCCTGTCACATCAGTA............................................................................... 22 1 37.00 4.00 14.00 0.00 19.00 0.00 .............................ATATTGTCATGTCACAGCAGT................................................................................ 21 1 36.00 2.00 9.00 0.00 24.00 1.00 .............................ATATTGTCCTGTCACAGTAGT................................................................................ 21 1 35.00 1.00 10.00 2.00 22.00 0.00 .............................ATATTGTCCGGTCACAGCAGT................................................................................ 21 1 35.00 0.00 12.00 0.00 23.00 0.00 .............................ATATTGTCCTGTCACAGCAGTAAA............................................................................. 24 1 34.00 0.00 11.00 1.00 19.00 3.00 .............................ATATTGTCCTGTCTCAGCAGT................................................................................ 21 1 34.00 0.00 4.00 0.00 30.00 0.00 .............................ATATTTTCCTGTCACAGCAGT................................................................................ 21 1 29.00 0.00 6.00 0.00 23.00 0.00 .............................ATATTGTCCTGTCCCAGCCGT................................................................................ 21 1 27.00 0.00 2.00 0.00 25.00 0.00 ..............................TATTGTCCTGTCACAGCAGT................................................................................ 20 1 26.00 0.00 12.00 0.00 14.00 0.00 .............................ATATTGTCCTGTCACAGCGG................................................................................. 20 1 26.00 0.00 5.00 0.00 9.00 12.00 .............................ATATTGTCCTGTCACAGCAGTTT.............................................................................. 23 1 25.00 0.00 13.00 0.00 11.00 1.00 ............................CATATTGTCCTGTCACAGCAGT................................................................................ 22 1 24.00 2.00 10.00 1.00 11.00 0.00 .............................ATATTGTGCTGTCACAGCAGT................................................................................ 21 1 24.00 0.00 9.00 0.00 15.00 0.00 .............................ATATTGTCCTGACACAGCAGT................................................................................ 21 1 24.00 3.00 7.00 0.00 14.00 0.00 .............................ATATTGTCCTGGCACAGCAGG................................................................................ 21 1 22.00 1.00 6.00 0.00 15.00 0.00 .............................ATATTGTCCTGTCACAGCCGC................................................................................ 21 1 22.00 0.00 1.00 0.00 21.00 0.00 ................................................................................................TTGTTGAGCGTCATTAGCAAC............. 21 1 22.00 0.00 0.00 0.00 2.00 20.00 .............................ATATTGTCCTGTCACCGCAG................................................................................. 20 1 22.00 0.00 5.00 0.00 17.00 0.00 .............................ATATTGGCCTGTCACAGCAGTA............................................................................... 22 1 21.00 9.00 1.00 0.00 11.00 0.00 ..........................................................................CTGCTGGGTCGGGGCATTAAC................................... 21 1 21.00 13.00 1.00 0.00 1.00 6.00 .............................ATATTGTCCTGTCACAGCCGTT............................................................................... 22 1 21.00 0.00 6.00 0.00 15.00 0.00 .............................ATATTGTCATGTCACAGCAGTA............................................................................... 22 1 20.00 14.00 1.00 0.00 5.00 0.00 .............................CTATTGTCCTGTCACAGCAGT................................................................................ 21 1 20.00 1.00 13.00 0.00 6.00 0.00 .............................ATATTGTCCTGTCACAGCAAT................................................................................ 21 1 20.00 0.00 10.00 0.00 10.00 0.00 .............................TTATTGTCCTGTCACAGCAGT................................................................................ 21 1 20.00 0.00 9.00 0.00 11.00 0.00 .............................ATATTGTCCTGTCACCGCAGTA............................................................................... 22 1 20.00 7.00 1.00 0.00 12.00 0.00 .............................ATATTGTCCTGTCACAGCAGGA............................................................................... 22 1 19.00 7.00 1.00 0.00 11.00 0.00 .............................ATATGGTCCTGTCACAGCAGT................................................................................ 21 1 19.00 0.00 1.00 0.00 18.00 0.00 .............................ATATTGTCCTGTCACAGCAGTAG.............................................................................. 23 1 19.00 1.00 4.00 0.00 12.00 2.00 .............................ATATTGTCCTGGCACAGCAGTA............................................................................... 22 1 19.00 7.00 2.00 0.00 10.00 0.00 .............................ATATTGTCCTTTCACAGCAG................................................................................. 20 1 18.00 0.00 6.00 0.00 9.00 3.00 .............................ATATTGTCCTGTCACAGCAA................................................................................. 20 1 18.00 0.00 6.00 0.00 12.00 0.00 .............................ATATTGCCCTGTCACAGCAGTA............................................................................... 22 1 18.00 9.00 1.00 0.00 4.00 4.00 .............................ATATTGTCCTGTCACAGCAGCA............................................................................... 22 1 17.00 5.00 3.00 0.00 9.00 0.00 .............................ATATTGTTCTGTCACAGCAGT................................................................................ 21 1 17.00 1.00 5.00 0.00 10.00 1.00 .............................ATATTGTCCTGTCACAGCAGTAC.............................................................................. 23 1 17.00 1.00 3.00 0.00 10.00 3.00 .............................ATATTGTCCTGTCACAGCATTA............................................................................... 22 1 17.00 0.00 5.00 0.00 12.00 0.00 .............................ATATTGTCCTGCCACAGCAGTA............................................................................... 22 1 17.00 7.00 6.00 0.00 2.00 2.00 .............................ATATTGTCCTGTCACAGCAGCT............................................................................... 22 1 16.00 1.00 5.00 0.00 10.00 0.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4820:6627814-6627943 +	96.95	TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGTCAG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .............................ATATTGTCCTGTCACAGCAGT................................................................................ 21 1 54911.00 1131.00 6048.00 0.00 47732.00 .............................ATATTGTCCTGTCACAGCAGTA............................................................................... 22 1 9914.00 2723.00 559.00 0.00 6632.00 .............................ATATTGTCCTGTCACAGCAG................................................................................. 20 1 6316.00 13.00 599.00 0.00 5704.00 .............................ATATTGTCCTGTCACAGCA.................................................................................. 19 1 5135.00 3.00 219.00 0.00 4913.00 .............................ATATTGTCCTGTCACAGCAGTAA.............................................................................. 23 1 1738.00 27.00 86.00 0.00 1625.00 .............................ATATTGTCCTGTCACAGCAGTT............................................................................... 22 1 1603.00 15.00 128.00 0.00 1460.00 .............................ATATTGTCATGTCACAGCAGT................................................................................ 21 1 357.00 1.00 4.00 0.00 352.00 .............................ATATTGTCCTGTCACATCAGT................................................................................ 21 1 320.00 22.00 53.00 0.00 245.00 .............................ATATTGTCCTGTAACAGCAGT................................................................................ 21 1 286.00 0.00 5.00 0.00 281.00 .............................ATATTGTACTGTCACAGCAGT................................................................................ 21 1 273.00 1.00 3.00 0.00 269.00 .............................ATATTGTCCTGTCACAGAAGT................................................................................ 21 1 200.00 1.00 9.00 0.00 190.00 .............................ATATTGTCCTGTCACAGCAGA................................................................................ 21 1 171.00 2.00 16.00 0.00 153.00 .............................ATATTGTCCTTTCACAGCAGT................................................................................ 21 1 159.00 8.00 22.00 0.00 129.00 .............................ATATTTTCCTGTCACAGCAGT................................................................................ 21 1 145.00 4.00 3.00 0.00 138.00 .............................ATATTGTCCTGTCACAGCCGT................................................................................ 21 1 144.00 17.00 73.00 0.00 54.00 .............................ATATTGTCCTGTCACAGCATT................................................................................ 21 1 140.00 5.00 28.00 0.00 107.00 .............................ATATTGTCCTGTCAAAGCAGT................................................................................ 21 1 131.00 1.00 9.00 0.00 121.00 .............................ATATTGTCCTGTCACAGCAGC................................................................................ 21 1 126.00 6.00 22.00 0.00 98.00 .............................ATATTGTCCTGTCACAGCAGTAT.............................................................................. 23 1 125.00 3.00 12.00 0.00 110.00 ..............................TATTGTCCTGTCACAGCAGT................................................................................ 20 1 121.00 1.00 12.00 0.00 108.00 ..............................TATTGTCCTGTCACAGCAGTA............................................................................... 21 1 107.00 9.00 4.00 0.00 94.00 .............................ATATTGTCCTGTCACATCAGTA............................................................................... 22 1 106.00 60.00 5.00 0.00 41.00 .............................ATATTGTCCTGTCACAGCAGTAAA............................................................................. 24 1 99.00 1.00 4.00 0.00 94.00 .............................ATATTGTCCTGCCACAGCAGT................................................................................ 21 1 93.00 2.00 14.00 0.00 77.00 ..........................................................................CTGCTGGGTCGGGGCATTAACA.................................. 22 1 85.00 16.00 23.00 0.00 46.00 .............................ATATTGTCCTGTCACCGCAGT................................................................................ 21 1 82.00 1.00 29.00 0.00 52.00 .............................ATATTGTCCCGTCACAGCAGT................................................................................ 21 1 82.00 0.00 4.00 0.00 78.00 .............................ATATTGTCCTGTCACAGCGGT................................................................................ 21 1 79.00 0.00 27.00 0.00 52.00 .............................ATATTGCCCTGTCACAGCAGT................................................................................ 21 1 73.00 3.00 5.00 0.00 65.00 .............................ATCTTGTCCTGTCACAGCAGT................................................................................ 21 1 71.00 1.00 7.00 0.00 63.00 .............................ACATTGTCCTGTCACAGCAGT................................................................................ 21 1 67.00 2.00 6.00 0.00 59.00 .............................ATATTGTCCTGTCACAGCAGTGT.............................................................................. 23 1 67.00 0.00 11.00 0.00 56.00 .............................ATATTGTCCTGTCGCAGCAGT................................................................................ 21 1 65.00 1.00 6.00 0.00 58.00 ...............................ATTGTCCTGTCACAGCAGT................................................................................ 19 1 63.00 1.00 6.00 0.00 56.00 .............................ATATTGTCCTGTCACAGC................................................................................... 18 1 61.00 0.00 1.00 0.00 60.00 .............................ATATTGTCCTGTCACAGCAGTC............................................................................... 22 1 59.00 9.00 15.00 0.00 35.00 .............................ATGTTGTCCTGTCACAGCAGT................................................................................ 21 1 58.00 0.00 4.00 0.00 54.00 .............................ATATTGTCCTGTCACAGCAGTG............................................................................... 22 1 57.00 10.00 4.00 0.00 43.00 .............................ATATTGTCCTGTCACACCAGT................................................................................ 21 1 57.00 3.00 8.00 0.00 46.00 .............................ATATTGTCCTGTTACAGCAGT................................................................................ 21 1 57.00 0.00 12.00 0.00 45.00 .............................GTATTGTCCTGTCACAGCAGT................................................................................ 21 1 55.00 0.00 4.00 0.00 51.00 .............................ATATTGTCCTGTCATAGCAGT................................................................................ 21 1 53.00 2.00 5.00 0.00 46.00 .............................ATATTGTCCTGTCCCAGCAGT................................................................................ 21 1 53.00 1.00 18.00 0.00 34.00 .............................ATATTGTCCTGTCACATCAG................................................................................. 20 1 46.00 1.00 7.00 0.00 38.00 .............................ATATTGTCCTGTCACGGCAGT................................................................................ 21 1 46.00 2.00 6.00 0.00 38.00 .............................ATATTGTCCTGTCACAGCAGG................................................................................ 21 1 46.00 3.00 13.00 0.00 30.00 .............................ATATTGTCATGTCACAGCAGTA............................................................................... 22 1 46.00 1.00 1.00 0.00 44.00 .............................ATATTGTCCTGTCACAGCACT................................................................................ 21 1 45.00 12.00 4.00 0.00 29.00 .............................ATATCGTCCTGTCACAGCAGT................................................................................ 21 1 44.00 1.00 2.00 0.00 41.00 .............................ATATTGTCCTGTCACAGCAT................................................................................. 20 1 43.00 0.00 7.00 0.00 36.00 .............................ATATTGTCCTGTCACAGCAGTAG.............................................................................. 23 1 43.00 0.00 1.00 0.00 42.00 .............................ATATTGTCCTGTCACAGTAGT................................................................................ 21 1 43.00 0.00 5.00 0.00 38.00 .............................ATATTGTCCTCTCACAGCAGT................................................................................ 21 1 42.00 1.00 5.00 0.00 36.00 .............................ATACTGTCCTGTCACAGCAGT................................................................................ 21 1 40.00 2.00 3.00 0.00 35.00 .............................ATATTCTCCTGTCACAGCAGT................................................................................ 21 1 39.00 1.00 6.00 0.00 32.00 .............................ATATTGTCCTGTCACAACAGT................................................................................ 21 1 39.00 2.00 7.00 0.00 30.00 .............................ATATTATCCTGTCACAGCAGT................................................................................ 21 1 39.00 2.00 5.00 0.00 32.00 .............................ATATTGTCCTGTAACAGCAGTA............................................................................... 22 1 38.00 0.00 1.00 0.00 37.00 .............................ATATTGTCCTGTCACAGCAGTAC.............................................................................. 23 1 38.00 3.00 5.00 0.00 30.00 .............................ATATTGTTCTGTCACAGCAGT................................................................................ 21 1 38.00 2.00 6.00 0.00 30.00 .............................ATATTGTCCTGTxxCAGCAGT................................................................................ 19 1 38.00 1.00 0.00 0.00 37.00 .............................ATATTGTCCTTTCACAGCAGTA............................................................................... 22 1 37.00 17.00 3.00 0.00 17.00 .............................ATTTTGTCCTGTCACAGCAGT................................................................................ 21 1 37.00 0.00 1.00 0.00 36.00 .............................ATATTGTCCxxTCACAGCAGT................................................................................ 19 1 37.00 0.00 0.00 0.00 37.00 .............................ATATTGTCCTGTCACATCA.................................................................................. 19 1 37.00 0.00 3.00 0.00 34.00 ............................CATATTGTCCTGTCACAGCAGT................................................................................ 22 1 36.00 0.00 5.00 0.00 31.00 .............................ATATTGTCATGTCACAGCA.................................................................................. 19 1 36.00 0.00 1.00 0.00 35.00 .............................TTATTGTCCTGTCACAGCAGT................................................................................ 21 1 35.00 2.00 1.00 0.00 32.00 .............................ATATTGTCCTATCACAGCAGT................................................................................ 21 1 35.00 0.00 9.00 0.00 26.00 .............................ATATTGTCCTGTCACAGCATTA............................................................................... 22 1 34.00 14.00 2.00 0.00 18.00 .............................ATATTGTCTTGTCACAGCAGT................................................................................ 21 1 34.00 0.00 10.00 0.00 24.00 .............................ATATTGTACTGTCACAGCAGTA............................................................................... 22 1 33.00 2.00 1.00 0.00 30.00 .............................ATAGTGTCCTGTCACAGCAGT................................................................................ 21 1 33.00 2.00 7.00 0.00 24.00 .............................ATATTTTCCTGTCACAGCAGTA............................................................................... 22 1 32.00 11.00 1.00 0.00 20.00 .............................ATATTGTCCTGTCACAGCAGTGA.............................................................................. 23 1 32.00 0.00 0.00 0.00 32.00 .............................CTATTGTCCTGTCACAGCAGT................................................................................ 21 1 31.00 2.00 4.00 0.00 25.00 .............................ATATTGTACTGTCACAGCAG................................................................................. 20 1 30.00 0.00 0.00 0.00 30.00 .............................ATATTGTCATGTCACAGCAG................................................................................. 20 1 29.00 0.00 0.00 0.00 29.00 .............................ATATTGTCCTGTCACAGCCGTA............................................................................... 22 1 29.00 19.00 4.00 0.00 6.00 .............................ATATTGTACTGTCACAGCA.................................................................................. 19 1 28.00 0.00 0.00 0.00 28.00 .............................ATAATGTCCTGTCACAGCAGT................................................................................ 21 1 28.00 0.00 4.00 0.00 24.00 .............................ATATTGTCCTGTCACAGCAGCA............................................................................... 22 1 28.00 18.00 1.00 0.00 9.00 .............................ATATTGTCCTGTCACAGCAGTTT.............................................................................. 23 1 28.00 0.00 3.00 0.00 25.00 .............................ATATTGTCCTTTCACAGCA.................................................................................. 19 1 27.00 0.00 1.00 0.00 26.00 .............................ATATTGTCCTGTCACAGCAGTTG.............................................................................. 23 1 27.00 0.00 3.00 0.00 24.00 .............................ATATTGGCCTGTCACAGCAGT................................................................................ 21 1 26.00 13.00 9.00 0.00 4.00 ...............................ATTGTCCTGTCACAGCAGTA............................................................................... 20 1 25.00 0.00 0.00 0.00 25.00 .............................ATATTGTCCTGTCACAGCAGGA............................................................................... 22 1 25.00 20.00 1.00 0.00 4.00 .............................ATATTGTCCTGTCACCGCAGTA............................................................................... 22 1 25.00 14.00 1.00 0.00 10.00 .............................ATATTGTCCTGTCAAAGCAGTA............................................................................... 22 1 25.00 4.00 1.00 0.00 20.00 .............................ATATTGTCCTGTAACAGCAG................................................................................. 20 1 23.00 0.00 0.00 0.00 23.00 .............................ATATTGTCCTGTCACAGAAGTA............................................................................... 22 1 23.00 0.00 1.00 0.00 22.00 .............................ATATTGTCCTGTCACTGCAGT................................................................................ 21 1 22.00 0.00 5.00 0.00 17.00 .............................ATATTGTCCTGCCACAGCAGTA............................................................................... 22 1 21.00 6.00 1.00 0.00 14.00 .............................ATATTGTCCTGTAACAGCA.................................................................................. 19 1 21.00 0.00 0.00 0.00 21.00 .............................ATATTGTCCTGTCACAGAAG................................................................................. 20 1 20.00 0.00 0.00 0.00 20.00 .............................ATATTGTCCTTTCACAGCAG................................................................................. 20 1 19.00 0.00 3.00 0.00 16.00 .............................ATATTGTCCTGTCACAGCAA................................................................................. 20 1 19.00 0.00 2.00 0.00 17.00 ...............................ATATTCCTGTCACAGCAGT................................................................................ 19 1 19.00 0.00 0.00 0.00 19.00 .............................ATATTTTCCTGTCACAGCAG................................................................................. 20 1 19.00 0.00 0.00 0.00 19.00 .............................ATATTGTCATGTCACAGCAGTAA.............................................................................. 23 1 19.00 0.00 0.00 0.00 19.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000454055:1331162-1331296 -	85.75	TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA------GCGGCGGACAG TATTCCATGGAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTG-AAAACTATATTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGACAGGCGGCGGCGGCAAG Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000409798:1136852-1136983 +	89.62	TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATA--TTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG TATGCCACAAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAATACTATATCTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGTGGCGGCAAG Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302136:2260816-2260952 -	83.88	TATA-CCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG------CGGCGGACAG TACATCCATCGAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATACTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGAGGCGGCGGCGGCAAG Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415257:294611-294745 -	85.75	TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG------CGGCGGACAG TGTAC-ACAAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGAGGCGGCGGCGGCAAG Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000491280:3122819-3122940 -	83.76	TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG TACACTACGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG---------- Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000779501:511380-511509 +	93.92	TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG TATGTCACGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGAGGCGGCCAG Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302639:1623489-1623623 +	86.39	TATACCATG-AAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG---- TATATCGCGCAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCAGCGGAAAACTCC Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13340:3670416-3670527 -	68.28	TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTA--TAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG TA-------------GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGG-------AG Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo .............................ATATTGTCCTGTCACAGCAGT.................................................................................. 21 1 52523.00 2408.00 34186.00 15698.00 231.00 .............................ATATTGTCCTGTCACAGCAGTA................................................................................. 22 1 8613.00 66.00 6898.00 1264.00 385.00 .............................ATATTGTCCTGTCACAGCAG................................................................................... 20 1 7515.00 52.00 5468.00 1987.00 8.00 .............................ATATTGTCCTGTCACAGCAGTT................................................................................. 22 1 5652.00 58.00 4620.00 973.00 1.00 .............................ATATTGTCCTGTCACAGCA.................................................................................... 19 1 2051.00 4.00 1571.00 475.00 1.00 .............................ATATTGTCCTGTCACAGCAGTAA................................................................................ 23 1 1152.00 7.00 902.00 230.00 13.00 .............................ATATTGTCCTGTCACAGCAGA.................................................................................. 21 1 771.00 38.00 644.00 88.00 1.00 .............................ATATTGTCCTGTCACAGCAGTGT................................................................................ 23 1 484.00 37.00 268.00 179.00 0.00 .............................ATATTGTCCTGTCACATCAGT.................................................................................. 21 1 419.00 16.00 326.00 70.00 7.00 .............................ATATTGTCCTGTCACAGAAGT.................................................................................. 21 1 326.00 15.00 281.00 30.00 0.00 .............................ATATTGTCCTGTCACAGCAGC.................................................................................. 21 1 256.00 10.00 106.00 139.00 1.00 .............................ATATTGTCCTGTCACAGCAGTGA................................................................................ 23 1 222.00 2.00 214.00 6.00 0.00 .............................ATATTGTCATGTCACAGCAGT.................................................................................. 21 1 190.00 6.00 111.00 73.00 0.00 .............................ATATTGTCCTGTCACAGCAGTTT................................................................................ 23 1 183.00 3.00 114.00 66.00 0.00 .............................ATATTGGCCTGTCACAGCAGT.................................................................................. 21 1 173.00 2.00 6.00 163.00 2.00 .............................ATATTGTCCTGTCACAGCAGTAT................................................................................ 23 1 161.00 0.00 134.00 27.00 0.00 .............................ATATTGTCCTGTCACAGCCGT.................................................................................. 21 1 159.00 2.00 10.00 143.00 4.00 .............................ATGTTGTCCTGTCACAGCAGT.................................................................................. 21 1 158.00 1.00 123.00 33.00 1.00 .............................ATATTGTCCTGTCACAGCAT................................................................................... 20 1 138.00 3.00 120.00 15.00 0.00 .............................ATATTGTCCTGTCACAGCAGTAG................................................................................ 23 1 135.00 5.00 109.00 21.00 0.00 .............................ATATTGTCCTGCCACAGCAGT.................................................................................. 21 1 135.00 7.00 40.00 88.00 0.00 .............................ATATTGCCCTGTCACAGCAGT.................................................................................. 21 1 122.00 3.00 46.00 72.00 1.00 .............................ATATTGTCCTGTCACAGCAGTTG................................................................................ 23 1 117.00 2.00 71.00 44.00 0.00 .............................ATATTGTACTGTCACAGCAGT.................................................................................. 21 1 114.00 4.00 60.00 50.00 0.00 .............................ATATTGTCCTGTCACAGCGGT.................................................................................. 21 1 112.00 2.00 45.00 64.00 1.00 .............................GTATTGTCCTGTCACAGCAGT.................................................................................. 21 1 103.00 4.00 64.00 35.00 0.00 .............................ATATTGTCCTGTCACAGCATT.................................................................................. 21 1 101.00 1.00 44.00 51.00 5.00 .............................ATATTGTCCTGTCACAGCAGG.................................................................................. 21 1 99.00 9.00 22.00 67.00 1.00 .............................ATATTGTCCTGGCACAGCAGT.................................................................................. 21 1 96.00 4.00 7.00 85.00 0.00 .............................ATATTGTCCTGTAACAGCAGT.................................................................................. 21 1 90.00 8.00 54.00 28.00 0.00 .............................ATATTGTCCTGTCACACCAGT.................................................................................. 21 1 82.00 2.00 14.00 66.00 0.00 .............................ATATTGACCTGTCACAGCAGT.................................................................................. 21 1 82.00 4.00 6.00 72.00 0.00 .............................ATATTGTCCCGTCACAGCAGT.................................................................................. 21 1 78.00 2.00 47.00 28.00 1.00 .............................ATATTGTCCTGTCACAGCAGTGG................................................................................ 23 1 77.00 0.00 69.00 8.00 0.00 .............................ACATTGTCCTGTCACAGCAGT.................................................................................. 21 1 77.00 6.00 52.00 19.00 0.00 .............................ATATTGTCCTGTCACATCAGTA................................................................................. 22 1 76.00 0.00 70.00 1.00 5.00 .............................ATATTGTCCTGTCACAGCAGTAAA............................................................................... 24 1 75.00 0.00 59.00 13.00 3.00 .............................ATATTGTCCTGTCACATCAG................................................................................... 20 1 74.00 0.00 55.00 19.00 0.00 .............................ATACTGTCCTGTCACAGCAGT.................................................................................. 21 1 74.00 4.00 33.00 37.00 0.00 .............................ATATTGTCCTGTCACCGCAGT.................................................................................. 21 1 72.00 3.00 7.00 62.00 0.00 .............................ATATTGTCCTGTCACAGCAGTG................................................................................. 22 1 69.00 1.00 51.00 16.00 1.00 .............................ATATTGTCCTGTCACAGCAGTTA................................................................................ 23 1 68.00 3.00 45.00 20.00 0.00 .............................ATATTGTCCTGTCACAGCACT.................................................................................. 21 1 65.00 0.00 14.00 50.00 1.00 .............................ATATTGTCCTTTCACAGCAGT.................................................................................. 21 1 65.00 6.00 32.00 24.00 3.00 .............................ATATTTTCCTGTCACAGCAGT.................................................................................. 21 1 63.00 4.00 51.00 6.00 2.00 .............................ATATTGTCCTCTCACAGCAGT.................................................................................. 21 1 62.00 3.00 10.00 46.00 3.00 .............................ATATTGTCCTATCACAGCAGT.................................................................................. 21 1 61.00 7.00 24.00 29.00 1.00 .............................ATATTGTCCTGTCACGGCAGT.................................................................................. 21 1 61.00 1.00 29.00 30.00 1.00 .............................ATATTGTCCTGTCACAGAAGTA................................................................................. 22 1 59.00 0.00 58.00 1.00 0.00 .............................ATATTGTCCTGTCATAGCAGT.................................................................................. 21 1 58.00 1.00 42.00 15.00 0.00 .............................ATATTGTCCTGTCGCAGCAGT.................................................................................. 21 1 57.00 8.00 32.00 17.00 0.00 .............................ATATTGTCCTGTCACAGCAGTTGT............................................................................... 24 1 57.00 6.00 22.00 29.00 0.00 .............................ATATTGTCCTGTCACATCAGTT................................................................................. 22 1 56.00 0.00 52.00 4.00 0.00 .............................ATATTGTCCTGTCACAGCTGT.................................................................................. 21 1 55.00 0.00 6.00 49.00 0.00 .............................ATATTGTCCTGTCACAGAAGTT................................................................................. 22 1 55.00 1.00 52.00 2.00 0.00 .............................ATATCGTCCTGTCACAGCAGT.................................................................................. 21 1 54.00 1.00 32.00 21.00 0.00 .............................ATATTGTCTTGTCACAGCAGT.................................................................................. 21 1 54.00 2.00 17.00 35.00 0.00 .............................AGATTGTCCTGTCACAGCAGT.................................................................................. 21 1 52.00 5.00 1.00 46.00 0.00 .............................ATATTGTCCTGTCACAGAAG................................................................................... 20 1 50.00 1.00 47.00 2.00 0.00 .............................ATATTGTCCTGACACAGCAGT.................................................................................. 21 1 48.00 12.00 16.00 20.00 0.00 .............................ATATTGTCCTGTCACAGCAGAA................................................................................. 22 1 48.00 1.00 43.00 4.00 0.00 .............................ATAGTGTCCTGTCACAGCAGT.................................................................................. 21 1 47.00 1.00 2.00 44.00 0.00 ..............................TATTGTCCTGTCACAGCAGT.................................................................................. 20 1 45.00 2.00 29.00 14.00 0.00 .............................ATATTCTCCTGTCACAGCAGT.................................................................................. 21 1 44.00 2.00 17.00 25.00 0.00 .............................ATATTGTCCTGTCACAGCAGAT................................................................................. 22 1 44.00 1.00 37.00 6.00 0.00 .............................ATATTGTTCTGTCACAGCAGT.................................................................................. 21 1 41.00 1.00 22.00 18.00 0.00 .............................ATATTATCCTGTCACAGCAGT.................................................................................. 21 1 41.00 3.00 21.00 17.00 0.00 .............................ATATTGTCCTGTCACAACAGT.................................................................................. 21 1 41.00 1.00 18.00 22.00 0.00 .............................ATATTGTCCTGTCACAGTAGT.................................................................................. 21 1 40.00 3.00 20.00 17.00 0.00 .............................ATATTGTCCTGTCACAGCAGCA................................................................................. 22 1 39.00 0.00 27.00 10.00 2.00 .............................ATATTGTCCTGTCACAGCT.................................................................................... 19 1 38.00 0.00 15.00 22.00 1.00 .............................ATATTGTCCTGTTACAGCAGT.................................................................................. 21 1 37.00 3.00 21.00 13.00 0.00 .............................ATATTGTCCTGTCACAGC..................................................................................... 18 1 36.00 0.00 17.00 18.00 1.00 .............................ATATTGTCCTGTCACAGCAGTC................................................................................. 22 1 36.00 1.00 12.00 23.00 0.00 .............................ATATTGTCCTGTCCCAGCAGT.................................................................................. 21 1 35.00 4.00 6.00 25.00 0.00 .............................ATATTGTCATGTCACAGCAGTA................................................................................. 22 1 35.00 2.00 26.00 7.00 0.00 .............................ATATTGTCCTGTCACAGCAGTAGT............................................................................... 24 1 34.00 1.00 15.00 18.00 0.00 .............................ATATGGTCCTGTCACAGCAGT.................................................................................. 21 1 34.00 0.00 3.00 31.00 0.00 .............................ATATTGTCCGGTCACAGCAGT.................................................................................. 21 1 34.00 0.00 4.00 30.00 0.00 ...............................ATTGTCCTGTCACAGCAGT.................................................................................. 19 1 32.00 1.00 27.00 4.00 0.00 .............................ATATTGTCCTGTCACAGCAA................................................................................... 20 1 31.00 1.00 14.00 16.00 0.00 .............................ATATTGTCCTGTCAAAGCAGT.................................................................................. 21 1 30.00 3.00 9.00 18.00 0.00 .............................ATATTGTCATGTCACAGCAG................................................................................... 20 1 28.00 1.00 13.00 14.00 0.00 .............................TTATTGTCCTGTCACAGCAGT.................................................................................. 21 1 27.00 1.00 5.00 21.00 0.00 .............................ATATTGTCCxxTCACAGCAGT.................................................................................. 19 1 26.00 3.00 23.00 0.00 0.00 .............................ATATTGGCCTGTCACAGCAG................................................................................... 20 1 25.00 0.00 2.00 23.00 0.00 .............................ATATTGTCCTGCCACAGCAGTA................................................................................. 22 1 25.00 0.00 15.00 8.00 2.00 .............................ATGTTGTCCTGTCACAGCAG................................................................................... 20 1 24.00 0.00 20.00 4.00 0.00 .............................ATATTGTCCTGTCACTGCAGT.................................................................................. 21 1 24.00 6.00 7.00 11.00 0.00 .............................ATATTGTCCTGCCACAGCAG................................................................................... 20 1 24.00 2.00 9.00 13.00 0.00 .............................ATATTGTCCTGTCACATCA.................................................................................... 19 1 23.00 0.00 20.00 3.00 0.00 ............................CATATTGTCCTGTCACAGCAGT.................................................................................. 22 1 23.00 0.00 7.00 16.00 0.00 .............................ATATTGTCCTGTCACAGCAGCT................................................................................. 22 1 23.00 0.00 16.00 7.00 0.00 ..............................TATTGTCCTGTCACAGCAGTA................................................................................. 21 1 22.00 0.00 19.00 2.00 1.00 .............................ATATTGTCCTGTCACAGCAGGA................................................................................. 22 1 22.00 0.00 13.00 7.00 2.00 .............................ATATTGTCCTGTCACAGCAGTTAT............................................................................... 24 1 22.00 2.00 8.00 12.00 0.00 .............................ATCTTGTCCTGTCACAGCAGT.................................................................................. 21 1 22.00 1.00 13.00 8.00 0.00 .............................ATATTGTGCTGTCACAGCAGT.................................................................................. 21 1 22.00 2.00 8.00 12.00 0.00 .............................ATATTGTCGTGTCACAGCAGT.................................................................................. 21 1 22.00 1.00 9.00 12.00 0.00 .............................ATATTGTCCTGTCACAGCCG................................................................................... 20 1 21.00 0.00 0.00 21.00 0.00 .............................GTATTGTCCTGTCACAGCAG................................................................................... 20 1 21.00 0.00 16.00 5.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396712:682201-682324 +	81.46	TATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTA--TAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAG TATACCGTCATATA-GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGG-------AG Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
4	chr2:21158113-21158302 -	39.3	TATACCATGAAAT------------C-------------GGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACG----------------------------AGCGGCGG---------ACAG TATCGAATTACATACGGCGTCGGATCGGAGCAGATGAGAGGGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAA--CTTAATTATAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAAAGAGAAGGAGAAGCTACAAAGCTACAAAGCTACGGAAAAATGCTACAG Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ......................................................ATATTGTCCTGTCACAGCAGT..................................................................................................................... 21 1 13895.00 1506.00 2055.00 10327.00 7.00 ......................................................ATATTGTCCTGTCACAGCAGTA.................................................................................................................... 22 1 9388.00 86.00 8201.00 1093.00 8.00 ......................................................ATATTGTCCTGTCACAGCAG...................................................................................................................... 20 1 1095.00 38.00 20.00 1029.00 8.00 ......................................................ATATTGTCCTGTCACAGCAGTT.................................................................................................................... 22 1 386.00 39.00 60.00 287.00 0.00 ......................................................ATATTGTCCTGTCACAGCA....................................................................................................................... 19 1 380.00 2.00 9.00 368.00 1.00 ......................................................ATATTGTCCTGTCACAGCAGTAA................................................................................................................... 23 1 169.00 2.00 51.00 116.00 0.00 ...................................................................................................CTGCTGGGTCGGGGCATTAACA....................................................................... 22 1 124.00 4.00 95.00 25.00 0.00 ......................................................ATATTGTCCTGTCACAGCCGT..................................................................................................................... 21 1 66.00 1.00 16.00 49.00 0.00 ......................................................ATATTGTCCTGTCACAGCCGTA.................................................................................................................... 22 1 64.00 0.00 62.00 2.00 0.00 ......................................................ATATTGTCCTGCCACAGCAGT..................................................................................................................... 21 1 50.00 0.00 3.00 46.00 1.00 ......................................................ATATTGGCCTGTCACAGCAGT..................................................................................................................... 21 1 45.00 0.00 9.00 36.00 0.00 ......................................................ATATTGTCCTGTCACAGCAGC..................................................................................................................... 21 1 45.00 3.00 5.00 37.00 0.00 ......................................................ATATTGTCCTGTCACAGCAGGA.................................................................................................................... 22 1 42.00 0.00 36.00 6.00 0.00 ......................................................ATATTGGCCTGTCACAGCAGTA.................................................................................................................... 22 1 42.00 0.00 39.00 3.00 0.00 ......................................................ATATTGTCCTGTCACCGCAGTA.................................................................................................................... 22 1 38.00 0.00 37.00 1.00 0.00 ......................................................ATATTGTCCTGTCACAGCAGG..................................................................................................................... 21 1 37.00 1.00 14.00 22.00 0.00 ...................................................................................................CTGCTGGGTCGGGGCATTAAC........................................................................ 21 1 36.00 2.00 25.00 9.00 0.00 ......................................................ATATTGTCCTGGCACAGCAGT..................................................................................................................... 21 1 35.00 0.00 8.00 27.00 0.00 ......................................................ATCTTGTCCTGTCACAGCAGT..................................................................................................................... 21 1 34.00 2.00 5.00 27.00 0.00 ......................................................ATATTGTCCTGTCACAGCAGTC.................................................................................................................... 22 1 34.00 1.00 20.00 13.00 0.00 ......................................................ATATTGTCCTGTCACAGCAGCA.................................................................................................................... 22 1 28.00 0.00 26.00 2.00 0.00 ......................................................ATATTGTCCTGTCACAGCAGTG.................................................................................................................... 22 1 28.00 0.00 26.00 2.00 0.00 ......................................................ATATTGTCATGTCACAGCAGTA.................................................................................................................... 22 1 28.00 0.00 28.00 0.00 0.00 ......................................................ATATTGTCCTGTCACAGCAGA..................................................................................................................... 21 1 27.00 1.00 2.00 24.00 0.00 ......................................................ATATTGTCCTGTCACAGCATT..................................................................................................................... 21 1 25.00 0.00 2.00 23.00 0.00 ......................................................ATATTGTCATGTCACAGCAGT..................................................................................................................... 21 1 25.00 0.00 10.00 15.00 0.00 ......................................................ATATTGTACTGTCACAGCAGTA.................................................................................................................... 22 1 25.00 0.00 22.00 3.00 0.00 ......................................................ATATTGCCCTGTCACAGCAGT..................................................................................................................... 21 1 24.00 3.00 3.00 18.00 0.00 ......................................................ATATTGTCCTGTCACACCAGT..................................................................................................................... 21 1 24.00 0.00 2.00 22.00 0.00 ......................................................ATATTGTCCTGTCACAGCACT..................................................................................................................... 21 1 22.00 1.00 6.00 15.00 0.00 ......................................................ATATTGTCCCGTCACAGCAGT..................................................................................................................... 21 1 22.00 2.00 7.00 13.00 0.00 ......................................................ATATTGTCCTGTCAAAGCAGTA.................................................................................................................... 22 1 21.00 0.00 20.00 1.00 0.00 ......................................................ATGTTGTCCTGTCACAGCAGT..................................................................................................................... 21 1 20.00 1.00 4.00 15.00 0.00 ......................................................ATATTGTCCTGGCACAGCAGTA.................................................................................................................... 22 1 20.00 0.00 18.00 2.00 0.00 ......................................................ATATTGTCCTGTCACAGCGGT..................................................................................................................... 21 1 20.00 1.00 5.00 14.00 0.00 ......................................................ATATTGTCCTGTCACAGAAGT..................................................................................................................... 21 1 20.00 1.00 3.00 16.00 0.00 ......................................................ATATTGTCCTGTCACCGCAGT..................................................................................................................... 21 1 20.00 0.00 7.00 13.00 0.00 ......................................................ATATTGTCCTGTCACATCAGT..................................................................................................................... 21 1 20.00 1.00 4.00 15.00 0.00 ......................................................ATATTGTCCTGTCACAGCAGTAT................................................................................................................... 23 1 19.00 0.00 8.00 11.00 0.00 ......................................................ATATTGTCCTGTCATAGCAGTA.................................................................................................................... 22 1 18.00 0.00 17.00 1.00 0.00 ......................................................ATATTGTCCTGTAACAGCAGT..................................................................................................................... 21 1 17.00 0.00 4.00 13.00 0.00 ......................................................ATATTGTCCTGTAACAGCAGTA.................................................................................................................... 22 1 16.00 0.00 15.00 1.00 0.00 ......................................................ATATTGTCCTGTCAAAGCAGT..................................................................................................................... 21 1 16.00 1.00 3.00 12.00 0.00 ......................................................ATATTGTCCTGTCACAGCTGT..................................................................................................................... 21 1 15.00 1.00 5.00 9.00 0.00 ......................................................ATATTGTCCTGTCACAGCTGTA.................................................................................................................... 22 1 15.00 0.00 13.00 2.00 0.00 ......................................................GTATTGTCCTGTCACAGCAGT..................................................................................................................... 21 1 15.00 1.00 1.00 13.00 0.00 ......................................................ATATTGCCCTGTCACAGCAGTA.................................................................................................................... 22 1 15.00 0.00 15.00 0.00 0.00 ......................................................AGATTGTCCTGTCACAGCAGT..................................................................................................................... 21 1 15.00 0.00 1.00 14.00 0.00 .......................................................TATTGTCCTGTCACAGCAGT..................................................................................................................... 20 1 15.00 2.00 5.00 8.00 0.00 ......................................................ATATTGTCTTGTCACAGCAGT..................................................................................................................... 21 1 15.00 1.00 1.00 13.00 0.00 ......................................................ATATTGTCCTGTCACATCAGTA.................................................................................................................... 22 1 14.00 0.00 12.00 2.00 0.00 ......................................................ATATTGACCTGTCACAGCAGTA.................................................................................................................... 22 1 14.00 0.00 13.00 1.00 0.00 ......................................................ATATTGTCCTGTCACAACAGTA.................................................................................................................... 22 1 14.00 0.00 13.00 1.00 0.00 ......................................................ATATTGTCCTGTCACACCAGTA.................................................................................................................... 22 1 14.00 0.00 7.00 7.00 0.00 ......................................................AGATTGTCCTGTCACAGCAGTA.................................................................................................................... 22 1 14.00 0.00 14.00 0.00 0.00 ......................................................ATATTGTCCTGTTACAGCAGTA.................................................................................................................... 22 1 14.00 0.00 14.00 0.00 0.00 ......................................................ATATCGTCCTGTCACAGCAGTA.................................................................................................................... 22 1 14.00 0.00 10.00 4.00 0.00 ......................................................ATATTGACCTGTCACAGCAGT..................................................................................................................... 21 1 13.00 0.00 4.00 9.00 0.00 ......................................................ATACTGTCCTGTCACAGCAGT..................................................................................................................... 21 1 13.00 2.00 1.00 10.00 0.00 ......................................................ATATTGTCCTGTCACAGCGGTA.................................................................................................................... 22 1 13.00 0.00 10.00 3.00 0.00 ......................................................ATATTGTCCTGCCACAGCAGTA.................................................................................................................... 22 1 13.00 0.00 11.00 2.00 0.00 ......................................................ATATTGTCCTGTCGCAGCAGTA.................................................................................................................... 22 1 13.00 0.00 11.00 2.00 0.00 ......................................................ATATTGTCCTGTCACAGAAGTA.................................................................................................................... 22 1 13.00 0.00 11.00 2.00 0.00 ......................................................ATATTATCCTGTCACAGCAGT..................................................................................................................... 21 1 13.00 0.00 4.00 9.00 0.00 ......................................................ATATTGTCCTGTCATAGCAGT..................................................................................................................... 21 1 13.00 1.00 2.00 10.00 0.00 .......................................................TATTGTCCTGTCACAGCAGTA.................................................................................................................... 21 1 13.00 0.00 11.00 2.00 0.00 ......................................................ATATTATCCTGTCACAGCAGTA.................................................................................................................... 22 1 12.00 0.00 12.00 0.00 0.00 ......................................................ATATTCTCCTGTCACAGCAGT..................................................................................................................... 21 1 12.00 1.00 3.00 8.00 0.00 ......................................................ATATTGTCCGGTCACAGCAGT..................................................................................................................... 21 1 12.00 0.00 2.00 10.00 0.00 ......................................................ATAGTGTCCTGTCACAGCAGTA.................................................................................................................... 22 1 12.00 0.00 10.00 2.00 0.00 ......................................................ATAGTGTCCTGTCACAGCAGT..................................................................................................................... 21 1 12.00 0.00 6.00 6.00 0.00 ......................................................ATATTGTACTGTCACAGCAGT..................................................................................................................... 21 1 12.00 1.00 7.00 4.00 0.00 ......................................................ATATTGTTCTGTCACAGCAGT..................................................................................................................... 21 1 12.00 2.00 4.00 6.00 0.00 ......................................................ATATTGTCCTGTCACTGCAGTA.................................................................................................................... 22 1 12.00 0.00 11.00 1.00 0.00 ......................................................ATATTGTCCTATCACAGCAGT..................................................................................................................... 21 1 12.00 0.00 1.00 11.00 0.00 ......................................................ATATTGTCCTCTCACAGCAGTA.................................................................................................................... 22 1 11.00 0.00 10.00 1.00 0.00 ......................................................ATATTGTCCTGTCACAGCCG...................................................................................................................... 20 1 11.00 0.00 1.00 10.00 0.00 ......................................................ATATTGTCCTCTCACAGCAGT..................................................................................................................... 21 1 11.00 1.00 1.00 9.00 0.00 ......................................................ATATTGTCCTGTCACAGTAGTA.................................................................................................................... 22 1 11.00 0.00 9.00 2.00 0.00 ......................................................ATATTGTCCTGTCGCAGCAGT..................................................................................................................... 21 1 11.00 1.00 0.00 10.00 0.00 ............................................................................TTGTAA--CTTAATTATAGCCTA............................................................................................. 21 1 11.00 1.00 9.00 1.00 0.00 ......................................................ATATTGTCCTATCACAGCAGTA.................................................................................................................... 22 1 11.00 0.00 9.00 2.00 0.00 ......................................................ATATTGTCCTTTCACAGCAGT..................................................................................................................... 21 1 11.00 1.00 2.00 8.00 0.00 ......................................................ATATTGTCCCGTCACAGCAGTA.................................................................................................................... 22 1 11.00 0.00 11.00 0.00 0.00 ......................................................ATATTGTCCTGTCACAACAGT..................................................................................................................... 21 1 11.00 0.00 3.00 8.00 0.00 ......................................................ATATTGTCCTGTCACAGCAGTTT................................................................................................................... 23 1 10.00 1.00 0.00 9.00 0.00 ......................................................ATATCGTCCTGTCACAGCAGT..................................................................................................................... 21 1 10.00 2.00 1.00 7.00 0.00 ......................................................ATATTGTCCTGTCCCAGCAGT..................................................................................................................... 21 1 10.00 0.00 1.00 9.00 0.00 ......................................................ATATTGTCCTGTTACAGCAGT..................................................................................................................... 21 1 10.00 0.00 3.00 7.00 0.00 ......................................................ATATTGTCCTGACACAGCAGT..................................................................................................................... 21 1 10.00 1.00 0.00 9.00 0.00 ......................................................ATATTGTCCTTTCACAGCAGTA.................................................................................................................... 22 1 9.00 0.00 7.00 2.00 0.00 ......................................................ATATTGTCCTGTCACGGCAGTA.................................................................................................................... 22 1 9.00 0.00 9.00 0.00 0.00 ......................................................TTATTGTCCTGTCACAGCAGT..................................................................................................................... 21 1 9.00 0.00 0.00 9.00 0.00 ......................................................ATGTTGTCCTGTCACAGCAGTA.................................................................................................................... 22 1 9.00 0.00 7.00 2.00 0.00 ......................................................ATATTGTGCTGTCACAGCAGT..................................................................................................................... 21 1 9.00 0.00 6.00 3.00 0.00 ......................................................ATATTGTCCTGTCACGGCAGT..................................................................................................................... 21 1 9.00 1.00 2.00 6.00 0.00 ......................................................ATATTGTCCTGTCACACCAG...................................................................................................................... 20 1 9.00 0.00 0.00 9.00 0.00 ......................................................ATATTGGCCTGCCACAGCAGT..................................................................................................................... 21 1 9.00 0.00 2.00 7.00 0.00 ......................................................GTATTGTCCTGTCACAGCAGTA.................................................................................................................... 22 1 9.00 0.00 8.00 1.00 0.00 ......................................................ATATTGTCCTGTCACAGCATTA.................................................................................................................... 22 1 9.00 0.00 8.00 1.00 0.00 ......................................................ATATTGTCCTGTCACAGTAGT..................................................................................................................... 21 1 9.00 1.00 1.00 7.00 0.00

droPer1 - 1 hit found